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Ahmadi F, Lackner M. Recent findings in methanotrophs: genetics, molecular ecology, and biopotential. Appl Microbiol Biotechnol 2024; 108:60. [PMID: 38183483 DOI: 10.1007/s00253-023-12978-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 09/08/2023] [Accepted: 10/01/2023] [Indexed: 01/08/2024]
Abstract
The potential consequences for mankind could be disastrous due to global warming, which arises from an increase in the average temperature on Earth. The elevation in temperature primarily stems from the escalation in the concentration of greenhouse gases (GHG) such as CO2, CH4, and N2O within the atmosphere. Among these gases, methane (CH4) is particularly significant in driving alterations to the worldwide climate. Methanotrophic bacteria possess the distinctive ability to employ methane as both as source of carbon and energy. These bacteria show great potential as exceptional biocatalysts in advancing C1 bioconversion technology. The present review describes recent findings in methanotrophs including aerobic and anaerobic methanotroph bacteria, phenotypic characteristics, biotechnological potential, their physiology, ecology, and native multi-carbon utilizing pathways, and their molecular biology. The existing understanding of methanogenesis and methanotrophy in soil, as well as anaerobic methane oxidation and methanotrophy in temperate and extreme environments, is also covered in this discussion. New types of methanogens and communities of methanotrophic bacteria have been identified from various ecosystems and thoroughly examined for a range of biotechnological uses. Grasping the processes of methanogenesis and methanotrophy holds significant importance in the development of innovative agricultural techniques and industrial procedures that contribute to a more favorable equilibrium of GHG. This current review centers on the diversity of emerging methanogen and methanotroph species and their effects on the environment. By amalgamating advanced genetic analysis with ecological insights, this study pioneers a holistic approach to unraveling the biopotential of methanotrophs, offering unprecedented avenues for biotechnological applications. KEY POINTS: • The physiology of methanotrophic bacteria is fundamentally determined. • Native multi-carbon utilizing pathways in methanotrophic bacteria are summarized. • The genes responsible for encoding methane monooxygenase are discussed.
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Affiliation(s)
- Fatemeh Ahmadi
- School of Agriculture and Environment, University of Western Australia, Crawley, 6009, Australia
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tasmania, 7001, Australia
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Kurotani A, Miyamoto H, Kikuchi J. Validation of causal inference data using DirectLiNGAM in an environmental small-scale model and calculation settings. MethodsX 2024; 12:102528. [PMID: 38274701 PMCID: PMC10809110 DOI: 10.1016/j.mex.2023.102528] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Accepted: 12/19/2023] [Indexed: 01/27/2024] Open
Abstract
The development of data science has been needed in environmental fields such as marine, weather, and soil data. In general, the datasets are large in some cases, but they are often small because they contain observation data that the analyses themselves are limited. In such a case, the data are statistically evaluated by increasing or decreasing the levels of factors using differential analysis, resulting in the essential factors are estimated. However, there is no consistent approach to the means of assessing strong associations as a group between factors. Causal inference method has the possibility to output effective results for small data, and the results are expected to provide important information for understanding the potential highly association between factors, not necessarily the inference with big data. Here, we describe essential checkpoints and settings for the calculation by a direct method for learning a linear non-Gaussian structural equation model (DirectLiNGAM) and validation methods for the calculation results by using DirectLiNGAM with small-scale model data as an additional discussion of DirectLiNGAM portion of the related research article. Thus, this study provides the statistical validation methods for the association networks, treatments, and interventions for structural inference as a group of essential factors.•Causal inference with DirectLiNGAM•Validation of correlation coefficient and feature importance•Validation using causal effect object and propensity scores.
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Affiliation(s)
- Atsushi Kurotani
- Research Center for Agricultural Information Technology, National Agriculture and Food Research Organization, Tsukuba, Ibaraki 305-0856, Japan
- Tokyo University of Agriculture and Technology, Koganei, Tokyo 184-0012, Japan
| | - Hirokuni Miyamoto
- Graduate School of Horticulture, Chiba University: Matsudo, Chiba 271-8501, Japan
- RIKEN Center for Integrated Medical Science, Yokohama, Kanagawa 230-0045, Japan
| | - Jun Kikuchi
- RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa 230-0045, Japan
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Her R, Crespin L, Etougbétché J, Groud K, Gnolonfoun M, Chapron A, Evenamia C, Houéménou G, Lurier T, Cappelle J, Dobigny G, Ayral F. Seroprevalence and renal carriage of pathogenic Leptospira in livestock in Cotonou, Benin. Vet Med Sci 2024; 10:e1430. [PMID: 38533755 DOI: 10.1002/vms3.1430] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Revised: 02/20/2024] [Accepted: 03/10/2024] [Indexed: 03/28/2024] Open
Abstract
BACKGROUND Leptospirosis is a zoonotic disease. It is particularly prevalent in tropical countries and has major consequences for human and animal health. In Benin, the disease's epidemiology remains poorly understood, especially in livestock, for which data are lacking. OBJECTIVES To characterise Leptospira seroprevalence and locally circulating serogroups in livestock from Cotonou and to estimate the prevalence of Leptospira renal carriage in cattle. METHODS We conducted a cross-sectional study in February 2020 during which livestock were sampled at an abattoir and in an impoverished city district. We analysed blood samples from 279 livestock animals (i.e. cattle, sheep, goats and pigs) using the microscopic agglutination test. Additionally, samples of renal tissue from 100 cattle underwent 16s rRNA (rrs) real-time PCR analysis. RESULTS For the 131 cattle, 85 sheep, and 50 goats tested, seroprevalence was 18% (95% confidence interval [CI] [12%, 26%]), 9% (95% CI [4%, 17%] and 2% (95% CI [0%, 9%]), respectively, and most of the seropositive animals were associated with 1:100 titres. All 13 pigs were seronegative. Leptospira DNA was found in the renal tissue of 10% (95% CI [5%, 18%]) of the cattle tested (n = 100). Leptospira borgpetersenii was the main species present (n = 7), but Leptospira interrogans (n = 2) and Leptospira kirschneri (n = 1) were also detected. Various serogroups (Canicola, Grippotyphosa, Sejroe, Icterohaemorrhagiae, Pomona, Pyrogenes, Australis and Autumnalis) were detected using microscopic agglutination test without a clear predominance of any of them. CONCLUSIONS These results suggest that abattoir workers and people living in close contact with livestock in poor urban areas are exposed to the risk of Leptospira infection.
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Affiliation(s)
- Rebecca Her
- Unité RS2GP, VetAgro Sup, Université de Lyon, Marcy L'Etoile, France
- UMR EPIA, Université Clermont Auvergne, INRAE, VetAgro Sup, Saint-Genès-Champanelle, France
- UMR EPIA, Université de Lyon, INRAE, VetAgro Sup, Marcy l'Etoile, France
| | - Laurent Crespin
- UMR EPIA, Université Clermont Auvergne, INRAE, VetAgro Sup, Saint-Genès-Champanelle, France
- UMR EPIA, Université de Lyon, INRAE, VetAgro Sup, Marcy l'Etoile, France
| | - Jonas Etougbétché
- Laboratoire de Recherche en Biologie Appliquée, Unité de Recherche sur les Invasions Biologiques, École Polytechnique d'Abomey-Calavi, Université d'Abomey-Calavi, Cotonou, Benin
| | - Karine Groud
- Unité RS2GP, VetAgro Sup, Université de Lyon, Marcy L'Etoile, France
| | - Mathias Gnolonfoun
- Laboratoire de Recherche en Biologie Appliquée, Unité de Recherche sur les Invasions Biologiques, École Polytechnique d'Abomey-Calavi, Université d'Abomey-Calavi, Cotonou, Benin
| | - Audrey Chapron
- Laboratoire des Leptospires et Analyses Vétérinaires, VetAgro Sup, Université de Lyon, Marcy L'Etoile, France
| | - Camille Evenamia
- Laboratoire de Recherche en Biologie Appliquée, Unité de Recherche sur les Invasions Biologiques, École Polytechnique d'Abomey-Calavi, Université d'Abomey-Calavi, Cotonou, Benin
| | - Gualbert Houéménou
- Laboratoire de Recherche en Biologie Appliquée, Unité de Recherche sur les Invasions Biologiques, École Polytechnique d'Abomey-Calavi, Université d'Abomey-Calavi, Cotonou, Benin
| | - Thibaut Lurier
- UMR EPIA, Université Clermont Auvergne, INRAE, VetAgro Sup, Saint-Genès-Champanelle, France
- UMR EPIA, Université de Lyon, INRAE, VetAgro Sup, Marcy l'Etoile, France
| | - Julien Cappelle
- ASTRE, Université Montpellier, CIRAD, INRAE, Montpellier, France
| | - Gauthier Dobigny
- UMR Centre de Biologie pour la Gestion des Populations, Institut de Recherche pour le Développement, CIRAD, INRAE, Montpellier SupAgro, Université Montpellier, Montpellier, France
- Unité Peste, Institut Pasteur de Madagascar, Antananarivo, Madagascar
| | - Florence Ayral
- Unité RS2GP, VetAgro Sup, Université de Lyon, Marcy L'Etoile, France
- Laboratoire des Leptospires et Analyses Vétérinaires, VetAgro Sup, Université de Lyon, Marcy L'Etoile, France
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Zhou XH, Li JJ, Peng PH, He WM. Climate warming impacts chewing Spodoptera litura negatively but sucking Corythucha marmorata positively on native Solidago canadensis. Sci Total Environ 2024; 923:171504. [PMID: 38460690 DOI: 10.1016/j.scitotenv.2024.171504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 02/22/2024] [Accepted: 03/03/2024] [Indexed: 03/11/2024]
Abstract
Insect-plant interactions are among importantly ecological processes, and rapid environmental changes such as temperature and resource fluctuations can disrupt long-standing insect-plant interactions. While individual impacts of climate warming, atmospheric nitrogen (N) deposition, and plant provenance on insect-plant interactions are well studied, their joint effects on insect-plant interactions are less explored in ecologically realistic settings. To this end, we performed five experiments with native and invasive Solidago canadensis populations from home and introduced ranges and two insect herbivores (leaf-chewing Spodoptera litura and sap-sucking Corythucha marmorata) in the context of climate warming and N deposition. We determined leaf defensive traits, feeding preference, and insect growth and development, and quantified the possible associations among climate change, host-plant traits, and insect performance with structural equation modeling. First, native S. canadensis populations experienced higher damage by S. litura but lower damage by C. marmorata than invasive S. canadensis populations in the ambient environment. Second, warming decreased the leaf consumption, growth, and survival of S. litura on native S. canadensis populations, but did not affect these traits on invasive S. canadensis populations; warming increased the number of C. marmorata on native S. canadensis populations via direct facilitation, but decreased that on invasive S. canadensis populations via indirect suppression. Third, N addition enhanced the survival of S. litura on native S. canadensis populations, and its feeding preference and leaf consumption on invasive S. canadensis populations. Finally, warming plus N addition exhibited non-additive effects on insect-plant interactions. Based on these results, we tentatively conclude that climate warming could have contrasting effects on insect-plant interactions depending on host-plant provenance and that the effects of atmospheric N deposition on insects might be relatively weak compared to climate warming. Future studies should focus on the molecular mechanisms underlying these different patterns.
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Affiliation(s)
- Xiao-Hui Zhou
- College of Forestry, Hebei Agricultural University, Baoding, China; Institute of Botany, Chinese Academy of Sciences, Beijing, China; College of Ecology and Environment, Chengdu University of Technology, Chengdu, China
| | - Jing-Ji Li
- College of Ecology and Environment, Chengdu University of Technology, Chengdu, China
| | - Pei-Hao Peng
- Institute of Ecological Resources and Landscape Architecture, Chengdu University of Technology, Chengdu, China
| | - Wei-Ming He
- College of Forestry, Hebei Agricultural University, Baoding, China; Institute of Botany, Chinese Academy of Sciences, Beijing, China; Hebei Urban Forest Health Technology Innovation Center, Baoding, China.
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Yuan J, Peng M, Tang G, Wang Y. Fine root production, mortality, and turnover in response to simulated nitrogen deposition in the subtropical Abies georgei (Orr) forest. Sci Total Environ 2024; 923:171404. [PMID: 38432381 DOI: 10.1016/j.scitotenv.2024.171404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 02/28/2024] [Accepted: 02/29/2024] [Indexed: 03/05/2024]
Abstract
Increased nitrogen deposition has important effects on below-ground ecological processes. Fine roots are the most active part of the root system in terms of physiological activity and the main organs for nutrient and water uptake by plants. However, there is still a limited understanding of how nitrogen deposition affects the fine root dynamics in subtropical Abies georgei (Orr) forests. Consequently, a three-year field experiment was conducted to quantify the effects of three forms of nitrogen sources ((NH4)2SO4, NaNO3, and NH4NO3) at four levels (0, 5, 15, and 30 kg N·ha-1·yr-1) on the fine root dynamics in Abies georgei forests using a randomized block-group experimental design and minirhizotron technique. The first year of nitrogen addition did not affect the first-class fine roots (FR1, 0 < diameter < 0.5 mm) and second-class fine roots (FR2, 0.5 < diameter < 1.0 mm). The next two years of nitrogen addition significantly increased the production, mortality, and turnover of FR1 and FR2; the three year of nitrogen addition did not affect the dynamics of the third- class fine roots (FR3, 1.0 < diameter < 1.5 mm) and fourth- class fine roots (FR4,1.5 < diameter < 2.0 mm). Nitrogen addition positively affected the dynamics of FR1, FR2, FR3 and FR4 by positively affecting the carbon, nitrogen, and phosphorus contents of fine roots and indirectly affecting the soil pH. Increased carbon allocation to FR1 and FR2 may represent a phosphorus acquisition strategy when nitrogen is not the limiting factor. The nitrogen addition forms and levels affected the fine root dynamics in the following orde: NH4NO3 > (NH4)2SO4 > NaNO3 and high nitrogen > medium nitrogen > low nitrogen. The results suggest that the different-diameter fine root dynamics respond differently to different nitrogen addition forms and levels, and linking the different-diameter fine roots to nitrogen deposition is crucial.
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Affiliation(s)
- Jiyou Yuan
- School of Ecology and Environmental Sciences & Yunnan Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming, Yunnan 650091, China.
| | - Mingchun Peng
- School of Ecology and Environmental Sciences & Yunnan Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming, Yunnan 650091, China.
| | - Guoyong Tang
- Institute of Highland Forest Science, Chinese Academy of Forestry, Kunming 650233, China.
| | - Yun Wang
- Shandong Provincial Key Laboratory of Water and Soil Conservation and Environmental Protection, College of Resources and Environment, Linyi University, Linyi 276000, China.
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Gols R, Barden A, Ozden Ö. A comparison of butterfly communities in irrigated and non-irrigated Mediterranean farmlands. Sci Total Environ 2024; 922:171247. [PMID: 38423333 DOI: 10.1016/j.scitotenv.2024.171247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Revised: 02/19/2024] [Accepted: 02/22/2024] [Indexed: 03/02/2024]
Abstract
Irrigation is considered a form of agricultural intensification and is of significant importance in arid and semi-arid regions, such as those in the Mediterranean basin. This region differs substantially from temperate ones, in terms of climate, land-use policies and types of agricultural systems. Therefore, how biodiversity is affected by agricultural intensification may also differ substantially from countries in north-western Europe. We investigated the effect of irrigation on butterfly diversity and abundance at two different spatial scales in an agricultural region in northern Cyprus, an area representative of typical lowland agricultural practices of the Eastern Mediterranean. We investigated how local field-scale management (irrigated vs rain-fed) and the proportion of irrigated land at a larger scale of 0.25 km2 affected the abundance and diversity of butterflies and herbaceous plant species. Butterflies and herbaceous plants were surveyed in field boundaries adjacent to agricultural fields located in paired plots that had contrasting levels of irrigation. Butterflies in the field boundaries along agricultural fields were strongly positively affected by irrigation in the adjacent fields both in terms of abundance and species diversity, whereas the effect of irrigation at the larger scale of the 0.25-km2 plot was less prominent. Species composition of butterflies and plants did not correlate. However, plant abundance and alpha diversity of the vegetation in the field boundaries correlated with both abundance and alpha diversity of the butterflies when the abundance of plants was relatively low, in particular, when grasses were omitted from the data set. Crop species associated with irrigated fields contributed to the observed patterns. Comparing the results of this study with those reported for temperate regions in northwestern Europe reveals that the effectiveness of management schemes on biodiversity depend on biogeographical region, highlighting the risk of making broad assumption on the effectiveness of management strategies on biodiversity.
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Affiliation(s)
- Rieta Gols
- Laboratory of Entomology, Wageningen University & Research, Wageningen, the Netherlands.
| | | | - Özge Ozden
- Department of Landscape Architecture, Faculty of Agriculture, Near East University, Nicosia, Cyprus
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Kong L, Song J, Ru J, Feng J, Hou J, Wang X, Zhang Q, Wang H, Yue X, Zhou Z, Sun D, Zhang J, Li H, Fan Y, Wan S. Nitrogen addition does not alter symmetric responses of soil respiration to changing precipitation in a semi-arid grassland. Sci Total Environ 2024; 921:171170. [PMID: 38402979 DOI: 10.1016/j.scitotenv.2024.171170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2023] [Revised: 02/09/2024] [Accepted: 02/20/2024] [Indexed: 02/27/2024]
Abstract
Concurrent changing precipitation regimes and atmospheric nitrogen (N) deposition can have profound influences on soil carbon (C) cycling. However, how N enrichment regulates the responses of soil C fluxes to increasing variability of precipitation remains elusive. As part of a field precipitation gradient experiment with nine levels of precipitation amounts (-60 %, -45 %, -30 %, -15 %, ambient precipitation, +15 %, +30 %, +45 %, and +60 %) and two levels of N addition (0 and 10 g N m-2 yr-1) in a semi-arid temperate steppe on the Mongolian Plateau, this work was conducted to investigate the responses of soil respiration to decreased and increased precipitation (DP and IP), N addition, and their possible interactions. Averaged over the three years from 2019 to 2021, DP suppressed soil respiration by 16.1 %, whereas IP stimulated it by 27.4 %. Nitrogen addition decreased soil respiration by 7.1 % primarily via reducing microbial biomass C. Soil respiration showed symmetric responses to DP and IP within all the four precipitation variabilities (i.e., 15 %, 30 %, 45 %, and 60 %) under ambient N. Nevertheless, N addition did not alter the symmetric responses of soil respiration to changing precipitation due to the comparable sensitivities of microbial biomass and root growth to DP and IP under the N addition treatment. These findings indicate that intensified precipitation variability does not change but N addition could alleviate soil C releases. The unchanged symmetric responses of soil respiration to precipitation variability under N addition imply that N deposition may not change the response pattern of soil C releases to predicted increases in precipitation variability in grasslands, facilitating the robust projections of ecosystem C cycling under future global change scenarios.
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Affiliation(s)
- Lingjie Kong
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Jian Song
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Jingyi Ru
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Jiayin Feng
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Jiawei Hou
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Xueke Wang
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Qingshan Zhang
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Haidao Wang
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Xiaojing Yue
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Zhenxing Zhou
- International Joint Research Laboratory for Global Change Ecology, School of Life Sciences, Henan University, Kaifeng, Henan 475004, China
| | - Dasheng Sun
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Jiajia Zhang
- International Joint Research Laboratory for Global Change Ecology, School of Life Sciences, Henan University, Kaifeng, Henan 475004, China
| | - Heng Li
- International Joint Research Laboratory for Global Change Ecology, School of Life Sciences, Henan University, Kaifeng, Henan 475004, China
| | - Yongge Fan
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China
| | - Shiqiang Wan
- School of Life Sciences, Institute of Life Science and Green Development, Hebei University, Baoding, Hebei 071002, China.
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Liu T, Chen X, Du M, Sanders CJ, Li C, Tang J, Yang H. Replacing Spartina alterniflora with northward-afforested mangroves has the potential to acquire extra blue carbon. Sci Total Environ 2024; 921:170952. [PMID: 38360327 DOI: 10.1016/j.scitotenv.2024.170952] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 01/17/2024] [Accepted: 02/11/2024] [Indexed: 02/17/2024]
Abstract
Climate change provides an opportunity for the northward expansion of mangroves, and thus, the afforestation of mangroves at higher latitude areas presents an achievable way for coastal restoration, especially where invasive species S. alterniflora needs to be clipped. However, it is unclear whether replacing S. alterniflora with northward-afforested mangroves would benefit carbon sequestration. In the study, we examined the key CO2 and CH4 exchange processes in a young (3 yr) northward-afforested wetland dominated by K. obovata. We also collected soil cores from various ages (3, 15, 30, and 60 years) to analyze the carbon storage characteristics of mangrove stands using a space-for-time substitution approach. Our findings revealed that the young northward mangroves exhibited obvious seasonal variations in net ecosystem CO2 exchange (NEE) and functioned as a moderate carbon sink, with an average annual NEE of -107.9 g C m-2 yr-1. Additionally, the CH4 emissions from the northward mangroves were lower in comparison to natural mangroves, with the primary source being the soil. Furthermore, when comparing the vertical distribution of soil carbon, it became evident that both S. alterniflora and mangroves contributed to organic carbon accumulation in the upper soil layers. Our study also identified a clear correlation that the biomass and carbon stocks of mangroves increased logarithmically with age (R2 = 0.69, p < 0.001). Notably, both vegetation and soil carbon stocks (especially in the deeper layers) of the 15 yr northward mangroves, were markedly higher than those of S. alterniflora. This suggests that replacing S. alterniflora with northward-afforested mangroves is an effective long-term strategy for future coasts to enhance blue carbon sequestration.
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Affiliation(s)
- Tingting Liu
- State Key Laboratory of Estuarine and Coastal Research, Institute of Eco-Chongming, Center for Blue Carbon Science and Technology, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, PR China
| | - Xuechu Chen
- State Key Laboratory of Estuarine and Coastal Research, Institute of Eco-Chongming, Center for Blue Carbon Science and Technology, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, PR China; Shanghai Key Lab for Urban Ecological Processes and Eco-Restoration, School of Ecological and Environmental Sciences, East China Normal University, 500 Dong Chuan Road, Shanghai 200241, PR China; Yangtze Delta Estuarine Wetland Ecosystem Observation and Research Station, Ministry of Education & Shanghai Science and Technology Committee, Shanghai 202162, PR China
| | - Minghui Du
- State Key Laboratory of Estuarine and Coastal Research, Institute of Eco-Chongming, Center for Blue Carbon Science and Technology, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, PR China
| | - Christian J Sanders
- National Marine Science Centre, School of Environment, Science and Engineering, Southern Cross University, Coffs Harbour, NSW 2450, Australia
| | - Changda Li
- Marine and Fisheries Development Research Center, Dongtou District, Wenzhou 325000, PR China
| | - Jianwu Tang
- State Key Laboratory of Estuarine and Coastal Research, Institute of Eco-Chongming, Center for Blue Carbon Science and Technology, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, PR China; Yangtze Delta Estuarine Wetland Ecosystem Observation and Research Station, Ministry of Education & Shanghai Science and Technology Committee, Shanghai 202162, PR China
| | - Hualei Yang
- State Key Laboratory of Estuarine and Coastal Research, Institute of Eco-Chongming, Center for Blue Carbon Science and Technology, East China Normal University, 3663 N. Zhongshan Road, Shanghai 200062, PR China; Yangtze Delta Estuarine Wetland Ecosystem Observation and Research Station, Ministry of Education & Shanghai Science and Technology Committee, Shanghai 202162, PR China.
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9
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Bontrager HL, Hinton TG, Okuda K, Beasley JC. The impact of sampling scale: A comparison of methods for estimating external contaminant exposure in free-ranging wildlife. Sci Total Environ 2024; 921:171012. [PMID: 38369157 DOI: 10.1016/j.scitotenv.2024.171012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Revised: 02/08/2024] [Accepted: 02/14/2024] [Indexed: 02/20/2024]
Abstract
The impacts of contaminants on wildlife are dose dependent, and thus being able to track or predict exposure following contamination events is important for monitoring ecosystem health. However, the ability to track exposure in free-ranging wildlife is often severely limited. Consequently, researchers have predominantly relied on simple methods for estimating contaminant exposures in wildlife with little regard for spatial contaminant heterogeneity or an animal's use of diverse habitats. We evaluated the influence sampling scale (i.e., how finely contaminant distribution and organism's spatial use of the landscape is mapped) has on (1) realism and (2) conservativeness of exposure estimates. To do this, we monitored the actual exposure of wild boar (Sus scrofa) in Fukushima, Japan to radioactive contamination using GPS-coupled contaminant monitors placed on individual animals. We compared empirical exposures to estimates generated by combining varying amounts of information about an individual boar's location and/or movement, with the distribution of contamination on the landscape. We found that the most realistic exposure estimates were produced when finer-scale contaminant distribution surveys (e.g., airborne surveys) were combined with more accurate estimates of an individual's space use (e.g., home ranges or core areas). Importantly, estimates of exposure based on single point surveys at a trap site (a simple method commonly used in the literature), did not correlate with actual exposure rates, suggesting dose-effects studies using this method may result in spurious conclusions. These results suggest that researchers seeking realistic estimates of exposure, such as in dose-effect studies, should ensure they have adequately accounted for fine-scale contaminant distribution patterns and areas of higher use by study organisms. However, conservative estimates of exposure (i.e., intentionally over-predicting exposure as is done in initial tiers of ecological risk analyses) were not as scale sensitive and could be achieved with a single known location and coarse contaminant distribution maps.
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Affiliation(s)
- Helen L Bontrager
- Savannah River Ecology Laboratory, Warnell School of Forestry and Natural Resources, University of Georgia, Aiken, SC 29808, USA
| | - Thomas G Hinton
- Centre of Excellence in Environmental Radioactivity (CERAD), Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, P.O. Box 5003, N-1433 Ås, Norway; Institute of Environmental Radioactivity, 1 Kanayagawa, Fukushima City, Fukushima 960-1296, Japan
| | - Kei Okuda
- Faculty of Human Environmental Sciences, Hiroshima Shudo University, Hiroshima 731-3195, Japan
| | - James C Beasley
- Savannah River Ecology Laboratory, Warnell School of Forestry and Natural Resources, University of Georgia, Aiken, SC 29808, USA.
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10
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Singh JP, Bottos EM, Van Hamme JD, Fraser LH. Microbial composition and function in reclaimed mine sites along a reclamation chronosequence become increasingly similar to undisturbed reference sites. Sci Total Environ 2024; 920:170996. [PMID: 38369136 DOI: 10.1016/j.scitotenv.2024.170996] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Revised: 02/13/2024] [Accepted: 02/13/2024] [Indexed: 02/20/2024]
Abstract
Mine reclamation historically focuses on enhancing plant coverage to improve below and aboveground ecology. However, there is a great need to study the role of soil microorganisms in mine reclamation, particularly long-term studies that track the succession of microbial communities. Here, we investigate the trajectory of microbial communities of mining sites reclaimed between three and 26 years. We used high-throughput amplicon sequencing to characterize the bacterial and fungal communities. We quantified how similar the reclaimed sites were to unmined, undisturbed reference sites and explored the trajectory of microbial communities along the reclamation chronosequence. We also examined the ecological processes that shape the assembly of bacterial communities. Finally, we investigated the functional potential of the microbial communities through metagenomic sequencing. Our results reveal that the reclamation age significantly impacted the community compositions of bacterial and fungal communities. As the reclamation age increases, bacterial and fungal communities become similar to the unmined, undisturbed reference site, suggesting a favorable succession in microbial communities. The bacterial community assembly was also significantly impacted by reclamation age and was primarily driven by stochastic processes, indicating a lesser influence of environmental properties on the bacterial community. Furthermore, our read-based metagenomic analysis showed that the microbial communities' functional potential increasingly became similar to the reference sites. Additionally, we found that the plant richness increased with the reclamation age. Overall, our study shows that both above- and belowground ecological properties of reclaimed mine sites trend towards undisturbed sites with increasing reclamation age. Further, it demonstrates the importance of microbial genomics in tracking the trajectory of ecosystem reclamation.
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Affiliation(s)
- Jay Prakash Singh
- Department of Natural Resource Sciences, Thompson Rivers University, 805 TRU Way, Kamloops, BC V2C 0C8, Canada.
| | - Eric M Bottos
- Department of Biological Sciences, Thompson Rivers University, 805 TRU Way, Kamloops, BC V2C 0C8, Canada
| | - Jonathan D Van Hamme
- Department of Biological Sciences, Thompson Rivers University, 805 TRU Way, Kamloops, BC V2C 0C8, Canada
| | - Lauchlan H Fraser
- Department of Natural Resource Sciences, Thompson Rivers University, 805 TRU Way, Kamloops, BC V2C 0C8, Canada
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11
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Chan SCY, Karczmarski L. Broad-scale impacts of coastal mega-infrastructure project on obligatory inshore delphinids: A cautionary tale from Hong Kong. Sci Total Environ 2024; 920:169753. [PMID: 38181953 DOI: 10.1016/j.scitotenv.2023.169753] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Revised: 12/25/2023] [Accepted: 12/26/2023] [Indexed: 01/07/2024]
Abstract
Inshore marine habitats experience considerable anthropogenic pressure, as this is where many adverse effects of human activities concentrate. In the rapidly-changing seascape of the Anthropocene, Hong Kong waters at the heart of world's fastest developing coastal region can serve as a preview-window into coastal seas of the future, with ever-growing anthropogenic footprint. Here, we quantify how large-scale coastal infrastructure projects can affect obligatory inshore cetaceans, bringing about population-level consequences that may compromise their long-term demographic viability. As a case in point, we look at the construction of world's longest sea crossing system and broad-scale demographic, social and spatial responses it has caused in a shallow-water delphinid, the Indo-Pacific humpback dolphin (Sousa chinensis). Soon after the infrastructure project began, dolphins markedly altered their home range near construction sites such that these waters no longer functioned as dolphin core areas despite the apparent presence of prey, indicating that anthropogenic impacts outweighed foraging benefits. The contraction of key habitats has in turn led individuals to interact over spatially more constricted area, reshaping their group dynamics and social network. Although there was no apparent decline in dolphin numbers that could be detected with mark-recapture estimates, adult survival rates decreased drastically from 0.960 to 0.904, the lowest estimate for these animals anywhere across the region to date, notably below the previously estimated demographic threshold of their long-term persistence (0.955). It is apparent that during an advanced stage of this coastal infrastructure project, dolphins were under a major anthropogenic pressure that, if sustained, could be detrimental to their long-term persistence as a viable demographic unit. As effective conservation of species and habitats depends on informed management decisions, this study offers a valuable lesson in environmental risk assessment, underscoring the implications of human-induced rapid environmental change on obligatory inshore delphinids-sentinels of coastal habitats that are increasingly degraded in fast-changing coastal seas.
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Affiliation(s)
- Stephen C Y Chan
- Division of Cetacean Ecology, Cetacea Research Institute, Lantau, Hong Kong.
| | - Leszek Karczmarski
- Division of Cetacean Ecology, Cetacea Research Institute, Lantau, Hong Kong.
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12
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Wang MZ, Wu J, Zhang SL, Mao LM, Ohi-Toma T, Takano A, Zhang YH, Cameron KM, Li P. Species delimitation in Amana (Liliaceae): transcriptomes battle with evolutionary complexity. Cladistics 2024; 40:135-156. [PMID: 37983640 DOI: 10.1111/cla.12565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Revised: 10/10/2023] [Accepted: 10/18/2023] [Indexed: 11/22/2023] Open
Abstract
Species delimitation has long been a subject of controversy, and there are many alternative concepts and approaches used to define species in plants. The genus Amana (Liliaceae), known as "East Asian tulips" has a number of cryptic species and a huge genome size (1C = 21.48-57.35 pg). It also is intriguing how such a spring ephemeral genus thrives in subtropical areas. However, phylogenetic relationships and species delimitation within Amana are challenging. Here we included all species and 84 populations of Amana, which are collected throughout its distribution range. A variety of methods were used to clarify its species relationships based on a combination of morphological, ecological, genetic, evolutionary and phylogenetic species concepts. This evidence supports the recognition of at least 12 species in Amana. Moreover, we explored the complex evolutionary history within the genus and detected several historical hybridization and introgression events based on phylogenetic trees (transcriptomic and plastid), phylonetworks, admixture and ABBA-BABA analyses. Morphological traits have undergone parallel evolution in the genus. This spring ephemeral genus might have originated from a temperate region, yet finally thrives in subtropical areas, and three hypotheses about its adaptive evolution are proposed for future testing. In addition, we propose a new species, Amana polymorpha, from eastern Zhejiang Province, China. This research also demonstrates that molecular evidence at the genome level (such as transcriptomes) has greatly improved the accuracy and reasonability of species delimitation and taxon classification.
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Affiliation(s)
- Mei-Zhen Wang
- Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou, 310058, Zhejiang, China
| | - Jing Wu
- Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou, 310058, Zhejiang, China
| | - Sheng-Lu Zhang
- Plant Quarantine Station of Lin'an District, Hangzhou, 311300, Zhejiang, China
| | - Li-Mi Mao
- Nanjing Institute of Geology and Palaeontology, Chinese Academy of Sciences, Nanjing, 210008, Jiangsu, China
| | - Tetsuo Ohi-Toma
- Nature Fieldwork Center, Okayama University of Science, Okayama, 700-0005, Japan
| | - Atsuko Takano
- Museum of Nature and Human Activities, Hyogo 6 chome, Yayoigaoka, Sanda, Hyogo, 669-1546, Japan
| | - Yong-Hua Zhang
- College of Life and Environmental Science, Wenzhou University, Wenzhou, 325035, China
| | - Kenneth M Cameron
- Department of Botany, University of Wisconsin, Madison, WI, 53706, USA
| | - Pan Li
- Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou, 310058, Zhejiang, China
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13
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Cusack DF, Christoffersen B, Smith-Martin CM, Andersen KM, Cordeiro AL, Fleischer K, Wright SJ, Guerrero-Ramírez NR, Lugli LF, McCulloch LA, Sanchez-Julia M, Batterman SA, Dallstream C, Fortunel C, Toro L, Fuchslueger L, Wong MY, Yaffar D, Fisher JB, Arnaud M, Dietterich LH, Addo-Danso SD, Valverde-Barrantes OJ, Weemstra M, Ng JC, Norby RJ. Toward a coordinated understanding of hydro-biogeochemical root functions in tropical forests for application in vegetation models. New Phytol 2024; 242:351-371. [PMID: 38416367 DOI: 10.1111/nph.19561] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 01/10/2024] [Indexed: 02/29/2024]
Abstract
Tropical forest root characteristics and resource acquisition strategies are underrepresented in vegetation and global models, hampering the prediction of forest-climate feedbacks for these carbon-rich ecosystems. Lowland tropical forests often have globally unique combinations of high taxonomic and functional biodiversity, rainfall seasonality, and strongly weathered infertile soils, giving rise to distinct patterns in root traits and functions compared with higher latitude ecosystems. We provide a roadmap for integrating recent advances in our understanding of tropical forest belowground function into vegetation models, focusing on water and nutrient acquisition. We offer comparisons of recent advances in empirical and model understanding of root characteristics that represent important functional processes in tropical forests. We focus on: (1) fine-root strategies for soil resource exploration, (2) coupling and trade-offs in fine-root water vs nutrient acquisition, and (3) aboveground-belowground linkages in plant resource acquisition and use. We suggest avenues for representing these extremely diverse plant communities in computationally manageable and ecologically meaningful groups in models for linked aboveground-belowground hydro-nutrient functions. Tropical forests are undergoing warming, shifting rainfall regimes, and exacerbation of soil nutrient scarcity caused by elevated atmospheric CO2. The accurate model representation of tropical forest functions is crucial for understanding the interactions of this biome with the climate.
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Affiliation(s)
- Daniela F Cusack
- Department of Ecosystem Science and Sustainability, Warner College of Natural Resources, Colorado State University, 1231 Libbie Coy Way, A104, Fort Collins, CO, 80523-1476, USA
- Smithsonian Tropical Research Institute, Apartado, Balboa, 0843-03092, Panama
| | - Bradley Christoffersen
- School of Integrative Biological and Chemical Sciences, The University of Texas Rio Grande Valley, Edinburg, TX, 78539, USA
| | - Chris M Smith-Martin
- Department of Plant and Microbial Biology, University of Minnesota, St. Paul, MN, 55108, USA
| | | | - Amanda L Cordeiro
- Department of Ecosystem Science and Sustainability, Warner College of Natural Resources, Colorado State University, 1231 Libbie Coy Way, A104, Fort Collins, CO, 80523-1476, USA
- Smithsonian Tropical Research Institute, Apartado, Balboa, 0843-03092, Panama
| | - Katrin Fleischer
- Department Biogeochemical Signals, Max-Planck-Institute for Biogeochemistry, Hans-Knöll-Straße 10, Jena, 07745, Germany
| | - S Joseph Wright
- Smithsonian Tropical Research Institute, Apartado, Balboa, 0843-03092, Panama
| | - Nathaly R Guerrero-Ramírez
- Silviculture and Forest Ecology of Temperate Zones, Faculty of Forest Sciences and Forest Ecology, University of Göttingen, Gottingen, 37077, Germany
- Centre of Biodiversity and Sustainable Land Use (CBL), University of Göttingen, Gottingen, 37077, Germany
| | - Laynara F Lugli
- School of Life Sciences, Technical University of Munich, Freising, 85354, Germany
| | - Lindsay A McCulloch
- Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford St., Cambridge, MA, 02138, USA
- National Center for Atmospheric Research, National Oceanographic and Atmospheric Agency, 1850 Table Mesa Dr., Boulder, CO, 80305, USA
| | - Mareli Sanchez-Julia
- Department of Ecology and Evolutionary Biology, Tulane University, New Orleans, LA, 70118, USA
| | - Sarah A Batterman
- Smithsonian Tropical Research Institute, Apartado, Balboa, 0843-03092, Panama
- Cary Institute of Ecosystem Studies, Millbrook, NY, 12545, USA
- School of Geography, University of Leeds, Leeds, LS2 9JT, UK
| | - Caroline Dallstream
- Department of Biology, McGill University, 1205 Av. du Docteur-Penfield, Montreal, QC, H3A 1B1, Canada
| | - Claire Fortunel
- AMAP (Botanique et Modélisation de l'Architecture des Plantes et des Végétations), Université de Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, 34398, France
| | - Laura Toro
- Yale Applied Science Synthesis Program, The Forest School at the Yale School of the Environment, Yale University, New Haven, CT, 06511, USA
| | - Lucia Fuchslueger
- Centre for Microbiology and Environmental Systems Science, University of Vienna, Vienna, 1030, Austria
| | - Michelle Y Wong
- Cary Institute of Ecosystem Studies, Millbrook, NY, 12545, USA
- Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, 06511, USA
| | - Daniela Yaffar
- Functional Forest Ecology, Universität Hamburg, Barsbüttel, 22885, Germany
| | - Joshua B Fisher
- Schmid College of Science and Technology, Chapman University, 1 University Drive, Orange, CA, 92866, USA
| | - Marie Arnaud
- Institute of Ecology and Environmental Sciences (IEES), UMR 7618, CNRS-Sorbonne University-INRAE-UPEC-IRD, Paris, 75005, France
- School of Geography, Earth and Environmental Sciences & BIFOR, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK
| | - Lee H Dietterich
- Department of Ecosystem Science and Sustainability, Warner College of Natural Resources, Colorado State University, 1231 Libbie Coy Way, A104, Fort Collins, CO, 80523-1476, USA
- U.S. Army Engineer Research and Development Center, Environmental Laboratory, Vicksburg, MS, 39180, USA
- Department of Biology, Haverford College, Haverford, PA, 19003, USA
| | - Shalom D Addo-Danso
- Forests and Climate Change Division, CSIR-Forestry Research Institute of Ghana, P.O Box UP 63 KNUST, Kumasi, Ghana
| | - Oscar J Valverde-Barrantes
- Department of Biological Sciences, International Center for Tropical Biodiversity, Florida International University, Miami, FL, 33199, USA
| | - Monique Weemstra
- Department of Biological Sciences, International Center for Tropical Biodiversity, Florida International University, Miami, FL, 33199, USA
| | - Jing Cheng Ng
- Nanyang Technological University, Singapore, 639798, Singapore
| | - Richard J Norby
- Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN, 37996, USA
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14
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Barabás G. Parameter Sensitivity of Transient Community Dynamics. Am Nat 2024; 203:473-489. [PMID: 38489777 DOI: 10.1086/728764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2024]
Abstract
AbstractTransient dynamics have always intrigued ecologists, but current rapid environmental change (inducing transients even in previously undisturbed systems) has highlighted their importance more than ever. Here, I introduce a method for analyzing the sensitivity of transient ecological dynamics to parameter perturbations. The question the method answers is: how would the community dynamics have unfolded for some time horizon had the parameters been slightly different? I apply the method to three empirically parameterized models: competition between native forbs and exotic grasses in California, a host-parasitoid system, and an experimental chemostat predator-prey model. These applications showcase the ecological insights one can gain from models using transient sensitivity analysis. First, one can find parameters and their combinations whose perturbations disproportionately affect a system. Second, one can identify particular windows of time during which the predicted deviation from the unperturbed trajectories is especially large and utilize this information for management purposes. Third, there is an inverse relationship between transient and long-term sensitivities whenever the interacting populations are ecologically similar; paradoxically, the smaller the immediate response of the system, the more extreme its long-term response will be.
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15
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Buche L, Bartomeus I, Godoy O. Multitrophic Higher-Order Interactions Modulate Species Persistence. Am Nat 2024; 203:458-472. [PMID: 38489780 DOI: 10.1086/729222] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2024]
Abstract
AbstractEcologists increasingly recognize that interactions between two species can be affected by the density of a third species. How these higher-order interactions (HOIs) affect species persistence remains poorly understood. To explore the effect of HOIs stemming from multiple trophic layers on a plant community composition, we experimentally built a mesocosm with three plants and three pollinator species arranged in a fully nested and modified network structure. We estimated pairwise interactions among plants and between plants and pollinators, as well as HOIs initiated by a plant or a pollinator affecting plant species pairs. Using a structuralist approach, we evaluated the consequences of the statistically supported HOIs on the persistence probability of each of the three competing plant species and their combinations. HOIs substantially redistribute the strength and sign of pairwise interactions between plant species, promoting the opportunities for multispecies communities to persist compared with a non-HOI scenario. However, the physical elimination of a plant-pollinator link in the modified network structure promotes changes in per capita pairwise interactions and HOIs, resulting in a single-species community. Our study provides empirical evidence of the joint importance of HOIs and network structure in determining species persistence within diverse communities.
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16
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Mohanta TK, Mohanta YK, Kaushik P, Kumar J. Physiology, genomics, and evolutionary aspects of desert plants. J Adv Res 2024; 58:63-78. [PMID: 37160225 DOI: 10.1016/j.jare.2023.04.019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2022] [Revised: 04/28/2023] [Accepted: 04/29/2023] [Indexed: 05/11/2023] Open
Abstract
BACKGROUND Despite the exposure to arid environmental conditions across the globe ultimately hampering the sustainability of the living organism, few plant species are equipped with several unique genotypic, biochemical, and physiological features to counter such harsh conditions. Physiologically, they have evolved with reduced leaf size, spines, waxy cuticles, thick leaves, succulent hydrenchyma, sclerophyll, chloroembryo, and photosynthesis in nonfoliar and other parts. At the biochemical level, they are evolved to perform efficient photosynthesis through Crassulacean acid metabolism (CAM) and C4 pathways with the formation of oxaloacetic acid (Hatch-Slack pathway) instead of the C3 pathway. Additionally, comparative genomics with existing data provides ample evidence of the xerophytic plants' positive selection to adapt to the arid environment. However, adding more high-throughput sequencing of xerophyte plant species is further required for a comparative genomic study toward trait discovery related to survival. Learning from the mechanism to survive in harsh conditions could pave the way to engineer crops for future sustainable agriculture. AIM OF THE REVIEW The distinct physiology of desert plants allows them to survive in harsh environments. However, the genomic composition also contributes significantly to this and requires great attention. This review emphasizes the physiological and genomic adaptation of desert plants. Other important parameters, such as desert biodiversity and photosynthetic strategy, are also discussed with recent progress in the field. Overall, this review discusses the different features of desert plants, which prepares them for harsh conditions intending to translate knowledge to engineer plant species for sustainable agriculture. KEY SCIENTIFIC CONCEPTS OF REVIEW This review comprehensively presents the physiology, molecular mechanism, and genomics of desert plants aimed towards engineering a sustainable crop.
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Affiliation(s)
- Tapan Kumar Mohanta
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa 611, Oman.
| | - Yugal Kishore Mohanta
- Dept. of Applied Biology, University of Science and Technology Meghalaya, Baridua, Meghalaya 793101, India
| | - Prashant Kaushik
- Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana, 125004, India
| | - Jitesh Kumar
- Department of Plant and Microbial Biology, University of Minnesota, Saint Paul, MN 55108, United States
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17
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Ardichvili AN, Loeuille N, Lata JC, Barot S. Nitrification Control by Plants and Preference for Ammonium versus Nitrate: Positive Feedbacks Increase Productivity but Undermine Resilience. Am Nat 2024; 203:E128-E141. [PMID: 38489776 DOI: 10.1086/729090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2024]
Abstract
AbstractSome plants, via their action on microorganisms, control soil nitrification (i.e., the transformation of ammonium into nitrate). We model how the covariation between plant control of nitrification and preference for ammonium versus nitrate impacts ecosystem properties such as productivity, nitrogen (N) losses, and overall resilience. We show that the control of nitrification can maximize productivity by minimizing total inorganic N losses. We initially predicted that plants with an ammonium preference should achieve the highest biomass when inhibiting nitrification, and conversely that plants preferring nitrate should achieve the highest biomass by stimulating nitrification. With a parametrization derived from the Lamto savanna (Ivory Coast), we find that productivity is maximal for plants that slightly prefer ammonium and inhibit nitrification. Such situations, however, lead to strong positive feedbacks that can cause abrupt shifts from a highly to a lowly productive ecosystem. The comparison with other parameter sets (Pawnee short-grass prairie [United States], intensively cultivated field, and a hypothetical parameter set in which ammonium is highly volatilized and nitrate inputs are high) shows that strategies yielding the highest biomass may be counterintuitive (i.e., preferring nitrate but inhibiting nitrification). We argue that the level of control yielding the highest productivity depends on ecosystem properties (quantity of N deposition, leaching rates, and baseline nitrification rates), not only preference. Finally, while contrasting N preferences offer, as expected, the possibility of coexistence through niche partitioning, we stress how control of nitrification can be framed as a niche construction process that adds an additional dimension to coexistence conditions.
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Abstract
Given the marked variation in abiotic and biotic conditions between day and night, many species specialise their physical activity to being diurnal or nocturnal, and it was long thought that these strategies were commonly fairly fixed and invariant. The term 'cathemeral', was coined in 1987, when Tattersall noted activity in a Madagascan primate during the hours of both daylight and darkness. Initially thought to be rare, cathemerality is now known to be a quite widespread form of time partitioning amongst arthropods, fish, birds, and mammals. Herein we provide a synthesis of present understanding of cathemeral behaviour, arguing that it should routinely be included alongside diurnal and nocturnal strategies in schemes that distinguish and categorise species across taxa according to temporal niche. This synthesis is particularly timely because (i) the study of animal activity patterns is being revolutionised by new and improved technologies; (ii) it is becoming apparent that cathemerality covers a diverse range of obligate to facultative forms, each with their own common sets of functional traits, geographic ranges and evolutionary history; (iii) daytime and nighttime activity likely plays an important but currently neglected role in temporal niche partitioning and ecosystem functioning; and (iv) cathemerality may have an important role in the ability of species to adapt to human-mediated pressures.
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Affiliation(s)
- Daniel T C Cox
- Environment and Sustainability Institute, University of Exeter, Penryn, Cornwall, TR10 9FE, UK
| | - Kevin J Gaston
- Environment and Sustainability Institute, University of Exeter, Penryn, Cornwall, TR10 9FE, UK
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19
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Abstract
Nutrition profoundly influences the risk for many age-related diseases. Whether nutrition influences human aging biology directly is less clear. Studies in different animal species indicate that reducing food intake ("caloric restriction" [CR]) can increase lifespan and delay the onset of diseases and the biological hallmarks of aging. Obesity has been described as "accelerated aging" and therefore the lifespan and health benefits generated by CR in both aging and obesity may occur via similar mechanisms. Beyond calorie intake, studies based on nutritional geometry have shown that protein intake and the interaction between dietary protein and carbohydrates influence age-related health and lifespan. Studies where animals are calorically restricted by providing free access to diluted diets have had less impact on lifespan than those studies where animals are given a reduced aliquot of food each day and are fasting between meals. This has drawn attention to the role of fasting in health and aging, and exploration of the health effects of various fasting regimes. Although definitive human clinical trials of nutrition and aging would need to be unfeasibly long and unrealistically controlled, there is good evidence from animal experiments that some nutritional interventions based on CR, manipulating dietary macronutrients, and fasting can influence aging biology and lifespan.
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Affiliation(s)
- David G Le Couteur
- Charles Perkins Centre, The University of Sydney, Sydney, Australia
- ANZAC Research Institute, The Concord Hospital, Concord, Australia
| | - David Raubenheimer
- Charles Perkins Centre, The University of Sydney, Sydney, Australia
- School of Life and Environmental Sciences, The University of Sydney, Sydney, Australia
| | - Samantha Solon-Biet
- Charles Perkins Centre, The University of Sydney, Sydney, Australia
- School of Life and Environmental Sciences, The University of Sydney, Sydney, Australia
| | - Rafael de Cabo
- Translational Gerontology Branch, Intramural Research Program, National Institute on Aging (NIH), Baltimore, Maryland, USA
| | - Stephen J Simpson
- Charles Perkins Centre, The University of Sydney, Sydney, Australia
- School of Life and Environmental Sciences, The University of Sydney, Sydney, Australia
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20
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Shang Y, He J, Qiu J, Hu S, Wang X, Zhang T, Wang W, Yuan X, Xu J, Li F. The tolerance of two marine diatoms to diurnal pH fluctuation under dynamic light condition and ocean acidification scenario. Mar Environ Res 2024; 196:106425. [PMID: 38442592 DOI: 10.1016/j.marenvres.2024.106425] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 01/29/2024] [Accepted: 02/25/2024] [Indexed: 03/07/2024]
Abstract
Coastal waters undergo dynamic changes in seawater carbonate chemistry due to natural and anthropogenic factors. Despite this, our current understanding of how coastal phytoplankton respond to fluctuating pH is limited. In the present study, we investigated the physiological responses of two coastal diatoms Thalassiosira pseudonana and Thalassiosira weissflogii to seawater acidification and diurnally fluctuating pH under natural solar irradiance. Seawater acidification did not significantly impact the growth, maximum and effective quantum yield of PSII, and photosynthetic rates of the two species. However, it did increase the maximum relative electron transport rate of T. weissflogii by 11%. Overall, fluctuating pH had neutral or positive effects on both species. It enhanced the light-saturated photosynthetic rate of T. weissflogii by 20% compared to cells grown under seawater acidification condition. Results from the short-term pH exposure experiment revealed that the photosynthetic rates of both species remained unaffected by acute pH changes, indicating their tolerance to varying pH. Nevertheless, it is crucial to consider dynamic pH when predicting changes in primary production in coastal waters, given the interplay of various environmental drivers.
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Affiliation(s)
- Yu Shang
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
| | - Jie He
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
| | - Jingmin Qiu
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
| | - Siyu Hu
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
| | - Xin Wang
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
| | - Tianzhi Zhang
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
| | - Weili Wang
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
| | - Xiaoyue Yuan
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
| | - Juntian Xu
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China
| | - Futian Li
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine Biotechnology, Jiangsu Ocean University, Lianyungang, China; Co-Innovation Center of Jiangsu Marine Bio-industry Technology, Jiangsu Ocean University, Lianyungang, China; Marine Resources Development Institute of Jiangsu, Jiangsu Ocean University, Lianyungang, China.
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21
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Denton KK, Liberman U, Feldman MW. On random conformity bias in cultural transmission of polychotomous traits. Theor Popul Biol 2024; 156:5-11. [PMID: 38142968 DOI: 10.1016/j.tpb.2023.12.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Revised: 10/10/2023] [Accepted: 12/14/2023] [Indexed: 12/26/2023]
Abstract
Mathematical models of conformity and anti-conformity have commonly included a set of simplifying assumptions. For example, (1) there are m=2 cultural variants in the population, (2) naive individuals observe the cultural variants of n=3 adult "role models," and (3) individuals' levels of conformity or anti-conformity do not change over time. Three recent theoretical papers have shown that departures from each of these assumptions can produce new population dynamics. Here, we explore cases in which multiple, or all, of these assumptions are violated simultaneously: namely, in a population with m variants of a trait where conformity (or anti-conformity) occurs with respect to n role models, we study a model in which the conformity rates at each generation are random variables that are independent of the variant frequencies at that generation. For this model a class of symmetric constant equilibria exist, and it is possible that all of these equilibria are simultaneously stochastically locally stable. In such cases, the effect of initial conditions on subsequent evolutionary trajectories becomes very complicated.
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Affiliation(s)
- Kaleda K Denton
- Stanford University, Department of Biology, Stanford, CA 94305, USA
| | - Uri Liberman
- School of Mathematical Sciences, Tel-Aviv University, Tel Aviv, 69978, Israel
| | - Marcus W Feldman
- Stanford University, Department of Biology, Stanford, CA 94305, USA.
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22
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Rutschmann A, Perry C, Le Galliard JF, Dupoué A, Lourdais O, Guillon M, Brusch G, Cote J, Richard M, Clobert J, Miles DB. Ecological responses of squamate reptiles to nocturnal warming. Biol Rev Camb Philos Soc 2024; 99:598-621. [PMID: 38062628 DOI: 10.1111/brv.13037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Revised: 11/27/2023] [Accepted: 11/27/2023] [Indexed: 03/06/2024]
Abstract
Nocturnal temperatures are increasing at a pace exceeding diurnal temperatures in most parts of the world. The role of warmer nocturnal temperatures in animal ecology has received scant attention and most studies focus on diurnal or daily descriptors of thermal environments' temporal trends. Yet, available evidence from plant and insect studies suggests that organisms can exhibit contrasting physiological responses to diurnal and nocturnal warming. Limiting studies to diurnal trends can thus result in incomplete and misleading interpretations of the ability of species to cope with global warming. Although they are expected to be impacted by warmer nocturnal temperatures, insufficient data are available regarding the night-time ecology of vertebrate ectotherms. Here, we illustrate the complex effects of nocturnal warming on squamate reptiles, a keystone group of vertebrate ectotherms. Our review includes discussion of diurnal and nocturnal ectotherms, but we mainly focus on diurnal species for which nocturnal warming affects a period dedicated to physiological recovery, and thus may perturb activity patterns and energy balance. We first summarise the physical consequences of nocturnal warming on habitats used by squamate reptiles. Second, we describe how such changes can alter the energy balance of diurnal species. We illustrate this with empirical data from the asp viper (Vipera aspis) and common wall lizard (Podarcis muralis), two diurnal species found throughout western Europe. Third, we make use of a mechanistic approach based on an energy-balance model to draw general conclusions about the effects of nocturnal temperatures. Fourth, we examine how warmer nights may affect squamates over their lifetime, with potential consequences on individual fitness and population dynamics. We review quantitative evidence for such lifetime effects using recent data derived from a range of studies on the European common lizard (Zootoca vivipara). Finally, we consider the broader eco-evolutionary ramifications of nocturnal warming and highlight several research questions that require future attention. Our work emphasises the importance of considering the joint influence of diurnal and nocturnal warming on the responses of vertebrate ectotherms to climate warming.
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Affiliation(s)
- Alexis Rutschmann
- Station d'Ecologie Théorique et Expérimentale de Moulis, CNRS UAR2029, 02 route du CNRS, Moulis, 09200, France
| | - Constant Perry
- Station d'Ecologie Théorique et Expérimentale de Moulis, CNRS UAR2029, 02 route du CNRS, Moulis, 09200, France
| | - Jean-François Le Galliard
- Sorbonne Université, CNRS, UMR 7618, IRD, INRAE, Institut d'écologie et des sciences de l'environnement (iEES Paris), Tours 44-45, 4 Place Jussieu, Paris, 75005, France
- Département de Biologie, Ecole Normale Supérieure, PSL Research University, CNRS, UMS 3194, Centre de Recherche en écologie expérimentale et Prédictive (CEREEP-Ecotron IleDeFrance), 78 rue du château, Saint-Pierre-Lès-Nemours, 77140, France
| | - Andréaz Dupoué
- Ifremer, Univ Brest, CNRS, IRD, UMR 6539, LEMAR, 1625 Rte de Sainte-Anne, Plouzané, 29280, France
| | - Olivier Lourdais
- Centre d'Etudes Biologiques de Chizé, CNRS UMR 7372-Université de La Rochelle, 405 Route de Prissé la Charrière, Villiers-en-Bois, 79630, France
- School of Life Sciences, Arizona State University, Life Sciences Center Building, 427E Tyler Mall, Tempe, AZ, 85281, USA
| | - Michaël Guillon
- Centre d'Etudes Biologiques de Chizé, CNRS UMR 7372-Université de La Rochelle, 405 Route de Prissé la Charrière, Villiers-en-Bois, 79630, France
- Cistude Nature, Chemin du Moulinat-33185, Le Haillan, France
| | - George Brusch
- Department of Biological Sciences, California State University San Marcos, 333 S. Twin Oaks Valley Rd., San Marcos, CA, 92096, USA
| | - Julien Cote
- Laboratoire Evolution et Diversité Biologique (EDB), UMR5174, Université Toulouse 3 Paul Sabatier, CNRS, IRD, 118 Rte de Narbonne, Toulouse, 31077, France
| | - Murielle Richard
- Station d'Ecologie Théorique et Expérimentale de Moulis, CNRS UAR2029, 02 route du CNRS, Moulis, 09200, France
| | - Jean Clobert
- Station d'Ecologie Théorique et Expérimentale de Moulis, CNRS UAR2029, 02 route du CNRS, Moulis, 09200, France
| | - Donald B Miles
- Department of Biological Sciences, 131 Life Science Building, Ohio University, Athens, OH, 45701, USA
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23
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Wang W, Xu L, Jiang G, Li Z, Bi YH, Zhou ZG. Characterization of a novel γ-type carbonic anhydrase, Sjγ-CA2, in Saccharina japonica: Insights into carbon concentration mechanism in macroalgae. Int J Biol Macromol 2024; 263:130506. [PMID: 38423426 DOI: 10.1016/j.ijbiomac.2024.130506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2023] [Revised: 02/23/2024] [Accepted: 02/26/2024] [Indexed: 03/02/2024]
Abstract
Carbonic anhydrase (CA) is a crucial component of CO2-concentrating mechanism (CCM) in macroalgae. In Saccharina japonica, an important brown seaweed, 11 CAs, including 5 α-, 3 β-, and 3 γ-CAs, have been documented. Among them, one α-CA and one β-CA were localized in the periplasmic space, one α-CA was found in the chloroplast, and one γ-CA was situated in mitochondria. Notably, the known γ-CAs have predominantly been identified in mitochondria. In this study, we identified a chloroplastic γ-type CA, Sjγ-CA2, in S. japonica. Based on the reported amino acid sequence of Sjγ-CA2, the epitope peptide for monoclonal antibody production was selected as 165 Pro-305. After purification and specificity identification, anti-SjγCA2 monoclonal antibody was employed in immunogold electron microscopy. The results illustrated that Sjγ-CA2 was localized in the chloroplasts of both gametophytes and sporophytes of S. japonica. Subsequently, immunoprecipitation coupled with LC-MS/MS analysis revealed that Sjγ-CA2 mainly interacted with photosynthesis-related proteins. Moreover, the first 65 amino acids at N-terminal of Sjγ-CA2 was identified as the chloroplast transit peptide by the transient expression of GFP-SjγCA2 fused protein in tabacco. Real-time PCR results demonstrated an up-regulation of the transcription of Sjγ-CA2 gene in response to high CO2 concentration. These findings implied that Sjγ-CA2 might contribute to minimizing the leakage of CO2 from chloroplasts and help maintaining a high concentration of CO2 around Rubisco.
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Affiliation(s)
- Wen Wang
- Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources Conferred By Ministry of Education, Shanghai Ocean University, Shanghai 201306, China
| | - Ling Xu
- Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources Conferred By Ministry of Education, Shanghai Ocean University, Shanghai 201306, China
| | - Gang Jiang
- Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources Conferred By Ministry of Education, Shanghai Ocean University, Shanghai 201306, China
| | - Zhi Li
- Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources Conferred By Ministry of Education, Shanghai Ocean University, Shanghai 201306, China
| | - Yan-Hui Bi
- Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources Conferred By Ministry of Education, Shanghai Ocean University, Shanghai 201306, China.
| | - Zhi-Gang Zhou
- International Research Center for Marine Biosciences Conferred By Ministry of Science and Technology, Shanghai Ocean University, Shanghai 201306, China.
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24
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Borofsky T, Feldman MW, Ram Y. Cultural transmission, competition for prey, and the evolution of cooperative hunting. Theor Popul Biol 2024; 156:12-21. [PMID: 38191077 DOI: 10.1016/j.tpb.2023.12.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Revised: 12/07/2023] [Accepted: 12/20/2023] [Indexed: 01/10/2024]
Abstract
Although cooperative hunting is widespread among animals, its benefits are unclear. At low frequencies, cooperative hunting may allow predators to escape competition and access bigger prey that could not be caught by a lone cooperative predator. Cooperative hunting is a more successful strategy when it is common, but its spread can result in overhunting big prey, which may have a lower per-capita growth rate than small prey. We construct a one-predator species, two-prey species model in which predators either learn to hunt small prey alone or learn to hunt big prey cooperatively. Predators first learn vertically from parents, then horizontally (i.e. socially) from random individuals or siblings. After horizontal transmission, they hunt with their learning partner if both are cooperative, and otherwise they hunt alone. Cooperative hunting cannot evolve when initially rare unless predators (a) interact with siblings, or (b) horizontally transmit the cooperative behavior to potential hunting partners. Whereas competition for small prey favors cooperative hunting when this cooperation is initially rare, the frequency of cooperative hunting cannot reach 100% unless big prey is abundant. Furthermore, a mutant that increases horizontal learning can invade if cooperative hunting is present, but not at 100%, because horizontal learning allows pairs of predators to have the same strategy. Our results reveal that the interactions between prey availability, social learning, and degree of cooperation among predators may have important effects on ecosystems.
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Affiliation(s)
- Talia Borofsky
- Department of Biology, Stanford University, Stanford, CA, USA
| | | | - Yoav Ram
- School of Zoology, Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel; Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel.
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25
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Jianfang W, Raza SHA, Pant SD, Juan Z, Prakash A, Abdelnour SA, Aloufi BH, Mahasneh ZMH, Amin AA, Shokrollahi B, Zan L. Exploring Epigenetic and Genetic Modulation in Animal Responses to Thermal Stress. Mol Biotechnol 2024:10.1007/s12033-024-01126-5. [PMID: 38528286 DOI: 10.1007/s12033-024-01126-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Accepted: 02/27/2024] [Indexed: 03/27/2024]
Abstract
There is increasing evidence indicating that global temperatures are rising significantly, a phenomenon commonly referred to as 'global warming', which in turn is believed to be causing drastic changes to the global climate. Global warming (GW) directly impacts animal health, reproduction, production, and welfare, presenting several challenges to livestock enterprises. Thermal stress (TS) is one of the key consequences of GW, and all animal species, including livestock, have diverse physiological, epigenetic and genetic mechanisms to respond to TS. As a result, TS can significantly affect an animals' health, immune responsiveness, metabolic pathways etc. which can also influence the productivity, performance, and welfare of animals. Moreover, prolonged exposure to TS can lead to transgenerational and intergenerational changes that are mediated by epigenetic changes. For example, in several animal species, the effects of TS are encoded epigenetically during the animals' growth or productive stage, and these epigenetic changes can be transmitted intergenerationally. Such epigenetic changes can affect animal productivity by changing the phenotype so that it aligns with its ancestors' environment, irrespective of its immediate environment. Furthermore, epigenetic and genetic changes can also help protect cells from the adverse effects of TS by modulating the transcriptional status of heat-responsive genes in animals. This review focuses on the genetic and epigenetic modulation and regulation that occurs in TS conditions via HSPs, histone alterations and DNA methylation.
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Affiliation(s)
- Wang Jianfang
- College of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Sayed Haidar Abbas Raza
- College of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China
- Guangdong Provincial Key Laboratory of Food Quality and Safety/Nation-Local Joint Engineering Research Center for Machining and Safety of Livestock and Poultry Products, South China Agricultural University, Guangzhou, 510642, China
- Guangdong Provincial Key Laboratory of Utilization and Conservation of Food and Medicinal Resources in Northern Region, Shaoguan University, Shaoguan, 512005, China
| | - Sameer D Pant
- Gulbali Institute, Charles Sturt University, Wagga Wagga, NSW, 2678, Australia
| | - Zhao Juan
- College of Animal Science and Technology, South China Agricultural University, Guangzhou, 510642, China
| | - Ajit Prakash
- Department of Biochemistry and Biophysics, University of North Carolina, School of Medicine, Chapel Hill, USA
| | - Sameh A Abdelnour
- Department of Animal Production, Faculty of Agriculture, Zagazig University, Zagazig, 44519, Egypt
| | - Bandar Hamad Aloufi
- Biology Department, Faculty of Science, University of Ha'il, Ha'il, Saudi Arabia
| | - Zeinab M H Mahasneh
- Department of Animal Production, School of Agriculture, University of Jordan, Amman, Jordan
| | - Ahmed A Amin
- Department of Animal Production, Faculty of Agriculture, Cairo University, Giza, Egypt
| | - Borhan Shokrollahi
- Hanwoo Research Institute, National Institute of Animal Science, Pyeongchang-gun, 25340, Republic of Korea
| | - Linsen Zan
- College of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China.
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26
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Talbot E, Jontila JBS, Gonzales BJ, Dolorosa RG, Jose ED, Sajorne R, Sailley S, Kay S, Queirós AM. Incorporating climate-readiness into fisheries management strategies. Sci Total Environ 2024; 918:170684. [PMID: 38320704 DOI: 10.1016/j.scitotenv.2024.170684] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Revised: 01/15/2024] [Accepted: 02/02/2024] [Indexed: 02/10/2024]
Abstract
Tropical oceans are among the first places to exhibit climate change signals, affecting the habitat distribution and abundance of marine fish. These changes to stocks, and subsequent impacts on fisheries production, may have considerable implications for coastal communities dependent on fisheries for food security and livelihoods. Understanding the impacts of climate change on tropical marine fisheries is therefore an important step towards developing sustainable, climate-ready fisheries management measures. We apply an established method of spatial meta-analysis to assess species distribution modelling datasets for key species targeted by the Philippines capture fisheries. We analysed datasets under two global emissions scenarios (RCP4.5 and RCP8.5) and varying degrees of fishing pressure to quantify potential climate vulnerability of the target community. We found widespread responses to climate change in pelagic species in particular, with abundances projected to decline across much of the case study area, highlighting the challenges of maintaining food security in the face of a rapidly changing climate. We argue that sustainable fisheries management in the Philippines in the face of climate change can only be achieved through management strategies that allow for the mitigation of, and adaptation to, pressures already locked into the climate system for the near term. Our analysis may support this, providing fisheries managers with the means to identify potential climate change hotspots, bright spots and refugia, thereby supporting the development of climate-ready management plans.
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Affiliation(s)
- Elizabeth Talbot
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, United Kingdom.
| | - Jean-Beth S Jontila
- College of Fisheries and Aquatic Sciences, Western Philippines University, Puerto Princesa City, Philippines
| | - Benjamin J Gonzales
- College of Fisheries and Aquatic Sciences, Western Philippines University, Puerto Princesa City, Philippines
| | - Roger G Dolorosa
- College of Fisheries and Aquatic Sciences, Western Philippines University, Puerto Princesa City, Philippines
| | - Edgar D Jose
- College of Arts and Sciences, North Eastern Mindanao State University, Lianga, Surigao Del Sur, Philippines
| | - Recca Sajorne
- College of Fisheries and Aquatic Sciences, Western Philippines University, Puerto Princesa City, Philippines
| | - Sevrine Sailley
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, United Kingdom
| | - Susan Kay
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, United Kingdom
| | - Ana M Queirós
- Plymouth Marine Laboratory, Prospect Place, Plymouth PL1 3DH, United Kingdom
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27
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Pessarrodona A, Howard J, Pidgeon E, Wernberg T, Filbee-Dexter K. Carbon removal and climate change mitigation by seaweed farming: A state of knowledge review. Sci Total Environ 2024; 918:170525. [PMID: 38309363 DOI: 10.1016/j.scitotenv.2024.170525] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Revised: 12/31/2023] [Accepted: 01/26/2024] [Indexed: 02/05/2024]
Abstract
The pressing need to mitigate the effects of climate change is driving the development of novel approaches for carbon dioxide removal (CDR) from the atmosphere, with the ocean playing a central role in the portfolio of solutions. The expansion of seaweed farming is increasingly considered as one of the potential CDR avenues among government and private sectors. Yet, comprehensive assessments examining whether farming can lead to tangible climate change mitigation remain limited. Here we examine the results of over 100 publications to synthesize evidence regarding the CDR capacity of seaweed farms and review the different interventions through which an expansion of seaweed farming may contribute to climate change mitigation. We find that presently, the majority of the carbon fixed by seaweeds is stored in short-term carbon reservoirs (e.g., seaweed products) and that only a minority of the carbon ends up in long-term reservoirs that are likely to fit within existing international accounting frameworks (e.g., marine sediments). Additionally, the tiny global area cultivated to date (0.06 % of the estimated wild seaweed extent) limits the global role of seaweed farming in climate change mitigation in the present and mid-term future. A first-order estimate using the best available data suggests that, at present, even in a low emissions scenario, any carbon removal capacity provided by seaweed farms globally is likely to be offset by their emissions (median global balance net emitter: -0.11 Tg C yr-1; range -2.07-1.95 Tg C yr-1), as most of a seaweed farms' energy and materials currently depend on fossil fuels. Enhancing any potential CDR though seaweed farming will thus require decarbonizing of supply chains, directing harvested biomass to long-term carbon storage products, expanding farming outside traditional cultivation areas, and developing robust models tracing the fate of seaweed carbon. This will present novel scientific (e.g., verifying permanence of seaweed carbon), engineering (e.g., developing farms in wave exposed areas), and economic challenges (e.g., increase market demand, lower costs, decarbonize at scale), many of which are only beginning to be addressed.
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Affiliation(s)
- Albert Pessarrodona
- UWA Oceans Institute and School of Biological Sciences, University of Western Australia, Crawley, Western Australia 6009, Australia; Conservation International, Arlington, VA, USA; International Blue Carbon Institute, Singapore.
| | - Jennifer Howard
- Conservation International, Arlington, VA, USA; International Blue Carbon Institute, Singapore
| | - Emily Pidgeon
- Conservation International, Arlington, VA, USA; International Blue Carbon Institute, Singapore
| | - Thomas Wernberg
- UWA Oceans Institute and School of Biological Sciences, University of Western Australia, Crawley, Western Australia 6009, Australia; Institute of Marine Research, His, Norway
| | - Karen Filbee-Dexter
- UWA Oceans Institute and School of Biological Sciences, University of Western Australia, Crawley, Western Australia 6009, Australia; Institute of Marine Research, His, Norway
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28
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Van de Walle J, Sun R, Fay R, Patrick SC, Barbraud C, Delord K, Weimerkirch H, Jenouvrier S. The impact of boldness on demographic rates and life-history outcomes in the wandering albatross. J Anim Ecol 2024. [PMID: 38525860 DOI: 10.1111/1365-2656.14077] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Accepted: 02/06/2024] [Indexed: 03/26/2024]
Abstract
Differences among individuals within a population are ubiquitous. Those differences are known to affect the entire life cycle with important consequences for all demographic rates and outcomes. One source of among-individual phenotypic variation that has received little attention from a demographic perspective is animal personality, which is defined as consistent and heritable behavioural differences between individuals. While many studies have shown that individual variation in individual personality can generate individual differences in survival and reproductive rates, the impact of personality on all demographic rates and outcomes remains to be assessed empirically. Here, we used a unique, long-term, dataset coupling demography and personality of wandering albatross (Diomedea exulans) in the Crozet Archipelago and a comprehensive analysis based on a suite of approaches (capture-mark-recapture statistical models, Markov chains models and structured matrix population models). We assessed the effect of boldness on annual demographic rates (survival, breeding probability, breeding success), life-history outcomes (life expectancy, lifetime reproductive outcome, occupancy times), and an integrative demographic outcome (population growth rate). We found that boldness had little impact on female demographic rates, but was very likely associated with lower breeding probabilities in males. By integrating the effects of boldness over the entire life cycle, we found that bolder males had slightly lower lifetime reproductive success compared to shyer males. Indeed, bolder males spent a greater proportion of their lifetime as non-breeders, which suggests longer inter-breeding intervals due to higher reproductive allocation. Our results reveal that the link between boldness and demography is more complex than anticipated by the pace-of-life literature and highlight the importance of considering the entire life cycle with a comprehensive approach when assessing the role of personality on individual performance and demography.
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Affiliation(s)
- Joanie Van de Walle
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts, USA
- Department of Fisheries and Oceans Canada, Maurice-Lamontagne Institute, Mont-Joli, Quebec, Canada
| | - Ruijiao Sun
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts, USA
- Department of Earth, Atmospheric and Planetary Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
- Marine Science Institute, University of California Santa Barbara, Santa Barbara, California, USA
| | - Rémi Fay
- Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway
- Laboratoire de Biometrie et Biologie Evolutive, UMR CNRS 5558, Université Lyon 1, Villeurbanne, France
| | - Samantha C Patrick
- School of Environmental Sciences, University of Liverpool, Liverpool, UK
| | - Christophe Barbraud
- Centre d'Etudes Biologiques de Chizé, CNRS-La Rochelle University UMR 7372, Villiers en Bois, France
| | - Karine Delord
- Centre d'Etudes Biologiques de Chizé, CNRS-La Rochelle University UMR 7372, Villiers en Bois, France
| | - Henri Weimerkirch
- Centre d'Etudes Biologiques de Chizé, CNRS-La Rochelle University UMR 7372, Villiers en Bois, France
| | - Stephanie Jenouvrier
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts, USA
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29
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Abstract
One of the central research questions in ecology and biogeography revolves around understanding the spatial distribution patterns of organisms, the factors influencing species abundance, and why in certain areas there are more species or individuals than in others. Addressing these questions not only forms the bedrock of scientific research in ecology and evolution but also has critical implications for biodiversity conservation and management. To safeguard species, restore habitats, prevent invasions and anticipate future impacts, it is imperative to identify optimal areas for species or biodiversity under current and future conditions, such as changes in climate or land use. Ecologists have long tried to discern which conditions enable species to maintain viable populations in a given area (Figure 1). Broadly speaking, three main conditions must be met for a species to inhabit a site: successful dispersal throughout its biogeographic history; environmental conditions suitable for sustaining a population; and biotic conditions conducive to species persistence, including resource availability and absence of strong competitors. Ecological niche modelling, also known as species distribution modelling or habitat suitability modelling, primarily focuses on environmental factors, though models are increasingly integrating dispersal and biotic interactions. In the following sections, we will delve into the basic structure and hypotheses of ecological niche modelling, their applications and potential future improvements.
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Affiliation(s)
- Wilfried Thuiller
- University Grenoble Alpes, University Savoie Mont Blanc, CNRS, LECA, Laboratoire d'Ecologie Alpine, F-38000 Grenoble, France.
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30
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van Dis NE, Salis L, Visser ME. Temperature has an overriding role compared to photoperiod in regulating the seasonal timing of winter moth egg hatching. Oecologia 2024:10.1007/s00442-024-05535-w. [PMID: 38521882 DOI: 10.1007/s00442-024-05535-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 02/25/2024] [Indexed: 03/25/2024]
Abstract
To accurately predict species' phenology under climate change, we need to gain a detailed mechanistic understanding of how different environmental cues interact to produce the seasonal timing response. In the winter moth (Operophtera brumata), seasonal timing of egg hatching is strongly affected by ambient temperature and has been under strong climate change-induced selection over the past 25 years. However, it is unclear whether photoperiod received at the egg stage also influences timing of egg hatching. Here, we investigated the relative contribution of photoperiod and temperature in regulating winter moth egg development using two split-brood experiments. We experimentally shifted the photoperiod eggs received by 2-4 weeks compared to the actual calendar date and measured the timing of egg hatching, both at a constant temperature and in combination with two naturally changing temperature treatments - mimicking a cold and a warm year. We found an eight-fold larger effect of temperature compared to photoperiod on egg development time. Moreover, the very small photoperiod effects we found were outweighed by both between- and within-clutch variation in egg development time. Thus, we conclude that photoperiod received at the egg stage does likely not play a substantial role in regulating the seasonal timing of egg hatching in the winter moth. These insights into the regulatory mechanism of seasonal timing could have important implications for predicting insect climate change adaptation, as we might expect different targets of selection depending on the relative contribution of different environmental cues.
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Affiliation(s)
- Natalie E van Dis
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB, Wageningen, The Netherlands.
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, 9747 AG, Groningen, The Netherlands.
- Helsinki Institute of Life Science, University of Helsinki, P.O. Box 4, 00014, Helsinki, Finland.
| | - Lucia Salis
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB, Wageningen, The Netherlands
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, 9747 AG, Groningen, The Netherlands
| | - Marcel E Visser
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB, Wageningen, The Netherlands
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, 9747 AG, Groningen, The Netherlands
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31
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Bofa A, Zewotir T. Key predictors of food security and nutrition in Africa: a spatio-temporal model-based study. BMC Public Health 2024; 24:885. [PMID: 38519902 DOI: 10.1186/s12889-024-18368-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Accepted: 03/15/2024] [Indexed: 03/25/2024] Open
Abstract
There is voluminous literature on Food Security in Africa. This study explicitly considers the spatio-temporal factors in addition to the usual FAO-based metrics in modeling and understanding the dynamics of food security and nutrition across the African continent. To better understand the complex trajectory and burden of food insecurity and nutrition in Africa, it is crucial to consider space-time factors when modeling and interpreting food security. The spatio-temporal anova model was found to be superior(employing statistical criteria) to the other three models from the spatio-temporal interaction domain models. The results of the study suggest that dietary supply adequacy, food stability, and consumption status are positively associated with severe food security, while average food supply and environmental factors have negative effects on Food Security and Nutrition. The findings also indicate that severe food insecurity and malnutrition are spatially and temporally correlated across the African continent. Spatio-temporal modeling and spatial mapping are essential components of a comprehensive practice to reduce the burden of severe food insecurity. likewise, any planning and intervention to improve the average food supply and environment to promote sustainable development should be regional instead of one size fit all.
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Affiliation(s)
- Adusei Bofa
- School of Mathematics, Statistics and Computer Science, University of KwaZulu-Natal, Westville campus, Durban, South Africa.
| | - Temesgen Zewotir
- School of Mathematics, Statistics, and Computer Science, University of KwaZulu Natal, Westville campus, Oliver Tambo Building, Durban, South Africa
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32
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Hafker P, Thompson LM, Walter JA, Parry D, Grayson KL. Geographic variation in larval cold tolerance and exposure across the invasion front of a widely established forest insect. Insect Sci 2024. [PMID: 38516807 DOI: 10.1111/1744-7917.13358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2023] [Revised: 02/20/2024] [Accepted: 02/28/2024] [Indexed: 03/23/2024]
Abstract
Under global climate change, high and low temperature extremes can drive shifts in species distributions. Across the range of a species, thermal tolerance is based on acclimatization, plasticity, and may undergo selection, shaping resilience to temperature stress. In this study, we measured variation in cold temperature tolerance of early instar larvae of an invasive forest insect, Lymantria dispar dispar L. (Lepidoptera: Erebidae), using populations sourced from a range of climates within the current introduced range in the Eastern United States. We tested for population differences in chill coma recovery (CCR) by measuring recovery time following a period of exposure to a nonlethal cold temperature in 2 cold exposure experiments. A 3rd experiment quantified growth responses after CCR to evaluate sublethal effects. Our results indicate that cold tolerance is linked to regional climate, with individuals from populations sourced from colder climates recovering faster from chill coma. While this geographic gradient is seen in many species, detecting this pattern is notable for an introduced species founded from a single point-source introduction. We demonstrate that the cold temperatures used in our experiments occur in nature during cold spells after spring egg hatch, but impacts to growth and survival appear low. We expect that population differences in cold temperature performance manifest more from differences in temperature-dependent growth than acute exposure. Evaluating intraspecific variation in cold tolerance increases our understanding of the role of climatic gradients on the physiology of an invasive species, and contributes to tools for predicting further expansion.
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Affiliation(s)
- Petra Hafker
- Department of Biology, University of Richmond, Richmond, VA, USA
- Department of Entomology, Cornell University, Ithaca, NY, USA
| | - Lily M Thompson
- Department of Biology, University of Richmond, Richmond, VA, USA
- Department of Forestry and Environmental Conservation, Clemson University, Clemson, SC, USA
| | - Jonathan A Walter
- Department of Biology, University of Richmond, Richmond, VA, USA
- Department of Environmental Sciences, University of Virginia, Charlottesville, VA, USA
| | - Dylan Parry
- Department of Environmental Biology, State University of New York, College of Environmental Science and Forestry, Syracuse, NY, USA
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Ravikanthachari N, Steward RA, Boggs CL. Patterns of genetic variation and local adaptation of a native herbivore to a lethal invasive plant. Mol Ecol 2024:e17326. [PMID: 38515231 DOI: 10.1111/mec.17326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Revised: 12/03/2023] [Accepted: 02/19/2024] [Indexed: 03/23/2024]
Abstract
Understanding the evolutionary processes that influence fitness is critical to predicting species' responses to selection. Interactions among evolutionary processes including gene flow, drift and the strength of selection can lead to either local adaptation or maladaptation, especially in heterogenous landscapes. Populations experiencing novel environments or resources are ideal for understanding the mechanisms underlying adaptation or maladaptation, specifically in locally co-evolved interactions. We used the interaction between a native herbivore that oviposits on a patchily distributed introduced plant that in turn causes significant mortality to the larvae to test for signatures of local adaptation in areas where the two co-occurred. We used whole-genome sequencing to explore population structure, patterns of gene flow and signatures of local adaptation. We found signatures of local adaptation in response to the introduced plant in the absence of strong population structure with no genetic differentiation and low genetic variation. Additionally, we found localized allele frequency differences within a single population between habitats with and without the lethal plant, highlighting the effects of strong selection. Finally, we identified that selection was acting on larval ability to feed on the plant rather than on females' ability to avoid oviposition, thus uncovering the specific ontogenetic target of selection. Our work highlights the potential for adaptation to occur in a fine-grained landscape in the presence of gene flow and low genetic variation.
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Affiliation(s)
- Nitin Ravikanthachari
- Department of Biological Sciences, University of South Carolina, Columbia, South Carolina, USA
- Rocky Mountain Biological Laboratory, Crested Butte, Colorado, USA
| | - Rachel A Steward
- Department of Biological Sciences, University of South Carolina, Columbia, South Carolina, USA
- Rocky Mountain Biological Laboratory, Crested Butte, Colorado, USA
- Department of Biology, Lund University, Lund, Sweden
| | - Carol L Boggs
- Department of Biological Sciences, University of South Carolina, Columbia, South Carolina, USA
- Rocky Mountain Biological Laboratory, Crested Butte, Colorado, USA
- School of Earth, Ocean & Environment, University of South Carolina, Columbia, South Carolina, USA
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Elmberg J, Palmheden L, Edelstam C, Hagman M, Kärvemo S. Climate change-induced shifts in survival and size of the worlds' northernmost oviparous snake: A 68-year study. PLoS One 2024; 19:e0300363. [PMID: 38512897 PMCID: PMC10956784 DOI: 10.1371/journal.pone.0300363] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Accepted: 02/26/2024] [Indexed: 03/23/2024] Open
Abstract
Because of their dependence on ambient temperature ectothermic animals can serve as sentinels of conservation problems related to global warming. Reptiles in temperate areas are especially well suited to study such effects, as their annual and daily activity patterns directly depend on ambient temperature. This study is based on annual data spanning 68 years from a fringe population of Grass Snakes (Natrix natrix), which is the world's northernmost oviparous (egg-laying) reptile, and known to be constrained by temperature for reproduction, morphology, and behavior. Mark-recapture analyses showed that survival probability was generally higher in males than in females, and that it increased with body length. Body condition (scaled mass index) and body length increased over time, indicative of a longer annual activity period. Monthly survival was generally higher during winter (i.e., hibernation) than over the summer season. Summer survival increased over time, whilst winter survival decreased, especially during recent decades. Winter survival was lower when annual maximum snow depth was less than 15 cm, implying a negative effect of milder winters with less insulating snow cover. Our study demonstrates long-term shifts in body length, body condition and seasonal survival associated with a warming climate. Although the seasonal changes in survival ran in opposite directions and though changes were small in absolute terms, the trends did not cancel out, but total annual survival decreased. We conclude that effects of a warming climate can be diverse and pose a threat for thermophilic species in temperate regions, and that future studies should consider survival change by season, preferably in a long-term approach.
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Affiliation(s)
- Johan Elmberg
- Department of Environmental Science, Kristianstad University, Kristianstad, Sweden
| | - Ludvig Palmheden
- Department of Environmental Monitoring and Research, Swedish Museum of Natural History, Stockholm, Sweden
| | - Carl Edelstam
- Department of Zoology, Swedish Museum of Natural History, Stockholm, Sweden
| | - Mattias Hagman
- Department of Zoology, Stockholm University, Stockholm, Sweden
| | - Simon Kärvemo
- Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden
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Grossman JJ, Coe HB, Fey O, Fraser N, Salaam M, Semper C, Williamson CG. Temperate woody species across the angiosperm phylogeny acquire tolerance to water deficit stress during the growing season. New Phytol 2024. [PMID: 38511237 DOI: 10.1111/nph.19692] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Accepted: 03/03/2024] [Indexed: 03/22/2024]
Abstract
Understanding the capacity of temperate trees to acclimate to limited soil water has become essential in the face of increasing drought risk due to climate change. We documented seasonal - or phenological - patterns in acclimation to water deficit stress in stems and leaves of tree species spanning the angiosperm phylogeny. Over 3 yr of field observations carried out in two US arboreta, we measured stem vulnerability to embolism (36 individuals of 7 Species) and turgor loss point (119 individuals of 27 species) over the growing season. We also conducted a growth chamber experiment on 20 individuals of one species to assess the mechanistic relationship between soil water restriction and acclimation. In three-quarters of species measured, plants became less vulnerable to embolism and/or loss of turgor over the growing season. We were able to stimulate this acclimatory effect by withholding water in the growth chamber experiment. Temperate angiosperms are capable of acclimation to soil water deficit stress, showing maximum vulnerability to soil water deficits following budbreak and becoming more resilient to damage over the course of the growing season or in response to simulated drought. The species-specific tempo and extent of this acclimatory potential constitutes preadaptive climate change resilience.
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Affiliation(s)
- Jake J Grossman
- Biology Department & Environmental Studies Department, St. Olaf College, 1520 St Olaf Ave, Northfield, MN, 55057, USA
| | - Henry B Coe
- Environmental Permitting and Planning Group, Hazen and Sawyer 498 Seventh Ave #11, New York, NY, 10018, USA
| | - Olivia Fey
- Biology Department, Swarthmore College, 500 College Ave, Swarthmore, PA, 19081, USA
| | - Natalie Fraser
- Biology Department, Swarthmore College, 500 College Ave, Swarthmore, PA, 19081, USA
| | - Musa Salaam
- Wilmer Eye Institute, Bayview Medical Center, Johns Hopkins University, 4940 Eastern Ave, Baltimore, MD, 21224, USA
| | - Chelsea Semper
- Department of Forest Resources, University of Minnesota, 115 Green Hall, 1530 Cleveland Ave N, St. Paul, MN, 55108, USA
| | - Ceci G Williamson
- Biology Department, Swarthmore College, 500 College Ave, Swarthmore, PA, 19081, USA
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Wang W, Du J, He Z, Miao C, Wu J, Ma D, Zhao P. Pollinator peaking earlier than flowering is more detrimental to plant fecundity. Sci Total Environ 2024; 917:170458. [PMID: 38290677 DOI: 10.1016/j.scitotenv.2024.170458] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Revised: 12/19/2023] [Accepted: 01/24/2024] [Indexed: 02/01/2024]
Abstract
Climate change has caused asynchronous phenological shifts between most plants and their pollinators, resulting in an earlier or later appearance of peak flowering relative to peak pollinator abundance. The fitness impact of these two mismatch patterns may not be simply equivalent, but the information has so far been limited. To explore how differently plant fitness responds to the distinct mismatch patterns, we conducted a seed-setting comparative study at the individual level in an alpine grassland community in the Qilian Mountains of China. By monitoring flowering abundance and insect visits, we measured the phenological matching relationship between plants and their key pollinators, and evaluated the impact of mismatches on plant productivity. We found that the pattern of "pollinator peaks earlier" accounted for a relatively high proportion in the natural community, with a significantly stronger fitness impact on plants than that of the "flower peaks earlier" pattern. The asymmetry in the fitness impacts between phenological mismatch patterns is related to the length of flowering period. Specially, the shorter the flowering duration, the greater the difference in influence between the two patterns. Our results suggest that plants with shorter flowering periods may be confronted with more severe pollination limitations if climate warming cause insects to forage further ahead. Therefore, the asymmetric effects of phenological mismatch patterns should be considered in phenological models to improve the predictive performance of plant responses to climate change.
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Affiliation(s)
- Wen Wang
- Linze Inland River Basin Research Station, Chinese Ecosystem Research Network, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jun Du
- Linze Inland River Basin Research Station, Chinese Ecosystem Research Network, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China.
| | - Zhibin He
- Linze Inland River Basin Research Station, Chinese Ecosystem Research Network, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China.
| | - Chenxin Miao
- Linze Inland River Basin Research Station, Chinese Ecosystem Research Network, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Juanjuan Wu
- Linze Inland River Basin Research Station, Chinese Ecosystem Research Network, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Dengke Ma
- Linze Inland River Basin Research Station, Chinese Ecosystem Research Network, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Peng Zhao
- School of Computer Science, Huainan Normal University, Anhui 232038, China
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37
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Kriengwatana BP, Marshall CJ, Stevenson T, Monaghan P. Early life conditions reduce similarity between reproductive partners in HPA axis response to stress. Horm Behav 2024; 162:105508. [PMID: 38513527 DOI: 10.1016/j.yhbeh.2024.105508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 02/05/2024] [Accepted: 02/14/2024] [Indexed: 03/23/2024]
Abstract
Social environments modulate endocrine function, yet it is unclear whether individuals can become like their social partners in how they physiologically respond to stressors. This social transmission of hypothalamic-pituitary-adrenal (HPA) axis reactivity could have long-term consequences for health and lifespan of individuals if their social partners react to stressors with an exaggerated HPA axis response. We tested whether glucocorticoid levels in response to stress of breeding partners changes after breeding depending on whether partners had similar or dissimilar postnatal conditions. We manipulated postnatal conditions by mimicking early life stress in zebra finch chicks (Taeniopygia guttata) via postnatal corticosterone exposure. When they reached adulthood, we created breeding pairs where the female and male had experienced either the same or different early life hormonal treatment (corticosterone or control). Before and after breeding, we obtained blood samples within 3 min and after 10 min or 30 min of restraint stress (baseline, cort10, cort30). We found that corticosterone levels of individuals in response to restraint were affected by their own and their partner's early life conditions, but did not change after breeding. However, across all pairs, partners became more similar in cort30 levels after breeding, although differences between partners in cort10 remained greater in pairs with a corticosterone-treated female. Thus, we show that HPA axis response to stressors in adulthood can be modulated by reproductive partners and that similarity between partners is reduced when females are postnatally exposed to elevated glucocorticoids.
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Affiliation(s)
- Buddhamas P Kriengwatana
- Institute for Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, UK.
| | - Christopher J Marshall
- Institute for Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, UK.
| | - Tyler Stevenson
- Institute for Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, UK.
| | - Pat Monaghan
- Institute for Biodiversity, Animal Health and Comparative Medicine, University of Glasgow, Glasgow, UK.
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38
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Collart F, Kiebacher T, Quetsch M, Broennimann O, Guisan A, Vanderpoorten A. To what extent can we predict variation of bryophyte and tracheophyte community composition at fine spatial scale along an elevation gradient? Sci Total Environ 2024; 926:171741. [PMID: 38508261 DOI: 10.1016/j.scitotenv.2024.171741] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 03/14/2024] [Accepted: 03/14/2024] [Indexed: 03/22/2024]
Abstract
Mounting evidence points to the need for high-resolution climatic data in biodiversity analyses under global change. As we move to finer resolution, other factors than climate, including other abiotic variables and biotic interactions play, however, an increasing role, raising the question of our ability to predict community composition at fine scales. Focusing on two lineages of land plants, bryophytes and tracheophytes, we determine the relative contribution of climatic, non-climatic environmental drivers, spatial effects, community architecture and composition of one lineage to predict community composition of the other lineage, and how our ability to predict community composition varies along an elevation gradient. The relationship between community composition of one lineage and 68 environmental variables at 2-25 m spatial resolution, architecture and composition of the other lineage, and spatial factors, was investigated by hierarchical and variance partitioning across 413 2x2m plots in the Swiss Alps. Climatic data, although significant, contributed less to the model than any other variable considered. Community composition of one lineage, reflecting both direct interactions and unmeasured (hidden) abiotic factors, was the best predictor of community composition of the other lineage. Total explained variance substantially varied with elevation, underlining the fact that the strength of the species composition-environment relationship varies depending on environmental conditions. Total variance explained increased towards high elevation up to 50 %, with an increasing importance of spatial effects and vegetation architecture, pointing to increasing positive interactions and aggregated species distribution patterns in alpine environments. In tracheophytes, an increase of the contribution of non-climatic environmental factors was also observed at high elevation, in line with the hypothesis of a stronger environmental control under harsher conditions. Further improvements of our ability to predict changes in plant community composition may involve the implementation of historical variables and higher-resolution climatic data to better describe the microhabitat conditions actually experienced by organisms.
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Affiliation(s)
- Flavien Collart
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.
| | - Thomas Kiebacher
- Department of Botany, Stuttgart State Museum of Natural History, Stuttgart, Germany; Department of Systematic and Evolutionary Botany, University of Zurich, Zürich, Switzerland
| | - Marion Quetsch
- Institute of Botany, University of Liège, Liège, Belgium
| | - Olivier Broennimann
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland; Institute of Earth Surface Dynamics, University of Lausanne, Lausanne, Switzerland
| | - Antoine Guisan
- Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland; Institute of Earth Surface Dynamics, University of Lausanne, Lausanne, Switzerland; Interdisciplinary Center for Mountain Research, University of Lausanne, Lausanne, Switzerland
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39
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Puchi PF, Dalmonech D, Vangi E, Battipaglia G, Tognetti R, Collalti A. Contrasting patterns of water use efficiency and annual radial growth among European beech forests along the Italian peninsula. Sci Rep 2024; 14:6526. [PMID: 38499662 DOI: 10.1038/s41598-024-57293-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Accepted: 03/16/2024] [Indexed: 03/20/2024] Open
Abstract
Tree mortality and forest dieback episodes are increasing due to drought and heat stress. Nevertheless, a comprehensive understanding of mechanisms enabling trees to withstand and survive droughts remains lacking. Our study investigated basal area increment (BAI), and δ13C-derived intrinsic water-use-efficiency (iWUE), to elucidate beech resilience across four healthy stands in Italy with varying climates and soil water availability. Additionally, fist-order autocorrelation (AR1) analysis was performed to detect early warning signals for potential tree dieback risks during extreme drought events. Results reveal a negative link between BAI and vapour pressure deficit (VPD), especially in southern latitudes. After the 2003 drought, BAI decreased at the northern site, with an increase in δ13C and iWUE, indicating conservative water-use. Conversely, the southern sites showed increased BAI and iWUE, likely influenced by rising CO2 and improved water availability. In contrast, the central site sustained higher transpiration rates due to higher soil water holding capacity (SWHC). Despite varied responses, most sites exhibited reduced resilience to future extreme events, indicated by increased AR1. Temperature significantly affected beech iWUE and BAI in northern Italy, while VPD strongly influenced the southern latitudes. The observed increase in BAI and iWUE in southern regions might be attributed to an acclimation response.
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Affiliation(s)
- Paulina F Puchi
- Forest Modelling Lab., Institute for Agriculture and Forestry Systems in the Mediterranean, National Research Council of Italy (CNR-ISAFOM), Via Madonna Alta 128, 06128, Perugia, Italy.
- Institute of Bioeconomy, Italian National Research Council (CNR-IBE), Via Madonna del Piano 10, 50019, Sesto Fiorentino, Italy.
| | - Daniela Dalmonech
- Forest Modelling Lab., Institute for Agriculture and Forestry Systems in the Mediterranean, National Research Council of Italy (CNR-ISAFOM), Via Madonna Alta 128, 06128, Perugia, Italy
- National Biodiversity Future Center (NBFC), 90133, Palermo, Italy
| | - Elia Vangi
- Forest Modelling Lab., Institute for Agriculture and Forestry Systems in the Mediterranean, National Research Council of Italy (CNR-ISAFOM), Via Madonna Alta 128, 06128, Perugia, Italy
| | - Giovanna Battipaglia
- Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania 'L. Vanvitelli', Caserta, Italy
| | - Roberto Tognetti
- Faculty of Agricultural, Environmental and Food Sciences, Free University of Bozen-Bolzano, Piazza Università 1, 39100, Bolzano, Italy
| | - Alessio Collalti
- Forest Modelling Lab., Institute for Agriculture and Forestry Systems in the Mediterranean, National Research Council of Italy (CNR-ISAFOM), Via Madonna Alta 128, 06128, Perugia, Italy
- National Biodiversity Future Center (NBFC), 90133, Palermo, Italy
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40
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Wang S, Hong P, Adler PB, Allan E, Hautier Y, Schmid B, Spaak JW, Feng Y. Towards mechanistic integration of the causes and consequences of biodiversity. Trends Ecol Evol 2024:S0169-5347(24)00054-5. [PMID: 38503639 DOI: 10.1016/j.tree.2024.02.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Revised: 02/21/2024] [Accepted: 02/23/2024] [Indexed: 03/21/2024]
Abstract
The global biodiversity crisis has stimulated decades of research on three themes: species coexistence, biodiversity-ecosystem functioning relationships (BEF), and biodiversity-ecosystem functional stability relationships (BEFS). However, studies on these themes are largely independent, creating barriers to an integrative understanding of the causes and consequences of biodiversity. Here we review recent progress towards mechanistic integration of coexistence, BEF, and BEFS. Mechanisms underlying the three themes can be linked in various ways, potentially creating either positive or negative relationships between them. That said, we generally expect positive associations between coexistence and BEF, and between BEF and BEFS. Our synthesis represents an initial step towards integrating causes and consequences of biodiversity; future developments should include more mechanistic approaches and broader ecological contexts.
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Affiliation(s)
- Shaopeng Wang
- Key Laboratory for Earth Surface Processes of the Ministry of Education, Institute of Ecology, College of Urban and Environmental Science, Peking University, Beijing 100871, China.
| | - Pubin Hong
- Key Laboratory for Earth Surface Processes of the Ministry of Education, Institute of Ecology, College of Urban and Environmental Science, Peking University, Beijing 100871, China
| | - Peter B Adler
- Department of Wildland Resources and the Ecology Center, Utah State University, Logan, UT 84322, USA
| | - Eric Allan
- Institute of Plant Sciences, University of Bern, Altenbergrain 21, 3013 Bern, Switzerland; Centre for Development and Environment, University of Bern, Mittelstrasse 43, Bern 3012, Switzerland
| | - Yann Hautier
- Ecology and Biodiversity Group, Department of Biology, Utrecht University, Padualaan 8, 3584, CH, Utrecht, The Netherlands
| | - Bernhard Schmid
- Remote Sensing Laboratories, Department of Geography, University of Zurich, Winterthurerstrasse 190, CH-8057 Zurich, Switzerland
| | - Jurg W Spaak
- Landscape ecology, RPTU Kaiserslautern Landau, 76829 Landau, Germany
| | - Yanhao Feng
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, China
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41
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Ye ZM, He YD, Bergamo PJ, Orr MC, Huang W, Jin XF, Lun HN, Wang QF, Yang CF. Floral resource partitioning of coexisting bumble bees: Distinguishing species-, colony-, and individual-level effects. Ecology 2024:e4284. [PMID: 38494344 DOI: 10.1002/ecy.4284] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 10/19/2023] [Accepted: 02/01/2024] [Indexed: 03/19/2024]
Abstract
Resource partitioning is considered a key factor in alleviating competitive interactions, enabling coexistence among consumer species. However, most studies have focused on resource partitioning between species, ignoring the potentially critical role of intraspecific variation in resource use. We investigated floral resource partitioning across species, colonies, and individuals in a species-rich bumblebee community in the diversification center of bumblebees. We used a total of 10,598 bumblebees belonging to 13 species across 5 years in the Hengduan Mountains of southwest China. First, we evaluated the influence of a comprehensive set of floral traits, including both those related to attractiveness (flower color and shape) and rewards (pollen, sugar ratio, nectar volume, sugar concentration, and amino acid content) on resource partitioning at the species level in bumblebee-plant networks. Then, we explored intraspecific resource partitioning on the colony and individual levels. Our results suggest that bumblebee species differ substantially in their use of the available floral resources, and that this mainly depends on flower attractiveness (floral color and shape). Interestingly, we also detected floral resource partitioning at the colony level within all commonest bumblebee species evaluated. In general, floral resource partitioning between bumblebee individuals decreased with species- and individual-level variation in body size (intertegular span). These results suggest that bumblebee species may coexist via the flexibility in their preferences for specific floral traits, which filters up to support the co-occurrence of high numbers of species and individuals in this global hotspot of species richness.
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Affiliation(s)
- Zhong-Ming Ye
- CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- Center of Conservation Biology, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan, China
| | - Yong-Deng He
- CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Pedro J Bergamo
- Instituto de Pesquisas Jardim Botânico do Rio de Janeiro, Rio de Janeiro, Brazil
| | - Michael C Orr
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing, China
- Entomologie, Staatliches Museum für Naturkunde Stuttgart, Stuttgart, Germany
| | - Wen Huang
- CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Xiao-Fang Jin
- College of Life Sciences, Wuhan University, Wuhan, China
| | - Han-Ning Lun
- CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Qing-Feng Wang
- CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- Center of Conservation Biology, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan, China
| | - Chun-Feng Yang
- CAS Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- Center of Conservation Biology, Core Botanical Gardens, Chinese Academy of Sciences, Wuhan, China
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Anthony MA, Tedersoo L, De Vos B, Croisé L, Meesenburg H, Wagner M, Andreae H, Jacob F, Lech P, Kowalska A, Greve M, Popova G, Frey B, Gessler A, Schaub M, Ferretti M, Waldner P, Calatayud V, Canullo R, Papitto G, Marinšek A, Ingerslev M, Vesterdal L, Rautio P, Meissner H, Timmermann V, Dettwiler M, Eickenscheidt N, Schmitz A, Van Tiel N, Crowther TW, Averill C. Fungal community composition predicts forest carbon storage at a continental scale. Nat Commun 2024; 15:2385. [PMID: 38493170 PMCID: PMC10944544 DOI: 10.1038/s41467-024-46792-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 03/11/2024] [Indexed: 03/18/2024] Open
Abstract
Forest soils harbor hyper-diverse microbial communities which fundamentally regulate carbon and nutrient cycling across the globe. Directly testing hypotheses on how microbiome diversity is linked to forest carbon storage has been difficult, due to a lack of paired data on microbiome diversity and in situ observations of forest carbon accumulation and storage. Here, we investigated the relationship between soil microbiomes and forest carbon across 238 forest inventory plots spanning 15 European countries. We show that the composition and diversity of fungal, but not bacterial, species is tightly coupled to both forest biotic conditions and a seven-fold variation in tree growth rates and biomass carbon stocks when controlling for the effects of dominant tree type, climate, and other environmental factors. This linkage is particularly strong for symbiotic endophytic and ectomycorrhizal fungi known to directly facilitate tree growth. Since tree growth rates in this system are closely and positively correlated with belowground soil carbon stocks, we conclude that fungal composition is a strong predictor of overall forest carbon storage across the European continent.
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Affiliation(s)
- Mark A Anthony
- Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland.
- Swiss Federal Institute for Forests, Snow, and the Landscape Research (WSL), Birmensdorf, Switzerland.
- Center for Microbiology and Environmental Systems Science, University of Vienna, Vienna, Austria.
| | - Leho Tedersoo
- Mycology and Microbiology Center, University of Tartu, Tartu, Estonia
| | - Bruno De Vos
- Environment & Climate Unit, Research Institute for Nature and Forest, Geraardsbergen, Belgium
| | - Luc Croisé
- French National Forest Office, Fontainebleau, France
| | | | - Markus Wagner
- Northwest German Forest Research Institute, Göttingen, Germany
| | | | - Frank Jacob
- Sachsenforst State Forest, Pirna OT Graupa, Germany
| | - Paweł Lech
- Forest Research Institute, Sękocin Stary, Poland
| | | | - Martin Greve
- Research Institute for Forest Ecology and Forestry, Trippstadt, Germany
| | - Genoveva Popova
- Executive Environmental Agency at the Ministry of Environment and Water, Sofia, Bulgaria
| | - Beat Frey
- Swiss Federal Institute for Forests, Snow, and the Landscape Research (WSL), Birmensdorf, Switzerland
| | - Arthur Gessler
- Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland
- Swiss Federal Institute for Forests, Snow, and the Landscape Research (WSL), Birmensdorf, Switzerland
| | - Marcus Schaub
- Swiss Federal Institute for Forests, Snow, and the Landscape Research (WSL), Birmensdorf, Switzerland
| | - Marco Ferretti
- Swiss Federal Institute for Forests, Snow, and the Landscape Research (WSL), Birmensdorf, Switzerland
| | - Peter Waldner
- Swiss Federal Institute for Forests, Snow, and the Landscape Research (WSL), Birmensdorf, Switzerland
| | | | - Roberto Canullo
- Department of Plant Diversity and Ecosystem Management, University of Camerino, Camerino, Italy
| | - Giancarlo Papitto
- Arma dei Carabinieri Forestry Environmental and Agri-food protection Units, Rome, Italy
| | | | - Morten Ingerslev
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Frederiksberg C, Denmark
| | - Lars Vesterdal
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Frederiksberg C, Denmark
| | - Pasi Rautio
- Natural Resources Institute Finland, Rovaniemi, Finland
| | - Helge Meissner
- Division of Forest and Forest Resources, Norwegian Institute of Bioeconomy Research, Ås, Norway
| | - Volkmar Timmermann
- Division of Biotechnology and Plant Health, Norwegian Institute of Bioeconomy Research, Ås, Norway
| | - Mike Dettwiler
- Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland
| | - Nadine Eickenscheidt
- State Agency for Nature, Environment and Consumer Protection of North Rhine-Westphalia, Recklinghausen, Germany
| | - Andreas Schmitz
- State Agency for Nature, Environment and Consumer Protection of North Rhine-Westphalia, Recklinghausen, Germany
- Thuenen Institut of Forest Ecosystems, 16225, Eberswalde, Germany
| | - Nina Van Tiel
- Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland
- Environmetnal Computational Science and Earth Observation Laboratory, EPFL, Lausanne, Switzerland
| | - Thomas W Crowther
- Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland
| | - Colin Averill
- Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland
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43
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Moisset de Espanés P, Ramos-Jiliberto R. Both local stability and dispersal contribute to metacommunity sensitivity to asynchronous habitat availability. Sci Rep 2024; 14:6273. [PMID: 38491098 PMCID: PMC10943024 DOI: 10.1038/s41598-024-56632-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Accepted: 03/08/2024] [Indexed: 03/18/2024] Open
Abstract
The stability of isolated communities depends on the complexity of their foodwebs. However, it remains unclear how local stability interacts with dispersal in multitrophic metacommunities to shape biodiversity patterns. This lack of understanding is deeper in the more realistic frame of landscapes that exhibit non-trivial and time-varying structures. Therefore, in this study, we aim to evaluate the influence of local stabilizing factors versus dispersal in determining the sensitivity of metacommunity biodiversity to increasing asynchrony of site availability. Additionally, we assess the role of foodweb complexity and landscape structure as modulating factors. To accomplish our goals we developed a model based on random matrices for local communities, which are linked by stochastic dispersal over explicit dynamic landscapes. We ran numerical simulations and computed the effect sizes of foodweb temperature, self-limitation, dispersal ability, and all pairwise combinations, on the sensitivity of biodiversity to landscape asynchrony. In our experiments we explored gradients of species richness, foodweb connectance, number of sites, and landscape modularity. Our results showed that asynchrony among site availability periods reduced α -diversity and increased β -diversity. Asynchrony increased γ -diversity at high dispersal rates. Both local and regional stabilizing factors determined the sensitivity of metacommunities to landscape asynchrony. Local factors were more influential in landscapes with fewer sites and lower modularity, as well as in metacommunities composed of complex foodwebs. This research offers insights into the dynamics of metacommunities in dynamic landscapes, providing valuable knowledge about the interplay between local and regional factors in shaping ecological stability and species persistence.
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Affiliation(s)
- Pablo Moisset de Espanés
- Centro de Biotecnología y Bioingeniería, Universidad de Chile, Av. Beaucheff 851, Santiago, Chile
| | - Rodrigo Ramos-Jiliberto
- GEMA Center for Genomics, Ecology and Environment, Universidad Mayor, Camino La Pirámide 5750, Huechuraba, Santiago, Chile.
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44
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Ratz T, Chechi TS, Dimopoulou AI, Sedlmair SD, Tuni C. Heatwaves inflict reproductive but not survival costs to male insects. J Exp Biol 2024; 227:jeb246698. [PMID: 38436413 DOI: 10.1242/jeb.246698] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Accepted: 02/27/2024] [Indexed: 03/05/2024]
Abstract
Climate change is having a dramatic effect on the environment, with rising global temperatures and more frequent extreme climatic events, such as heatwaves, that can hamper organisms' biological functions. Although it is clear that sudden and extreme temperatures can damage reproductive processes, there is limited understanding of the effects of heatwaves on male mating behaviour and reproductive success. We tested for the effects of heat stress induced by ecologically relevant heatwaves (33°C and 39°C for five consecutive days) on the mating behaviour, reproductive success, body mass and survival of male field crickets Gryllus bimaculatus, paired with untreated females. We predicted life-history and reproductive costs would increase with increasing heatwave intensity. Consistent with our expectations, males exposed to the highest heatwave temperature produced the fewest offspring, while having to increase courtship effort to successfully mate. Males also gained relatively more weight following heatwave exposure. Given that we found no difference in lifetime survival, our results suggest a potential trade-off in resource allocation between somatic maintenance and reproductive investment. Taken together, our findings indicate that sublethal effects of heatwaves could reduce the growth and persistence of animal populations by negatively impacting reproductive rates. These findings highlight the need for considering thermal ecologies, life history and behaviour to better understand the consequences of extreme climatic events on individuals and populations.
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Affiliation(s)
- Tom Ratz
- Department of Biology, Ludwig-Maximilians-University Munich, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
- Department of Evolutionary Biology and Environmental Studies, University of Zürich, Winterthurerstraße 190, 8057 Zürich, Switzerland
| | - Tejinder Singh Chechi
- Department of Physics, Chemistry and Biology, Linköping University, 58183 Linköping, Sweden
| | - Aliki-Ioanna Dimopoulou
- Department of Biology, Ludwig-Maximilians-University Munich, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
| | - Stephanie Daniela Sedlmair
- Department of Biology, Ludwig-Maximilians-University Munich, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
| | - Cristina Tuni
- Department of Biology, Ludwig-Maximilians-University Munich, Großhaderner Str. 2, 82152 Planegg-Martinsried, Germany
- Department of Life Sciences and Systems Biology, University of Turin, Via Accademia Albertina 13, 10123 Torino, Italy
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45
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Power CC, Normand S, von Arx G, Elberling B, Corcoran D, Krog AB, Bouvin NK, Treier UA, Westergaard-Nielsen A, Liu Y, Prendin AL. No effect of snow on shrub xylem traits: Insights from a snow-manipulation experiment on Disko Island, Greenland. Sci Total Environ 2024; 916:169896. [PMID: 38185160 DOI: 10.1016/j.scitotenv.2024.169896] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Revised: 12/18/2023] [Accepted: 01/02/2024] [Indexed: 01/09/2024]
Abstract
Widespread shrubification across the Arctic has been generally attributed to increasing air temperatures, but responses vary across species and sites. Wood structures related to the plant hydraulic architecture may respond to local environmental conditions and potentially impact shrub growth, but these relationships remain understudied. Using methods of dendroanatomy, we analysed shrub ring width (RW) and xylem anatomical traits of 80 individuals of Salix glauca L. and Betula nana L. at a snow manipulation experiment in Western Greenland. We assessed how their responses differed between treatments (increased versus ambient snow depth) and soil moisture regimes (wet and dry). Despite an increase in snow depth due to snow fences (28-39 %), neither RW nor anatomical traits in either species showed significant responses to this increase. In contrast, irrespective of the snow treatment, the xylem specific hydraulic conductivity (Ks) and earlywood vessel size (LA95) for the study period were larger in S. glauca (p < 0.1, p < 0.01) and B. nana (p < 0.01, p < 0.001) at the wet than the dry site, while both species had larger vessel groups at the dry than the wet site (p < 0.01). RW of B. nana was higher at the wet site (p < 0.01), but no differences were observed for S. glauca. Additionally, B. nana Ks and LA95 showed different trends over the study period, with decreases observed at the dry site (p < 0.001), while for other responses no difference was observed. Our results indicate that, taking into account ontogenetic and allometric trends, hydraulic related xylem traits of both species, along with B. nana growth, were influenced by soil moisture. These findings suggest that soil moisture regime, but not snow cover, may determine xylem responses to future climate change and thus add to the heterogeneity of Arctic shrub dynamics, though more long-term species- and site- specific studies are needed.
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Affiliation(s)
- Candice C Power
- Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Denmark.
| | - Signe Normand
- Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Denmark; SustainScapes - Center for Sustainable Landscapes under Global Change, Aarhus University, Denmark
| | - Georg von Arx
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland; Oeschger Centre for Climate Change Research, University of Bern, Bern, Switzerland
| | - Bo Elberling
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Denmark; Center for Permafrost (CENPERM), Department of Geosciences and Natural Resource Management, University of Copenhagen, Denmark
| | - Derek Corcoran
- Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Denmark; SustainScapes - Center for Sustainable Landscapes under Global Change, Aarhus University, Denmark
| | - Amanda B Krog
- Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Denmark
| | | | - Urs Albert Treier
- Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Denmark; SustainScapes - Center for Sustainable Landscapes under Global Change, Aarhus University, Denmark
| | - Andreas Westergaard-Nielsen
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Denmark; Center for Permafrost (CENPERM), Department of Geosciences and Natural Resource Management, University of Copenhagen, Denmark
| | - Yijing Liu
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Denmark
| | - Angela L Prendin
- Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Denmark; Department of Land Environment Agriculture and Forestry (TeSAF), University of Padova, Legnaro, Italy
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46
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Wang Y, Kong J, Gu S, Huang B, Sun P. Dynamics of benthic microeukaryotic communities in a mangrove wetland invaded by Spartina alterniflora: Effects of vegetation, seasonality, and sediment depth. Sci Total Environ 2024; 916:170231. [PMID: 38246384 DOI: 10.1016/j.scitotenv.2024.170231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Revised: 01/13/2024] [Accepted: 01/15/2024] [Indexed: 01/23/2024]
Abstract
Benthic microeukaryotes are crucial mediators of biogeochemical cycles in coastal wetland ecosystems, yet their spatial and temporal variability remains poorly understood. This study delineates the diversity patterns of benthic microeukaryotes in a Spartina alterniflora-invaded mangrove ecosystem in Fujian, China. Using high-throughput sequencing of 18S rRNA gene transcripts, we identified the influences of vegetation, seasonality, and sediment depth on microeukaryotic communities. We discovered that vegetation cover significantly affects community composition, primarily driven by nutrient concentrations and pH. The community structure of microeukaryotes varied seasonally and vertically, correlating with changes in sediment temperature, pH, salinity, and fucoxanthin concentration. Notably, invasive Spartina alterniflora habitats showed enhanced heterotrophic interactions, suggesting that invasive species can reshape benthic microeukaryotic co-occurrence patterns. Seasonal co-occurrence patterns revealed dominant Bacillariophyta assemblages exhibited distinct network modules enriched in the cold (spring) and warm (summer and fall) seasons, respectively, which indicated potential ecological niche differentiation. Our findings reveal the complex relationships between environmental factors and benthic microeukaryotic diversity, offering insights into microbial responses to natural and invasive vegetation influences.
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Affiliation(s)
- Ying Wang
- Fujian Provincial Key Laboratory for Coastal Ecology and Environmental Studies, Xiamen University, Xiamen 361102, China; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen 361102, China
| | - Jie Kong
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
| | - Songsong Gu
- Key Laboratory for Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences (CAS), Beijing 100085, China
| | - Bangqin Huang
- Fujian Provincial Key Laboratory for Coastal Ecology and Environmental Studies, Xiamen University, Xiamen 361102, China; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen 361102, China.
| | - Ping Sun
- Fujian Provincial Key Laboratory for Coastal Ecology and Environmental Studies, Xiamen University, Xiamen 361102, China; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen 361102, China.
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47
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Guo P, Zhao X, Yang Z, Wang Y, Li H, Zhang L. Water, starch, and nuclear behavior in ray parenchyma during heartwood formation of Catalpa bungei 'Jinsi'. Heliyon 2024; 10:e27231. [PMID: 38486779 PMCID: PMC10937695 DOI: 10.1016/j.heliyon.2024.e27231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Revised: 12/13/2023] [Accepted: 02/26/2024] [Indexed: 03/17/2024] Open
Abstract
Catalpa bungei 'Jinsi', a cultivar of C. bungei C. A. Mey., is valued for its heartwood with good overall mechanical properties, naturally durable and golden-yellow color. Little is known about heartwood formation in C. bungei 'Jinsi' trees. The behavior of starch, water, and nuclei was studied in the xylem tissue of C. bungei 'Jinsi' concerning aging in ray parenchyma cells. Blocks containing heartwood, golden zone, transition zone, and sapwood were collected from the stems of six C. bungei 'Jinsi' trees. The moisture content of the blocks was measured by oven drying. Changes in starch and nuclei in ray parenchyma were investigated in radial profiles from sapwood to heartwood blocks using microscopy and various staining techniques. The nuclear size and starch content gradually decreased to heartwood. While the horizontal distribution of moisture content of C. bungei 'Jinsi' was very varied, with the heartwood and golden zone being lower than sapwood but slightly higher than the transition zone. Starch grains were rare, but nuclei were still present in some ray parenchyma cells in the heartwood and golden zone. The nuclei showed irregular shape and elongation before disintegration. These results suggest that the most apparent change occurs in the transition zone, the critical location involved in forming C. bungei 'Jinsi' heartwood. Water and starch appear to be actively engaged in heartwood formation. The loss of function of ray parenchyma cells results from heartwood formation.
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Affiliation(s)
- Pingping Guo
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang, 471023, China
| | - Xiping Zhao
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang, 471023, China
| | - Zifei Yang
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang, 471023, China
| | - Yingxin Wang
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang, 471023, China
| | - Hongying Li
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang, 471023, China
| | - Lepei Zhang
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang, 471023, China
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48
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Zhang P, Jiao L, Xue R, Wei M, Wang X, Li Q. Wet events increase tree growth recovery after different drought intensities. Sci Total Environ 2024; 924:171595. [PMID: 38492585 DOI: 10.1016/j.scitotenv.2024.171595] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Revised: 02/08/2024] [Accepted: 03/07/2024] [Indexed: 03/18/2024]
Abstract
Understanding the dynamics of tree recovery after drought is critical for predicting the state of tree growth in the context of future climate change. While there has been a great deal of researches showing that drought events can cause numerous significant negative effects on tree growth, the positive effects of post-drought wetting events on tree growth remain unclear. Therefore, we analyzed the effect of wet and dry events on the radial growth of trees in Central Asia using data on the width of tree rings. The results showed that 1) Drought is the main limiting factor for radial growth of trees in Central Asia, and that as the intensity and sensitivity of drought increases, tree resistance decreases and recovery rises, and more frequent droughts reduce tree resistance. 2) Tree radial growth varied significantly with wet and dry conditions, with wet events before and after drought events significantly enhancing tree radial growth. 3) When drought is followed by a wetting event, the relationship between tree resistance and recovery is closer to the "line of full resilience", with a significant increase in recovery, and compensatory growth is more likely to occur. Thus, wetting events have a significant positive effect on tree radial growth and are a key factor in rapid tree growth recovery after drought.
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Affiliation(s)
- Peng Zhang
- College of Geography and Environment Sciences, Northwest Normal University, Lanzhou 730070, China; Key Laboratory of Resource Environment and Sustainable Development of Oasis, Gansu Province, Lanzhou 730070, China
| | - Liang Jiao
- College of Geography and Environment Sciences, Northwest Normal University, Lanzhou 730070, China; Key Laboratory of Resource Environment and Sustainable Development of Oasis, Gansu Province, Lanzhou 730070, China.
| | - Ruhong Xue
- College of Geography and Environment Sciences, Northwest Normal University, Lanzhou 730070, China; Key Laboratory of Resource Environment and Sustainable Development of Oasis, Gansu Province, Lanzhou 730070, China
| | - Mengyuan Wei
- College of Geography and Environment Sciences, Northwest Normal University, Lanzhou 730070, China; Key Laboratory of Resource Environment and Sustainable Development of Oasis, Gansu Province, Lanzhou 730070, China
| | - Xuge Wang
- College of Geography and Environment Sciences, Northwest Normal University, Lanzhou 730070, China; Key Laboratory of Resource Environment and Sustainable Development of Oasis, Gansu Province, Lanzhou 730070, China
| | - Qian Li
- College of Geography and Environment Sciences, Northwest Normal University, Lanzhou 730070, China; Key Laboratory of Resource Environment and Sustainable Development of Oasis, Gansu Province, Lanzhou 730070, China
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49
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Rivest S, Muralidhar M, Forrest JRK. Pollen chemical and mechanical defences restrict host-plant use by bees. Proc Biol Sci 2024; 291:20232298. [PMID: 38471551 PMCID: PMC10932708 DOI: 10.1098/rspb.2023.2298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 01/31/2024] [Indexed: 03/14/2024] Open
Abstract
Plants produce an array of chemical and mechanical defences that provide protection against many herbivores and pathogens. Putatively defensive compounds and structures can even occur in floral rewards: for example, the pollen of some plant taxa contains toxic compounds or possesses conspicuous spines. Yet little is known about whether pollen defences restrict host-plant use by bees. In other words, do bees, like other insect herbivores, tolerate the defences of their specific host plants while being harmed by non-host defences? To answer this question, we compared the effects of a chemical defence from Lupinus (Fabaceae) pollen and a putative mechanical defence (pollen spines) from Asteraceae pollen on larval survival of nine bee species in the tribe Osmiini (Megachilidae) varying in their pollen-host use. We found that both types of pollen defences reduce larval survival rate in some bee species. These detrimental effects were, however, mediated by host-plant associations, with bees being more tolerant of the pollen defences of their hosts, relative to the defences of plant taxa exploited by other species. This pattern strongly suggests that bees are adapted to the pollen defences of their hosts, and that host-plant use by bees is constrained by their ability to tolerate such defences.
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Affiliation(s)
- Sébastien Rivest
- Department of Biology, University of Ottawa, Ottawa, ON, Canada K1N 6N5
- Rocky Mountain Biological Laboratory, Crested Butte, CO 81224, USA
| | | | - Jessica R. K. Forrest
- Department of Biology, University of Ottawa, Ottawa, ON, Canada K1N 6N5
- Rocky Mountain Biological Laboratory, Crested Butte, CO 81224, USA
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50
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Klein SG, Roch C, Duarte CM. Systematic review of the uncertainty of coral reef futures under climate change. Nat Commun 2024; 15:2224. [PMID: 38472196 DOI: 10.1038/s41467-024-46255-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Accepted: 02/19/2024] [Indexed: 03/14/2024] Open
Abstract
Climate change impact syntheses, such as those by the Intergovernmental Panel on Climate Change, consistently assert that limiting global warming to 1.5 °C is unlikely to safeguard most of the world's coral reefs. This prognosis is primarily based on a small subset of available models that apply similar 'excess heat' threshold methodologies. Our systematic review of 79 articles projecting coral reef responses to climate change revealed five main methods. 'Excess heat' models constituted one third (32%) of all studies but attracted a disproportionate share (68%) of citations in the field. Most methods relied on deterministic cause-and-effect rules rather than probabilistic relationships, impeding the field's ability to estimate uncertainty. To synthesize the available projections, we aimed to identify models with comparable outputs. However, divergent choices in model outputs and scenarios limited the analysis to a fraction of available studies. We found substantial discrepancies in the projected impacts, indicating that the subset of articles serving as a basis for climate change syntheses may project more severe consequences than other studies and methodologies. Drawing on insights from other fields, we propose methods to incorporate uncertainty into deterministic modeling approaches and propose a multi-model ensemble approach to generating probabilistic projections for coral reef futures.
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Affiliation(s)
- Shannon G Klein
- Marine Science Program, Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia.
- Red Sea Research Center (RSRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia.
- Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia.
| | - Cassandra Roch
- Marine Science Program, Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia
- Red Sea Research Center (RSRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia
- Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia
| | - Carlos M Duarte
- Marine Science Program, Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia.
- Red Sea Research Center (RSRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia.
- Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Kingdom of Saudi Arabia.
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