Efficient excitation energy transfer in long meso-meso linked Zn(II) porphyrin arrays bearing a 5,15-bisphenylethynylated Zn(II) porphyrin acceptor

A Hexagonal Prismatic Porphyrin Array: Synthesis, STM Detection, and Efficient Energy Hopping in Near-Infrared Region

A belt-shaped hexagonal cyclic porphyrin array 2 that comprises of six meso-meso, beta-beta, beta-beta triply linked diporphyrins 3 bridged by 1,3-phenylene spacers is prepared by oxidation from cyclic dodecameric array 1 consisting of six meso-meso directly linked diporphyrins 4 with DDQ and Sc(OTf)3. The absorption spectrum of 2 is similar to that of the constituent subunit 3 but shows a slight red-shift for the Q-bands in near-infrared (NIR) region, indicating the exciton coupling between the neighboring diporphyrin chromophores. Observed total exciton coupling energies in the absorption spectra were largely matched with the calculated values based on point-dipole exciton coupling approximation. It was found that the experimental exciton coupling strength (292 cm(-1)) of the Q-band in 2 is slightly larger than the calculated one (99 cm(-1)), indicating that the electronic communications are enhanced through 1,3-phenylene linkers in hexameric macromolecule. A rate of the excitation energy hopping (EEH) that occurs in 2 at the lowest excited singlet state in the near-infrared region has been determined to be (1.8 ps)(-1) on the basis of the pump-power dependent femtosecond transient absorption (TA) and the transient absorption anisotropy (TAA) decay measurements. The 2 times faster EEH rate of 2 than that of 1 (4.0 ps)(-1) mainly comes from involving through-bond energy transfer among diporphyrin subunits via 1,3-phenylene bridges as well as Förster-type through-space EEH processes. STM measurement of 2 in the Cu(100) surface revealed that it takes several discrete conformations with respect to the relative orientation of neighboring diporphyrins. Collectively, an effective EEH in the NIR region is realized in 2 due largely to the intensified oscillator strength in the S(1) state (Q-band) and the close proximity held by 1,3-phenylene spacers.

Regioselective Borylation of Porphyrins by CH Bond Activation under Iridium Catalysis to Afford Useful Building Blocks for Porphyrin Assemblies

Highly regioselective and efficient borylation of a variety of porphyrins has been achieved by reaction with bis(pinacolato)diboron through C-H bond activation under iridium catalysis on the basis of the synthetic protocol developed by Miyaura, Hartwig, and Smith. A boryl group can be selectively introduced at sterically uncongested positions in the peripheral aryl groups of porphyrin substrates whose peripheral beta-positions are sterically hindered. Curiously, beta substituents adjacent to the aryl group to be borylated have unexpectedly large effects on the regioselectivity, because the iridium catalyst can discriminate between subtle steric differences. Chemoselective borylation was also achieved for several functionalized porphyrins. This borylation protocol can be applied to various monomeric and oligomeric functional porphyrins, hence offering an efficient route to elaborate multiporphyrin-based molecular constructs.

Quantum-chemical investigation of the electroabsorption spectra of directly meso-meso-linked porphyrin arrays: essential role of charge-transfer excited states accidentally overlapping with soret bands

The electroabsorption (EA) spectra of directly meso-meso-linked porphyrin arrays (Zn, n = 1-3) have been investigated by means of the sum-over-states (SOS) approach at the INDO/S-SCI level theory. The experimental EA spectra of Zn (n > or = 2) exhibit an unusual second-derivative line shape at the exciton split low-energy B(x) band in contrast to the first-derivative spectrum of Z1, which is readily ascribed to a quadratic Stark shift of the B (Soret) band. Although the second-derivative line shape is usually attributed to a difference in the permanent dipole moment (Deltamu) between the ground and excited states, it should be vanishing for Zn due to their essentially D(2)(d) or D(2)(h) symmetry. As pointed out in our previous studies, the interporphyrinic charge-transfer (CT) excited states are accidentally overlapping with the excitonic B bands and the present calculations reveal that the B(x) state is strongly coupled via a transition dipole moment with two such CT states. These situations give rise to a quadratic Stark effect on the B(x) band that is intermediate between Stark shift (first derivative) and Stark broadening (second derivative), and play a central role in establishing the anomalous second derivative nature of the EA spectrum. Moreover, based on the comparison between the theoretical and experimental spectra, there must be an additional factor that further enhances the second derivative nature of the EA spectrum of porphyrin arrays. Discussions on this issue including the preliminary investigations on the role of solvent (PMMA)-induced asymmetry are also presented.

Porphyrin-Appended Europium(III) Bis(phthalocyaninato) Complexes: Synthesis, Characterization, and Photophysical Properties

Mixed cyclization of 3-mono-, 4-mono-, or 4,5-di(porphyrinated) phthalonitrile compounds 2, 3, or 6 and unsubstituted phthalonitrile with the half-sandwich complex [EuIII(acac)(Pc)] (Pc=phthalocyaninate, acac=acetylacetonate) as the template in the presence of 1,8-diazabicyclo[5.4.0]undec-7-ene (DBU) in n-pentanol afforded novel porphyrin-appended europium(III) bis(phthalocyaninato) complexes 7-9 in 30-40% yield. These mixed tetrapyrrole triads and tetrad were spectroscopically and electrochemically characterized and their photophysical properties were also investigated with steady-state and transient spectroscopic methods. It has been found that the fluorescence of the porphyrin moiety is quenched effectively by the double-decker unit through an intramolecular photoinduced electron-transfer process, which takes place in several hundred femtoseconds, while the recombination of the charge-separated state occurs in several picoseconds. By using different phthalocyanines containing different numbers of porphyrin substituents at the peripheral or nonperipheral position(s) of the ligand, while the other unsubstituted phthalocyanine remains unchanged in these double-deckers, the effects of the number and the position of the porphyrin substituents on these photophysical processes were also examined.

Synthesis and Characterization of Donor−Acceptor Chromophores for Unidirectional Electron Transfer

[reaction: see text] A series of electron-transfer chromophores containing a donor and acceptor linked by an alkyl spacer were synthesized, and their electronic spectra were investigated. By inclusion with amylose, the supramolecularly encapsulated chromophores exhibit enhanced fluorescence quenching with discrete distance dependence and acquire the ability to sustain self-assemblies of a densely packed supramolecular array on a SiOH/Si substrate.

Phosphorus(V) Porphyrins with Axial Carbazole-Based Dendritic Substituents

[structure: see text] Three phosphorus(V) porphyrins with axial carbazole-based dendritic substituents (D-A-D) have been designed and synthesized, which are nonfluorescent due to their effective electron transfer from the carbazole dendron to the excited porphyrin within the dendritic matrix. The incident photon to current conversion efficiencies (IPCE) spectra demonstrate that the molecular structure of the dendrimers can significantly affect the photovoltaic response to the visible light.

Synthesis, Structures, and Properties ofmeso-Phosphorylporphyrins: Self-Organization through P–Oxo–Zinc Coordination

The synthesis, structures, and optical and electrochemical properties of meso-phosphorylporphyrins are described. The copper-catalyzed carbon-phosphorus cross-coupling reaction of a meso-iodoporphyrin with di-n-butyl phosphite and diphenylphosphane oxide has proved to be an efficient and general method for the synthesis of meso-phosphorylporphyrins. Zinc phosphorylporphyrins thus obtained readily undergo self-organization through P-oxo-Zn coordination to form noncovalently linked, cofacial porphyrin dimers or linear oligomers, which have been characterized by spectroscopic methods and X-ray crystallographic analyses. In toluene, CH(2)Cl(2), and CHCl(3), the zinc phosphorylporphyrins exist mostly as dimers or monomers, depending on their concentrations, the temperature, and the presence of additives. The self-association constants for dimerization in toluene have been determined by UV/Vis absorption titration measurements. The meso-diphenylphosphorylporphyrin dimer displays excitonic coupling of the Soret band with a splitting energy of 940 cm(-1). Fluorescence lifetimes of the zinc phosphorylporphyrins have been found to be affected only slightly by the concentration of the solution, and by the addition of triphenylphosphane oxide, suggesting that the effect of dimerization on their photodynamics in the S(1) state is negligible. On the other hand, the effect of dimerization is clearly reflected in their electrochemical oxidation processes, as the initially produced radical cations are efficiently delocalized over the two porphyrin rings. These findings demonstrate the potential utility of meso-phosphorylporphyrins as new models for the special pair in photosynthesis and as new building blocks for porphyrin-based supramolecular materials.

Cyclic porphyrin arrays as artificial photosynthetic antenna: synthesis and excitation energy transfer

Covalently linked cyclic porphyrin arrays have been explored in recent years as artificial photosynthetic antenna. In this review we present the fundamental aspects of covalently linked cyclic porphyrin arrays by highlighting recent progress. The major emphasis of this tutorial review lies on the synthetic method, the structure, and the excitation energy transfer (EET) of such arrays. The final cyclization steps were often performed with the aid of templates. Efficient EET along the wheel is observed in these cyclic arrays, but ultrafast EET processes with rates of <1 ps, which rival those in the natural LH2, are rare and have been identified only in cyclic arrays 30-32 composed of directly meso-meso linked porphyrins.

Relationship between Incoherent Excitation Energy Migration Processes and Molecular Structures in Zinc(II) Porphyrin Dendrimers

Multiporphyrin dendrimers are among the most promising architectures to mimic the oxygenic light-harvesting complex because of their structural similarities and synthetic convenience. The overall geometries of dendrimers are determined by the core structure, the type of dendron, and the number of generations of interior repeating units. The rigid core and bulky volume of exterior porphyrin units in multiporphyrin dendrimers give rise to well-ordered three-dimensional structures. As the number of generations of interior repeating units increases, however, the overall structures of dendrimers become disordered and randomized due to the flexibility of the repeating units. To reveal the relationship between molecular structure and processes of excitation-energy migration in multiporphyrin dendrimers, we calculated the molecular structure and measured the time-resolved transient absorption and fluorescence anisotropy decays for various hexaarylbenzene-anchored polyester zinc(II) porphyrin dendrimers along with three types of porphyrin dendrons as references. We found that the congested two-branched type dendrimers exhibit more efficient energy migration processes than one- or three-branched type dendrimers because of multiple energy migration pathways, and the three-dimensional packing efficiency of dendrimers strongly depends on the type of dendrons.

Synthesis and Optical Properties of the Helical Oligonaphthalenes

We have developed an efficient synthesis method for optically active oligonaphthalenes (from 2 mer to 16 mer), which are connected at their 1,4-positions, under oxidative homo coupling with a stoichiometric amount of CuCl(2) and amines. The absolute configuration of the newly formed axis bond was determined based on the CD spectra of oligonaphthalenes with 1) two pyrene rings on the central naphthalenes or 2) two tetraphenylporphyrins (TPP) on the top and bottom naphthalenes. The fluorescence quantum yields increased as the number of naphthalene units increased in methoxy derivatives 10-12, and the intramolecular energy transfer quantum yields of bispyrene derivatives 7-9 were around 20% regardless of the number of naphthalene units. Furthermore, the hexadecanaphthalene derivative 4b with two TPPs exhibited a clear exciton coupling over an interchromophore distance to ca. 66 A.

Intramolecular and intermolecular energy transfers in donor-acceptor linear porphyrin arrays

We present highly time-resolved spontaneous fluorescence spectra of a porphyrin array system that consists of an energy donor and an acceptor linked by a phenyl group. The donors are meso-meso directly linked zinc(II) porphyrin arrays and the acceptor is a zinc(II) 5,15-di(phenylethynyl)porphyrin. The spectra over the entire Q (S1) emission band following the excitation of the donor B (S2) state have been measured directly without the conventional spectral reconstruction method. The time-resolved fluorescence spectra revealed detailed energy relaxation processes within the donor and subsequent energy transfer to the acceptor. The observed energy transfer rates to the acceptor are consistent with the Forster energy transfer rates calculated on the assumption that the energy is localized in the Q state of each porphyrin unit of the donor prior to the energy transfer. The passage of the energy deposited initially on one porphyrin unit of the donor to the acceptor illustrates a sequence of energy delocalization and localization processes before it finally reaches the acceptor.

A Directly Fused Tetrameric Porphyrin Sheet and Its Anomalous Electronic Properties That Arise from the Planar Cyclooctatetraene Core

Oxidation of a directly meso-meso linked cyclic porphyrin tetramer 2 gave a porphyrin sheet 3. The symmetric square structure of 3 is indicated by its simple 1H NMR spectrum that exhibits only two signals for the porphyrin beta-protons. The absorption spectrum of 3 displays characteristic Soret-like broad bands and weak Q-bands, and its magnetic circular dichroism (MCD) spectrum exhibits a negative Faraday A term at the 762 nm band as a rare case, indicating the absorption as a transition from a nondegenerate level to a degenerate level. A slightly longer S1-state (1.1 ps) and smaller TPA cross section (2750 GM) than a tetrameric linear porphyrin tape also indicate its unique electronic properties. The porphyrin sheet 3 forms stable 1:2 complexes with guest molecules G1 and G2, whose 1H NMR spectra exhibit remarkable downfield shifts for the guest protons that are located just above the cyclooctatetraene (COT) core of 3, whereas the imidazolyl protons bound to the zinc(II) porphyrin local cores are observed at slightly upfield positions. These results have been qualitatively accounted for in terms of the presence of a strong paratropic ring current around the COT core that propagates through the whole pi-electronic network of 3, hence competing with and cancelling the weak diatropic ring currents of the local zinc(II) porphyrins. This explanation was supported by DFT calculation performed at the GIAO-B3LYP/6-31G level, which indicated large positive NICS values within the COT core and small NICS values within the local zinc(II) porphyrins.

Giant Porphyrin Wheels with Large Electronic Coupling as Models of Light-Harvesting Photosynthetic Antenna

Starting from a 1,3-phenylene-linked diporphyrin zinc(II) complex 2ZA, repeated stepwise Ag(I)-promoted coupling reactions provided linear oligomers 4ZA, 6ZA, 8ZA, and 12ZA. The intramolecular cyclization reaction of 12ZA under dilute conditions (1x10(-6) M) gave porphyrin ring C12ZA with a diameter of approximately 35 A in 60% yield. This synthetic strategy has been applied to a 1,3-phenylene-linked tetraporphyrin 4ZB to provide 8ZB, 12ZB, 16ZB, 24ZB, and 32ZB. The intramolecular coupling reaction of 24ZB gave a larger 24-mer porphyrin ring C24ZB with a diameter of approximately 70 A in 34% yield. These two large porphyrin rings were characterized by means of 1H NMR spectroscopy, matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectroscopy, UV-visible spectroscopy, gel permeation chromatography (GPC) analysis, and scanning tunneling microscopy (STM) techniques. The STM images of C12ZA reveal largely circular structures, whereas those of C24ZB exhibit mostly ellipsoidal shapes, indicating more conformational flexibility of C24ZB. Similar to the case of C12ZA, the efficient excitation energy transfer along the ring has been confirmed for C24ZB by using the time-correlated single-photon counting (TCSPC) and picosecond transient absorption anisotropy (TAA) measurements, and occurs with a rate of (35 ps)(-1) for energy hops between neighboring tetraporphyrin subunits. Collectively, the present work provides an important step for the construction of large cyclic-arranged porphyrin arrays with ample electronic interactions as a model of light-harvesting antenna.

Single Molecule Spectroscopic Investigation on Conformational Heterogeneity of Directly Linked Zinc(II) Porphyrin Arrays

We have comparatively investigated the photophysical properties of a series of meso-meso directly linked orthogonal porphyrin arrays (Zn, n = 1, 2, 3, 4, 6, 8, 9, 12, 16, 32, 48, 64, and 96) by ensemble average and single molecule fluorescence spectroscopy. In single molecule fluorescence study, we have recorded the fluorescence intensity trajectories of Zn arrays as the number of porphyrin molecules in the array increases. Up to Z8 in porphyrin arrays, each single array exhibits multiple stepwise photobleaching behaviors in fluorescence intensity trajectories, indicating that each porphyrin unit in the array acts as an individual fluorescent unit due to a maintenance of linear rigid structure of the array. On the other hand, porphyrin arrays longer than Z8 such as Z16, Z32, Z48, and Z64 show complicated photobleaching behaviors in fluorescence intensity trajectories. The origin of complex photobleaching behaviors is believed to be increasing nonradiative decay channels contributed by the enhanced structural nonlinearity in longer arrays. The fluorescence measurements of Zn arrays on single molecule level show a mismatch in the maximum fluorescence intensity level as compared to the solution measurements, which is attributable to the difference in local environment surrounding the porphyrin array. In this work, we have demonstrated the presence of conformational heterogeneity in longer porphyrin arrays by analyzing average survival times and fluorescence spectra of single arrays as the number of porphyrin molecules in the array increases. We believe that the fluorescence properties of porphyrin arrays on single molecule level will provide a platform for further applications as molecular photonic wires.

Surface-Grafted Multiporphyrin Arrays as Light-Harvesting Antennae to Amplify Photocurrent Generation

Organized multiporphyrin arrays were developed on the conductive surface by a novel coordination-directed molecular architecture aiming at efficient photoelectric conversion. The basic strategy employs the mutual coordination of two imidazolylporphyrinatozinc(II) units to form a cofacial dimer. Thus, meso,meso-linked bis(imidazolylporphyrinatozinc) (Zn2(ImP)2) was organized onto imidazolylporphyrinatozinc on the gold substrate as a self-assembled monolayer. The organized Zn2(ImP)2 bearing allyl side chains was covalently linked by ring-closing olefin metathesis catalyzed with Grubbs catalyst. Alternating coordination/metathesis reactions allow the stepwise accumulation of multiporphyrin arrays on the gold electrode. A successive increase in absorption over a wide wavelength range occurred after each accumulation step of Zn2(ImP)2 on the gold electrode, and cathodic photocurrent generation was enhanced in the aqueous electrolyte system, containing viologen as an electron carrier. The significant increase of the photocurrent indicates that the multiporphyrin array works as a "light-harvesting antenna" on the gold electrode.

Excitation-Energy Migration in Self-Assembled Cyclic Zinc(II)-Porphyrin Arrays: A Close Mimicry of a Natural Light-Harvesting System

The excitation-energy-hopping (EEH) times within two-dimensional cyclic zinc(II)-porphyrin arrays 5 and 6, which were prepared by intermolecular coordination and ring-closing metathesis reaction of olefins, were deduced by modeling the EEH process based on the anisotropy depolarization as well as the exciton-exciton annihilation dynamics. Assuming the number of energy-hopping sites N = 5 and 6, the two different experimental observables, that is, anisotropy depolarization and exciton-excition annihilation times, consistently give the EEH times of 8.0 +/- 0.5 and 5.3 +/- 0.6 ps through the 1,3-phenylene linkages of 5 and 6, respectively. Accordingly, the self-assembled cyclic porphyrin arrays have proven to be well-defined two-dimensional models for natural light-harvesting complexes.

A Giant Supramolecular Light-Harvesting Antenna−Acceptor Composite

A giant light-harvesting antenna-acceptor composite was constructed by heterodimerization of imidazolylmanganese(III)porphyrin to molecular terminals of the zinc porphyrin array composed of meso-meso linked bis(imidazolylzincporphyrin). Fluorescence quenching titration indicated that the terminal imidazolylmanganase(III)porphyrin quenched excited zinc porphyrin separated by a large number of intervening porphyrins and that the meso-meso linked bis(imidazolylzincporphyrin) array was an efficient light-harvesting antenna.

Giantmeso-meso-Linked Porphyrin Arrays of Micrometer Molecular Length and Their Fabrication

On the basis of the Ag(I)-promoted coupling reaction of zinc(II)-5,15-bis(3,5-dioctyloxyphenyl)porphyrin Z1, chain elongation has been attempted by using a stepwise doubling approach, which provides Z2, Z4, Z8, Z16, Z32, Z64, Z128, Z256, Z384, and Z512. The porphyrin arrays up to Z128 are sufficiently soluble in CHCl3 and THF despite their very long molecular lengths and rodlike structures, while the arrays over Z128 show a significant drop in solubility and stability. The discrete porphyrin arrays thus isolated were characterized by means of (1)H NMR spectroscopy, matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry, UV/Vis spectroscopy, gel-permeation chromatography (GPC), cyclic voltammetry (CV), single-crystal X-ray crystallography, scanning tunneling microscopy (STM), and atomic force microscopy (AFM). Contrary to expected linear conformations of the arrays Z n (where n is the number of porphyrins), the single molecular images of Z128, Z256, and Z512 revealed largely bent structures; this finding indicates the substantial conformational flexibility of Z n. We also exploited an effective synthetic route by means of which Z n can be fabricated with a thiol-protected aryl group to provide Z n S(2) through Z n Br(2), by bromination with N-bromosuccinimide and subsequent Pd-catalyzed Suzuki-Miyaura arylation. Finally, the reaction of Z256 provided Z512, Z768, and Z1024. Collectively, this work provides an important milestone in the preparation of sub-microscale discrete organic molecules and the fabrication of molecular-based materials, hence significantly contributing to device applications.

Effect of Conformational Heterogeneity on Excitation Energy Transfer Efficiency in Directly meso−meso Linked Zn(II) Porphyrin Arrays

We have investigated the overall excitation energy relaxation dynamics in linear porphyrin arrays as well as the energy transport phenomena by attaching an energy acceptor to one end of a linear porphyrin array by using steady state and time-resolved spectroscopic measurements. We have revealed that the solvation dynamics as well as the conformational dynamics contributes significantly to the energy relaxation processes of linear porphyrin arrays. Consequently, long porphyrin arrays no longer serve as good energy transmission elements in donor-acceptor linked systems due to conformational heterogeneities which provide the non-radiative deactivation channels as energy quenchers.

Directly meso-meso linked porphyrin rings: synthesis, characterization, and efficient excitation energy hopping

Directly meso-meso linked porphyrin rings CZ4, CZ6, and CZ8 that respectively comprise four, six, and eight porphyrins have been synthesized in a stepwise manner from a 5,10-diaryl zinc(II) porphyrin building block. Symmetric cyclic structures have been indicated by their very simple (1)H NMR spectra that exhibit only a single set of porphyrin and their absorption spectra that display a characteristic broad nonsplit Soret band around 460 nm. Energy minimized structures calculated at the B3LYP/6-31G* level indicate that a dihedral angle between neighboring porphyrins decreases in order of CZ6 > CZ8 > CZ4, which is consistent with the (1)H NMR data. Photophysical properties of these molecules have been examined by the steady-state absorption, fluorescence, fluorescence lifetime, fluorescence anisotropy decay, and transient absorption measurements. Both the pump-power dependence on the femtosecond transient absorption and the transient absorption anisotropy decay profiles are directly related with the excitation energy migration processes within the porphyrin rings, where the exciton-exciton annihilation time and the polarization anisotropy rise time are well described in terms of the Forster-type incoherent energy hopping model. Consequently, the excitation energy hopping rates have been estimated for CZ4 (119 +/- 2 fs)(-)(1), CZ6 (342 +/- 59 fs)(-)(1), and CZ8 (236 +/- 31 fs)(-)(1), which reflect the magnitude of the electronic coupling between the neighboring porphyrins. Overall, these porphyrin rings serve as a well-defined wheel-shaped light harvesting antenna model in light of very efficient excitation energy hopping along the ring.

Excitation Energy Migration in A Dodecameric Porphyrin Wheel

Intramolecular excitation energy hopping (EEH) time within a dodecameric porphyrin wheel C6ZA, in which six meso-meso linked zinc(II) diporphyrin (Z2) subunits are bridged by 1,3-phenylene spacers, is deduced by a Förster energy hopping model based on S(1)-S(1) exciton-exciton annihilation and anisotropy depolarization. Under the assumption that the energy hopping sites are six Z2 subunits, two different observables (e.g., exciton-exciton annihilation and anisotropy depolarization times) consistently give the EEH time of 4.0 +/- 0.4 ps via 1,3-phenylene spacer of C6ZA, which is faster than 9.4 ps of linear 2Z2 (1,3-phenylene-linked zinc(II) tetraporphyrin). As a consequence, C6ZA serves as a well-defined two-dimensional model for a light-harvesting complex.

Building Blocks for Self-Assembled Porphyrinic Photonic Wires

[structure: see text] Based on the high affinity of phenanthroline-strapped porphyrins for imidazoles, building blocks for self-assembled, linear porphyrin architectures have been designed. Their synthesis is reported, and the assembly principle is illustrated by the formation of the shortest possible scaffold. Only one type of assembly is observed, and the stepwise energy transfer from the boron dipyrrylmethane (BODIPY) input to the free base output is highly efficient.

Porphyrin Boxes Constructed by Homochiral Self-Sorting Assembly: Optical Separation, Exciton Coupling, and Efficient Excitation Energy Migration

meso-Pyridine-appended zinc(II) porphyrins Mn and their meso-meso-linked dimers Dn assemble spontaneously, in noncoordinating solvents such as CHCl3, into tetrameric porphyrin squares Sn and porphyrin boxes Bn, respectively. Interestingly, formation of Bn from Dn proceeds via homochiral self-sorting assembly, which has been verified by optical separations of B1 and B2. Optically pure enantiomers of B1 and B2 display strong Cotton effects in the CD spectra, which reflect the length of the pyridyl arm, thus providing evidence for the exciton coupling between the noncovalent neighboring porphyrin rings. Excitation energy migration processes within Bn have been investigated by steady-state and time-resolved spectroscopic methods in conjunction with polarization anisotropy measurements. Both the pump-power dependence on the femtosecond transient absorption and the transient absorption anisotropy decay profiles are directly associated with the excitation energy migration process within the Bn boxes, where the exciton-exciton annihilation time and the polarization anisotropy rise time are well described in terms of the Förster-type incoherent energy hopping model by assuming a number of hopping sites of N = 4 and an exciton coherence length of L = 2. Consequently, the excitation energy hopping rates between the zinc(II) diporphyrin units have been estimated for B1 (48 ps)(-1), B2 (98 +/- 3 ps)(-1), and B3 (361 +/- 6 ps)(-1). Overall, the self-assembled porphyrin boxes Bn serve as a well-defined three-dimensional model for the light-harvesting complex.

Directly linked porphyrin arrays with tunable excitonic interactions

On the basis of the Ag(I)-promoted coupling reaction of Zn(II) 5,15-diaryl porphyrin that gave a meso-meso-linked diporphyrin, we developed a variety of directly linked porphyrin arrays including linear, windmill, gridlike, cyclic, and box architectures. Electronic and excitonic interactions are thus fine tuned by placing porphyrin chromophores in well-defined arrangements. Photoexcited-state dynamics of these porphyrin arrays, as revealed by various ultrafast laser-based measurements, are pertinent to photosynthetic light-harvesting antenna in terms of very efficient excitation energy hopping over many porphyrins and lack of a defect that acts as energy sink. The conformational flexibility of a meso-meso-linked diporphyrin has also been used for the fine tuning of excitonic interactions as demonstrated by strapped meso-meso diporphyrins and reversible switching of energy transfer in a triporphyrin. Triply linked porphyrin arrays have also been explored, which exhibit an exceptionally low HOMO-LUMO gap as a result of a fully conjugated pi electronic system over a coplanar platform.

A High-Throughput Screen for Porphyrin Metal Chelatases: Application to the Directed Evolution of Ferrochelatases for Metalloporphyrin Biosynthesis

Porphyrins are of particular interest in a variety of applications ranging from biocatalysis and chemical synthesis to biosensor and electronic technologies as well as cancer treatment. Recently, we have developed a versatile system for the high-level production of porphyrins in engineered E. coli cells with the aim of diversifying substitution patterns and accessing porphyrin systems not readily available through chemical synthesis. However, this approach failed to produce significant amounts of the metalloporphyrin in vivo from overproduced protoporphyrin due to insufficient metal insertion. Therefore, we systematically assessed the activity of the B. subtilis ferrochelatase in vivo and in vitro. A true high-throughput-screening approach based on catalytic in vivo ferrochelatase activity was developed by using fluorescence-activated cell sorting (FACS). This assay was used to screen a library of 2.4 x 10(6) ferrochelatase mutants expressed in protoporphyrin-overproducing recombinant E. coli cells. Several selected protein variants were purified, and their improved catalytic activity was confirmed in vitro. In addition to ferrochelatase activity, metal transport into E. coli was identified as another limitation for in vivo heme overproduction. Overexpression of the metal transporter zupT as part of the assembled pathway increased the overall metalloporphyrin production twofold. This report represents the most exhaustive in vitro evolution study of a ferrochelatase and demonstrates the effectiveness of our novel high-throughput-screening system for directed evolution of ferrochelatases based on their catalytic activity.

Synthesis of fluorescent oligonucleotide--EYFP conjugate: towards supramolecular construction of semisynthetic biomolecular antennae

A novel species of DNA--protein conjugate was synthesized by chemically linking DNA oligonucleotides to Aequorea victoria green fluorescent protein mutant EYFP. An additional cysteine was added to the C-terminus of the EYFP by genetic engineering and used to covalently attach amino-modified oligonucleotide with the aid of the heterobifunctional crosslinker sSMCC. EYFP maintained its fluorescence upon conjugation. The oligonucleotide provides an additional binding site to the fluorescent protein, and hence, the EYFP conjugate could be specifically hybridized with both complementary DNA-protein conjugates in-solution as well as immobilized at capture oligonucleotides attached to a solid substrate. These studies are paving the way for future applications in the self-assembly of photoactive supramolecular complexes, such as artificial light-harvesting systems.

Energy Transfer Followed by Electron Transfer in a Supramolecular Triad Composed of Boron Dipyrrin, Zinc Porphyrin, and Fullerene: A Model for the Photosynthetic Antenna-Reaction Center Complex

The first example of a working model of the photosynthetic antenna-reaction center complex, constructed via self-assembled supramolecular methodology, is reported. For this, a supramolecular triad is assembled by axially coordinating imidazole-appended fulleropyrrolidine to the zinc center of a covalently linked zinc porphyrin-boron dipyrrin dyad. Selective excitation of the boron dipyrrin moiety in the boron dipyrrin-zinc porphyrin dyad resulted in efficient energy transfer (k(ENT)(singlet) = 9.2 x 10(9) s(-)(1); Phi(ENT)(singlet) = 0.83) creating singlet excited zinc porphyrin. Upon forming the supramolecular triad, the excited zinc porphyrin resulted in efficient electron transfer to the coordinated fullerenes, resulting in a charge-separated state (k(cs)(singlet) = 4.7 x 10(9) s(-)(1); Phi(CS)(singlet) = 0.9). The observed energy transfer followed by electron transfer in the present supramolecular triad mimics the events of natural photosynthesis. Here, the boron dipyrrin acts as antenna chlorophyll that absorbs light energy and transports spatially to the photosynthetic reaction center, while the electron transfer from the excited zinc porphyrin to fullerene mimics the primary events of the reaction center where conversion of the electronic excitation energy to chemical energy in the form of charge separation takes place. The important feature of the present model system is its relative "simplicity" because of the utilized supramolecular approach to mimic rather complex "combined antenna-reaction center" events of photosynthesis.

Characterization and Purification of Supramolecular Metal Complexes Using Gel-Permeation Chromatography

Gel-permeation chromatography (GPC) has been used to analyze transition-metal-based squares, triangles, and related supramolecular complexes. Using rhenium-containing molecular squares of different sizes, a linear calibration curve has been established, which was used for confirming the relative sizes of other assemblies. GPC can also discriminate cyclic trimers and tetramers of a dirhodium building block. Preparative GPC has been used to resolve macroscopic samples of a rhenium-based supramolecular mixture into pure syn and anti isomers. A mixture of "triangle" and "square" has also been successfully separated.