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Blahak S, Jenckel M, Höper D, Beer M, Hoffmann B, Schlottau K. Investigations into the presence of nidoviruses in pythons. Virol J 2020; 17:6. [PMID: 31952524 PMCID: PMC6969405 DOI: 10.1186/s12985-020-1279-5] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2019] [Accepted: 01/09/2020] [Indexed: 01/17/2023] Open
Abstract
Background Pneumonia and stomatitis represent severe and often fatal diseases in different captive snakes. Apart from bacterial infections, paramyxo-, adeno-, reo- and arenaviruses cause these diseases. In 2014, new viruses emerged as the cause of pneumonia in pythons. In a few publications, nidoviruses have been reported in association with pneumonia in ball pythons and a tiger python. The viruses were found using new sequencing methods from the organ tissue of dead animals. Methods Severe pneumonia and stomatitis resulted in a high mortality rate in a captive breeding collection of green tree pythons. Unbiased deep sequencing lead to the detection of nidoviral sequences. A developed RT-qPCR was used to confirm the metagenome results and to determine the importance of this virus. A total of 1554 different boid snakes, including animals suffering from respiratory diseases as well as healthy controls, were screened for nidoviruses. Furthermore, in addition to two full-length sequences, partial sequences were generated from different snake species. Results The assembled full-length snake nidovirus genomes share only an overall genome sequence identity of less than 66.9% to other published snake nidoviruses and new partial sequences vary between 99.89 and 79.4%. Highest viral loads were detected in lung samples. The snake nidovirus was not only present in diseased animals, but also in snakes showing no typical clinical signs. Conclusions Our findings further highlight the possible importance of snake nidoviruses in respiratory diseases and proof multiple circulating strains with varying disease potential. Nidovirus detection in clinical healthy individuals might represent testing during the incubation period or reconvalescence. Our investigations show new aspects of nidovirus infections in pythons. Nidoviruses should be included in routine diagnostic workup of diseased reptiles.
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Affiliation(s)
- Silvia Blahak
- Chemical and Veterinary Investigation Office, Westerfeldstraße 1, D-32758, Detmold, Germany
| | - Maria Jenckel
- Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Südufer 10, D-17493, Greifswald-Insel Riems, Germany.,Commonwealth Scientific and Industrial Research Organisation, Canberra, ACT, 2601, Australia
| | - Dirk Höper
- Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Südufer 10, D-17493, Greifswald-Insel Riems, Germany
| | - Martin Beer
- Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Südufer 10, D-17493, Greifswald-Insel Riems, Germany
| | - Bernd Hoffmann
- Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Südufer 10, D-17493, Greifswald-Insel Riems, Germany
| | - Kore Schlottau
- Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Südufer 10, D-17493, Greifswald-Insel Riems, Germany.
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52
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Campbell LJ, Pawlik AH, Harrison XA. Amphibian ranaviruses in Europe: important directions for future research. Facets (Ott) 2020. [DOI: 10.1139/facets-2020-0007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Ranaviruses are an emerging group of pathogens capable of infecting all cold-blooded vertebrates. In Europe, ranaviruses pose a particularly potent threat to wild amphibian populations. Since the 1980s research on amphibian-infecting ranaviruses in Europe has been growing. The wide distribution of amphibian populations in Europe, the ease with which many are monitored, and the tractable nature of counterpart ex situ experimental systems have provided researchers with a unique opportunity to study many aspects of host–ranavirus interactions in the wild. These characteristics of European amphibian populations will also enable researchers to lead the way as the field of host–ranavirus interactions progresses. In this review, we provide a summary of the current key knowledge regarding amphibian infecting ranaviruses throughout Europe. We then outline important areas of further research and suggest practical ways each could be pursued. We address the study of potential interactions between the amphibian microbiome and ranaviruses, how pollution may exacerbate ranaviral disease either as direct stressors of amphibians or indirect modification of the amphibian microbiome. Finally, we discuss the need for continued surveillance of ranaviral emergence in the face of climate change.
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Affiliation(s)
- Lewis J. Campbell
- Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, WI 53711, USA
| | - Alice H. Pawlik
- Centre for Ecology and Conservation, University of Exeter, Penryn, Cornwall TR10 9FE, UK
| | - Xavier A. Harrison
- Centre for Ecology and Conservation, University of Exeter, Penryn, Cornwall TR10 9FE, UK
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53
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Crocodilepox Virus Evolutionary Genomics Supports Observed Poxvirus Infection Dynamics on Saltwater Crocodile ( Crocodylus porosus). Viruses 2019; 11:v11121116. [PMID: 31810339 PMCID: PMC6950651 DOI: 10.3390/v11121116] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 11/04/2019] [Accepted: 11/29/2019] [Indexed: 12/18/2022] Open
Abstract
Saltwater crocodilepox virus (SwCRV), belonging to the genus Crocodylidpoxvirus, are large DNA viruses posing an economic risk to Australian saltwater crocodile (Crocodylus porosus) farms by extending production times. Although poxvirus-like particles and sequences have been confirmed, their infection dynamics, inter-farm genetic variability and evolutionary relationships remain largely unknown. In this study, a poxvirus infection dynamics study was conducted on two C. porosus farms. One farm (Farm 2) showed twice the infection rate, and more concerningly, an increase in the number of early- to late-stage poxvirus lesions as crocodiles approached harvest size, reflecting the extended production periods observed on this farm. To determine if there was a genetic basis for this difference, 14 complete SwCRV genomes were isolated from lesions sourced from five Australian farms. They encompassed all the conserved genes when compared to the two previously reported SwCRV genomes and fell within three major clades. Farm 2′s SwCRV sequences were distributed across all three clades, highlighting the likely mode of inter-farm transmission. Twenty-four recombination events were detected, with one recombination event resulting in consistent fragmentation of the P4c gene in the majority of the Farm 2 SwCRV isolates. Further investigation into the evolution of poxvirus infection in farmed crocodiles may offer valuable insights in evolution of this viral family and afford the opportunity to obtain crucial information into natural viral selection processes in an in vivo setting.
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54
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Pfitzer S, Boustead KJ, Vorster JH, Du Plessis L, La Grange LJ. Adenoviral hepatitis in two Nile crocodile (Crocodylus niloticus) hatchlings from South Africa. J S Afr Vet Assoc 2019; 90:e1-e4. [PMID: 31793310 PMCID: PMC6890564 DOI: 10.4102/jsava.v90i0.1987] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2019] [Revised: 08/23/2019] [Accepted: 10/14/2019] [Indexed: 11/06/2022] Open
Abstract
Adenoviral infections may cause mild to severe morbidity or fatality in a large array of animal species. In crocodilians, hatchlings under 5 months of age are usually affected. However, there is a paucity of information on actual incidences in hatchlings originating from South Africa. Two cases of adenoviral hepatitis in crocodile hatchlings about 2 weeks old, bred on a commercial farm in South Africa, are described. Both hatchlings showed typical clinical signs of hepatitis. The identification of intranuclear inclusion bodies in the liver was used to differentiate between adenoviral hepatitis and chlamydial hepatitis. Although vertical transmission has never been proven in crocodiles, the young age of the affected hatchlings raises the possibility of vertical transmission. The lack of epidemiological information on adenoviral hepatitis in crocodiles highlights the need for further characterisation of the virus and targeted surveillance.
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Affiliation(s)
- Silke Pfitzer
- Faculty of Agriculture and Natural Sciences, School of Biology and Environmental Sciences, University of Mpumalanga, Nelspruit.
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55
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Pees M, Schmidt V, Papp T, Gellért Á, Abbas M, Starck JM, Neul A, Marschang RE. Three genetically distinct ferlaviruses have varying effects on infected corn snakes (Pantherophis guttatus). PLoS One 2019; 14:e0217164. [PMID: 31163032 PMCID: PMC6548425 DOI: 10.1371/journal.pone.0217164] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2019] [Accepted: 05/06/2019] [Indexed: 01/10/2023] Open
Abstract
Ferlaviruses are important pathogens in snakes and other reptiles. They cause respiratory and neurological disease in infected animals and can cause severe disease outbreaks. Isolates from this genus can be divided into four genogroups–A, B, and C, as well as a more distantly related sister group, “tortoise”. Sequences from large portions (5.3 kb) of the genomes of a variety of ferlavirus isolates from genogroups A, B, and C, including the genes coding the surface glycoproteins F and HN as well as the L protein were determined and compared. In silico analyses of the glycoproteins of genogroup A, B, and C isolates were carried out. Three isolates representing these three genogroups were used in transmission studies with corn snakes (Pantherophis guttatus), and clinical signs, gross and histopathology, electronmicroscopic changes in the lungs, and isolation of bacteria from the lungs were evaluated. Analysis of the sequences supported the previous categorization of ferlaviruses into four genogroups, and criteria for definition of ferlavirus genogroups and species were established based on sequence identities (80% resp. 90%). Analysis of the ferlavirus glycoprotein models showed parallels to corresponding regions of other paramyxoviruses. The transmission studies showed clear differences in the pathogenicities of the three virus isolates used. The genogroup B isolate was the most and the group A virus the least pathogenic. Reasons for these differences were not clear based on the differences in the putative structures of their respective glycoproteins, although e.g. residue and consequential structure variation of an extended cleavage site or changes in electrostatic charges at enzyme binding sites could play a role. The presence of bacteria in the lungs of the infected animals also clearly corresponded to increased pathogenicity. This study contributes to knowledge about the structure and phylogeny of ferlaviruses and lucidly demonstrates differences in pathogenicity between strains of different genogroups.
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Affiliation(s)
- Michael Pees
- Department for Birds and Reptiles, University Teaching Hospital, University of Leipzig, Leipzig, Germany
- * E-mail:
| | - Volker Schmidt
- Department for Birds and Reptiles, University Teaching Hospital, University of Leipzig, Leipzig, Germany
| | - Tibor Papp
- Institute for Veterinary Medical Research, Centre for Agricultural Research, the Hungarian Academy of Sciences, Budapest, Hungary
| | - Ákos Gellért
- Institute for Veterinary Medical Research, Centre for Agricultural Research, the Hungarian Academy of Sciences, Budapest, Hungary
| | - Maha Abbas
- Institute for Environmental and Animal Hygiene, University of Hohenheim, Stuttgart, Germany
| | | | - Annkatrin Neul
- Department for Birds and Reptiles, University Teaching Hospital, University of Leipzig, Leipzig, Germany
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56
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Hyndman TH, Howard JG, Doneley RJ. Adenoviruses in free-ranging Australian bearded dragons (Pogona spp.). Vet Microbiol 2019; 234:72-76. [PMID: 31213274 DOI: 10.1016/j.vetmic.2019.05.014] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2019] [Revised: 05/17/2019] [Accepted: 05/20/2019] [Indexed: 01/28/2023]
Abstract
Adenoviruses are a relatively common infection of reptiles globally and are most often reported in captive central bearded dragons (Pogona vitticeps). We report the first evidence of adenoviruses in bearded dragons in their native habitat in Australia. Oral-cloacal swabs and blood samples were collected from 48 free-ranging bearded dragons from four study populations: western bearded dragons (P. minor minor) from Western Australia (n = 4), central bearded dragons (P. vitticeps) from central Australia (n = 2) and western New South Wales (NSW) (n = 29), and coastal bearded dragons (P. barbata) from south-east Queensland (n = 13). Samples were tested for the presence of adenoviruses using a broadly reactive (pan-adenovirus) PCR and a PCR specific for agamid adenovirus-1. Agamid adenovirus-1 was detected in swabs from eight of the dragons from western NSW and one of the coastal bearded dragons. Lizard atadenovirus A was detected in one of the dragons from western NSW. Adenoviruses were not detected in any blood sample. All bearded dragons, except one, were apparently healthy and so finding these adenoviruses in these animals is consistent with bearded dragons being natural hosts for these viruses.
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Affiliation(s)
- Timothy H Hyndman
- Murdoch University, School of Veterinary Medicine, Murdoch, Western Australia, 6150, Australia.
| | | | - Robert Jt Doneley
- UQ Veterinary Medical Centre, University of Queensland, School of Veterinary Science, Gatton, Queensland 4343, Australia.
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57
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Hofmannová L, Kvičerová J, Bízková K, Modrý D. Intranuclear coccidiosis in tortoises — discovery of its causative agent and transmission. Eur J Protistol 2019; 67:71-76. [DOI: 10.1016/j.ejop.2018.11.002] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2018] [Revised: 10/29/2018] [Accepted: 11/07/2018] [Indexed: 10/27/2022]
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58
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Marschang RE. Virology. MADER'S REPTILE AND AMPHIBIAN MEDICINE AND SURGERY 2019. [PMCID: PMC7173601 DOI: 10.1016/b978-0-323-48253-0.00030-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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59
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Bower DS, Brannelly LA, McDonald CA, Webb RJ, Greenspan SE, Vickers M, Gardner MG, Greenlees MJ. A review of the role of parasites in the ecology of reptiles and amphibians. AUSTRAL ECOL 2018. [DOI: 10.1111/aec.12695] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Deborah S. Bower
- College of Science and Engineering; James Cook University; Townsville Queensland 4811 Australia
- School of Environmental and Rural Science; University of New England; Armidale New South Wales Australia
| | - Laura A. Brannelly
- Department of Biological Sciences; University of Pittsburgh; Pittsburgh Pennsylvania USA
| | - Cait A. McDonald
- Department of Ecology and Evolutionary Biology; Cornell University; Ithaca New York USA
| | - Rebecca J. Webb
- College of Public Health, Medical and Veterinary Sciences; James Cook University; Townsville Queensland Australia
| | - Sasha E. Greenspan
- Department of Biological Sciences; University of Alabama; Tuscaloosa Alabama USA
| | - Mathew Vickers
- College of Science and Engineering; James Cook University; Townsville Queensland 4811 Australia
| | - Michael G. Gardner
- College of Science and Engineering; Flinders University; Adelaide South Australia Australia
- Evolutionary Biology Unit; South Australian Museum; Adelaide South Australia Australia
| | - Matthew J. Greenlees
- School of Life and Environmental Sciences; University of Sydney; Sydney New South Wales Australia
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60
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Campbell LJ, Garner TWJ, Tessa G, Scheele BC, Griffiths AGF, Wilfert L, Harrison XA. An emerging viral pathogen truncates population age structure in a European amphibian and may reduce population viability. PeerJ 2018; 6:e5949. [PMID: 30479902 PMCID: PMC6241393 DOI: 10.7717/peerj.5949] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2018] [Accepted: 10/17/2018] [Indexed: 11/20/2022] Open
Abstract
Infectious diseases can alter the demography of their host populations, reducing their viability even in the absence of mass mortality. Amphibians are the most threatened group of vertebrates globally, and emerging infectious diseases play a large role in their continued population declines. Viruses belonging to the genus Ranavirus are responsible for one of the deadliest and most widespread of these diseases. To date, no work has used individual level data to investigate how ranaviruses affect population demographic structure. We used skeletochronology and morphology to evaluate the impact of ranaviruses on the age structure of populations of the European common frog (Rana temporaria) in the UK. We compared ecologically similar populations that differed most notably in their historical presence or absence of ranavirosis (the acute syndrome caused by ranavirus infection). Our results suggest that ranavirosis may truncate the age structure of R. temporaria populations. One potential explanation for such a shift might be increased adult mortality and subsequent shifts in the life history of younger age classes that increase reproductive output earlier in life. Additionally, we constructed population projection models which indicated that such increased adult mortality could heighten the vulnerability of frog populations to stochastic environmental challenges.
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Affiliation(s)
- Lewis J Campbell
- Environment and Sustainability Institute, University of Exeter, Penryn, UK.,Institute of Zoology, Zoological Society of London, London, UK.,Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI, USA
| | | | - Giulia Tessa
- Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | - Benjamin C Scheele
- Fenner School of Environment and Society, Australian National University, Canberra, ACT, Australia
| | | | - Lena Wilfert
- Centre for Ecology and Conservation, University of Exeter, Penryn, UK.,Institute of Evolutionary Ecology and Conservation Genomics, Universität Ulm, Ulm, Germany
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61
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Zhang J, Finlaison DS, Frost MJ, Gestier S, Gu X, Hall J, Jenkins C, Parrish K, Read AJ, Srivastava M, Rose K, Kirkland PD. Identification of a novel nidovirus as a potential cause of large scale mortalities in the endangered Bellinger River snapping turtle (Myuchelys georgesi). PLoS One 2018; 13:e0205209. [PMID: 30356240 PMCID: PMC6200216 DOI: 10.1371/journal.pone.0205209] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2018] [Accepted: 09/20/2018] [Indexed: 12/28/2022] Open
Abstract
In mid-February 2015, a large number of deaths were observed in the sole extant population of an endangered species of freshwater snapping turtle, Myuchelys georgesi, in a coastal river in New South Wales, Australia. Mortalities continued for approximately 7 weeks and affected mostly adult animals. More than 400 dead or dying animals were observed and population surveys conducted after the outbreak had ceased indicated that only a very small proportion of the population had survived, severely threatening the viability of the wild population. At necropsy, animals were in poor body condition, had bilateral swollen eyelids and some animals had tan foci on the skin of the ventral thighs. Histological examination revealed peri-orbital, splenic and nephric inflammation and necrosis. A virus was isolated in cell culture from a range of tissues. Nucleic acid sequencing of the virus isolate has identified the entire genome and indicates that this is a novel nidovirus that has a low level of nucleotide similarity to recognised nidoviruses. Its closest relatives are nidoviruses that have recently been described in pythons and lizards, usually in association with respiratory disease. In contrast, in the affected turtles, the most significant pathological changes were in the kidneys. Real time PCR assays developed to detect this virus demonstrated very high virus loads in affected tissues. In situ hybridisation studies confirmed the presence of viral nucleic acid in tissues in association with pathological changes. Collectively these data suggest that this virus is the likely cause of the mortalities that now threaten the survival of this species. Bellinger River Virus is the name proposed for this new virus.
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Affiliation(s)
- Jing Zhang
- Virology Laboratory, Elizabeth Macarthur Agriculture Institute, Menangle, New South Wales, Australia
| | - Deborah S. Finlaison
- Virology Laboratory, Elizabeth Macarthur Agriculture Institute, Menangle, New South Wales, Australia
| | - Melinda J. Frost
- Virology Laboratory, Elizabeth Macarthur Agriculture Institute, Menangle, New South Wales, Australia
| | - Sarah Gestier
- Virology Laboratory, Elizabeth Macarthur Agriculture Institute, Menangle, New South Wales, Australia
| | - Xingnian Gu
- Virology Laboratory, Elizabeth Macarthur Agriculture Institute, Menangle, New South Wales, Australia
| | - Jane Hall
- Australian Registry of Wildlife Health, Taronga Conservation Society Australia, Bradleys Head Road, Mosman, New South Wales, Australia
| | - Cheryl Jenkins
- Microbiology and Parasitology, Elizabeth Macarthur Agriculture Institute, Menangle, New South Wales, Australia
| | - Kate Parrish
- Virology Laboratory, Elizabeth Macarthur Agriculture Institute, Menangle, New South Wales, Australia
| | - Andrew J. Read
- Virology Laboratory, Elizabeth Macarthur Agriculture Institute, Menangle, New South Wales, Australia
| | - Mukesh Srivastava
- Virology Laboratory, Elizabeth Macarthur Agriculture Institute, Menangle, New South Wales, Australia
| | - Karrie Rose
- Australian Registry of Wildlife Health, Taronga Conservation Society Australia, Bradleys Head Road, Mosman, New South Wales, Australia
| | - Peter D. Kirkland
- Virology Laboratory, Elizabeth Macarthur Agriculture Institute, Menangle, New South Wales, Australia
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62
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Dermatological conditions of farmed Crocodilians: A review of pathogenic agents and their proposed impact on skin quality. Vet Microbiol 2018; 225:89-100. [PMID: 30322539 DOI: 10.1016/j.vetmic.2018.09.022] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2018] [Revised: 09/18/2018] [Accepted: 09/19/2018] [Indexed: 01/24/2023]
Abstract
The control of pathogens that target crocodilian skin is essential to the long-term success and sustainability of intensive farming operations worldwide. To understand the impact these pathogens may have on the skin, a brief overview of skin histology is given. A review of the known viral, bacterial, fungal and helminth taxa associated with skin conditions in commercially significant crocodilian species is presented. Best management practices are discussed, with an emphasis on addressing extrinsic factors that influence transmission and pathogenicity. It is argued that, in the past, reduced immune function arising from inadequate thermal regulation was the leading cause of skin disease in captive crocodilians. Consequently, innovations such as temperature control, coupled with the adoption of more stringent hygiene standards, have greatly reduced the prevalence of many infectious skin conditions in intensively farmed populations. However, despite improvements in animal husbandry and disease management, viral pathogens such as West Nile virus, herpesvirus and poxvirus continue to afflict crocodilians in modern captive production systems.
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63
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Prado-Irwin SR, van de Schoot M, Geneva AJ. Detection and phylogenetic analysis of adenoviruses occurring in a single anole species. PeerJ 2018; 6:e5521. [PMID: 30186692 PMCID: PMC6119460 DOI: 10.7717/peerj.5521] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2018] [Accepted: 08/06/2018] [Indexed: 01/30/2023] Open
Abstract
Adenoviruses (AdVs) infect a wide range of hosts, and they have undergone recent and ancient host transfers multiple times. In reptiles, AdVs have been found in many captive individuals, and have been implicated in morbidity and mortality in several species. Yet the pathogenicity, transmission, phylogenetic distribution, and source of AdVs in the environment are still unknown. We therefore chose to opportunistically sample deceased captive Anolis sagrei individuals that were collected from different populations in the Bahamas and the Cayman Islands, as well as fecal samples from one island population, to explore the disease dynamics and diversity of adenovirus infecting A. sagrei populations. We found that adenovirus infection was present in our captive colony at low prevalence (26%), and was likely not the primary cause of observed morbidity and mortality. Among the 10 individuals (out of 38 sampled) which tested positive for adenovirus, we identified four adenovirus clades, several of which are distantly related, despite the close relationships of the A. sagrei host populations. These results suggest that while adenovirus may not be highly prevalent in the wild, it is present at low levels across much of the range of A. sagrei. It may undergo frequent host switching across both deep and shallow host divergences.
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Affiliation(s)
- Sofia R. Prado-Irwin
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
| | - Martijn van de Schoot
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
- Plant Ecology and Nature Conservation Group, Wageningen University, Wageningen, Netherlands
| | - Anthony J. Geneva
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
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64
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Genome Sequence of a Single-Stranded DNA Virus Identified in Gila Monster Feces. Microbiol Resour Announc 2018; 7:MRA00925-18. [PMID: 30533904 PMCID: PMC6256441 DOI: 10.1128/mra.00925-18] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2018] [Accepted: 07/24/2018] [Indexed: 11/21/2022] Open
Abstract
The Gila monster (Heloderma suspectum) is native to the Sonoran Desert. Metagenomic analyses of a Gila monster fecal sample revealed the presence of a small, circular, single-stranded DNA virus that is most closely related to a gemykrogvirus (family Genomoviridae) genome from caribou feces sharing 88% genome-wide pairwise identity. The Gila monster (Heloderma suspectum) is native to the Sonoran Desert. Metagenomic analyses of a Gila monster fecal sample revealed the presence of a small, circular, single-stranded DNA virus that is most closely related to a gemykrogvirus (family Genomoviridae) genome from caribou feces sharing 88% genome-wide pairwise identity.
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65
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Marenzoni ML, Santoni L, Felici A, Maresca C, Stefanetti V, Sforna M, Franciosini MP, Casagrande Proietti P, Origgi FC. Clinical, virological and epidemiological characterization of an outbreak of Testudinid Herpesvirus 3 in a chelonian captive breeding facility: Lessons learned and first evidence of TeHV3 vertical transmission. PLoS One 2018; 13:e0197169. [PMID: 29746560 PMCID: PMC5944942 DOI: 10.1371/journal.pone.0197169] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2017] [Accepted: 04/27/2018] [Indexed: 11/19/2022] Open
Abstract
Testudinid herpesviruses (TeHVs) have a worldwide distribution among tortoises. However, information such as risk factors promoting the occurrence or the recrudescence of the associated disease and the mid-term sequelae of an outbreak comprising the extent and dynamic of the viral shedding have been only minimally investigated. Critical management information is also lacking or anecdotal. Furthermore, major aspects of the viral pathogenesis including the likelihood of vertical transmission of the virus are virtually unknown. The present study describes the occurrence and the management of an outbreak of Testudinid herpesvirus genotype 3 (TeHV3) in a large, private collection of chelonians. Clinical, pathological, molecular and serological characterization of the outbreak were carried out. Seventy-five percent of the infected tortoises died. Complementation of molecular and serological testing was a critical point for successful management implementations. A case-control study was performed to analyze possible risk factors associated with the infection. Furthermore, a subgroup of six asymptomatic infected tortoises was monitored for two consecutive seasons after the outbreak: all the infected tortoises were determined to be intermittent shedders, except one, which was a persistent shedder. Post-hibernation was associated with the highest number of shedders. Finally, evidence of the most likely vertical transmission of the virus was obtained for the first time.
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Affiliation(s)
| | | | - Andrea Felici
- Istituto Zooprofilattico Sperimentale of Umbria and Marche, Perugia, Italy
| | - Carmen Maresca
- Istituto Zooprofilattico Sperimentale of Umbria and Marche, Perugia, Italy
| | | | - Monica Sforna
- Department of Veterinary Medicine, University of Perugia, Perugia, Italy
| | | | | | - Francesco Carlo Origgi
- Institute of Veterinary Bacteriology, Centre for Fish and Wildlife Health, Vetsuisse Faculty, University of Bern, Bern, Switzerland
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Mashkour N, Maclaine A, Burgess GW, Ariel E. Discovery of an Australian Chelonia mydas papillomavirus via green turtle primary cell culture and qPCR. J Virol Methods 2018; 258:13-23. [PMID: 29630942 DOI: 10.1016/j.jviromet.2018.04.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2017] [Revised: 04/04/2018] [Accepted: 04/04/2018] [Indexed: 11/29/2022]
Abstract
The number of reptilian viruses detected are continuously increasing due to improvements and developments of new diagnostic techniques. In this case we used primary cell culture and qPCR to describe the first Australian Chelonia mydas papillomavirus. Commercial chelonian cell lines are limited to one cell line from a terrestrial turtle (Terrapene Carolina). To establish primary cultures from green turtles (Chelonia mydas), turtle eggs were collected from Heron Island, Queensland, Australia. From day 35 of incubation at 29°, the embryos were harvested to establish primary cultures. The primary cell cultures were grown in Dulbecco's Modified Eagle Medium, 90% and foetal bovine serum, 10%. The cells became uniformly fibroblastic-shaped after 15 passages. The growth rate resembled that of cells originating from other cold-blooded animals and the average doubling time was ∼5 days from the 20th passage. Karyotyping and molecular analysis of mitochondrial DNA D-loop gene were carried out for cell authentication. The primary cell cultures were screened to exclude mycoplasma contamination. Two primary cell lineages were found to be susceptible to Bohle iridovirus. The primary cell cultures were used to screen samples from green turtles foraging along the East Coast of Queensland for the presence of viruses. Homogenates from eight skin tumour samples caused cytopathic effects and were confirmed by qPCR to be infected with papillomavirus.
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Affiliation(s)
- Narges Mashkour
- College of Public Health, Medical and Veterinary Sciences, James Cook University, Townsville, 4811, QLD, Australia.
| | - Alicia Maclaine
- College of Public Health, Medical and Veterinary Sciences, James Cook University, Townsville, 4811, QLD, Australia
| | - Graham W Burgess
- College of Public Health, Medical and Veterinary Sciences, James Cook University, Townsville, 4811, QLD, Australia
| | - Ellen Ariel
- College of Public Health, Medical and Veterinary Sciences, James Cook University, Townsville, 4811, QLD, Australia
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67
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Sarker S, Isberg SR, Milic NL, Lock P, Helbig KJ. Molecular characterization of the first saltwater crocodilepox virus genome sequences from the world's largest living member of the Crocodylia. Sci Rep 2018; 8:5623. [PMID: 29618766 PMCID: PMC5884845 DOI: 10.1038/s41598-018-23955-6] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2017] [Accepted: 03/20/2018] [Indexed: 12/21/2022] Open
Abstract
Crocodilepox virus is a large dsDNA virus belonging to the genus Crocodylidpoxvirus, which infects a wide range of host species in the order Crocodylia worldwide. Here, we present genome sequences for a novel saltwater crocodilepox virus, with two subtypes (SwCRV-1 and -2), isolated from the Australian saltwater crocodile. Affected belly skins of juvenile saltwater crocodiles were used to sequence complete viral genomes, and perform electron microscopic analysis that visualized immature and mature virions. Analysis of the SwCRV genomes showed a high degree of sequence similarity to CRV (84.53% and 83.70%, respectively), with the novel SwCRV-1 and -2 complete genome sequences missing 5 and 6 genes respectively when compared to CRV, but containing 45 and 44 predicted unique genes. Similar to CRV, SwCRV also lacks the genes involved in virulence and host range, however, considering the presence of numerous hypothetical and or unique genes in the SwCRV genomes, it is completely reasonable that the genes encoding these functions are present but not recognized. Phylogenetic analysis suggested a monophyletic relationship between SwCRV and CRV, however, SwCRV is quite distinct from other chordopoxvirus genomes. These are the first SwCRV complete genome sequences isolated from saltwater crocodile skin lesions.
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Affiliation(s)
- Subir Sarker
- Department of Physiology, Anatomy and Microbiology, School of Life Sciences, La Trobe University, Bundoora, VIC 3086, Australia.
| | - Sally R Isberg
- Centre for Crocodile Research, Noonamah, NT, Australia.,School of Psychological and Clinical Sciences, Charles Darwin University, Darwin, NT, Australia
| | - Natalie L Milic
- School of Psychological and Clinical Sciences, Charles Darwin University, Darwin, NT, Australia
| | - Peter Lock
- La Trobe Institute for Molecular Science, La Trobe University, Bundoora, VIC, Australia
| | - Karla J Helbig
- Department of Physiology, Anatomy and Microbiology, School of Life Sciences, La Trobe University, Bundoora, VIC 3086, Australia
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68
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Respiratory disease in ball pythons (Python regius) experimentally infected with ball python nidovirus. Virology 2018; 517:77-87. [DOI: 10.1016/j.virol.2017.12.008] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2017] [Revised: 12/01/2017] [Accepted: 12/11/2017] [Indexed: 01/22/2023]
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69
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Invertebrate Iridoviruses: A Glance over the Last Decade. Viruses 2018; 10:v10040161. [PMID: 29601483 PMCID: PMC5923455 DOI: 10.3390/v10040161] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2017] [Revised: 02/21/2018] [Accepted: 02/23/2018] [Indexed: 02/06/2023] Open
Abstract
Members of the family Iridoviridae (iridovirids) are large dsDNA viruses that infect both invertebrate and vertebrate ectotherms and whose symptoms range in severity from minor reductions in host fitness to systemic disease and large-scale mortality. Several characteristics have been useful for classifying iridoviruses; however, novel strains are continuously being discovered and, in many cases, reliable classification has been challenging. Further impeding classification, invertebrate iridoviruses (IIVs) can occasionally infect vertebrates; thus, host range is often not a useful criterion for classification. In this review, we discuss the current classification of iridovirids, focusing on genomic and structural features that distinguish vertebrate and invertebrate iridovirids and viral factors linked to host interactions in IIV6 (Invertebrate iridescent virus 6). In addition, we show for the first time how complete genome sequences of viral isolates can be leveraged to improve classification of new iridovirid isolates and resolve ambiguous relations. Improved classification of the iridoviruses may facilitate the identification of genus-specific virulence factors linked with diverse host phenotypes and host interactions.
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70
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Campbell LJ, Hammond SA, Price SJ, Sharma MD, Garner TWJ, Birol I, Helbing CC, Wilfert L, Griffiths AGF. A novel approach to wildlife transcriptomics provides evidence of disease-mediated differential expression and changes to the microbiome of amphibian populations. Mol Ecol 2018; 27:1413-1427. [PMID: 29420865 DOI: 10.1111/mec.14528] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2017] [Revised: 01/31/2018] [Accepted: 02/01/2018] [Indexed: 01/01/2023]
Abstract
Ranaviruses are responsible for a lethal, emerging infectious disease in amphibians and threaten their populations throughout the world. Despite this, little is known about how amphibian populations respond to ranaviral infection. In the United Kingdom, ranaviruses impact the common frog (Rana temporaria). Extensive public engagement in the study of ranaviruses in the UK has led to the formation of a unique system of field sites containing frog populations of known ranaviral disease history. Within this unique natural field system, we used RNA sequencing (RNA-Seq) to compare the gene expression profiles of R. temporaria populations with a history of ranaviral disease and those without. We have applied a RNA read-filtering protocol that incorporates Bloom filters, previously used in clinical settings, to limit the potential for contamination that comes with the use of RNA-Seq in nonlaboratory systems. We have identified a suite of 407 transcripts that are differentially expressed between populations of different ranaviral disease history. This suite contains genes with functions related to immunity, development, protein transport and olfactory reception among others. A large proportion of potential noncoding RNA transcripts present in our differentially expressed set provide first evidence of a possible role for long noncoding RNA (lncRNA) in amphibian response to viruses. Our read-filtering approach also removed significantly more bacterial reads from libraries generated from positive disease history populations. Subsequent analysis revealed these bacterial read sets to represent distinct communities of bacterial species, which is suggestive of an interaction between ranavirus and the host microbiome in the wild.
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Affiliation(s)
- Lewis J Campbell
- Environment and Sustainability Institute, University of Exeter, Penryn, UK.,Institute of Zoology, Zoological Society of London, London, UK
| | - Stewart A Hammond
- Canada's Michael Smith Genome Sciences Centre, British Columbia Cancer Agency, Vancouver, BC, Canada
| | - Stephen J Price
- Institute of Zoology, Zoological Society of London, London, UK.,UCL Genetics Institute, University College London, London, UK
| | - Manmohan D Sharma
- Centre for Ecology and Conservation, University of Exeter, Penryn, UK
| | | | - Inanc Birol
- Canada's Michael Smith Genome Sciences Centre, British Columbia Cancer Agency, Vancouver, BC, Canada
| | - Caren C Helbing
- Department of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada
| | - Lena Wilfert
- Centre for Ecology and Conservation, University of Exeter, Penryn, UK
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71
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Lindemann DM, Allender MC, Thompson D, Adamovicz L, Dzhaman E. Development and validation of a quantitative PCR assay for detection of Emydoidea herpesvirus 1 in free-ranging Blanding's turtles (Emydoidea blandingii). J Virol Methods 2018; 254:40-45. [PMID: 29360549 DOI: 10.1016/j.jviromet.2018.01.006] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2017] [Revised: 12/08/2017] [Accepted: 01/19/2018] [Indexed: 10/18/2022]
Abstract
Blanding's turtles (Emydoidea blandingii), an endangered species in Illinois, have experienced range-wide declines because of habitat degradation and fragmentation, predation, and road mortality. While ongoing studies are crucial to a thorough understanding of the natural history and demographics in these disjointed Illinois populations, infectious disease threats have been largely unevaluated. Herpesvirus outbreaks have been associated with high morbidity and mortality in populations of captive tortoises and turtles worldwide, including the family Emydidae (pond and box turtles). However, novel herpesviruses including Terrapene herpesvirus 1, Emydid herpesvirus 1 and 2, and Glyptemys herpesvirus 1 and 2, have recently been identified in apparently healthy free-ranging freshwater turtles. In 2015, 20 free-ranging Blanding's turtles in DuPage County, Illinois were screened for a herpesvirus using consensus PCR. A novel herpesvirus species (Emydoidea herpesvirus 1; EBHV1) was identified in two animals and shared a high degree of sequence homology to other freshwater turtle herpesviruses. Two quantitative real-time PCR assays, using EBHV1 primer-1 and primer-2, were developed to target an EBHV1-specific segment of the DNA-dependent DNA polymerase gene and validated. Both assays performed with high efficiency (slope = -3.2; R2 = 1), low intra-assay variability, and low inter-assay variability (coefficient of variation <2% at all dilutions). However, EBHV1 primer-2 displayed less variation and was selected to test clinical samples and five closely related herpesvirus control samples. Results indicate that this assay is specific for EBHV1, has a linear range of detection from 108 to 101 viral copies per reaction, and can categorically detect as few as 1 viral copy per reaction. This qPCR assay provides a valuable diagnostic tool for future characterization of EBHV1 epidemiology.
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Affiliation(s)
- Dana M Lindemann
- Wildlife Epidemiology Laboratory, Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Urbana, IL 61802, USA.
| | - Matthew C Allender
- Wildlife Epidemiology Laboratory, Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Urbana, IL 61802, USA
| | - Dan Thompson
- Forest Preserve District of DuPage County, Wheaton, IL 60189, USA
| | - Laura Adamovicz
- Wildlife Epidemiology Laboratory, Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Urbana, IL 61802, USA
| | - Elena Dzhaman
- Wildlife Epidemiology Laboratory, Department of Veterinary Clinical Medicine, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Urbana, IL 61802, USA
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72
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Elbers JP, Brown MB, Taylor SS. Identifying genome-wide immune gene variation underlying infectious disease in wildlife populations - a next generation sequencing approach in the gopher tortoise. BMC Genomics 2018; 19:64. [PMID: 29351737 PMCID: PMC5775545 DOI: 10.1186/s12864-018-4452-0] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Accepted: 01/15/2018] [Indexed: 11/25/2022] Open
Abstract
Background Infectious disease is the single greatest threat to taxa such as amphibians (chytrid fungus), bats (white nose syndrome), Tasmanian devils (devil facial tumor disease), and black-footed ferrets (canine distemper virus, plague). Although understanding the genetic basis to disease susceptibility is important for the long-term persistence of these groups, most research has been limited to major-histocompatibility and Toll-like receptor genes. To better understand the genetic basis of infectious disease susceptibility in a species of conservation concern, we sequenced all known/predicted immune response genes (i.e., the immunomes) in 16 Florida gopher tortoises, Gopherus polyphemus. All tortoises produced antibodies against Mycoplasma agassizii (an etiologic agent of infectious upper respiratory tract disease; URTD) and, at the time of sampling, either had (n = 10) or lacked (n = 6) clinical signs. Results We found several variants associated with URTD clinical status in complement and lectin genes, which may play a role in Mycoplasma immunity. Thirty-five genes deviated from neutrality according to Tajima’s D. These genes were enriched in functions relating to macromolecule and protein modifications, which are vital to immune system functioning. Conclusions These results are suggestive of genetic differences that might contribute to disease severity, a finding that is consistent with other mycoplasmal diseases. This has implications for management because tortoises across their range may possess genetic variation associated with a more severe response to URTD. More generally: 1) this approach demonstrates that a broader consideration of immune genes is better able to identify important variants, and; 2) this data pipeline can be adopted to identify alleles associated with disease susceptibility or resistance in other taxa, and therefore provide information on a population’s risk of succumbing to disease, inform translocations to increase genetic variation for disease resistance, and help to identify potential treatments. Electronic supplementary material The online version of this article (10.1186/s12864-018-4452-0) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Jean P Elbers
- School of Renewable Natural Resources, 227 RNR Bldg., Louisiana State University and AgCenter, Baton Rouge, LA, 70803, USA.
| | - Mary B Brown
- Department of Infectious Diseases and Pathology, College of Veterinary Medicine, University of Florida, Gainesville, FL, 32611, USA
| | - Sabrina S Taylor
- School of Renewable Natural Resources, 227 RNR Bldg., Louisiana State University and AgCenter, Baton Rouge, LA, 70803, USA
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73
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Sarker S, Wang Y, Warren-Smith B, Helbig KJ. Dynamic Changes in Host Gene Expression following In Vitro Viral Mimic Stimulation in Crocodile Cells. Front Immunol 2017; 8:1634. [PMID: 29213275 PMCID: PMC5702629 DOI: 10.3389/fimmu.2017.01634] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2017] [Accepted: 11/09/2017] [Indexed: 11/21/2022] Open
Abstract
The initial control of viral infection in a host is dominated by a very well orchestrated early innate immune system; however, very little is known about the ability of a host to control viral infection outside of mammals. The reptiles offer an evolutionary bridge between the fish and mammals, with the crocodile having evolved from the archosauria clade that included the dinosaurs, and being the largest living reptile species. Using an RNA-seq approach, we have defined the dynamic changes of a passaged primary crocodile cell line to stimulation with both RNA and DNA viral mimics. Cells displayed a marked upregulation of many genes known to be involved in the mammalian response to viral infection, including viperin, Mx1, IRF7, IRF1, and RIG-I with approximately 10% of the genes being uncharacterized transcripts. Both pathway and genome analysis suggested that the crocodile may utilize the main known mammalian TLR and cytosolic antiviral RNA signaling pathways, with the pathways being responsible for sensing DNA viruses less clear. Viral mimic stimulation upregulated the type I interferon, IFN-Omega, with many known antiviral interferon-stimulated genes also being upregulated. This work demonstrates for the first time that reptiles show functional regulation of many known and unknown antiviral pathways and effector genes. An enhanced knowledge of these ancient antiviral pathways will not only add to our understanding of the host antiviral innate response in non-mammalian species, but is critical to fully comprehend the complexity of the mammalian innate immune response to viral infection.
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Affiliation(s)
- Subir Sarker
- Department of Physiology, Anatomy and Microbiology, School of Life Sciences, La Trobe University, Melbourne, VIC, Australia
| | - Yinan Wang
- Genomics Research Platform, La Trobe University, Melbourne, VIC, Australia
| | - Brenden Warren-Smith
- Department of Physiology, Anatomy and Microbiology, School of Life Sciences, La Trobe University, Melbourne, VIC, Australia
| | - Karla J Helbig
- Department of Physiology, Anatomy and Microbiology, School of Life Sciences, La Trobe University, Melbourne, VIC, Australia
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74
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Menéndez-Conejero R, Nguyen TH, Singh AK, Condezo GN, Marschang RE, van Raaij MJ, San Martín C. Structure of a Reptilian Adenovirus Reveals a Phage Tailspike Fold Stabilizing a Vertebrate Virus Capsid. Structure 2017; 25:1562-1573.e5. [PMID: 28943338 DOI: 10.1016/j.str.2017.08.007] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2017] [Revised: 07/20/2017] [Accepted: 08/15/2017] [Indexed: 01/20/2023]
Abstract
Although non-human adenoviruses (AdVs) might offer solutions to problems posed by human AdVs as therapeutic vectors, little is known about their basic biology. In particular, there are no structural studies on the complete virion of any AdV with a non-mammalian host. We combine mass spectrometry, cryo-electron microscopy, and protein crystallography to characterize the composition and structure of a snake AdV (SnAdV-1, Atadenovirus genus). SnAdV-1 particles contain the genus-specific proteins LH3, p32k, and LH2, a previously unrecognized structural component. Remarkably, the cementing protein LH3 has a trimeric β helix fold typical of bacteriophage host attachment proteins. The organization of minor coat proteins differs from that in human AdVs, correlating with higher thermostability in SnAdV-1. These findings add a new piece to the intriguing puzzle of virus evolution, hint at the use of cell entry pathways different from those in human AdVs, and will help development of new, thermostable SnAdV-1-based vectors.
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Affiliation(s)
- Rosa Menéndez-Conejero
- Departamento de Estructura de Macromoléculas, Centro Nacional de Biotecnología (CNB-CSIC), Darwin 3, 28049 Madrid, Spain
| | - Thanh H Nguyen
- Departamento de Estructura de Macromoléculas, Centro Nacional de Biotecnología (CNB-CSIC), Darwin 3, 28049 Madrid, Spain; Genetic Engineering Laboratory, Institute of Biotechnology (IBT-VAST), 18 Hoang Quoc Viet, Cau Giay, Hanoi, Vietnam
| | - Abhimanyu K Singh
- Departamento de Estructura de Macromoléculas, Centro Nacional de Biotecnología (CNB-CSIC), Darwin 3, 28049 Madrid, Spain
| | - Gabriela N Condezo
- Departamento de Estructura de Macromoléculas, Centro Nacional de Biotecnología (CNB-CSIC), Darwin 3, 28049 Madrid, Spain
| | | | - Mark J van Raaij
- Departamento de Estructura de Macromoléculas, Centro Nacional de Biotecnología (CNB-CSIC), Darwin 3, 28049 Madrid, Spain.
| | - Carmen San Martín
- Departamento de Estructura de Macromoléculas, Centro Nacional de Biotecnología (CNB-CSIC), Darwin 3, 28049 Madrid, Spain.
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75
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Price SJ, Wadia A, Wright ON, Leung WTM, Cunningham AA, Lawson B. Screening of a long-term sample set reveals two Ranavirus lineages in British herpetofauna. PLoS One 2017; 12:e0184768. [PMID: 28931029 PMCID: PMC5607163 DOI: 10.1371/journal.pone.0184768] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2017] [Accepted: 08/30/2017] [Indexed: 11/18/2022] Open
Abstract
Reports of severe disease outbreaks in amphibian communities in mainland Europe due to strains of the common midwife toad virus (CMTV)-like clade of Ranavirus are increasing and have created concern due to their considerable population impacts. In Great Britain, viruses in another clade of Ranavirus-frog virus 3 (FV3)-like-have caused marked declines of common frog (Rana temporaria) populations following likely recent virus introductions. The British public has been reporting mortality incidents to a citizen science project since 1992, with carcasses submitted for post-mortem examination, resulting in a long-term tissue archive spanning 25 years. We screened this archive for ranavirus (458 individuals from 228 incidents) using molecular methods and undertook preliminary genotyping of the ranaviruses detected. In total, ranavirus was detected in 90 individuals from 41 incidents focused in the north and south of England. The majority of detections involved common frogs (90%) but also another anuran, a caudate and a reptile. Most incidents were associated with FV3-like viruses but two, separated by 300 km and 16 years, involved CMTV-like viruses. These British CMTV-like viruses were more closely related to ranaviruses from mainland Europe than to each other and were estimated to have diverged at least 458 years ago. This evidence of a CMTV-like virus in Great Britain in 1995 represents the earliest confirmed case of a CMTV associated with amphibians and raises important questions about the history of ranavirus in Great Britain and the epidemiology of CMTV-like viruses. Despite biases present in the opportunistic sample used, this study also demonstrates the role of citizen science projects in generating resources for research and the value of maintaining long-term wildlife tissue archives.
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Affiliation(s)
- Stephen J. Price
- UCL Genetics Institute, Gower Street, London, United Kingdom
- Institute of Zoology, ZSL, Regents Park, London, United Kingdom
- * E-mail:
| | - Alexandra Wadia
- Institute of Zoology, ZSL, Regents Park, London, United Kingdom
- University of York, York, United Kingdom
| | - Owen N. Wright
- Institute of Zoology, ZSL, Regents Park, London, United Kingdom
- School of Biosciences, Cardiff University, Cardiff, Wales, United Kingdom
| | | | | | - Becki Lawson
- Institute of Zoology, ZSL, Regents Park, London, United Kingdom
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76
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Kolesnik E, Obiegala A, Marschang RE. Detection of Mycoplasma spp., herpesviruses, topiviruses, and ferlaviruses in samples from chelonians in Europe. J Vet Diagn Invest 2017; 29:820-832. [DOI: 10.1177/1040638717722387] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023] Open
Abstract
We tested samples from 1,015 chelonians in Europe for Mycoplasma spp., herpesviruses, ranaviruses, picornaviruses, and ferlaviruses by PCR. Mycoplasma spp. were detected in 42.1% and herpesviruses were detected in 8.0% of tested chelonians. Differentiation of the herpesviruses revealed that 46.9% of the detected chelonian viruses were testudinid herpesvirus 1 (TeHV-1) and 54.3% were TeHV-3, including co-detections of TeHV-1 and -3 in 3 tortoises. TeHV-4 was detected in a leopard tortoise ( Stigmochelys pardalis), and a herpesvirus that could not be further characterized was found in a pond slider ( Trachemys scripta). Picornaviruses (topiviruses) were detected in 2.2% of the tested animals; ferlaviruses were found in 0.6%; no ranaviruses were detected in any of the animals tested. Mycoplasma spp. were detected significantly more often in Horsfield’s tortoises ( Testudo horsfieldii), leopard tortoises, and Indian star tortoises ( Geochelone elegans) than in other species. Horsfield’s tortoises were also significantly more often positive for TeHV-1. Mycoplasma and TeHV-1 were co-detected in 3.0%, and mycoplasma and TeHV-3 in 2.3%. The TeHV-4–positive tortoise was also positive for mycoplasma. Mycoplasma and picornaviruses were co-detected in 1.2% of the tortoises. A spur-thighed tortoise ( Testudo graeca) was positive for mycoplasma and a ferlavirus. In some cases, >2 pathogens were detected. A significant correlation between mycoplasma and herpesvirus detection was found. Of all tested animals, 47.6% were positive for at least one pathogen, demonstrating the importance of pathogen detection in captive chelonians.
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Affiliation(s)
- Ekaterina Kolesnik
- Laboklin GmbH & Co. KG, Bad Kissingen, Germany (Kolesnik, Marschang)
- Institut of Animal Hygiene, University of Leipzig, Leipzig, Germany (Obiegala)
| | - Anna Obiegala
- Laboklin GmbH & Co. KG, Bad Kissingen, Germany (Kolesnik, Marschang)
- Institut of Animal Hygiene, University of Leipzig, Leipzig, Germany (Obiegala)
| | - Rachel E. Marschang
- Laboklin GmbH & Co. KG, Bad Kissingen, Germany (Kolesnik, Marschang)
- Institut of Animal Hygiene, University of Leipzig, Leipzig, Germany (Obiegala)
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77
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Diversity of large DNA viruses of invertebrates. J Invertebr Pathol 2017; 147:4-22. [DOI: 10.1016/j.jip.2016.08.001] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2016] [Revised: 08/03/2016] [Accepted: 08/04/2016] [Indexed: 11/17/2022]
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78
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Agha M, Price SJ, Nowakowski AJ, Augustine B, Todd BD. Mass mortality of eastern box turtles with upper respiratory disease following atypical cold weather. DISEASES OF AQUATIC ORGANISMS 2017; 124:91-100. [PMID: 28425422 DOI: 10.3354/dao03122] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Emerging infectious diseases cause population declines in many ectotherms, with outbreaks frequently punctuated by periods of mass mortality. It remains unclear, however, whether thermoregulation by ectotherms and variation in environmental temperature is associated with mortality risk and disease progression, especially in wild populations. Here, we examined environmental and body temperatures of free-ranging eastern box turtles Terrapene carolina during a mass die-off coincident with upper respiratory disease. We recorded deaths of 17 turtles that showed clinical signs of upper respiratory disease among 76 adult turtles encountered in Berea, Kentucky (USA), in 2014. Of the 17 mortalities, 11 occurred approximately 14 d after mean environmental temperature dropped 2.5 SD below the 3 mo mean. Partial genomic sequencing of the major capsid protein from 1 sick turtle identified a ranavirus isolate similar to frog virus 3. Turtles that lacked clinical signs of disease had significantly higher body temperatures (23°C) than sick turtles (21°C) during the mass mortality, but sick turtles that survived and recovered eventually warmed (measured by temperature loggers). Finally, there was a significant negative effect of daily environmental temperature deviation from the 3 mo mean on survival, suggesting that rapid decreases in environmental temperature were correlated with mortality. Our results point to a potential role for environmental temperature variation and body temperature in disease progression and mortality risk of eastern box turtles affected by upper respiratory disease. Given our findings, it is possible that colder or more variable environmental temperatures and an inability to effectively thermoregulate are associated with poorer disease outcomes in eastern box turtles.
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Affiliation(s)
- Mickey Agha
- Department of Wildlife, Fish, and Conservation Biology, University of California, One Shields Avenue, Davis, CA 95616, USA
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79
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Neul A, Schrödl W, Marschang RE, Bjick T, Truyen U, von Buttlar H, Pees M. Immunologic responses in corn snakes (Pantherophis guttatus) after experimentally induced infection with ferlaviruses. Am J Vet Res 2017; 78:482-494. [DOI: 10.2460/ajvr.78.4.482] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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80
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Campbell LJ, Head ML, Wilfert L, Griffiths AGF. An ecological role for assortative mating under infection? CONSERV GENET 2017; 18:983-994. [PMID: 32009857 PMCID: PMC6961493 DOI: 10.1007/s10592-017-0951-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2016] [Accepted: 03/01/2017] [Indexed: 11/29/2022]
Abstract
Wildlife diseases are emerging at a higher rate than ever before meaning that understanding their potential impacts is essential, especially for those species and populations that may already be of conservation concern. The link between population genetic structure and the resistance of populations to disease is well understood: high genetic diversity allows populations to better cope with environmental changes, including the outbreak of novel diseases. Perhaps following this common wisdom, numerous empirical and theoretical studies have investigated the link between disease and disassortative mating patterns, which can increase genetic diversity. Few however have looked at the possible link between disease and the establishment of assortative mating patterns. Given that assortative mating can reduce genetic variation within a population thus reducing the adaptive potential and long-term viability of populations, we suggest that this link deserves greater attention, particularly in those species already threatened by a lack of genetic diversity. Here, we summarise the potential broad scale genetic implications of assortative mating patterns and outline how infection by pathogens or parasites might bring them about. We include a review of the empirical literature pertaining to disease-induced assortative mating. We also suggest future directions and methodological improvements that could advance our understanding of how the link between disease and mating patterns influences genetic variation and long-term population viability.
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Affiliation(s)
- L. J. Campbell
- Environment and Sustainability Institute, University of Exeter, Penryn Campus, Penryn, Cornwall TR10 9FE UK
- Institute of Zoology, Zoological Society of London, Regent’s Park, London, NW1 4RY UK
| | - M. L. Head
- Division of Evolution, Ecology and Genetics, Research School of Biology, Australian National University, Canberra, ACT Australia
| | - L. Wilfert
- Centre for Ecology and Conservation, University of Exeter, Penryn Campus, Penryn, Cornwall TR10 9FE UK
| | - A. G. F. Griffiths
- Environment and Sustainability Institute, University of Exeter, Penryn Campus, Penryn, Cornwall TR10 9FE UK
- FoAM Kernow, Studio E, Jubilee Warehouse, Commercial Road, Penryn, Cornwall TR10 8FG UK
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81
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Christman J, Devau M, Wilson-Robles H, Hoppes S, Rech R, Russell KE, Heatley JJ. Oncology of Reptiles: Diseases, Diagnosis, and Treatment. Vet Clin North Am Exot Anim Pract 2017; 20:87-110. [PMID: 27890294 DOI: 10.1016/j.cvex.2016.07.003] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Based on necropsy review, neoplasia in reptiles has a comparable frequency to that of mammals and birds. Reptile neoplasia is now more frequently diagnosed in clinical practice based on increased use of advanced diagnostic techniques and improvements in reptilian husbandry allowing greater longevity of these species. This article reviews the current literature on neoplasia in reptiles, and focuses on advanced diagnostics and therapeutic options for reptilian patientssuffering neoplastic disease. Although most applied clinical reptile oncology is translated from dog and cat oncology, considerations specific to reptilian patients commonly encountered in clinical practice (turtles, tortoises, snakes, and lizards) are presented.
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Affiliation(s)
- Jane Christman
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, 408 Raymond Stotzer Parkway, College Station, TX 77843-4474, USA
| | - Michael Devau
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, 408 Raymond Stotzer Parkway, College Station, TX 77843-4474, USA
| | - Heather Wilson-Robles
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, 408 Raymond Stotzer Parkway, College Station, TX 77843-4474, USA
| | - Sharman Hoppes
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, 408 Raymond Stotzer Parkway, College Station, TX 77843-4474, USA
| | - Raquel Rech
- Department of Veterinary Pathobiology, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, 400 Raymond Stotzer Parkway, College Station, TX 77843-4467, USA
| | - Karen E Russell
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, 408 Raymond Stotzer Parkway, College Station, TX 77843-4474, USA
| | - J Jill Heatley
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, 408 Raymond Stotzer Parkway, College Station, TX 77843-4474, USA.
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82
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Schilliger L, Mentré V, Marschang RE, Nicolier A, Richter B. Triple infection with agamid adenovirus 1, Encephaliton cuniculi-like microsporidium and enteric coccidia in a bearded dragon (Pogona vitticeps). TIERARZTLICHE PRAXIS. AUSGABE K, KLEINTIERE/HEIMTIERE 2016; 44:355-358. [PMID: 27385082 DOI: 10.15654/tpk-150790] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2015] [Accepted: 02/03/2016] [Indexed: 06/06/2023]
Abstract
A 2-month-old juvenile central bearded dragon was presented for anorexia and cachexia. Another specimen from the same cage had died suddenly 2 weeks prior. Fecal analysis revealed a high quantity of Isospora amphiboluri and a few pinworm eggs. Other examinations were not performed and the animal died a few days later despite supportive care. A third individual from the same cage presented with anorexia and a distended cœlom and was euthanized. In this third dragon, histological examination revealed intestinal coccidiosis, basophilic intranuclear inclusions compatible with adenovirus infection, acute hepatic necrosis with intrahepatocytic and intraenteritic organisms typical of microsporidia and renal gout. A PCR confirmed the diagnosis of adenovirosis. Sequencing showed that the PCR product was 100% identical to the corresponding portion of the agamid adenovirus 1 genome. A PCR for the detection of Encephalitozoon (E.) cuniculi was positive. Partial sequencing revealed 100% identity to an E. cuniculi-like organism previously found in bearded dragons. In cases where environmental factors such as poor hygiene or stress can be excluded, the presence of opportunistic pathogens in high numbers can be due to a systemic (viral) infection with temporary immunosuppression.
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Affiliation(s)
- Lionel Schilliger
- Dr. Lionel Schilliger, Clinique vétérinaire du village d'Auteuil, 75016 Paris, Frankreich, E-Mail:
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83
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Dahlin CR, Hughes DF, Meshaka WE, Coleman C, Henning JD. Wild snakes harbor West Nile virus. One Health 2016; 2:136-138. [PMID: 28616487 PMCID: PMC5441359 DOI: 10.1016/j.onehlt.2016.09.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2016] [Revised: 09/20/2016] [Accepted: 09/21/2016] [Indexed: 11/21/2022] Open
Abstract
West Nile virus (WNV) has a complex eco-epidemiology with birds acting as reservoirs and hosts for the virus. Less well understood is the role of reptiles, especially in wild populations. The goal of our study was to determine whether a wild population of snakes in Pennsylvania harbored WNV. Six species of snakes were orally sampled in the summer of 2013 and were tested for the presence of WNV viral RNA using RT-PCR. Two Eastern Garter Snakes, Thamnophis sirtalis sirtalis tested positive for viral RNA (2/123, 1.62%). These results indicate a possible role for snakes in the complex transmission cycle of WNV.
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Affiliation(s)
- C R Dahlin
- Department of Biology, University of Pittsburgh at Johnstown, Johnstown, PA 15904, United States
| | - D F Hughes
- Department of Biological Sciences, University of Texas at El Paso, 500 West University Avenue, El Paso, TX 79968, United States
| | - W E Meshaka
- Section of Zoology and Botany, State Museum of Pennsylvania, 300 North Street, Harrisburg, PA 17120, United States
| | - C Coleman
- Department of Biology, University of Pittsburgh at Johnstown, Johnstown, PA 15904, United States
| | - J D Henning
- Department of Biology, University of Pittsburgh at Johnstown, Johnstown, PA 15904, United States
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84
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Yuan Y, Wang Y, Liu Q, Zhu F, Hong Y. Singapore grouper iridovirus protein VP088 is essential for viral infectivity. Sci Rep 2016; 6:31170. [PMID: 27498856 PMCID: PMC4976331 DOI: 10.1038/srep31170] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2016] [Accepted: 07/13/2016] [Indexed: 12/14/2022] Open
Abstract
Viral infection is a great challenge in healthcare and agriculture. The Singapore grouper iridovirus (SGIV) is highly infectious to numerous marine fishes and increasingly threatens mariculture and wildlife conservation. SGIV intervention is not available because little is known about key players and their precise roles in SGVI infection. Here we report the precise role of VP088 as a key player in SGIV infection. VP088 was verified as an envelope protein encoded by late gene orf088. We show that SGIV could be neutralized with an antibody against VP088. Depletion or deletion of VP088 significantly suppresses SGIV infection without altering viral gene expression and host responses. By precisely quantifying the genome copy numbers of host cells and virions, we reveal that VP088 deletion dramatically reduces SGIV infectivity through inhibiting virus entry without altering viral pathogenicity, genome stability and replication and progeny virus release. These results pinpoint that VP088 is a key player in SGIV entry and represents an ideal target for SGIV intervention.
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Affiliation(s)
- Yongming Yuan
- Department of Biological Sciences, National University of Singapore, Science Drive 4, Singapore 117543, Singapore
| | - Yunzhi Wang
- Department of Biological Sciences, National University of Singapore, Science Drive 4, Singapore 117543, Singapore
| | - Qizhi Liu
- Department of Biological Sciences, National University of Singapore, Science Drive 4, Singapore 117543, Singapore
| | - Feng Zhu
- Department of Biological Sciences, National University of Singapore, Science Drive 4, Singapore 117543, Singapore
| | - Yunhan Hong
- Department of Biological Sciences, National University of Singapore, Science Drive 4, Singapore 117543, Singapore
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85
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Garcia-Morante B, Pénzes JJ, Costa T, Martorell J, Martínez J. Hyperplastic stomatitis and esophagitis in a tortoise (Testudo graeca) associated with an adenovirus infection. J Vet Diagn Invest 2016; 28:579-83. [PMID: 27486139 DOI: 10.1177/1040638716659903] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
A 2-year-old female, spur-thighed tortoise (Testudo graeca) was presented with poor body condition (1/5) and weakness. Fecal analysis revealed large numbers of oxyurid-like eggs, and radiographs were compatible with gastrointestinal obstruction. Despite supportive medical treatment, the animal died. At gross examination, an intestinal obstruction was confirmed. Histopathology revealed severe hyperplastic esophagitis and stomatitis with marked epithelial cytomegaly and enormous basophilic intranuclear inclusion bodies. Electron microscopy examination revealed a large number of 60-80 nm, nonenveloped, icosahedral virions arranged in crystalline arrays within nuclear inclusions of esophageal epithelial cells, morphologically compatible with adenovirus-like particles. PCR for virus identification was performed with DNA extracted from formalin-fixed, paraffin-embedded tissues. A nested, consensus pan-adenovirus PCR and sequencing analysis showed a novel adenovirus. According to phylogenetic calculations, it clustered to genus Atadenovirus in contrast with all other chelonian adenoviruses described to date. The present report details the pathologic findings associated with an adenovirus infection restricted to the upper digestive tract.
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Affiliation(s)
- Beatriz Garcia-Morante
- Servei de Diagnòstic de Patologia Veterinària, Departament de Sanitat i Anatomia Animals, Universitat Autònoma de Barcelona, Bellaterra, Spain (Garcia-Morante, Martínez)Hospital Clínic Veterinari, Universitat Autònoma de Barcelona, Bellaterra, Spain (Martorell)Centre de Recerca en Sanitat Animal (CReSA, IRTA-UAB), Campus de la Universitat Autònoma de Barcelona, Bellaterra, Spain (Garcia-Morante, Costa, Martínez)Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary (Pénzes)
| | - Judit J Pénzes
- Servei de Diagnòstic de Patologia Veterinària, Departament de Sanitat i Anatomia Animals, Universitat Autònoma de Barcelona, Bellaterra, Spain (Garcia-Morante, Martínez)Hospital Clínic Veterinari, Universitat Autònoma de Barcelona, Bellaterra, Spain (Martorell)Centre de Recerca en Sanitat Animal (CReSA, IRTA-UAB), Campus de la Universitat Autònoma de Barcelona, Bellaterra, Spain (Garcia-Morante, Costa, Martínez)Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary (Pénzes)
| | - Taiana Costa
- Servei de Diagnòstic de Patologia Veterinària, Departament de Sanitat i Anatomia Animals, Universitat Autònoma de Barcelona, Bellaterra, Spain (Garcia-Morante, Martínez)Hospital Clínic Veterinari, Universitat Autònoma de Barcelona, Bellaterra, Spain (Martorell)Centre de Recerca en Sanitat Animal (CReSA, IRTA-UAB), Campus de la Universitat Autònoma de Barcelona, Bellaterra, Spain (Garcia-Morante, Costa, Martínez)Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary (Pénzes)
| | - Jaime Martorell
- Servei de Diagnòstic de Patologia Veterinària, Departament de Sanitat i Anatomia Animals, Universitat Autònoma de Barcelona, Bellaterra, Spain (Garcia-Morante, Martínez)Hospital Clínic Veterinari, Universitat Autònoma de Barcelona, Bellaterra, Spain (Martorell)Centre de Recerca en Sanitat Animal (CReSA, IRTA-UAB), Campus de la Universitat Autònoma de Barcelona, Bellaterra, Spain (Garcia-Morante, Costa, Martínez)Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary (Pénzes)
| | - Jorge Martínez
- Servei de Diagnòstic de Patologia Veterinària, Departament de Sanitat i Anatomia Animals, Universitat Autònoma de Barcelona, Bellaterra, Spain (Garcia-Morante, Martínez)Hospital Clínic Veterinari, Universitat Autònoma de Barcelona, Bellaterra, Spain (Martorell)Centre de Recerca en Sanitat Animal (CReSA, IRTA-UAB), Campus de la Universitat Autònoma de Barcelona, Bellaterra, Spain (Garcia-Morante, Costa, Martínez)Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary (Pénzes)
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86
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LOZA-RUBIO E, ROJAS-ANAYA E, LÓPEZ-RAMÍREZ RDELC, SAIZ JC, ESCRIBANO-ROMERO E. Prevalence of neutralizing antibodies against West Nile virus (WNV) in monkeys (Ateles geoffroyi and Alouatta pigra) and crocodiles (Crocodylus acutus and C. acutus-C. moreletti hybrids) in Mexico. Epidemiol Infect 2016; 144:2371-3. [PMID: 27097655 PMCID: PMC9150527 DOI: 10.1017/s0950268816000790] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2015] [Revised: 04/04/2016] [Accepted: 04/04/2016] [Indexed: 11/07/2022] Open
Abstract
West Nile virus (WNV) is a mosquito-borne neurotropic viral pathogen maintained in an enzootic cycle between mosquitoes (vectors) and birds (natural hosts) with equids, humans, and other vertebrates acting as dead-end hosts. WNV activity in Mexico has been reported in several domestic and wild fauna and in humans, and the virus has been isolated from birds, mosquitoes, and humans. However, no serological studies have been conducted in monkeys, and only two in a limited number of crocodiles (Crocodylus moreletii). Here we present data on the prevalence of neutralizing antibodies against WNV in 53 healthy wild monkeys (49 Ateles geoffroyi and four Alouatta pigra), and 80 semi-captive healthy crocodiles (60 C. acutus and 20 C. acutus-C. moreletti hybrids) sampled during 2012. None of the monkey sera neutralized WNV, whereas 55% of the crocodile sera presented neutralizing antibodies against WNV. These results can contribute to the design of surveillance programmes in Mexico.
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Affiliation(s)
- E. LOZA-RUBIO
- Instituto Nacional de Investigaciones Agrícolas, Forestales y Pecuarias (CENID-Microbiología), Carretera México-Toluca Km 15·5, Colonia Palo Alto, CP 05110, México DF, Mexico
| | - E. ROJAS-ANAYA
- Instituto Nacional de Investigaciones Agrícolas, Forestales y Pecuarias (CENID-Microbiología), Carretera México-Toluca Km 15·5, Colonia Palo Alto, CP 05110, México DF, Mexico
| | - R. DEL C. LÓPEZ-RAMÍREZ
- Instituto Nacional de Investigaciones Agrícolas, Forestales y Pecuarias (CENID-Microbiología), Carretera México-Toluca Km 15·5, Colonia Palo Alto, CP 05110, México DF, Mexico
| | - J. C. SAIZ
- Department of Biotechnology, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Madrid, Spain
| | - E. ESCRIBANO-ROMERO
- Department of Biotechnology, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Madrid, Spain
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87
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Szirovicza L, López P, Kopena R, Benkő M, Martín J, Pénzes JJ. Random Sampling of Squamate Reptiles in Spanish Natural Reserves Reveals the Presence of Novel Adenoviruses in Lacertids (Family Lacertidae) and Worm Lizards (Amphisbaenia). PLoS One 2016; 11:e0159016. [PMID: 27399970 PMCID: PMC4939969 DOI: 10.1371/journal.pone.0159016] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2016] [Accepted: 06/24/2016] [Indexed: 12/15/2022] Open
Abstract
Here, we report the results of a large-scale PCR survey on the prevalence and diversity of adenoviruses (AdVs) in samples collected randomly from free-living reptiles. On the territories of the Guadarrama Mountains National Park in Central Spain and of the Chafarinas Islands in North Africa, cloacal swabs were taken from 318 specimens of eight native species representing five squamate reptilian families. The healthy-looking animals had been captured temporarily for physiological and ethological examinations, after which they were released. We found 22 AdV-positive samples in representatives of three species, all from Central Spain. Sequence analysis of the PCR products revealed the existence of three hitherto unknown AdVs in 11 Carpetane rock lizards (Iberolacerta cyreni), nine Iberian worm lizards (Blanus cinereus), and two Iberian green lizards (Lacerta schreiberi), respectively. Phylogeny inference showed every novel putative virus to be a member of the genus Atadenovirus. This is the very first description of the occurrence of AdVs in amphisbaenian and lacertid hosts. Unlike all squamate atadenoviruses examined previously, two of the novel putative AdVs had A+T rich DNA, a feature generally deemed to mirror previous host switch events. Our results shed new light on the diversity and evolution of atadenoviruses.
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Affiliation(s)
- Leonóra Szirovicza
- Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, 21 Hungária krt., Budapest, H-1143, Hungary
| | - Pilar López
- Departamento de Ecología Evolutiva, Museo Nacional de Ciencias Naturales, C.S.I.C, José Gutiérrez Abascal 2, E-28006, Madrid, Spain
| | - Renáta Kopena
- Departamento de Ecología Evolutiva, Museo Nacional de Ciencias Naturales, C.S.I.C, José Gutiérrez Abascal 2, E-28006, Madrid, Spain
| | - Mária Benkő
- Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, 21 Hungária krt., Budapest, H-1143, Hungary
| | - José Martín
- Departamento de Ecología Evolutiva, Museo Nacional de Ciencias Naturales, C.S.I.C, José Gutiérrez Abascal 2, E-28006, Madrid, Spain
| | - Judit J. Pénzes
- Institute for Veterinary Medical Research, Centre for Agricultural Research, Hungarian Academy of Sciences, 21 Hungária krt., Budapest, H-1143, Hungary
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88
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Kolesnik E, Mittenzwei F, Marschang RE. Detection of testudinid herpesvirus type 4 in a leopard tortoise (Stigmochelys pardalis). TIERAERZTLICHE PRAXIS AUSGABE KLEINTIERE HEIMTIERE 2016; 44:283-6. [PMID: 27301060 DOI: 10.15654/tpk-150843] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2015] [Accepted: 01/19/2016] [Indexed: 11/13/2022]
Abstract
Several animals from a mixed species collection of tortoises in Germany died unexpectedly. Some of the affected leopard tortoises (Stigmochelys pardalis) from this group showed respiratory signs. Samples were collected from one of the ill tortoises, and a Mycoplasma spp. and a herpesvirus were detected by PCR. Sequencing of a portion of the DNA polymerase gene of the herpesvirus showed 99% identity with testudinid herpesvirus 4, previously described only once in a bowsprit tortoise (Chersina angulata) in the United States.
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Affiliation(s)
| | | | - Rachel E Marschang
- Rachel E. Marschang, Laboklin GmbH+Co KG, Steubenstraße 4, 97688 Bad Kissingen, E-Mail:
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89
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90
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Kugler R, Marschang RE, Ihász K, Lengyel G, Jakab F, Bányai K, Farkas SL. Whole genome characterization of a chelonian orthoreovirus strain identifies significant genetic diversity and may classify reptile orthoreoviruses into distinct species. Virus Res 2016; 215:94-8. [DOI: 10.1016/j.virusres.2016.02.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2015] [Revised: 02/12/2016] [Accepted: 02/12/2016] [Indexed: 10/22/2022]
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91
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Marschang RE, Ihász K, Kugler R, Lengyel G, Fehér E, Marton S, Bányai K, Aqrawi T, Farkas SL. Development of a consensus reverse transcription PCR assay for the specific detection of tortoise picornaviruses. J Vet Diagn Invest 2016; 28:309-14. [DOI: 10.1177/1040638716628584] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023] Open
Abstract
Picornaviruses (PVs) of different terrestrial tortoise species, previously designated as Virus “X,” have been frequently detected from various tissues by virus isolation in Terrapene heart cell culture as the preferred laboratory method for diagnosis. Here, we describe the development of 2 diagnostic reverse transcription (RT)-PCR–based assays for the identification and characterization of tortoise PVs belonging to the tentative genus Topivirus. To test the novel diagnostic systems, PVs were isolated from swab and tissue samples collected in Germany, Italy, and Hungary between 2000 and 2013. All 25 tested isolates gave positive results with both novel consensus primer sets. Sequencing of the amplified products confirmed that all studied viruses were members of the new proposed genus Topivirus. Phylogenetic analyses clearly distinguished 2 lineages within the genus. Based on sequence analysis, no association was observed between the geographic distribution and genetic relatedness. Furthermore, no strict host specificity was indicated. The PCR-based diagnosis may provide a time-saving and sensitive method to detect tortoise PVs, and evaluation of PV presence in these animals may help control virus spread.
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Affiliation(s)
- Rachel E. Marschang
- LABOKLIN GmbH & Co. KG, Laboratory for Clinical Diagnostics, Bad Kissingen, Germany (Marschang)
- Centre for Agricultural Research, Institute for Veterinary Medical Research, Hungarian Academy of Sciences, Budapest, Hungary (Ihász, Kugler, Fehér, Marton, Bányai, Farkas)
- Medical Centre of Hungarian Defense Forces, Force Health Laboratory Institute, Budapest, Hungary (Lengyel)
- FG für Umweltund Tierhygiene, University of Hohenheim, Stuttgart, Germany (Aqrawi)
| | - Katalin Ihász
- LABOKLIN GmbH & Co. KG, Laboratory for Clinical Diagnostics, Bad Kissingen, Germany (Marschang)
- Centre for Agricultural Research, Institute for Veterinary Medical Research, Hungarian Academy of Sciences, Budapest, Hungary (Ihász, Kugler, Fehér, Marton, Bányai, Farkas)
- Medical Centre of Hungarian Defense Forces, Force Health Laboratory Institute, Budapest, Hungary (Lengyel)
- FG für Umweltund Tierhygiene, University of Hohenheim, Stuttgart, Germany (Aqrawi)
| | - Renáta Kugler
- LABOKLIN GmbH & Co. KG, Laboratory for Clinical Diagnostics, Bad Kissingen, Germany (Marschang)
- Centre for Agricultural Research, Institute for Veterinary Medical Research, Hungarian Academy of Sciences, Budapest, Hungary (Ihász, Kugler, Fehér, Marton, Bányai, Farkas)
- Medical Centre of Hungarian Defense Forces, Force Health Laboratory Institute, Budapest, Hungary (Lengyel)
- FG für Umweltund Tierhygiene, University of Hohenheim, Stuttgart, Germany (Aqrawi)
| | - György Lengyel
- LABOKLIN GmbH & Co. KG, Laboratory for Clinical Diagnostics, Bad Kissingen, Germany (Marschang)
- Centre for Agricultural Research, Institute for Veterinary Medical Research, Hungarian Academy of Sciences, Budapest, Hungary (Ihász, Kugler, Fehér, Marton, Bányai, Farkas)
- Medical Centre of Hungarian Defense Forces, Force Health Laboratory Institute, Budapest, Hungary (Lengyel)
- FG für Umweltund Tierhygiene, University of Hohenheim, Stuttgart, Germany (Aqrawi)
| | - Enikő Fehér
- LABOKLIN GmbH & Co. KG, Laboratory for Clinical Diagnostics, Bad Kissingen, Germany (Marschang)
- Centre for Agricultural Research, Institute for Veterinary Medical Research, Hungarian Academy of Sciences, Budapest, Hungary (Ihász, Kugler, Fehér, Marton, Bányai, Farkas)
- Medical Centre of Hungarian Defense Forces, Force Health Laboratory Institute, Budapest, Hungary (Lengyel)
- FG für Umweltund Tierhygiene, University of Hohenheim, Stuttgart, Germany (Aqrawi)
| | - Szilvia Marton
- LABOKLIN GmbH & Co. KG, Laboratory for Clinical Diagnostics, Bad Kissingen, Germany (Marschang)
- Centre for Agricultural Research, Institute for Veterinary Medical Research, Hungarian Academy of Sciences, Budapest, Hungary (Ihász, Kugler, Fehér, Marton, Bányai, Farkas)
- Medical Centre of Hungarian Defense Forces, Force Health Laboratory Institute, Budapest, Hungary (Lengyel)
- FG für Umweltund Tierhygiene, University of Hohenheim, Stuttgart, Germany (Aqrawi)
| | - Krisztián Bányai
- LABOKLIN GmbH & Co. KG, Laboratory for Clinical Diagnostics, Bad Kissingen, Germany (Marschang)
- Centre for Agricultural Research, Institute for Veterinary Medical Research, Hungarian Academy of Sciences, Budapest, Hungary (Ihász, Kugler, Fehér, Marton, Bányai, Farkas)
- Medical Centre of Hungarian Defense Forces, Force Health Laboratory Institute, Budapest, Hungary (Lengyel)
- FG für Umweltund Tierhygiene, University of Hohenheim, Stuttgart, Germany (Aqrawi)
| | - Tara Aqrawi
- LABOKLIN GmbH & Co. KG, Laboratory for Clinical Diagnostics, Bad Kissingen, Germany (Marschang)
- Centre for Agricultural Research, Institute for Veterinary Medical Research, Hungarian Academy of Sciences, Budapest, Hungary (Ihász, Kugler, Fehér, Marton, Bányai, Farkas)
- Medical Centre of Hungarian Defense Forces, Force Health Laboratory Institute, Budapest, Hungary (Lengyel)
- FG für Umweltund Tierhygiene, University of Hohenheim, Stuttgart, Germany (Aqrawi)
| | - Szilvia L. Farkas
- LABOKLIN GmbH & Co. KG, Laboratory for Clinical Diagnostics, Bad Kissingen, Germany (Marschang)
- Centre for Agricultural Research, Institute for Veterinary Medical Research, Hungarian Academy of Sciences, Budapest, Hungary (Ihász, Kugler, Fehér, Marton, Bányai, Farkas)
- Medical Centre of Hungarian Defense Forces, Force Health Laboratory Institute, Budapest, Hungary (Lengyel)
- FG für Umweltund Tierhygiene, University of Hohenheim, Stuttgart, Germany (Aqrawi)
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92
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RANAVIRUS EPIZOOTIC IN CAPTIVE EASTERN BOX TURTLES (TERRAPENE CAROLINA CAROLINA) WITH CONCURRENT HERPESVIRUS AND MYCOPLASMA INFECTION: MANAGEMENT AND MONITORING. J Zoo Wildl Med 2016; 47:256-70. [DOI: 10.1638/2015-0048.1] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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93
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94
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EXPERIMENTAL CHALLENGE STUDY OF FV3-LIKE RANAVIRUS INFECTION IN PREVIOUSLY FV3-LIKE RANAVIRUS INFECTED EASTERN BOX TURTLES (TERRAPENE CAROLINA CAROLINA) TO ASSESS INFECTION AND SURVIVAL. J Zoo Wildl Med 2015; 46:732-46. [DOI: 10.1638/2015-0022.1] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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95
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Molecular identification of three novel herpesviruses found in Australian farmed saltwater crocodiles (Crocodylus porosus) and Australian captive freshwater crocodiles (Crocodylus johnstoni). Vet Microbiol 2015; 181:183-9. [DOI: 10.1016/j.vetmic.2015.09.013] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2015] [Revised: 09/04/2015] [Accepted: 09/16/2015] [Indexed: 11/19/2022]
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96
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Gilbert C, Meik JM, Dashevsky D, Card DC, Castoe TA, Schaack S. Endogenous hepadnaviruses, bornaviruses and circoviruses in snakes. Proc Biol Sci 2015; 281:20141122. [PMID: 25080342 DOI: 10.1098/rspb.2014.1122] [Citation(s) in RCA: 66] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
We report the discovery of endogenous viral elements (EVEs) from Hepadnaviridae, Bornaviridae and Circoviridae in the speckled rattlesnake, Crotalus mitchellii, the first viperid snake for which a draft whole genome sequence assembly is available. Analysis of the draft assembly reveals genome fragments from the three virus families were inserted into the genome of this snake over the past 50 Myr. Cross-species PCR screening of orthologous loci and computational scanning of the python and king cobra genomes reveals that circoviruses integrated most recently (within the last approx. 10 Myr), whereas bornaviruses and hepadnaviruses integrated at least approximately 13 and approximately 50 Ma, respectively. This is, to our knowledge, the first report of circo-, borna- and hepadnaviruses in snakes and the first characterization of non-retroviral EVEs in non-avian reptiles. Our study provides a window into the historical dynamics of viruses in these host lineages and shows that their evolution involved multiple host-switches between mammals and reptiles.
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Affiliation(s)
- C Gilbert
- Université de Poitiers, UMR CNRS 7267, Ecologie et Biologie des Interactions, Equipe Ecologie Evolution Symbiose, Poitiers, France
| | - J M Meik
- Department of Biological Sciences, Tarleton State University, Stephenville, TX, USA
| | - D Dashevsky
- Department of Biology, Reed College, Portland, OR, USA
| | - D C Card
- Department of Biology, The University of Texas at Arlington, Arlington, TX, USA
| | - T A Castoe
- Department of Biology, The University of Texas at Arlington, Arlington, TX, USA
| | - S Schaack
- Department of Biology, Reed College, Portland, OR, USA Biosciences Eastern and Central Africa, International Livestock Research Institute, Nairobi, Kenya Centre for Bioinformatics and Biotechnology, University of Nairobi, Nairobi, Kenya
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97
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Cowan ML, Raidal SR, Peters A. Herpesvirus in a captive Australian Krefft's river turtle (Emydura macquarii krefftii). Aust Vet J 2015; 93:46-9. [PMID: 25622710 DOI: 10.1111/avj.12290] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/26/2014] [Indexed: 11/29/2022]
Abstract
CASE REPORT A mature, captive Krefft's river turtle (Emydura macquarii krefftii) was presented with severe proliferative and ulcerative lesions of the skin and shell. The areas were biopsied and histopathological examination demonstrated orthokeratotic hyperkeratosis with keratinocytes containing eosinophilic intranuclear inclusions. Molecular diagnostics confirmed the presence of a herpesvirus in the affected tissues. CONCLUSION This is the first recorded case of herpesvirus infection in an Australian freshwater turtle species.
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Affiliation(s)
- M L Cowan
- Brisbane Bird and Exotics Veterinary Service, Cnr Kessels Road and Springfield Street, Macgregor, Queensland, 4109, Australia.
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98
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Ariel E, Wirth W, Burgess G, Scott J, Owens L. Pathogenicity in six Australian reptile species following experimental inoculation with Bohle iridovirus. DISEASES OF AQUATIC ORGANISMS 2015; 115:203-212. [PMID: 26290505 DOI: 10.3354/dao02889] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Ranaviruses are able to infect multiple species of fish, amphibian and reptile, and some strains are capable of interclass transmission. These numerous potential carriers and reservoir species compound efforts to control and contain infections in cultured and wild populations, and a comprehensive knowledge of susceptible species and life stage is necessary to inform such processes. Here we report on the challenge of 6 water-associated reptiles with Bohle iridovirus (BIV) to investigate its potential pathogenicity in common native reptiles of the aquatic and riparian fauna of northern Queensland, Australia. Adult tortoises Elseya latisternum and Emydura krefftii, snakes Boiga irregularis, Dendrelaphis punctulatus and Amphiesma mairii, and yearling crocodiles Crocodylus johnstoni were exposed via intracoelomic inoculation or co-habitation with infected con-specifics, but none were adversely affected by the challenge conditions applied here. Bohle iridovirus was found to be extremely virulent in hatchling tortoises E. latisternum and E. krefftii via intracoelomic challenge, as demonstrated by distinct lesions in multiple organs associated with specific immunohistochemistry staining and a lethal outcome (10/17) of the challenge. Virus was re-isolated from 2/5 E. latisternum, 4/12 E. krefftii and 1/3 brown tree snakes B. irregularis. Focal necrosis, haemorrhage and infiltration of granulocytes were frequently observed histologically in the pancreas, liver and sub-mucosa of the intestine of challenged tortoise hatchlings. Immunohistochemistry demonstrated the presence of ranavirus antigens in the necrotic lesions and in individual cells of the vascular endothelium, the connective tissue and in granulocytes associated with necrosis or present along serosal surfaces. The outcome of this study confirms hatchling tortoises are susceptible to BIV, thereby adding Australian reptiles to the host range of ranaviruses. Additionally, given that BIV was originally isolated from an amphibian, our study provides additional evidence that interclass transmission of ranavirus may occur in the wild.
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Affiliation(s)
- E Ariel
- College of Public Health, Medical and Veterinary Sciences, James Cook University, Townsville, 4811 QLD, Australia
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99
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Kimble SJA, Karna AK, Johnson AJ, Hoverman JT, Williams RN. Mosquitoes as a Potential Vector of Ranavirus Transmission in Terrestrial Turtles. ECOHEALTH 2015; 12:334-338. [PMID: 25212726 DOI: 10.1007/s10393-014-0974-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2014] [Revised: 08/19/2014] [Accepted: 08/22/2014] [Indexed: 06/03/2023]
Abstract
Ranaviruses are significant pathogens of amphibians, reptiles, and fishes, contributing to mass mortality events worldwide. Despite an increasing focus on ranavirus ecology, our understanding of ranavirus transmission, especially among reptilian hosts, remains limited. For example, experimental evidence for oral transmission of the virus in chelonians is mixed. Consequently, vector-borne transmission has been hypothesized in terrestrial turtle species. To test this hypothesis, mosquitoes captured during a 2012/2013 ranavirus outbreak in box turtles from southwestern Indiana were pooled by genus and tested for ranavirus DNA using qPCR. Two of 30 pools tested positive for ranavirus. Additionally, an individual Aedes sp. mosquito observed engorging on a box turtle also tested positive for ranavirus. Although our approach does not rule out the possibility that the sequenced ranavirus was simply from virus in bloodmeal, it does suggests that mosquitoes may be involved in virus transmission as a mechanical or biological vector among ectothermic vertebrates. While additional studies are needed to elucidate the exact role of mosquitoes in ranavirus ecology, our study suggests that a greater focus on vector-borne transmission may be necessary to fully understand ranaviral disease dynamics in herpetofauna.
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Affiliation(s)
- Steven J A Kimble
- Department of Forestry and Natural Resources, College of Agriculture, Purdue University, 715 West State Street, West Lafayette, IN, USA.
| | - Ajit K Karna
- Department of Comparative Pathobiology, College of Veterinary Medicine, Purdue University, 725 Harrison Street, West Lafayette, IN, USA
| | - April J Johnson
- Department of Comparative Pathobiology, College of Veterinary Medicine, Purdue University, 725 Harrison Street, West Lafayette, IN, USA
| | - Jason T Hoverman
- Department of Forestry and Natural Resources, College of Agriculture, Purdue University, 715 West State Street, West Lafayette, IN, USA
| | - Rod N Williams
- Department of Forestry and Natural Resources, College of Agriculture, Purdue University, 715 West State Street, West Lafayette, IN, USA
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100
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Fredholm DV, Coleman JK, Childress AL, Wellehan JFX. Development and validation of a novel hydrolysis probe real-time polymerase chain reaction for agamid adenovirus 1 in the central bearded dragon (Pogona vitticeps). J Vet Diagn Invest 2015; 27:249-53. [DOI: 10.1177/1040638715576564] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Agamid adenovirus 1 (AgAdv-1) is a significant cause of disease in bearded dragons ( Pogona sp.). Clinical manifestations of AgAdv-1 infection are variable and often nonspecific; the manifestations range from lethargy, weight loss, and inappetence, to severe enteritis, hepatitis, and sudden death. Currently, diagnosis of AgAdv-1 infection is achieved through a single published method: standard nested polymerase chain reaction (nPCR) and sequencing. Standard nPCR with sequencing provides reliable sensitivity, specificity, and validation of PCR products. However, this process is comparatively expensive, laborious, and slow. Probe hybridization, as used in a TaqMan assay, represents the best option for validating PCR products aside from the time-consuming process of sequencing. This study developed a real-time PCR (qPCR) assay using a TaqMan probe–based assay, targeting a highly conserved region of the AgAdv-1 genome. Standard curves were generated, detection results were compared with the gold standard conventional PCR and sequencing assay, and limits of detection were determined. Additionally, the qPCR assay was run on samples known to be positive for AgAdv-1 and samples known to be positive for other adenoviruses. Based on the results of these evaluations, this assay allows for a less expensive, rapid, quantitative detection of AgAdv-1 in bearded dragons.
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Affiliation(s)
- Daniel V. Fredholm
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine, University of Florida, Gainesville, FL
| | - James K. Coleman
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine, University of Florida, Gainesville, FL
| | - April L. Childress
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine, University of Florida, Gainesville, FL
| | - James F. X. Wellehan
- Department of Small Animal Clinical Sciences, College of Veterinary Medicine, University of Florida, Gainesville, FL
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