151
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Kumar V, Leroy C, Bryce DL. Halide ion recognition via chalcogen bonding in the solid state and in solution. Directionality and linearity. CrystEngComm 2018. [DOI: 10.1039/c8ce01365a] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Benzylic selenocyanates are versatile anion receptors which operate in solution and in the solid state via chalcogen bonding interactions.
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Affiliation(s)
- Vijith Kumar
- Department of Chemistry and Biomolecular Sciences & Centre for Catalysis Research and Innovation
- University of Ottawa
- Ottawa
- Canada
| | - César Leroy
- Department of Chemistry and Biomolecular Sciences & Centre for Catalysis Research and Innovation
- University of Ottawa
- Ottawa
- Canada
| | - David L. Bryce
- Department of Chemistry and Biomolecular Sciences & Centre for Catalysis Research and Innovation
- University of Ottawa
- Ottawa
- Canada
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152
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Malenov DP, Antonijević IS, Hall MB, Zarić SD. Stacking of cyclopentadienyl organometallic sandwich and half-sandwich compounds. Strong interactions of sandwiches at large offsets. CrystEngComm 2018. [DOI: 10.1039/c8ce00597d] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
73% of stacking of Cp sandwiches in the CSD is at large offsets, since these interactions are relatively strong. Much weaker stacking between Cp half-sandwiches is surprising 60% of all stacks, due to more simultaneous interactions.
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Affiliation(s)
| | - Ivana S. Antonijević
- Institute of Chemistry
- Technology and Metallurgy
- University of Belgrade
- 11000 Belgrade
- Serbia
| | | | - Snežana D. Zarić
- Faculty of Chemistry
- University of Belgrade
- 11000 Belgrade
- Serbia
- Department of Chemistry
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153
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Harada J, Yoneyama N, Yokokura S, Takahashi Y, Miura A, Kitamura N, Inabe T. Ferroelectricity and Piezoelectricity in Free-Standing Polycrystalline Films of Plastic Crystals. J Am Chem Soc 2017; 140:346-354. [PMID: 29224333 DOI: 10.1021/jacs.7b10539] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Plastic crystals represent a unique compound class that is often encountered in molecules with globular structures. The highly symmetric cubic crystal structure of plastic crystals endows these materials with multiaxial ferroelectricity that allows a three-dimensional realignment of the polarization axes of the crystals, which cannot be achieved using conventional molecular ferroelectric crystals with low crystal symmetry. In this work, we focused our attention on malleability as another characteristic feature of plastic crystals. We have synthesized the new plastic/ferroelectric ionic crystals tetramethylammonium tetrachloroferrate(III) and tetramethylammonium bromotrichloroferrate(III), and discovered that free-standing translucent films can be easily prepared by pressing powdered samples of these compounds. The thus obtained polycrystalline films exhibit ferroelectric polarization switching and a relatively large piezoelectric response at room temperature. The ready availability of functional films demonstrates the practical utility of such plastic/ferroelectric crystals, and considering the vast variety of possible constituent cations and anions, a wide range of applications should be expected for these unique and attractive functional materials.
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Affiliation(s)
- Jun Harada
- Department of Chemistry, Faculty of Science, and ‡Graduate School of Chemical Sciences and Engineering, Hokkaido University , Sapporo 060-0810, Japan
| | - Naho Yoneyama
- Department of Chemistry, Faculty of Science, and ‡Graduate School of Chemical Sciences and Engineering, Hokkaido University , Sapporo 060-0810, Japan
| | - Seiya Yokokura
- Department of Chemistry, Faculty of Science, and ‡Graduate School of Chemical Sciences and Engineering, Hokkaido University , Sapporo 060-0810, Japan
| | - Yukihiro Takahashi
- Department of Chemistry, Faculty of Science, and ‡Graduate School of Chemical Sciences and Engineering, Hokkaido University , Sapporo 060-0810, Japan
| | - Atsushi Miura
- Department of Chemistry, Faculty of Science, and ‡Graduate School of Chemical Sciences and Engineering, Hokkaido University , Sapporo 060-0810, Japan
| | - Noboru Kitamura
- Department of Chemistry, Faculty of Science, and ‡Graduate School of Chemical Sciences and Engineering, Hokkaido University , Sapporo 060-0810, Japan
| | - Tamotsu Inabe
- Department of Chemistry, Faculty of Science, and ‡Graduate School of Chemical Sciences and Engineering, Hokkaido University , Sapporo 060-0810, Japan
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154
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155
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156
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Matvienko AA, Maslennikov DV, Zakharov BA, Sidelnikov AA, Chizhik SA, Boldyreva EV. Structural aspects of displacive transformations: what can optical microscopy contribute? Dehydration of Sm 2(C 2O 4) 3·10H 2O as a case study. IUCRJ 2017; 4:588-597. [PMID: 28932405 PMCID: PMC5600022 DOI: 10.1107/s2052252517008624] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/24/2016] [Accepted: 06/09/2017] [Indexed: 06/07/2023]
Abstract
For martensitic transformations the macroscopic crystal strain is directly related to the corresponding structural rearrangement at the microscopic level. In situ optical microscopy observations of the interface migration and the change in crystal shape during a displacive single crystal to single crystal transformation can contribute significantly to understanding the mechanism of the process at the atomic scale. This is illustrated for the dehydration of samarium oxalate decahydrate in a study combining optical microscopy and single-crystal X-ray diffraction.
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Affiliation(s)
- Alexander A. Matvienko
- Institute of Solid State Chemistry and Mechanochemistry, Siberian Branch of the Russian Academy of Sciences, Kutateladze Street 18, Novosibirsk 630128, Russian Federation
- Novosibirsk State University, Pirogova Street 2, Novosibirsk 630090, Russian Federation
| | - Daniel V. Maslennikov
- Institute of Solid State Chemistry and Mechanochemistry, Siberian Branch of the Russian Academy of Sciences, Kutateladze Street 18, Novosibirsk 630128, Russian Federation
| | - Boris A. Zakharov
- Institute of Solid State Chemistry and Mechanochemistry, Siberian Branch of the Russian Academy of Sciences, Kutateladze Street 18, Novosibirsk 630128, Russian Federation
- Novosibirsk State University, Pirogova Street 2, Novosibirsk 630090, Russian Federation
| | - Anatoly A. Sidelnikov
- Institute of Solid State Chemistry and Mechanochemistry, Siberian Branch of the Russian Academy of Sciences, Kutateladze Street 18, Novosibirsk 630128, Russian Federation
| | - Stanislav A. Chizhik
- Institute of Solid State Chemistry and Mechanochemistry, Siberian Branch of the Russian Academy of Sciences, Kutateladze Street 18, Novosibirsk 630128, Russian Federation
- Novosibirsk State University, Pirogova Street 2, Novosibirsk 630090, Russian Federation
| | - Elena V. Boldyreva
- Institute of Solid State Chemistry and Mechanochemistry, Siberian Branch of the Russian Academy of Sciences, Kutateladze Street 18, Novosibirsk 630128, Russian Federation
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157
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Worthy A, Grosjean A, Pfrunder MC, Xu Y, Yan C, Edwards G, Clegg JK, McMurtrie JC. Atomic resolution of structural changes in elastic crystals of copper(II) acetylacetonate. Nat Chem 2017; 10:65-69. [PMID: 29256512 DOI: 10.1038/nchem.2848] [Citation(s) in RCA: 167] [Impact Index Per Article: 23.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2017] [Accepted: 07/10/2017] [Indexed: 12/25/2022]
Abstract
Single crystals are typically brittle, inelastic materials. Such mechanical responses limit their use in practical applications, particularly in flexible electronics and optical devices. Here we describe single crystals of a well-known coordination compound-copper(II) acetylacetonate-that are flexible enough to be reversibly tied into a knot. Mechanical measurements indicate that the crystals exhibit an elasticity similar to that of soft materials such as nylon, and thus display properties normally associated with both hard and soft matter. Using microfocused synchrotron radiation, we mapped the changes in crystal structure that occur on bending, and determined the mechanism that allows this flexibility with atomic precision. We show that, under strain, the molecules in the crystal reversibly rotate, and thus reorganize to allow the mechanical compression and expansion required for elasticity and still maintain the integrity of the crystal structure.
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Affiliation(s)
- Anna Worthy
- School of Chemistry, Physics and Mechanical Engineering, Faculty of Science and Engineering, Queensland University of Technology, GPO Box 2434, Brisbane, Queensland 4001, Australia
| | - Arnaud Grosjean
- School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
| | - Michael C Pfrunder
- School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
| | - Yanan Xu
- School of Chemistry, Physics and Mechanical Engineering, Faculty of Science and Engineering, Queensland University of Technology, GPO Box 2434, Brisbane, Queensland 4001, Australia
| | - Cheng Yan
- School of Chemistry, Physics and Mechanical Engineering, Faculty of Science and Engineering, Queensland University of Technology, GPO Box 2434, Brisbane, Queensland 4001, Australia
| | - Grant Edwards
- Australian Institute of Bioengineering and Nanotechnology, The University of Queensland, St Lucia, Queensland 4072, Australia
| | - Jack K Clegg
- School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland 4072, Australia
| | - John C McMurtrie
- School of Chemistry, Physics and Mechanical Engineering, Faculty of Science and Engineering, Queensland University of Technology, GPO Box 2434, Brisbane, Queensland 4001, Australia
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158
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Hayashi S, Asano A, Kamiya N, Yokomori Y, Maeda T, Koizumi T. Fluorescent organic single crystals with elastic bending flexibility: 1,4-bis(thien-2-yl)-2,3,5,6-tetrafluorobenzene derivatives. Sci Rep 2017; 7:9453. [PMID: 28842693 PMCID: PMC5573333 DOI: 10.1038/s41598-017-09848-0] [Citation(s) in RCA: 45] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2017] [Accepted: 07/31/2017] [Indexed: 12/03/2022] Open
Abstract
Organic single crystals with elastic bending flexibility are rare because they are generally brittle. We report here fluorescent organic single crystals based on thiophene-tetrafluorobenzene-thiophene derivatives, mainly 1,4-bis(thien-2-yl)-2,3,5,6-tetrafluorobenzene. Three derivatives were synthesized by Pd-catalyzed cross-coupling reactions (Stille or direct arylation pathways). The crystallization of the derivatives gave large (mm- or cm-scale) crystals. Two crystals of 1,4-bis(thien-2-yl)-2,3,5,6-tetrafluorobenzene, 1, and 1,4-bis(4-methylthien-2-yl)-2,3,5,6-tetrafluorobenzene, 3, bent under applied stress and quickly recovered its original shape upon relaxation. The other crystal of 1,4-bis(5-methylthien-2-yl)-2,3,5,6-tetrafluorobenzene, 2, showed brittle breakage under applied stress (normal behavior). Fibril lamella crystal structure based on criss-cross packed slip-stacked molecular wires and its structural integrity are important factors for the design and production of next generation crystal materials with elastic bending flexibility. Furthermore, mechanical bending-relaxation resulted in reversible change of the morphology and fluorescence (mechanofluorochromism). Such bendable crystals would lead to the next generation solid-state fluorescent and/or semiconducting materials.
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Affiliation(s)
- Shotaro Hayashi
- Department of Applied Chemistry, National Defence Academy, 1-10-20 Hashirimizu, Yokosuka, 239-8686, Japan.
| | - Atsushi Asano
- Department of Applied Chemistry, National Defence Academy, 1-10-20 Hashirimizu, Yokosuka, 239-8686, Japan
| | - Natsumi Kamiya
- Department of Applied Chemistry, National Defence Academy, 1-10-20 Hashirimizu, Yokosuka, 239-8686, Japan
| | - Yoshinobu Yokomori
- Department of Applied Chemistry, National Defence Academy, 1-10-20 Hashirimizu, Yokosuka, 239-8686, Japan
| | - Takuto Maeda
- Department of Applied Chemistry, National Defence Academy, 1-10-20 Hashirimizu, Yokosuka, 239-8686, Japan
| | - Toshio Koizumi
- Department of Applied Chemistry, National Defence Academy, 1-10-20 Hashirimizu, Yokosuka, 239-8686, Japan
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159
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160
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Thomas SP, Shi MW, Koutsantonis GA, Jayatilaka D, Edwards AJ, Spackman MA. The Elusive Structural Origin of Plastic Bending in Dimethyl Sulfone Crystals with Quasi‐isotropic Crystal Packing. Angew Chem Int Ed Engl 2017; 56:8468-8472. [DOI: 10.1002/anie.201701972] [Citation(s) in RCA: 88] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2017] [Revised: 03/28/2017] [Indexed: 11/05/2022]
Affiliation(s)
- Sajesh P. Thomas
- School of Molecular Sciences The University of Western Australia Perth 6009 Australia
| | - Ming W. Shi
- School of Molecular Sciences The University of Western Australia Perth 6009 Australia
| | | | - Dylan Jayatilaka
- School of Molecular Sciences The University of Western Australia Perth 6009 Australia
| | - Alison J. Edwards
- Australian Nuclear Science and Technology Organisation (ANSTO), Lucas Heights Sydney NSW 2232 Australia
| | - Mark A. Spackman
- School of Molecular Sciences The University of Western Australia Perth 6009 Australia
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161
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Thomas SP, Shi MW, Koutsantonis GA, Jayatilaka D, Edwards AJ, Spackman MA. The Elusive Structural Origin of Plastic Bending in Dimethyl Sulfone Crystals with Quasi‐isotropic Crystal Packing. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201701972] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Sajesh P. Thomas
- School of Molecular Sciences The University of Western Australia Perth 6009 Australia
| | - Ming W. Shi
- School of Molecular Sciences The University of Western Australia Perth 6009 Australia
| | | | - Dylan Jayatilaka
- School of Molecular Sciences The University of Western Australia Perth 6009 Australia
| | - Alison J. Edwards
- Australian Nuclear Science and Technology Organisation (ANSTO), Lucas Heights Sydney NSW 2232 Australia
| | - Mark A. Spackman
- School of Molecular Sciences The University of Western Australia Perth 6009 Australia
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162
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Rao Khandavilli UB, Bhogala BR, Maguire AR, Lawrence SE. Symmetry assisted tuning of bending and brittle multi-component forms of probenecid. Chem Commun (Camb) 2017; 53:3381-3384. [PMID: 28265636 DOI: 10.1039/c7cc01091e] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The mechanical flexibility known in the antihyperuricemia drug probenecid has been extended into multi-component systems using co-formers with two donor or acceptor sites, in contrast to systems with a single H-bond acceptor that exhibit brittle behaviour. The piperazinium salt demonstrates that GRAS co-formers can be used to maintain mechanical flexibility with drug molecules.
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Affiliation(s)
- U B Rao Khandavilli
- Department of Chemistry, Analytical and Biological Chemistry Research Facility, Synthesis and Solid State Pharmaceutical Centre, University College Cork, Ireland.
| | - Balakrishna R Bhogala
- Department of Chemistry, Analytical and Biological Chemistry Research Facility, Synthesis and Solid State Pharmaceutical Centre, University College Cork, Ireland.
| | - Anita R Maguire
- Department of Chemistry and School of Pharmacy, Analytical and Biological Chemistry Research Facility, Synthesis and Solid State Pharmaceutical Centre, University College Cork, Cork, Ireland
| | - Simon E Lawrence
- Department of Chemistry, Analytical and Biological Chemistry Research Facility, Synthesis and Solid State Pharmaceutical Centre, University College Cork, Ireland.
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163
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Pejov L, Panda MK, Moriwaki T, Naumov P. Probing Structural Perturbation in a Bent Molecular Crystal with Synchrotron Infrared Microspectroscopy and Periodic Density Functional Theory Calculations. J Am Chem Soc 2017; 139:2318-2328. [DOI: 10.1021/jacs.6b11212] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Ljupčo Pejov
- Institute
of Chemistry, Faculty of Natural Sciences and Mathematics, Ss. Cyril and Methodius University, MK−1000 Skopje, Macedonia
| | - Manas K. Panda
- New York University Abu Dhabi, P.O. Box 129188, Abu Dhabi, United Arab Emirates
| | - Taro Moriwaki
- Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo, Hyogo 679-5198, Japan
| | - Panče Naumov
- Institute
of Chemistry, Faculty of Natural Sciences and Mathematics, Ss. Cyril and Methodius University, MK−1000 Skopje, Macedonia
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164
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Horstman EM, Keswani RK, Frey BA, Rzeczycki PM, LaLone V, Bertke JA, Kenis PJA, Rosania GR. Elasticity in Macrophage-Synthesized Biocrystals. Angew Chem Int Ed Engl 2017; 56:1815-1819. [PMID: 28079296 PMCID: PMC5514847 DOI: 10.1002/anie.201611195] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2016] [Indexed: 01/22/2023]
Abstract
Supramolecular crystalline assembly constitutes a rational approach to bioengineer intracellular structures. Here, biocrystals of clofazimine (CFZ) that form in vivo within macrophages were measured to have marked curvature. Isolated crystals, however, showed reduced curvature suggesting that intracellular forces bend these drug crystals. Consistent with the ability of biocrystals to elastically deform, the inherent crystal structure of the principal molecular component of the biocrystals-the hydrochloride salt of CFZ (CFZ-HCl)-has a corrugated packing along the (001) face and weak dispersive bonding in multiple directions. These characteristics were previously found to be linked to the elasticity of other organic crystals. Internal stress in bent CFZ-HCl led to photoelastic effects on the azimuthal orientation of polarized light transmittance. We propose that elastic, intracellular crystals can serve as templates to construct functional microdevices with different applications.
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Affiliation(s)
- Elizabeth M Horstman
- Department of Chemical and Biomolecular Engineering, University of Illinois, Urbana-Champaign, 600 South Mathews Street, Urbana, IL, 61801, USA
| | - Rahul K Keswani
- Department of Pharmaceutical Sciences, College of Pharmacy, University of Michigan, Ann Arbor, 428 Church Street, Ann Arbor, MI, 48109, USA
| | - Benjamin A Frey
- Morgan State University, 1700 E Cold Spring Ln, Baltimore, MD, 21251, USA
| | - Phillip M Rzeczycki
- Department of Pharmaceutical Sciences, College of Pharmacy, University of Michigan, Ann Arbor, 428 Church Street, Ann Arbor, MI, 48109, USA
| | - Vernon LaLone
- Department of Pharmaceutical Sciences, College of Pharmacy, University of Michigan, Ann Arbor, 428 Church Street, Ann Arbor, MI, 48109, USA
| | - Jeffery A Bertke
- School of Chemical Sciences, University of Illinois, Urbana-Champaign, 505 South Mathews Street, Urbana, IL, 61801, USA
| | - Paul J A Kenis
- Department of Chemical and Biomolecular Engineering, University of Illinois, Urbana-Champaign, 600 South Mathews Street, Urbana, IL, 61801, USA
| | - Gus R Rosania
- Department of Pharmaceutical Sciences, College of Pharmacy, University of Michigan, Ann Arbor, 428 Church Street, Ann Arbor, MI, 48109, USA
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165
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Horstman EM, Keswani RK, Frey BA, Rzeczycki PM, LaLone V, Bertke JA, Kenis PJA, Rosania GR. Elasticity in Macrophage-Synthesized Biocrystals. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201611195] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Elizabeth M. Horstman
- Department of Chemical and Biomolecular Engineering; University of Illinois, Urbana-Champaign; 600 South Mathews Street Urbana IL 61801 USA
| | - Rahul K. Keswani
- Department of Pharmaceutical Sciences; College of Pharmacy; University of Michigan, Ann Arbor; 428 Church Street Ann Arbor MI 48109 USA
| | - Benjamin A. Frey
- Morgan State University; 1700 E Cold Spring Ln Baltimore MD 21251 USA
| | - Phillip M. Rzeczycki
- Department of Pharmaceutical Sciences; College of Pharmacy; University of Michigan, Ann Arbor; 428 Church Street Ann Arbor MI 48109 USA
| | - Vernon LaLone
- Department of Pharmaceutical Sciences; College of Pharmacy; University of Michigan, Ann Arbor; 428 Church Street Ann Arbor MI 48109 USA
| | - Jeffery A. Bertke
- School of Chemical Sciences; University of Illinois, Urbana-Champaign; 505 South Mathews Street Urbana IL 61801 USA
| | - Paul J. A. Kenis
- Department of Chemical and Biomolecular Engineering; University of Illinois, Urbana-Champaign; 600 South Mathews Street Urbana IL 61801 USA
| | - Gus R. Rosania
- Department of Pharmaceutical Sciences; College of Pharmacy; University of Michigan, Ann Arbor; 428 Church Street Ann Arbor MI 48109 USA
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166
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Saini AK, Natarajan K, Mobin SM. A new multitalented azine ligand: elastic bending, single-crystal-to-single-crystal transformation and a fluorescence turn-on Al(iii) sensor. Chem Commun (Camb) 2017; 53:9870-9873. [DOI: 10.1039/c7cc04392a] [Citation(s) in RCA: 45] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A multifunctional azine ligand with elastic bending with full phase retention, photoinduced SCSC transformation and sensitive Al3+ detection.
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Affiliation(s)
- Anoop Kumar Saini
- Discipline of Chemistry
- Indian Institute of Technology Indore
- Indore 453552
- India
| | - Kaushik Natarajan
- Discipline of Metallurgy Engineering and Materials Science
- Indian Institute of Technology Indore
- Indore 453552
- India
| | - Shaikh M. Mobin
- Discipline of Chemistry
- Indian Institute of Technology Indore
- Indore 453552
- India
- Discipline of Metallurgy Engineering and Materials Science
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167
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Mulijanto CE, Quah HS, Tan GK, Donnadieu B, Vittal JJ. Curved crystal morphology, photoreactivity and photosalient behaviour of mononuclear Zn(II) complexes. IUCRJ 2017; 4:65-71. [PMID: 28250942 PMCID: PMC5331466 DOI: 10.1107/s2052252516019072] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2016] [Accepted: 11/29/2016] [Indexed: 06/02/2023]
Abstract
A dramatic effect of crystal morphology, photoreactivity and photosalient property is observed in a zinc(II) complex due to solvent effects and fluorine substitution at the backbone of the ligand. Of the two crystal forms with a 3-fluoro derivative, one yielded a curved morphology of single crystals and the second form shows photoreactivity in the solid state, whereas crystals of the 2-fluoro derivative pop during the [2 + 2] photocycloaddition reaction. This is the first report documenting curved single crystals of metal complexes obtained naturally during crystallization, although such bent crystals have been observed in extended solids naturally, or bent by mechanical force or by UV irradiation.
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Affiliation(s)
- Caroline Evania Mulijanto
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Hong Sheng Quah
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Geok Kheng Tan
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Bruno Donnadieu
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
| | - Jagadese J. Vittal
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, Singapore 117543, Singapore
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168
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Hübscher J, Seichter W, Weber E. Intermolecular contacts in the crystal structures of specifically varied halogen and protonic group substituted azines. CrystEngComm 2017. [DOI: 10.1039/c7ce00548b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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169
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Shang C, Zhang XJ, Liu ZP. Crystal phase transition of urea: what governs the reaction kinetics in molecular crystal phase transitions. Phys Chem Chem Phys 2017; 19:32125-32131. [DOI: 10.1039/c7cp07060h] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The predominant type-I hydrogen-bonding network in urea crystals facilitates the solid-to-solid transformation between major crystal forms.
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Affiliation(s)
- Cheng Shang
- Collaborative Innovation Center of Chemistry for Energy Material
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- Key Laboratory of Computational Physical Science (Ministry of Education)
- Department of Chemistry
- Fudan University
| | - Xiao-Jie Zhang
- Collaborative Innovation Center of Chemistry for Energy Material
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- Key Laboratory of Computational Physical Science (Ministry of Education)
- Department of Chemistry
- Fudan University
| | - Zhi-Pan Liu
- Collaborative Innovation Center of Chemistry for Energy Material
- Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials
- Key Laboratory of Computational Physical Science (Ministry of Education)
- Department of Chemistry
- Fudan University
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170
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Mishra MK, Mishra K, Syed Asif SA, Manimunda P. Structural analysis of elastically bent organic crystals using in situ indentation and micro-Raman spectroscopy. Chem Commun (Camb) 2017; 53:13035-13038. [DOI: 10.1039/c7cc08071a] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The structural dynamics of two elastically bendable, halogenated N-benzylideneaniline organic crystals were studied using an in situ three-point bending test and Raman spectroscopy.
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Affiliation(s)
- Manish Kumar Mishra
- Solid State and Structural Chemistry Unit
- Indian Institute of Science
- Bangalore 560 012
- India
| | - Kamini Mishra
- Inorganic and Physical Chemistry
- Indian Institute of Science
- Bangalore 560 012
- India
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171
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Edwards AJ, Mackenzie CF, Spackman PR, Jayatilaka D, Spackman MA. Intermolecular interactions in molecular crystals: what’s in a name? Faraday Discuss 2017; 203:93-112. [DOI: 10.1039/c7fd00072c] [Citation(s) in RCA: 81] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Structure–property relationships are the key to modern crystal engineering, and for molecular crystals this requires both a thorough understanding of intermolecular interactions, and the subsequent use of this to create solids with desired properties. There has been a rapid increase in publications aimed at furthering this understanding, especially the importance of non-canonical interactions such as halogen, chalcogen, pnicogen, and tetrel bonds. Here we show how all of these interactions – and hydrogen bonds – can be readily understood through their common origin in the redistribution of electron density that results from chemical bonding. This redistribution is directly linked to the molecular electrostatic potential, to qualitative concepts such as electrostatic complementarity, and to the calculation of quantitative intermolecular interaction energies. Visualization of these energies, along with their electrostatic and dispersion components, sheds light on the architecture of molecular crystals, in turn providing a link to actual crystal properties.
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Affiliation(s)
- Alison J. Edwards
- Australian Centre for Neutron Scattering
- Australian Nuclear Science and Technology Organization
- Lucas Heights
- Australia
| | | | - Peter R. Spackman
- School of Molecular Sciences
- University of Western Australia
- Perth
- Australia
| | - Dylan Jayatilaka
- School of Molecular Sciences
- University of Western Australia
- Perth
- Australia
| | - Mark A. Spackman
- School of Molecular Sciences
- University of Western Australia
- Perth
- Australia
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172
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Abstract
Flexible organic materials possessing useful electrical properties, such as ferroelectricity, are of crucial importance in the engineering of electronic devices. Up until now, however, only ferroelectric polymers have intrinsically met this flexibility requirement, leaving small-molecule organic ferroelectrics with room for improvement. Since both flexibility and ferroelectricity are rare properties on their own, combining them in one crystalline organic material is challenging. Herein, we report that trisubstituted haloimidazoles not only display ferroelectricity and piezoelectricity-the properties that originate from their non-centrosymmetric crystal lattice-but also lend their crystalline mechanical properties to fine-tuning in a controllable manner by disrupting the weak halogen bonds between the molecules. This element of control makes it possible to deliver another unique and highly desirable property, namely crystal flexibility. Moreover, the electrical properties are maintained in the flexible crystals.
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173
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Affiliation(s)
- Patrick Commins
- New York University Abu Dhabi; Abu Dhabi United Arab Emirates
| | - Hideyuki Hara
- Bruker Biospin K.K.; 3-9, Moriya, Kanagawa, Yokohama Kanagawa 221-0022 Japan
| | - Panče Naumov
- New York University Abu Dhabi; Abu Dhabi United Arab Emirates
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174
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Commins P, Hara H, Naumov P. Self-Healing Molecular Crystals. Angew Chem Int Ed Engl 2016; 55:13028-13032. [DOI: 10.1002/anie.201606003] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2016] [Indexed: 11/10/2022]
Affiliation(s)
- Patrick Commins
- New York University Abu Dhabi; Abu Dhabi United Arab Emirates
| | - Hideyuki Hara
- Bruker Biospin K.K.; 3-9, Moriya, Kanagawa, Yokohama Kanagawa 221-0022 Japan
| | - Panče Naumov
- New York University Abu Dhabi; Abu Dhabi United Arab Emirates
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175
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Karothu DP, Weston J, Desta IT, Naumov P. Shape-Memory and Self-Healing Effects in Mechanosalient Molecular Crystals. J Am Chem Soc 2016; 138:13298-13306. [PMID: 27618207 DOI: 10.1021/jacs.6b07406] [Citation(s) in RCA: 102] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The thermosalient crystals of terephthalic acid are extraordinarily mechanically compliant and reversibly shape-shift between two forms with different crystal habits. While the transition of form II to form I is spontaneous, the transition of form I to form II is latent and can be triggered by applying local mechanical stress, whereby crystals leap several centimeters in air. This mechanosalient effect (mechanically stimulated motility) is due to sudden release of strain that has accrued in the crystal of form I, which is a metastable structure at ambient conditions. High-speed optical analysis and serial scanning electron microscopy reveal that the mechanical effect is due to rapid reshaping of crystal domains on a millisecond time scale triggered by mechanical stimulation. Mechanically pre-deformed crystals taken over the thermal phase transition exhibit memory effects and partially regain their shape, while cracked, sliced, or otherwise damaged crystals tend to recover their macroscopic integrity by restorative action of intermolecular π-π interactions in a manner which resembles the behavior of shape-memory and self-healing polymers. These observations provide additional evidence that the thermo-/photo-/mechanosalient effects are macroscopic manifestations of martensitic-type transitions in molecular solids.
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Affiliation(s)
- Durga Prasad Karothu
- New York University Abu Dhabi , P.O. Box 129188, Abu Dhabi, United Arab Emirates
| | - James Weston
- New York University Abu Dhabi , P.O. Box 129188, Abu Dhabi, United Arab Emirates
| | - Israel Tilahun Desta
- New York University Abu Dhabi , P.O. Box 129188, Abu Dhabi, United Arab Emirates
| | - Panče Naumov
- New York University Abu Dhabi , P.O. Box 129188, Abu Dhabi, United Arab Emirates
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176
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Krishna GR, Devarapalli R, Lal G, Reddy CM. Mechanically Flexible Organic Crystals Achieved by Introducing Weak Interactions in Structure: Supramolecular Shape Synthons. J Am Chem Soc 2016; 138:13561-13567. [DOI: 10.1021/jacs.6b05118] [Citation(s) in RCA: 218] [Impact Index Per Article: 27.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Gamidi Rama Krishna
- Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur Campus, Mohanpur 741 246, India
| | - Ramesh Devarapalli
- Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur Campus, Mohanpur 741 246, India
| | - Garima Lal
- Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur Campus, Mohanpur 741 246, India
| | - C. Malla Reddy
- Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur Campus, Mohanpur 741 246, India
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177
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Li B, Zang SQ, Wang LY, Mak TC. Halogen bonding: A powerful, emerging tool for constructing high-dimensional metal-containing supramolecular networks. Coord Chem Rev 2016. [DOI: 10.1016/j.ccr.2015.09.005] [Citation(s) in RCA: 193] [Impact Index Per Article: 24.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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178
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Hayashi S, Koizumi T. Elastic Organic Crystals of a Fluorescent π-Conjugated Molecule. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201509319] [Citation(s) in RCA: 69] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Shotaro Hayashi
- Department of Applied Chemistry; National Defence Academy; 1-10-20 Hashirimizu Yokosuka 239-8686 Japan
| | - Toshio Koizumi
- Department of Applied Chemistry; National Defence Academy; 1-10-20 Hashirimizu Yokosuka 239-8686 Japan
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179
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Hayashi S, Koizumi T. Elastic Organic Crystals of a Fluorescent π-Conjugated Molecule. Angew Chem Int Ed Engl 2016; 55:2701-4. [DOI: 10.1002/anie.201509319] [Citation(s) in RCA: 157] [Impact Index Per Article: 19.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2015] [Revised: 11/16/2015] [Indexed: 01/30/2023]
Affiliation(s)
- Shotaro Hayashi
- Department of Applied Chemistry; National Defence Academy; 1-10-20 Hashirimizu Yokosuka 239-8686 Japan
| | - Toshio Koizumi
- Department of Applied Chemistry; National Defence Academy; 1-10-20 Hashirimizu Yokosuka 239-8686 Japan
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180
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Seki T, Ito H. Molecular-Level Understanding of Structural Changes of Organic Crystals Induced by Macroscopic Mechanical Stimulation. Chemistry 2016; 22:4322-9. [DOI: 10.1002/chem.201504361] [Citation(s) in RCA: 67] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2015] [Indexed: 11/05/2022]
Affiliation(s)
- Tomohiro Seki
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo, Hokkaido 060-8628 Japan
| | - Hajime Ito
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo, Hokkaido 060-8628 Japan
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181
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Bushuyev OS, Tomberg A, Vinden JR, Moitessier N, Barrett CJ, Friščić T. Azo⋯phenyl stacking: a persistent self-assembly motif guides the assembly of fluorinated cis-azobenzenes into photo-mechanical needle crystals. Chem Commun (Camb) 2016; 52:2103-6. [DOI: 10.1039/c5cc08590j] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
We describe a novel, persistent motif of molecular assembly in photo-mechanical crystals and cocrystals of fluorinated cis-azobenzenes.
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Affiliation(s)
| | - Anna Tomberg
- Department of Chemistry
- McGill University
- Montreal
- Canada
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182
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Khavasi HR, Ghanbarpour A, Tehrani AA. The role of intermolecular interactions involving halogens in the supramolecular architecture of a series of Mn(ii) coordination compounds. RSC Adv 2016. [DOI: 10.1039/c5ra25192c] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Abstract
This study reveals the role of halogen-involving interactions in structural changes of supramolecular assemblies of manganese(ii) complexes including N-(4-halo)phenyl picolinamide ligands.
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183
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Bushuyev OS, Friščić T, Barrett CJ. Photo-induced motion of azo dyes in organized media: from single and liquid crystals, to MOFs and machines. CrystEngComm 2016. [DOI: 10.1039/c6ce01128d] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Incorporation of photo-reversible azo dyes into molecular assemblies provides a new family of advanced optical and photo-mechanical materials that enable the direct transformation of light energy into mechanical motion.
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Affiliation(s)
- O. S. Bushuyev
- Department of Chemistry
- McGill University
- Montreal, Canada
| | - T. Friščić
- Department of Chemistry
- McGill University
- Montreal, Canada
| | - C. J. Barrett
- Department of Chemistry
- McGill University
- Montreal, Canada
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184
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Naumov P, Chizhik S, Panda MK, Nath NK, Boldyreva E. Mechanically Responsive Molecular Crystals. Chem Rev 2015; 115:12440-90. [PMID: 26535606 DOI: 10.1021/acs.chemrev.5b00398] [Citation(s) in RCA: 472] [Impact Index Per Article: 52.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Panče Naumov
- New York University Abu Dhabi , P.O. Box 129188, Abu Dhabi, United Arab Emirates
| | - Stanislav Chizhik
- Institute of Solid State Chemistry and Mechanochemistry, Siberian Branch of Russian Academy of Sciences , ul. Kutateladze, 18, Novosibirsk 630128, Russia.,Novosibirsk State University , ul. Pirogova, 2, Novosibirsk 630090, Russia
| | - Manas K Panda
- New York University Abu Dhabi , P.O. Box 129188, Abu Dhabi, United Arab Emirates
| | - Naba K Nath
- New York University Abu Dhabi , P.O. Box 129188, Abu Dhabi, United Arab Emirates
| | - Elena Boldyreva
- Institute of Solid State Chemistry and Mechanochemistry, Siberian Branch of Russian Academy of Sciences , ul. Kutateladze, 18, Novosibirsk 630128, Russia.,Novosibirsk State University , ul. Pirogova, 2, Novosibirsk 630090, Russia
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185
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Avinash MB, Raut D, Mishra MK, Ramamurty U, Govindaraju T. Bioinspired Reductionistic Peptide Engineering for Exceptional Mechanical Properties. Sci Rep 2015; 5:16070. [PMID: 26525957 PMCID: PMC4630637 DOI: 10.1038/srep16070] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2015] [Accepted: 10/06/2015] [Indexed: 12/31/2022] Open
Abstract
A simple solution-processing and self-assembly approach that exploits the synergistic interactions between multiple hydrogen bonded networks and aromatic interactions was utilized to synthesize molecular crystals of cyclic dipeptides (CDPs), whose molecular weights (~0.2 kDa) are nearly three orders of magnitude smaller than that of natural structural proteins (50–300 kDa). Mechanical properties of these materials, measured using the nanoindentation technique, indicate that the stiffness and strength are comparable and sometimes better than those of natural fibres. The measured mechanical responses were rationalized by recourse to the crystallographic structural analysis and intermolecular interactions in the self-assembled single crystals. With this work we highlight the significance of developing small molecule based bioinspired design strategies to emulate biomechanical properties. A particular advantage of the successfully demonstrated reductionistic strategy of the present work is its amenability for realistic industrial scale manufacturing of designer biomaterials with desired mechanical properties.
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Affiliation(s)
- M B Avinash
- Bioorganic Chemistry Laboratory, New Chemistry Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur P. O., Bengaluru 560064, India
| | - Devaraj Raut
- Department of Materials Engineering, Indian Institute of Science, Bengaluru 560012, India
| | - Manish Kumar Mishra
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bengaluru 560012, India
| | - Upadrasta Ramamurty
- Department of Materials Engineering, Indian Institute of Science, Bengaluru 560012, India.,Center of Excellence for Advanced Materials Research, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - T Govindaraju
- Bioorganic Chemistry Laboratory, New Chemistry Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur P. O., Bengaluru 560064, India
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186
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Krishna GR, Devarapalli R, Prusty R, Liu T, Fraser CL, Ramamurty U, Reddy CM. Structure-mechanical property correlations in mechanochromic luminescent crystals of boron difluoride dibenzoylmethane derivatives. IUCRJ 2015; 2:611-619. [PMID: 26594368 PMCID: PMC4645105 DOI: 10.1107/s2052252515015134] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/17/2015] [Accepted: 08/14/2015] [Indexed: 06/05/2023]
Abstract
The structure and mechanical properties of crystalline materials of three boron difluoride dibenzoylmethane (BF2dbm) derivatives were investigated to examine the correlation, if any, among mechanochromic luminescence (ML) behaviour, solid-state structure, and the mechanical behaviour of single crystals. Qualitative mechanical deformation tests show that the crystals of BF2dbm( (t) Bu)2 can be bent permanently, whereas those of BF2dbm(OMe)2 exhibit an inhomogeneous shearing mode of deformation, and finally BF2dbmOMe crystals are brittle. Quantitative mechanical analysis by nano-indentation on the major facets of the crystals shows that BF2dbm( (t) Bu)2 is soft and compliant with low values of elastic modulus, E, and hardness, H, confirming its superior suceptibility for plastic deformation, which is attributed to the presence of a multitude of slip systems in the crystal structure. In contrast, both BF2dbm(OMe)2 and BF2dbmOMe are considerably stiffer and harder with comparable E and H, which are rationalized through analysis of the structural attributes such as the intermolecular interactions, slip systems and their relative orientation with respect to the indentation direction. As expected from the qualitative mechanical behaviour, prominent ML was observed in BF2dbm( (t) Bu)2, whereas BF2dbm(OMe)2 exhibits only a moderate ML and BF2dbmOMe shows no detectable ML, all examined under identical conditions. These results confirm that the extent of ML in crystalline organic solid-state fluorophore materials can be correlated positively with the extent of plasticity (low recovery). In turn, they offer opportunities to design new and improved efficient ML materials using crystal engineering principles.
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Affiliation(s)
- Gamidi Rama Krishna
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur Campus, Mohanpur 741252, India
| | - Ramesh Devarapalli
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur Campus, Mohanpur 741252, India
| | - Rajesh Prusty
- Department of Materials Engineering, Indian Institute of Science, Bangalore 560012, India
| | - Tiandong Liu
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, USA
| | - Cassandra L. Fraser
- Department of Chemistry, University of Virginia, Charlottesville, Virginia 22904, USA
| | - Upadrasta Ramamurty
- Department of Materials Engineering, Indian Institute of Science, Bangalore 560012, India
- Center of Excellence for Advanced Materials Research, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Chilla Malla Reddy
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur Campus, Mohanpur 741252, India
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187
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Mishra MK, Mukherjee A, Ramamurty U, Desiraju GR. Crystal chemistry and photomechanical behavior of 3,4-dimethoxycinnamic acid: correlation between maximum yield in the solid-state topochemical reaction and cooperative molecular motion. IUCRJ 2015; 2:653-660. [PMID: 26594373 PMCID: PMC4645110 DOI: 10.1107/s2052252515017297] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/07/2015] [Accepted: 09/16/2015] [Indexed: 06/05/2023]
Abstract
A new monoclinic polymorph, form II (P21/c, Z = 4), has been isolated for 3,4-dimethoxycinnamic acid (DMCA). Its solid-state 2 + 2 photoreaction to the corresponding α-truxillic acid is different from that of the first polymorph, the triclinic form I ([Formula: see text], Z = 4) that was reported in 1984. The crystal structures of the two forms are rather different. The two polymorphs also exhibit different photomechanical properties. Form I exhibits photosalient behavior but this effect is absent in form II. These properties can be explained on the basis of the crystal packing in the two forms. The nanoindentation technique is used to shed further insights into these structure-property relationships. A faster photoreaction in form I and a higher yield in form II are rationalized on the basis of the mechanical properties of the individual crystal forms. It is suggested that both Schmidt-type and Kaupp-type topochemistry are applicable for the solid-state trans-cinnamic acid photodimerization reaction. Form I of DMCA is more plastic and seems to react under Kaupp-type conditions with maximum molecular movements. Form II is more brittle, and its interlocked structure seems to favor Schmidt-type topochemistry with minimum molecular movement.
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Affiliation(s)
- Manish Kumar Mishra
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Arijit Mukherjee
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore 560 012, India
- Division of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200 F, B-3001 Leuven, Belgium
| | - Upadrasta Ramamurty
- Department of Materials Engineering, Indian Institute of Science, Bangalore 560 012, India
- Centre for Excellence for Advanced Materials Research, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Gautam R. Desiraju
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore 560 012, India
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188
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Azuri I, Meirzadeh E, Ehre D, Cohen SR, Rappe AM, Lahav M, Lubomirsky I, Kronik L. Unusually Large Young’s Moduli of Amino Acid Molecular Crystals. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201505813] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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189
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Azuri I, Meirzadeh E, Ehre D, Cohen SR, Rappe AM, Lahav M, Lubomirsky I, Kronik L. Unusually Large Young's Moduli of Amino Acid Molecular Crystals. Angew Chem Int Ed Engl 2015; 54:13566-70. [PMID: 26373817 DOI: 10.1002/anie.201505813] [Citation(s) in RCA: 56] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2015] [Indexed: 11/08/2022]
Abstract
Young's moduli of selected amino acid molecular crystals were studied both experimentally and computationally using nanoindentation and dispersion-corrected density functional theory. The Young modulus is found to be strongly facet-dependent, with some facets exhibiting exceptionally high values (as large as 44 GPa). The magnitude of Young's modulus is strongly correlated with the relative orientation between the underlying hydrogen-bonding network and the measured facet. Furthermore, we show computationally that the Young modulus can be as large as 70-90 GPa if facets perpendicular to the primary direction of the hydrogen-bonding network can be stabilized. This value is remarkably high for a molecular solid and suggests the design of hydrogen-bond networks as a route for rational design of ultra-stiff molecular solids.
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Affiliation(s)
- Ido Azuri
- Department of Materials and Interfaces, Weizmann Institute of Science, Rehovoth 76100 (Israel)
| | - Elena Meirzadeh
- Department of Materials and Interfaces, Weizmann Institute of Science, Rehovoth 76100 (Israel)
| | - David Ehre
- Department of Materials and Interfaces, Weizmann Institute of Science, Rehovoth 76100 (Israel)
| | - Sidney R Cohen
- Chemical Research Support, Weizmann Institute of Science, Rehovoth 76100 (Israel)
| | - Andrew M Rappe
- The Makineni Theoretical Laboratories, Department of Chemistry, University of Pennsylvania, Philadelphia, PA 19104-6323 (USA)
| | - Meir Lahav
- Department of Materials and Interfaces, Weizmann Institute of Science, Rehovoth 76100 (Israel)
| | - Igor Lubomirsky
- Department of Materials and Interfaces, Weizmann Institute of Science, Rehovoth 76100 (Israel).
| | - Leeor Kronik
- Department of Materials and Interfaces, Weizmann Institute of Science, Rehovoth 76100 (Israel).
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190
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Ghosh S, Mishra MK, Ganguly S, Desiraju GR. Dual Stress and Thermally Driven Mechanical Properties of the Same Organic Crystal: 2,6-Dichlorobenzylidene-4-fluoro-3-nitroaniline. J Am Chem Soc 2015; 137:9912-21. [DOI: 10.1021/jacs.5b05324] [Citation(s) in RCA: 118] [Impact Index Per Article: 13.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Soumyajit Ghosh
- Solid State and Structural
Chemistry Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Manish Kumar Mishra
- Solid State and Structural
Chemistry Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Somnath Ganguly
- Solid State and Structural
Chemistry Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Gautam R. Desiraju
- Solid State and Structural
Chemistry Unit, Indian Institute of Science, Bangalore 560 012, India
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191
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Mishra MK, Ramamurty U, Desiraju GR. Hardness Alternation in α,ω-Alkanedicarboxylic Acids. Chem Asian J 2015; 10:2176-81. [PMID: 25919633 DOI: 10.1002/asia.201500322] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2015] [Indexed: 11/09/2022]
Abstract
The variation of hardness as a function of the number of carbon atoms in α,ω-alkanedicarboxylic acids, C(N)H(2N-2)O4 (4≤N≤9), was examined by recourse to nanoindentation on the major faces of single crystals. Hardness exhibits odd-even alternation, with the odd acids being softer and the even ones harder; the differences decrease with increasing chain length. These variations are similar to those seen for other mechanical, physical, and thermal properties of these diacids. The softness of odd acids is rationalized due to strained molecular conformations in them, which facilitate easier plastic deformation. Relationships between structural features, such as interplanar spacing, interlayer separation distance, molecular chain length, and signatures of the nanoindentation responses, namely, discrete displacement bursts, were also examined. Shear sliding of molecular layers past each other during indentation is key to the mechanism for plastic deformation in these organic crystals.
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Affiliation(s)
- Manish Kumar Mishra
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore, 560 012, India
| | - Upadrasta Ramamurty
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 560 012, India. .,Center of Excellence for Advanced Materials Research, King Abdulaziz University, Jeddah, 21589, Saudi Arabia.
| | - Gautam R Desiraju
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore, 560 012, India.
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192
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Chou CM, Nobusue S, Saito S, Inoue D, Hashizume D, Yamaguchi S. Highly bent crystals formed by restrained π-stacked columns connected via alkylene linkers with variable conformations. Chem Sci 2015; 6:2354-2359. [PMID: 29308149 PMCID: PMC5645777 DOI: 10.1039/c4sc03849e] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2014] [Accepted: 01/31/2015] [Indexed: 01/19/2023] Open
Abstract
A reproducible formation of strongly bent crystals was accomplished by structurally restraining macrocyclic π-conjugated molecules. The model π-units consist of two 9,10-bis(2-thienylethynyl)anthracenes with a strong propensity for stacking, which are connected in a macrocyclic fashion via two alkylene linkers. The correlation between the crystalline morphology and the macrocyclic structures restrained by a variety of flexible alkylene linker combinations was systematically studied. Bent crystals were obtained only with specific alkylene linkers of appropriate chain length. The alkylene linkers can adopt different conformations in the crystal packing, so as to fill voids within the macrocycle. The ability to form several similar molecular structures with different alkylene conformations gives rise to contaminations of different crystalline phases within a single crystal, and it is these phase contaminations which are responsible for the bending of the crystals.
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Affiliation(s)
- Chih-Ming Chou
- Department of Chemistry , Graduate School of Science , and Institute of Transformative Bio-Molecules (WPI-ITbM) , Nagoya University , Furo, Chikusa , Nagoya 464-8602 , Japan .
| | - Shunpei Nobusue
- Department of Chemistry , Graduate School of Science , and Institute of Transformative Bio-Molecules (WPI-ITbM) , Nagoya University , Furo, Chikusa , Nagoya 464-8602 , Japan .
| | - Shohei Saito
- Department of Chemistry , Graduate School of Science , and Institute of Transformative Bio-Molecules (WPI-ITbM) , Nagoya University , Furo, Chikusa , Nagoya 464-8602 , Japan .
| | - Daishi Inoue
- Materials Characterization Support Unit , RIKEN Center for Emergent Matter Science (CEMS) , 2-1 Hirosawa , Wako , Saitama 351-0198 , Japan
| | - Daisuke Hashizume
- Materials Characterization Support Unit , RIKEN Center for Emergent Matter Science (CEMS) , 2-1 Hirosawa , Wako , Saitama 351-0198 , Japan
| | - Shigehiro Yamaguchi
- Department of Chemistry , Graduate School of Science , and Institute of Transformative Bio-Molecules (WPI-ITbM) , Nagoya University , Furo, Chikusa , Nagoya 464-8602 , Japan .
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193
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Mishra MK, Ramamurty U, Desiraju GR. Solid Solution Hardening of Molecular Crystals: Tautomeric Polymorphs of Omeprazole. J Am Chem Soc 2015; 137:1794-7. [DOI: 10.1021/ja512817f] [Citation(s) in RCA: 73] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Manish Kumar Mishra
- Solid
State and Structural Chemistry Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Upadrasta Ramamurty
- Department
of Materials Engineering, Indian Institute of Science, Bangalore 560 012, India
- Centre for Excellence for Advanced Materials Research King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Gautam R. Desiraju
- Solid
State and Structural Chemistry Unit, Indian Institute of Science, Bangalore 560 012, India
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194
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Shankar R, Asija M, Kociok-Köhn G, Molloy KC, Shestakova P. Growth modulation of bent micro crystals to single crystals in a one-dimensional coordination framework. RSC Adv 2015. [DOI: 10.1039/c5ra14510d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
Di-n-butyltinbis(O-methylmethylphosphonate), 1 exhibits the formation of slender micro crystallites with unique bending features and iodine-induced modulation of crystal morphology to cubic shaped single crystals.
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Affiliation(s)
- Ravi Shankar
- Department of Chemistry
- Indian Institute of Technology Delhi (IITD)
- New Delhi-110016
- India
| | - Meenal Asija
- Department of Chemistry
- Indian Institute of Technology Delhi (IITD)
- New Delhi-110016
- India
| | | | | | - Pavletta Shestakova
- Laboratory of Nuclear Magnetic Resonance
- Institute of Organic Chemistry
- Bulgarian Academy of Sciences
- 1113 Sofia
- Bulgaria
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195
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Mohamed RM, Mishra MK, AL-Harbi LM, Al-Ghamdi MS, Ramamurty U. Anisotropy in the mechanical properties of organic crystals: temperature dependence. RSC Adv 2015. [DOI: 10.1039/c5ra11656b] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Nanoindentation technique was employed on organic molecular crystals to investigate how the anisotropy in the mechanical behavior changes within the temperature range of 283 to 343 K.
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Affiliation(s)
- Reda M. Mohamed
- Chemistry Department
- Faculty of Science
- King Abdulaziz University
- Jeddah 21589
- Saudi Arabia
| | - Manish Kumar Mishra
- Solid State & Structural Chemistry Unit
- Indian Institute of Science
- Bangalore 560 012
- India
| | - Laila M. AL-Harbi
- Chemistry Department
- Faculty of Science
- King Abdulaziz University
- Jeddah 21589
- Saudi Arabia
| | - Mohammed S. Al-Ghamdi
- Physics Department
- Faculty of Science
- King Abdulaziz University
- Jeddah 21589
- Saudi Arabia
| | - Upadrasta Ramamurty
- Department of Materials Engineering
- Indian Institute of Science
- Bangalore 560 012
- India
- Center of Excellence for Advanced Materials Research
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