Root-to-shoot Cd translocation via the xylem is the major process determining shoot and grain cadmium accumulation in rice

The role of root apoplastic barriers in cadmium translocation and accumulation in cultivars of rice (Oryza sativa L.) with different Cd-accumulating characteristics

The radial translocation of cadmium (Cd) from the root to the shoot is one of the major processes affecting Cd accumulation in rice (Oryza sativa L.) grains, but few studies have focused on Cd apoplastic transport in rice. The aim of this study was to determine how apoplastic barriers affect Cd translocation via the apoplastic pathway, Cd accumulation levels in upper parts (shoot and grains) of rice cultivars, and the possible mechanism involved. Hydroponic and soil pot trials were conducted to study the development and chemical constituents of apoplastic barriers and their permeability to bypass flow, and to determine Cd localization in the roots of rice cultivars with different Cd-accumulating characteristics. The Cd accumulation in upper parts was positively correlated with bypass flow in the root and the apparent Cd concentration in the xylem, indicating that the apoplastic pathway may play an important role in Cd root-shoot translocation in rice. Apoplastic barriers were deposited closer to the root tip and were thicker in low Cd-accumulating cultivars than in high Cd-accumulating cultivars. The amounts and rates of increase in lignin and suberin were significantly higher in ZD14 (a low Cd-accumulating cultivar) than in FYXZ (a high Cd-accumulating cultivar) under Cd stress, indicating that stronger barriers were induced by Cd in ZD14. The stronger and earlier formation of barriers in the low Cd-accumulating cultivar decreased bypass flow more efficiently, so that more Cd was retained in the root during apoplastic translocation. This was confirmed by localization analyses of Cd in root transverse sections. These results suggest that apoplastic barriers reduce Cd root-to-shoot translocation via the apoplastic pathway, leading to lower Cd accumulation in the upper parts of rice plants. Bypass flow may have the potential to be used as a rapid screening indicator for low Cd-accumulating rice cultivars.

Overexpression of Rice OsHMA3 in Wheat Greatly Decreases Cadmium Accumulation in Wheat Grains

Cereals are a major dietary source of the toxic metal cadmium (Cd). Reducing Cd accumulation in cereal crops such as wheat (Triticum aestivum) is important for food safety and human health. In this study, we show that three diverse cultivars of wheat had a high Cd translocation from roots to shoots, similar to a rice (Oryza sativa) cultivar possessing a nonfunctional tonoplast Cd transporter OsHMA3. We investigated the function of TaHMA3 genes in wheat. Three TaHMA3 genes were identified in wheat, all of which encode tonoplast-localized proteins. However, heterologous expression of TaHMA3 genes in yeast showed no transport activities for Cd, which likely explains the low Cd sequestration in wheat roots and subsequently the high Cd translocation to wheat shoots. To increase Cd sequestration in wheat roots, we overexpressed a rice functional OsHMA3 gene in wheat driven by a strong constitutive Ubiquitin promoter. Overexpression of the OsHMA3 gene decreased root-to-shoot Cd translocation in wheat by nearly 10-fold and Cd accumulation in wheat grain by 96%. The results suggest that high Cd translocation is a common trait in wheat caused by a loss of the Cd transport function of TaHMA3 proteins. Transgenic wheat overexpressing a functional OsHMA3 gene offers a highly effective solution to decrease Cd accumulation in wheat grain.

Uptake, translocation and biotransformation of selenium nanoparticles in rice seedlings (Oryza sativa L.)

Background

Selenium (Se) in soil mainly consists of selenite, selenate, and elemental Se. However, little is known about the mechanism involved in the uptake and biotransformation of elemental Se by plants.

Results

In this study, the uptake, translocation, subcellular distribution and biotransformation of selenium nanoparticles (SeNPs) in rice (Oryza sativa L.), and a comparison with selenite and selenate, were investigated through hydroponic experiments. The study revealed that SeNPs could be absorbed by rice plants; and aquaporin inhibitor was responsible for a 60.4% inhibition of SeNP influx, while metabolic inhibitor was ineffective. However, the SeNPs uptake rate of rice roots was approximately 1.7 times slower than that of selenite or selenate. Under the SeNPs or selenite treatment, Se was primarily accumulated in roots rather than in shoots, whereas an opposite trend was observed with selenate treatment. Additionally, most of the absorbed Se was distributed in cell wall of the SeNPs or selenite treated-rice plants, while its proportion was the highest in soluble cytosol of the selenate treated-rice plants. The absorbed SeNPs or selenite was rapidly assimilated to organic forms, with SeMet being the most predominant species in both shoots and roots of the rice plants. However, following selenate treatment, Se(VI) remained as the most predominant species, and only a small amount of it was converted to organic forms.

Conclusion

Therefore, this study provides a deeper understanding of the mechanisms associated SeNPs uptake and biotransformation within plants.

Antimony symplastic and apoplastic absorption, compartmentation, and xylem translocation in Brassica parachinensis L. under antimonate and antimonite

Antimony (Sb) excess accumulation in edible parts of crops causes potential risks to human health. However, knowledge about the mechanisms of its accumulation within vegetable plants is still not well known. Here, we investigated the physiological processes of Sb involved in symplastic and apoplastic absorption, compartmentation by roots, and translocation in xylem in Brassica parachinensis L. exposed to antimonate (SbV) and antimonite (SbIII) forms. The results showed that plants treated with SbIII emerged to be more toxic than SbV as proved by the lower biomass and the higher concentrations of malonaldehyde (MDA) and hydrogen peroxide (H₂O₂) in plant tissues, especially at high dosages. The Sb concentration showed more in shoots but less in roots treated with SbV than with SbIII. The total Sb accumulation was higher under the SbV treatment than the SbIII treatment, mainly due to the higher accumulation in shoots. Additionally, the Sb concentration in symplastic flow of roots was higher exposed to SbV than SbIII, while no differences were found for the Sb concentration in apoplastic flow between them. Moreover, the Sb concentration in cell walls of roots was higher exposed to SbIII than SbV, especially at high levels. Furthermore, the Sb concentration in xylem was higher exposed to SbV than SbIII, and a greatly positive correlation was observed between the Sb concentrations in xylem and shoots. Overall, these findings revealed that vegetable plants accumulated more SbV than SbIII in edible parts mainly due to xylem translocation rather than root absorption.

Abscisic acid (ABA)-importing transporter 1 (AIT1) contributes to the inhibition of Cd accumulation via exogenous ABA application in Arabidopsis

Soil cadmium (Cd) accumulation presents risks to crop safety and productivity. However, through an exogenous application of abscisic acid (ABA), its accumulation in plants can be reduced and its toxicity mitigated, thereby providing an alternative strategy to counteract Cd contamination of arable soil. In the present study, we demonstrated that exogenous ABA application alleviates Cd-induced growth inhibition and photosynthetic damage in wild-type (Col-0) Arabidopsis plants. However, these positive effects were weakened in the ABA-importing transporter (AIT1)-deficient mutant (ait1). Through further analysis, we found that upon ABA application, the decrease in Cd level significantly differed among ait1, Col-0, and the two AIT1-overexpressing transgenic plants (AIT1ox-1 and AIT1ox-2), suggesting that AIT1 mediates the Cd-reducing effects of ABA. ABA application also inhibited the expression of IRT1, ZIP1, ZIP4, and Nramp1 in Col-0 plants subjected to Cd stress. However, significant differences among the genotypes (ait1, Col-0 and AIT1ox) were only observed in terms of IRT1 expression. Overall, our findings suggest that the suppression of Cd accumulation and restoration of plant growth by exogenous ABA require the ABA-importing activity of AIT1 to inhibit IRT1 expression.

Cadmium in plants: uptake, toxicity, and its interactions with selenium fertilizers

Cd is the third major contaminant of greatest hazard to the environment after mercury and lead and is considered as the only metal that poses health risks to both humans and animals at plant tissue concentrations that are generally not phytotoxic. Cd accumulation in plant shoots depends on Cd entry through the roots, sequestration within root vacuoles, translocation in the xylem and phloem, and Cd dilution within the plant shoot throughout its growth. Several metal transporters, processes, and channels are involved from the first step of Cd reaching the root cells and until its final accumulation in the edible parts of the plant. It is hard to demonstrate one step as the pivotal factor to decide the Cd tolerance or accumulation ability of plants since the role of a specific transporter/process varies among plant species and even cultivars. In this review, we discuss the sources of Cd pollutants, Cd toxicity to plants, and mechanisms of Cd uptake and redistribution in plant tissues. The metal transporters involved in Cd transport within plant tissues are also discussed and how their manipulation can control Cd uptake and/or translocation. Finally, we discuss the beneficial effects of Se on plants under Cd stress, and how it can minimize or mitigate Cd toxicity in plants.

Acropetal translocation of phenanthrene in wheat seedlings: Xylem or phloem pathway?

Due to the potential toxicity of polycyclic aromatic hydrocarbons (PAHs) to humans, the uptake and translocation of PAHs in food crops have gained much attention. However, it is still unclear whether phloem participates in the acropetal translocation of PAHs in plants. Herein, the evidence for acropetal translocation of phenanthrene (a model PAH) via phloem is firstly tested. Wheat (Triticum aestivum L.) new leaves contain significantly higher phenanthrene concentration than old leaves (P < 0.05), and the inhibitory effect on phenanthrene translocation is stronger in old leaves after abscisic acid and polyvinyl alcohol (two common transpiration inhibitors) application. Phenanthrene concentration in xylem sap is slightly higher than in phloem sap. Ring-girdling treatment can significantly reduce phenanthrene concentration in castor bean (Ricinus communis L.) leaves. Two-photon fluorescence microscope images indicate a xylem-to-phloem and acropetal phloem translocation of phenanthrene in castor bean stem. Therefore, phloem is involved in the acropetal translocation of phenanthrene in wheat seedlings, especially when the xylem is not mature enough in scattered vascular bundle plants. Our results provide a deeper understanding of PAH translocation in plants, which have significant implications for food safety and phytoremediation enhancement of PAH-contaminated soil and water.

Whole-Genome Sequencing of the NARO World Rice Core Collection (WRC) as the Basis for Diversity and Association Studies

Genebanks provide access to diverse materials for crop improvement. To utilize and evaluate them effectively, core collections, such as the World Rice Core Collection (WRC) in the Genebank at the National Agriculture and Food Research Organization, have been developed. Because the WRC consists of 69 accessions with a high degree of genetic diversity, it has been used for >300 projects. To allow deeper investigation of existing WRC data and to further promote research using Genebank rice accessions, we performed whole-genome resequencing of these 69 accessions, examining their sequence variation by mapping against the Oryza sativa ssp. japonica Nipponbare genome. We obtained a total of 2,805,329 single nucleotide polymorphisms (SNPs) and 357,639 insertion-deletions. Based on the principal component analysis and population structure analysis of these data, the WRC can be classified into three major groups. We applied TASUKE, a multiple genome browser to visualize the different WRC genome sequences, and classified haplotype groups of genes affecting seed characteristics and heading date. TASUKE thus provides access to WRC genotypes as a tool for reverse genetics. We examined the suitability of the compact WRC population for genome-wide association studies (GWASs). Heading date, affected by a large number of quantitative trait loci (QTLs), was not associated with known genes, but several seed-related phenotypes were associated with known genes. Thus, for QTLs of strong effect, the compact WRC performed well in GWAS. This information enables us to understand genetic diversity in 37,000 rice accessions maintained in the Genebank and to find genes associated with different phenotypes. The sequence data have been deposited in DNA Data Bank of Japan Sequence Read Archive (DRA) (Supplementary Table S1).

Application of co-composted farm manure and biochar increased the wheat growth and decreased cadmium accumulation in plants under different water regimes

Toxic trace element pollution in the agricultural soils may negatively affect the plant growth. This study mainly focused on investigating the impact of co-composted biochar and farmyard manure (FYM) on wheat growth and cadmium (Cd) accumulation by plants. The different ratios of FYM and biochar were composted for two and half months and mixed in Cd-contaminated soil at a rate of 2% w/w of each treatment. After this, wheat seeds were sown in the soil at normal soil moisture (70% of soil water holding capacity (WHC)) level. After 50-day of sowing, both normal and drought stress (35% WHC) levels were applied and plants were harvested at 122 days after seed sowing. The results depicted that Cd and drought alone depressed the wheat growth, elevated the oxidative stress and Cd contents in wheat tissues. However, application of co-composted treatments increased the growth, yield, chlorophyll contents and minimized the oxidative stress in the leaves along with the reduction of Cd concentrations in wheat tissues mainly in grains. The amendments enhanced the post-harvest soil pH and minimized the soil bioavailable Cd. The increasing ratios of biochar in the compost were most effective in improving the growth and alleviating Cd toxicity and its concentration in grains. Overall, co-composted biochar and FYM might be suitable for reducing Cd in grains, but the field studies in different soils and plants are required to further explore the effects of these amendments before final recommendations.

Fractionation and chemical structure of dissolved organic matter in the rhizosphere associated with cadmium accumulation in tobacco lines (Nicotiana tabacum L.)

Reducing cadmium (Cd) accumulation in flue-cured tobacco is the main degree to reduce the harm of Cd to human health. In this study, a rhizobag experiment was conducted to investigate the characteristics of dissolved organic matter (DOM) in the rhizosphere of a low-Cd-accumulating tobacco line (RG11) and its role in the processes of Cd accumulation by plants. Cd concentrations in the roots and leaves of RG11 were 24.09-25.30 and 31.08-34.41% lower, respectively, than those of Yuyan5 under Cd stress. Cd exposure promoted DOM accumulation in the rhizosphere soils of the two tobacco lines. DOM concentrations in the rhizosphere soils of RG11 were 8.29-14.31% lower than those of Yuyan5 under Cd stress. RG11 presented less hydrophilic acid and hydrophilic base fractions, along with more hydrophobic acid and hydrophobic base fractions of DOM in the rhizosphere than those of Yuyan5 under Cd exposure. Fourier transform infrared spectroscopy results showed that RG11 exhibited less O-H, C-H, C=C, COO-, and C-O functional groups in rhizosphere DOM than those of Yuyan5 under Cd stress. Thus, the DOM in the rhizosphere of RG11 showed lower ability to solubilize Cd in soils, resulting in less Cd uptake by roots. This could be considered to be one of the important mechanisms of low Cd accumulation in leaves of RG11.

Cd accumulation, biomass and yield of rice are varied with silicon application at different growth phases under high concentration cadmium-contaminated soil

Many reports suggest that exogenous Si addition could reduce Cd translocation to aerial part and make grain safe for rice production. But it remains unclear whether its supplementation during different growth phases can differentially impact Cd uptake in rice. Here, Positive effects of Si applied at different growth phases on biomass and yield of rice were observed. Dry weight of shoot including stem, leaf and grain was enhanced significantly by 15% when Si added at transplanting stage. Grain-yields supplied with Si at transplanting, jointing and heading stages were increased obviously by 14%, 11% and 12%, respectively. Higher percentage of filled spikelet and lower unfilled spikelet number per panicle were found when Si supplied at jointing stage. The increases of Cd accumulation in rice plants by Si application were mainly manifested in roots. Compared to CK, Cd accumulation in root when Si applied at transplanting and tillering stages were elevated by 75% and 64%, respectively. While Cd accumulation in aboveground tissues were all declined by Si addition. Bioconcentration and translocation factors were decreased significantly when Si added at jointing stage. In addition, higher soil pH, lowest available Cd-concentration in soil and Cd²⁺ concentration in xylem sap at 15d after flowering were found when the Si was applied at jointing stage. Overall, Si application at transplanting would be more beneficial to the growth of rice and increased Cd content in root, while Si supplied at jointing would be more favorable for grain filling and reducing Cd accumulation in shoot.

Genotypic variation for cadmium tolerance in common bean (Phaseolus vulgaris L.)

Given the limitation of crop production in Cd-polluted areas, the identification and selection of plant genotypes tolerant to Cd stress are of great significance. In the present work, we show the existence of genotypic variation for Cd tolerance in common bean. The laboratory screening of 25 bean genotypes indicated a significant positive correlation of the mean productivity (MP) and the geometric mean productivity (GMP) with plant fresh weight both in control and Cd-treated plants. A principal component analysis further confirmed this variation and, together with other analyses, led to the selection of genotypes G-11867, Taylor, Emerson, and D-81083 as tolerant genotypes. A total of six bean genotypes with different degrees of Cd tolerance were selected, and their long-term physiological responses to Cd (0, 45, and 90 mg/kg soil) were evaluated. Increasing Cd concentrations led to higher Cd accumulation both in roots and shoots, and to significant rises in the levels of the oxidative stress biomarkers malondialdehyde (MDA), dityrosine (D-T), and 8-hydroxy-2'-deoxyguanosine (8-OH-2'-dG). Remarkable reductions in plant hormone levels and chlorophyll contents, as well as in dry and fresh weight, were observed in Cd-treated plants. Among the examined genotypes, Emerson, Taylor, and G-11867 were found to be more tolerant to Cd owing to lower Cd accumulation and lower oxidative stress levels, as well as higher chlorophyll and hormone contents. Our results contribute to the understanding of the physiological and biochemical basis of Cd tolerance in bean plants and may therefore, be useful for breeding programs directed towards obtaining bean varieties showing low Cd accumulation.

Identification of wheat (Triticum aestivum L.) genotypes for food safety on two different cadmium contaminated soils

Over the last decade, human population has been facing great challenges in ensuring appropriate supply of food free from cadmium (Cd) contamination. Selection of genetically low-Cd wheat (Triticum aestivum L.) genotypes, with a large biomass and high accumulation of Cd in straw but low-Cd concentration in grains, is an inventive approach of phytoremediation while keeping agricultural production in moderately contaminated soils. In this study, variations in Cd uptake and translocation among the 30 wheat genotypes in two different sites were investigated in field experiments. Significant differences in grain Cd concentration were observed between the two sites, with averaged values of 0.048 and 0.053 mg kg^-1 DW, respectively. Based on straw Cd accumulation, grain Cd concentration, and TF_rs, Bainong207 and Aikang58 for site A and Huaimai23 and Yannong21 for site B are promising candidates of low-Cd genotypes, which have considerable potential in achieving phytoremediation while keeping agricultural production on moderately or slightly Cd-polluted soil. The results indicate that it is possible to select the optimal low-Cd genotypes of wheat for different soil types by taking consideration of the effect of soil-wheat genotype interaction on grain Cd concentration.

Genotypic variation among 20 rice cultivars/landraces in response to cadmium stress grown locally in West Bengal, India

Cadmium (Cd) is a hazardous soil contaminant and causes environmental toxicity when present beyond the allowable limit in soil. It can alter growth and metabolism in both plants and animals even at very low concentration. Being sessile in nature, plants try to evade this harmful effect by adopting various defence mechanisms including activation of antioxidants and other metal homeostasis mechanisms. This study shows the varietal Cd stress tolerance capacity of rice cultivars commonly grown in West Bengal, which is a rice biodiversity region in India. Seven days old rice (Oryza sativa L.) seedlings were treated with 10 μM CdCl₂ for another 7days and different physiological and biochemical stress parameters were studied to compare the varietal stress responses. Principle component analysis (PCA) and root tolerance index (RTI) revealed that rice cultivars I.E.T-4786, Jamini and Netiya, Maharaj showed divergent stress responses towards susceptibility and tolerance. Histochemical localization of hydrogen peroxide (H₂O₂), superoxide (O₂˙^-) and pot experiment were performed in these four cultivars (I.E.T-4786-Jamini and Netiya-Maharaj) to elucidate the different Cd stress tolerance. Histochemical analysis, agronomic traits and grain Cd content analyses showed that I.E.T-4786 and Jamini were susceptible with no Cd accumulation in grain, whereas cultivars Netiya and Maharaj were stress tolerant and Cd accumulators. In addition, health risk assessment was monitored for dietary intake of Cd through Cd accumulating rice and non Cd accumulating rice genotypes were identified. Thus, the study identified the Cd tolerant and sensitive cultivars grown locally.

Enhanced accumulation of gibberellins rendered rice seedlings sensitive to ammonium toxicity

Ammonium (NH4+) phytotoxicity is a worldwide phenomenon, but the primary toxic mechanisms are still controversial. In the present study, we investigated the physiological function of gibberellins (GAs) in the response of rice plants to NH4+ toxicity and polyamine accumulation using GA biosynthesis-related rice mutants. Exposure to NH4+ significantly decreased GA4 production in shoots of wild-type (WT) plants. Both exogenous GA application to the WT and increases in endogenous GA levels in eui1 mutants rendered them more sensitive to NH4+ toxicity. In contrast, growth of sd1 GA-deficient mutants was more tolerant to NH4+ toxicity than that of their WT counterparts. The role of polyamines in GA-mediated NH4+ toxicity was evaluated using WT rice plants and their GA-related mutants. The eui1 mutants with GA overproduction displayed a higher endogenous putrescine (Put) accumulation than WT plants, leading to an enhanced Put/[spermidine (Spd)+spermine (Spm)] ratio in their shoots. In contrast, mutation of the SD1 gene encoding a defective enzyme in GA biosynthesis resulted in a significant increase in Spd and Spm production, and reduction in the Put/(Spd+Spm) ratio when exposed to a high NH4+ medium. Exogenous application of Put exacerbated symptoms associated with NH4+ toxicity in rice shoots, while the symptoms were alleviated by an inhibitor of Put biosynthesis. These findings highlight the involvement of GAs in NH4+ toxicity, and that GA-induced Put accumulation is responsible for the increased sensitivity to NH4+ toxicity in rice plants.

Selenite antagonizes the phytotoxicity of Cd in the cattail Typha angustifolia

The Phytotoxicity of and mechanism underlying selenite-mediated tolerance to Cd stress in Typha angustifolia were studied hydroponically with respect to metal uptake and translocation, photosynthesis-related parameters, contents of proline and O₂^•-, products of lipid peroxidation, cell viability, enzymatic and non-enzymatic antioxidants, glyoxalases and phytochelatins. T. angustifolia were exposed to 25, 50 and 100 μM of Cd alone and in conjunction with 5 mg L^-1 of selenite in full-strength Hoagland's nutrient solution for 30 days. Results showed that Cd contents in T. angustifolia leaves and roots increased in a dose-dependent manner and were higher in roots, but those of BAC, BCF and TF changed in a contrary pattern. Addition of selenite to Cd-containing treatments further reduced Cd levels in T. angustifolia leaves and roots, as well as BAC, BCF and TF. A diphasic effect was found in T. angustifolia for the contents of total chlorophyll, GSH, PC and GSSG, as well as activities of CAT, POD, SOD and GR, in response to Cd stress alone and in conjunction with selenite supplementation, but the same effect was not observed for Pn, Cond, Tr, Ci, Fv/Fm and ϕPSII. In contrast, exogenous selenite supplementation enhanced the contents of total chlorophyll and the non-enzymatic antioxidants, as well as activities of enzymatic antioxidants, while the values of photosynthetic fluorescence parameters were rescued. Selenite addition decreased Cd-induced cell death. Proline contents and Gly I activities in T. angustifolia leaves kept increasing in a dose-dependent manner of Cd concentrations in the growth media and selenite addition further enhanced both parameters. Addition of selenite could quench Cd-mediated generation of MDA, O₂^•- and MG in T. angustifolia leaves and reduce Cd-induced Gly II activity. A U-shaped GSH/GSSG ratio in T. angustifolia leaves suggests a possible trade-off between PC synthesis and GR activity since both share the same substrate GSH. Therefore, confined BAC, BCF and TF were a mechanism that confers T. angustifolia tolerance to Cd stress, and that exogenous selenite supplementation could depress Cd-induced stress in T. angustifolia by rescuing the photosynthetic fluorescence, enhancing non-enzymatic and enzymatic antioxidants that scavenge O₂^•- and MG, and potentiating PC synthesis that chelates Cd.

Sulfur controlled cadmium dissolution in pore water of cadmium-contaminated soil as affected by DOC under waterlogging

Cadmium (Cd) precipitation and dissolution in pore water is associated with dissolved organic carbon (DOC)-induced reduction-oxidation of sulfur (S) under waterlogging and is vital for controlling the bioavailability in paddy soil. A 120-day soil incubation experiment, including application of sulfur (S, 30 mg kg^-1) and wheat straw (W, 1.0%) alone or in combination (W + S) into Cd-contaminated paddy soil under waterlogging, was conducted to investigate the dynamic of dissolved Cd and its relationship with DOC, S^2-, Fe²⁺, pH, Eh and pe + pH in soil pore water. The results showed that the lowest dissolved Cd concentration was observed in the W + S-treated soil pore water among all treatments when the soil Eh remained at lower values during the period of 15-60 days of incubation, which could be attributed to CdS precipitation and/or co-precipitation of Cd absorbed by FeS₂ because of the reduction in sulfur. The application of S resulted in a Cd rebound in the pore water irrespective of W addition when the Eh began to increase from its lowest values during the period of 45-75 days of incubation, and SOB genera were observed in the S added soil. This could be attributed to re-dissolution of the precipitated Cd in soils under the SOB-driven oxidation of sulfide such as CdS and FeS₂. In conclusion, DOC-driven reduction-oxidation of sulfur controls Cd dissolution in the pore water of Cd-contaminated paddy soil under waterlogging conditions. Further studies are required to investigate the interaction of sulfur and SOM-induced DOC on Cd bioavailability in rice-planted paddy soils.

Characteristics of cadmium immobilization in the cell wall of root in a cadmium-safe rice line (Oryza sativa L.)

Cultivating cadmium (Cd)-safe rice lines, which show low Cd accumulation in brown rice, is generally beneficial to ensure food safety. The Cd retention in root of Cd-safe rice line D62B plays an important role in its low Cd translocation from root to shoot. To understand the mechanism of Cd retention in root, a hydroponic experiment was conducted to investigate the subcellular distribution of Cd and the contribution of polysaccharides to Cd binding to the root cell wall of a Cd-safe rice line D62B with a common rice line Luhui17 as a control material. D62B retained more Cd in the root by sequestrated a higher proportion of Cd in the cell wall, further it transferred less Cd to shoot. Close to half of the Cd in the root cell wall of D62B was accumulated in the hemicellulose 1 (HC1), and the proportions of HC1 in it were 1.2-1.7 times higher than these of Luhui17. The proportion of Cd in the pectin showed a dose-dependent increase in two rice lines. D62B contained significantly higher uronic acid concentrations of the pectin and greater pectin methyl esterase (PME) activities than Luhui17 in the root cell wall. These results indicated that a superior Cd binding capacity of the cell wall polysaccharides in D62B played an important role in its Cd retention in root.

The effect of sepiolite application on rice Cd uptake - A two-year field study in Southern China

Sepiolite (SEP) is a clay mineral with great potential to stabilize soil heavy metals. A two-year field experiment was conducted to explore the optimum use of SEP to immobilize soil Cd and to promote the consumption safety of rice grown in a typical paddy field in Southern China. SEP was applied once or twice over the two-year study at three levels (0.1, 0.5, and 1%, w/w) before rice planting. The results showed that SEP effectively reduced rice grain Cd concentrations by 47-49% in the first year and by 44-50% in the second year due to the residue effect. Application of SEP for two consecutive years reduced the rice grain Cd concentration by up to 75%, achieving a safe level (<0.2 mg kg^-1). SEP also reduced Zn concentrations in rice grains (by 6-10%), while the Cd/Zn ratios of rice grains were decreased by 24-72% over the two years, implying it was much safer for consumption. SEP significantly increased the soil pH (0.9-1.8 units) and available phosphorus, and it reduced the soil available Cd (by 20-95%) and Zn concentrations (by 30-99%). In brief, SEP effectively stabilized soil Cd and reduced uptake by rice; the effect was dose-dependent and 0.5% (w/w) was optimum in the present study. The main mechanism of SEP to stabilize soil Cd is the increase in soil pH analogous to liming. This study shows that SEP application can be an efficient way to remediate Cd contaminated rice paddies and fulfill the goal of safe production of rice and thereby reduce the health risks associated with consuming rice.

Metal(loid)s (As, Hg, Se, Pb and Cd) in paddy soil: Bioavailability and potential risk to human health

Rice is one of the principal staple foods, essential for safeguarding the global food and nutritional security, but due to different natural and anthropogenic sources, it also acts as one of the biggest reservoirs of potentially toxic metal(loids) like As, Hg, Se, Pb and Cd. This review summarizes mobilization, translocation and speciation mechanism of these metal(loids) in soil-plant continuum as well as available cost-effective remediation measures and future research needs to eliminate the long-term risk to human health. High concentrations of these elements not only cause toxicity problems in plants, but also in animals that consume them and gradual deposition of these elements leads to the risk of bioaccumulation. The extensive occurrence of contaminated rice grains globally poses substantial public health risk and merits immediate action. People living in hotspots of contamination are exposed to higher health risks, however, rice import/export among different countries make the problem of global concern. Accumulation of As, Hg, Se, Pb and Cd in rice grains can be reduced by reducing their bioavailability, and controlling their uptake by rice plants. The contaminated soils can be reclaimed by phytoremediation, bioremediation, chemical amendments and mechanical measures; however these methods are either too expensive and/or too slow. Integration of innovative agronomic practices like crop establishment methods and improved irrigation and nutrient management practices are important steps to help mitigate the accumulation in soil as well as plant parts. Adoption of transgenic techniques for development of rice cultivars with low accumulation in edible plant parts could be a realistic option that would permit rice cultivation in soils with high bioavailability of these metal(loid)s.

Evolution of Abscisic Acid Signaling for Stress Responses to Toxic Metals and Metalloids

Toxic heavy metals and metalloids in agricultural ecosystems are crucial factors that limit global crop productivity and food safety. Industrial toxic heavy metals and metalloids such as cadmium, lead, and arsenic have contaminated large areas of arable land in the world and their accumulation in the edible parts of crops is causing serious health risks to humans and animals. Plants have co-evolved with various concentrations of these toxic metals and metalloids in soil and water. Some green plant species have significant innovations in key genes for the adaptation of abiotic stress tolerance pathways that are able to tolerate heavy metals and metalloids. Increasing evidence has demonstrated that phytohormone abscisic acid (ABA) plays a vital role in the alleviation of heavy metal and metalloid stresses in plants. Here, we trace the evolutionary origins of the key gene families connecting ABA signaling with tolerance to heavy metals and metalloids in green plants. We also summarize the molecular and physiological aspects of ABA in the uptake, root-to-shoot translocation, chelation, sequestration, reutilization, and accumulation of key heavy metals and metalloids in plants. The molecular evolution and interaction between the ABA signaling pathway and mechanisms for heavy metal and metalloid tolerance are highlighted in this review. Therefore, we propose that it is promising to manipulate ABA signaling in plant tissues to reduce the uptake and accumulation of toxic heavy metals and metalloids in crops through the application of ABA-producing bacteria or ABA analogues. This may lead to improvements in tolerance of major crops to heavy metals and metalloids.

Foliar spray of TiO2 nanoparticles prevails over root application in reducing Cd accumulation and mitigating Cd-induced phytotoxicity in maize (Zea mays L.)

Cadmium (Cd) pollution is considered one of the global environmental issues due to its adverse effects on plant and human health. With the rapid development of nanotechnology and the practical application of engineered nanoparticles (ENPs) in agriculture, the mechanisms underlying the interactions between NPs and heavy metal on their uptake, accumulation, and phytotoxicity in crops are still not fully understood. Therefore, the impact of TiO₂ NPs (0, 100, 250 mg/L) and Cd (0, 50 μM) co-exposure on hydroponic maize (Zea mays L.) was determined under two exposure modes. Results showed that root co-exposure to TiO₂ NPs and 100 mg/L Cd significantly enhanced Cd uptake and produced greater phytotoxicity in maize than foliar exposure to TiO₂ NPs. Meanwhile, plant dry weight and chlorophyll content showed a reduction of 45.3% and 50.5%, respectively, when compared with single Cd treatment. In addition, the accumulation of Ti in shoots and roots increased by 1.61 and 4.29 times, respectively when root exposure to 250 mg/L TiO₂ NPs. By contrast, foliar exposure of TiO₂ NPs could markedly decrease shoot Cd contents from 15.2% to 17.8% and had a stronger influence on alleviating Cd-induced toxicity via increasing superoxide dismutase (SOD) and glutathione S-transferase (GST) activities and upregulating several metabolic pathways, including galactose metabolism and citrate cycle, alanine, aspartate and glutamate metabolism, as well as glycine, serine and threonine metabolism. This study provides a new strategy for the application of TiO₂ NPs in crop safety production in Cd contaminated soils.

The responses of cadmium phytotoxicity in rice and the microbial community in contaminated paddy soils for the application of different long-term N fertilizers

An eight-year field trial was conducted to investigate the effects of four different N fertilization treatments of urea (CO(NH₂)₂, the control), ammonium sulfate ((NH₄)₂SO₄), ammonium chloride (NH₄Cl), and ammonium hydrogen phosphate [(NH₄)₂HPO₄]) on cadmium (Cd) phytotoxicity in rice and soil microbial communities in a Cd-contaminated paddy of southern China. The results demonstrate that the different N treatments exerted different effects: the application of (NH₄)₂HPO₄ and (NH₄)₂SO₄ significantly increased rice grain yield and decreased soil-extractable Cd content when compared with those of the control, while NH₄Cl had a converse effect. Expression of genes related to Cd uptake (IRT and NRAPM genes) and transport (HMA genes) by roots may be responsible for Cd phytotoxicity in rice grown in the different N fertilization treatments. Our results further demonstrate that N fertilization had stronger effects on soil bacterial communities than fungal communities. The bacterial and fungal keystone species were identified by phylogenetic molecular ecological network (pMEN) analysis and mainly fell into the categories of Gammaproteobacteria, Acidobacteria and Actinobacteria for the bacterial species and Ascomycota for the fungal species; all of these keystone species were highly enriched in the (NH₄)₂HPO₄ treatment. Soil pH and soil available-Cd content emerged as the major determinants of microbial network connectors. These results could provide effective fertilizing strategies for alleviating Cd phytotoxicity in rice and enhance the understanding of its underlying microbial mechanisms.

Differences in root surface adsorption, root uptake, subcellular distribution, and chemical forms of Cd between low- and high-Cd-accumulating wheat cultivars

The differences in the mechanism of cadmium (Cd) accumulation in the grains of different wheat (Triticum aestivum L.) cultivars remain unclear. Thus, we conducted a hydroponic experiment in a greenhouse to compare root surface adsorption, root uptake, subcellular distribution, and chemical forms of Cd between low- and high-Cd-accumulating wheat cultivars at seedling stage, to improve our understanding of the differences between cultivars. The results showed that Cd adsorbed on the root surface was mainly in a complexed form, and the total amount of Cd on the Yaomai16 (YM, high-Cd-accumulating genotypes) root surface was higher (p < 0.05) than that on Xinmai9817 (XM, low-Cd-accumulating genotypes). A large amount of Cd ions adsorbed on root surface would cause plant damage and inhibit growth. Comparing the root-to-shoot translocation factors of Cd, the transfer coefficients of YM were 1.017, 1.446, 1.464, and 1.030 times higher than those of XM under 5, 10, 50, and 100 μmol L^-1 Cd treatments, respectively. The subcellular distribution of Cd under Cd exposure is mainly in the cell wall and soluble fraction. The proportions of Cd in YM shoot soluble fraction were higher than those in XM, which was the main detoxification mechanism limiting the activity of Cd and may be responsible for low Cd accumulation in grains, while the effects of the chemical forms of Cd on migration and detoxification were not found to be related to Cd accumulation in the kernels.

Amelioration effect of chromium-tolerant bacteria on growth, physiological properties and chromium mobilization in chickpea (Cicer arietinum) under chromium stress

In this study, chromium (Cr)-tolerant bacteria were test for their efficiency in alleviating Cr stress in Cicer arietinum plants. On the basis of 16S rRNA gene analysis, the isolates were identified belonging to genus Stenotrophomonas maltophilia, Bacillus thuringiensis B. cereus, and B. subtilis. The strains produced a considerable amount of indole-3-acetic acid in a medium supplemented with tryptophan. The strains also showed siderophore production (S2VWR5 and S3VKR17), phosphorus production (S1VKR11, S3VKR2, S3VKR16, and S2VWR5), and potassium solubilization (S3VKR2, S2VWR5, and S3VKR17). Furthermore, the strains were evaluated in pot experiments to assess the growth promotion of C. arietinum in the presence of chromium salts. Bacterization improved higher root and shoot length considerably to 6.25%-60.41% and 11.3%-59.6% over the control. The plants also showed increase in their fresh weight and dry weight in response to inoculation with Cr-tolerant strains. The accumulation of Cr was higher in roots compared to shoots in both control and inoculated plants, indicating phytostabilization of Cr by C. arietinum. However, phytostabilization was found to be improved manifold in inoculated plants. Apart from the plant attributes, the amendment of soil with Cr and Cr-tolerant bacteria significantly increased the content of total chlorophyll and carotenoids, suggesting the inoculant's role in protecting plants from deleterious effects. This work suggests that the combined activity of Cr-tolerant and plant growth-promoting (PGP) properties of the tested strains could be exploited for bioremediation of Cr and to enhance the C. arietinum cultivation in Cr-contaminated soils.

Hybrid ash/biochar biocomposites as soil amendments for the alleviation of cadmium accumulation by Oryza sativa L. in a contaminated paddy field

A novel ash/biochar (A/B) biocomposite composed of 90% biomass bottom ash from agroforestry biomass direct-fired power plants, 5% animal-derived biochar from carcass pyrolysis, and 5% bentonite as an adhesive was amended in cadmium (Cd)-polluted paddy soil to alleviate cadmium accumulation by Oryza sativa L. Ash increased the soil pH and contributed exogenous available silicon. Biochar with high Ca/P components played an important role in soil cadmium immobilization. A 1-year field experiment with consecutive rice growing seasons (early and late rice) was conducted in Xiangtan, China, to examine the effects of A/B amendment in Cd-contaminated paddy soil. The A/B biocomposite was amended into soil through one-time addition at three application rates (1, 5, and 10 kg/m²). When A/B amendment was ≥5 kg/m², the soil pH increased from 4.11 to more than 6. The available silicon content in the soil even increased by 22.9 times. For early rice soil, the CaCl₂-extractable Cd(II) and toxicity characteristic leaching procedure (TCLP)-extractable Cd(II) decreased by 77.9%-96.1% and 52.4%-70.7%, respectively. A/B remarkably reduced Cd accumulation in rice organs, and this observation was related to A/B treatment rates. Ash and biochar contributed to the inhibition of Cd accumulation in rice organs and Cd translocation from roots to stems. The Cd concentrations in brown rice decreased to 0.11 and 0.12 mg/kg in early and late rice, respectively, and these values were lower than the national food safety standard limit value of China (0.2 mg/kg).

Differences in cadmium accumulation between indica and japonica rice cultivars in the reproductive stage

Excessive cadmium (Cd) in rice grains is of great concern worldwide, particularly in southern China where heavy metal pollution in the soil is widespread. Much work has been done regarding the key genes responsible for Cd absorption, transport, and accumulation in rice, but little is known about the differences of Cd accumulation between indica and japonica rice cultivars during the reproductive stage. Furthermore, physiological parameters, such as nonstructural carbohydrate content, involved in Cd accumulation have not been fully elucidated. We studied several indica and japonica cultivars under three different Cd treatment levels and harvested them at different periods after heading. Differences in Cd accumulation between subspecies mainly were generated during the reproductive stage. An increase in the Cd pollution level caused the average absorption rate of Cd in the aerial parts of the indica cultivars in the reproductive stage to be 6.17, 4.52, and 3.89 times greater than that of the japonica cultivars across the three Cd treatments. The contribution of Cd absorption by shoots to Cd accumulation at the pre- or postheading stages was 33.8% and 66.2% in indica, and 44.9% and 55.1% in japonica. We found a significant negative correlation between Cd content in the rice grains and the content of nonstructural carbohydrates in the sheath (P < 0.05). Cd translocation from sheath to grain occurred along with sugar transfer in the indica cultivars. The Cd content of the indica cultivar grain was 1.84-4.14 times higher than that of the japonica cultivars (P < 0.05). The japonica cultivars thus met the cereal Cd limits of China (0.2 mg kg^-1) under low and moderate soil Cd pollution. These findings are helpful for the selection of proper cultivars and field management practices to alleviate Cd exposure risk in rice production.

Genetic mapping of ionomic quantitative trait loci in rice grain and straw reveals OsMOT1;1 as the putative causal gene for a molybdenum QTL qMo8

Rice is a major dietary source of essential mineral nutrients and toxic elements (aka ionome) for humans. However, the genetic basis underlying the variation in ionome is still largely unknown. Here, we mapped 51 and 61 quantitative trait loci (QTLs) controlling the concentrations of 13 and 15 elements in rice (Oryza sativa L.) grain and straw, respectively, using a recombinant inbred lines (RILs) that were grown at three different field sites in 3 years. Several QTLs were repeatedly detected in both grain and straw or in multiple years; the resulting 87 unique QTLs with 17 of them (20%) were co-localized with previously reported corresponding QTLs and 70 were novel ionomic QTLs. At least, 14 genomic clusters that controlled the concentrations of multiple elements were identified. Furthermore, we identified a molybdate transporter gene OsMOT1;1 as the putative causal gene for a QTL controlling molybdenum concentration in both straw and grain. QTL analyses based on the concentrations of multiple elements in both grain and straw of RIL population grown in three field sites in 3 years allow us to identify tissue common QTLs and reproducible QTLs that were validated in multiple years. The identification of ionomic QTLs will be useful in revealing the molecular mechanisms underlying the accumulation of elements in rice and providing the opportunity to reduce the accumulation of toxic elements and enrich the accumulation of beneficial elements in rice grain.

Comprehensive analysis of variation of cadmium accumulation in rice and detection of a new weak allele of OsHMA3

Excessive cadmium (Cd) accumulation in rice poses a potential threat to human health. Rice varieties vary in their Cd content, which depends mainly on root-to-shoot translocation of Cd. However, cultivars accumulating high Cd in the natural population have not been completely investigated. In this study, we analyzed the variation in Cd accumulation in a diverse panel of 529 rice cultivars. Only a small proportion (11 of 529) showed extremely high root-to-shoot Cd transfer rates, and in seven of these cultivars this was caused by two known OsHMA3 alleles. Using quantitative trait loci mapping, we identified a new OsHMA3 allele that was associated with high Cd accumulation in three of the remaining cultivars. Using heterologous expression in yeast and comparative analysis among different rice cultivars, we observed that this new allele was weak at both the transcriptional and protein levels compared with the functional OsHMA3 genotypes. The weak Cd transport activity was further demonstrated to be caused by a Gly to Arg substitution at position 512. Our study comprehensively analyzed the variation in root-to-shoot Cd translocation rates in cultivated rice and identified a new OsHMA3 allele that caused high Cd accumulation in a few rice cultivars.

Genetic properties of cadmium translocation from straw to brown rice in low-grain cadmium rice (Oryza sativa L.) line

Breeding the rice cultivar with high cadmium (Cd) accumulation in straw but with low Cd in brown rice using marker-assisted selection (MAS) based on quantitative trait loci (QTL) is meaningful for phytoremediation as well as safety in production. A restorer rice line, YaHui2816, steadily showed low Cd translocation from straw to brown rice and carried alleles for reducing Cd concentration in brown rice (BRCdC). In this study, one F₂ population (C268A/YaHui2816) was used to identify the QTLs for BRCdC in 2016, and other two different F₂ populations (Lu98A/YaHui2816 and 5406A/YaHui2816) were used to furtherly validate the QTLs in 2017. Furthermore, a pot experiment was conducted to investigate the relative expression of predicted genes in the regions of these QTLs for BRCdC. Here 4 QTLs for BRCdC were identified, among which, 2 novel QTLs (qBRCdC-9 and qBRCdC-12) were identified on chromosomes 9 and 12 in rice. The YaHui2816 alleles in the QTLs qBRCdC-9 and qBRCdC-12 could effectively reduce BRCdC under different genetic backgrounds. Importantly, the QTL qBRCdC-12 was simultaneously associated with the Cd translocation from shoot to brown rice (T-s-b), genetically explaining that the low T-s-b of the YaHui2816 resulted in its low BRCdC. The interval length of the QTL qBRCdC-12 was only narrowed to 0.28 cM, making it possible to develop molecular markers and excavate genes for reducing BRCdC. It is worth noting that genes existed in these QTL regions have not been reported for regulating the Cd translocation in rice. 6 candidate genes (OS05G0198400, OS05G0178300, OS09G0544400, OS12G0161100, OS12G0162100 and OS12G0165200) up-regulated expressed in nodeⅡof the YaHui2816 in response to Cd treatment, and encoded ZRT/IRT-like protein (ZIP) 4, the protein similar to glutathione transferase (GSTs) 16, heat shock protein Hsp20 domain containing protein, MAP kinase-like protein and Cd tolerant protein 5, respectively.

Variation in the BrHMA3 coding region controls natural variation in cadmium accumulation in Brassica rapa vegetables

Brassica rapa includes several important leafy vegetable crops with the potential for high cadmium (Cd) accumulation, posing a risk to human health. This study aims to understand the genetic basis underlying the variation in Cd accumulation among B. rapa vegetables. Cd uptake and translocation in 64 B. rapa accessions were compared. The role of the heavy metal ATPase gene BrHMA3 in the variation of Cd accumulation was investigated. BrHMA3 encodes a tonoplast-localized Cd transporter. Five full-length and four truncated haplotypes of the BrHMA3 coding sequence were identified, explaining >80% of the variation in the Cd root to shoot translocation among the 64 accessions and in F2 progeny. Truncated BrHMA3 haplotypes had a 2.3 and 9.3 times higher shoot Cd concentration and Cd translocation ratio, respectively, than full-length haplotypes. When expressed in yeast and Arabidopsis thaliana, full-length BrHMA3 showed activity consistent with a Cd transport function, whereas truncated BrHMA3 did not. Variation in the BrHMA3 promoter sequence had little effect on Cd translocation. Variation in the BrHMA3 coding sequence is a key determinant of Cd translocation to and accumulation in the leaves of B. rapa. Strong alleles of BrHMA3 can be used to breed for B. rapa vegetables that are low in Cd in their edible portions.

Cadmium accumulation, availability, and rice uptake in soils receiving long-term applications of chemical fertilizers and crop straw return

Fertilization and straw return have been widely adopted to maintain soil fertility and increase crop yields, but their long-term impacts on the accumulation and availability of cadmium (Cd) in paddy soils are still unconfirmed. Therefore, this study was undertaken in central China to investigate the accumulation, availability, and subsequent uptake of Cd by rice (Oryza sativa L.) in two adjacent field trials (P1 and P2, lasting for 10 and 12 years, respectively) under long-term straw return or in combination with chemical fertilizers. Obvious Cd accumulation, probably due to the notable Cd input from irrigation and traffic exhaust in the bulk soil (0-20 cm) of P1, was observed. The bulk soil of P2 received homogeneous straw return and chemical fertilizers, as did that of P1; however, the P2 soil almost showed Cd balance. Long-term straw return increased the portion of soil DTPA-extractable Cd to the total pool for both sites, but only P1 showed significant differences when compared to the controls. However, the highest Cd concentrations and the maximum bioconcentration factors in rice straw and grain were obtained using solo application of chemical fertilizers at both sites. Continuous additional applications of crop straw, in contrast, resulted in slightly decreased Cd uptake in rice straw, but not in grain. These findings demonstrate that neither long-term straw return nor fertilization leads directly to notable Cd accumulation, but that the promotion effects of long-term chemical fertilizer applications on Cd uptake in rice need more attention.

Enhanced tolerance of industrial hemp (Cannabis sativa L.) plants on abandoned mine land soil leads to overexpression of cannabinoids

Industrial activities have a detrimental impact on the environment and health when high concentrations of pollutants are released. Phytoremediation is a natural method of utilizing plants to remove contaminants from the soil. The goal of this study was to investigate the ability of Cannabis sativa L. to sustainably grow and remediate abandoned coal mine land soils in Pennsylvania. In this study, six different varieties of industrial hemp (Fedora 17, Felina 32, Ferimon, Futura 75, Santhica 27, and USO 31) were grown on two different contaminated soil types and two commercial soils (Miracle-Gro Potting Mix and PRO-MIX HP Mycorrhizae High Porosity Grower Mix). Plants growing in all soil types were exposed to two environmental conditions (outside and in the greenhouse). Seed germination response and plant height indicated no significant differences among all hemp varieties grown in different soils, however on an average, the height of the plants grown in the greenhouse exceeded that of the plants grown outdoors. In addition, heavy metal analysis of Arsenic, Lead, Nickel, Mercury, and Cadmium was performed. The concentration of Nickel was 2.54 times greater in the leaves of hemp grown in mine land soil outdoors when compared to greenhouse conditions. No differences were found between expression of heavy metal transporter genes. Secondary metabolite analysis of floral buds from hemp grown in mine land soil displayed a significant increase in the total Cannabidiol content (2.16%, 2.58%) when compared to Miracle-Gro control soil (1.08%, 1.6%) for outdoors and in the greenhouse, respectively. Molecular analysis using qRT-PCR indicated an 18-fold increase in the expression of the cannabidiolic acid synthase gene in plants grown on mine land soil. The data indicates a high tolerance to heavy metals as indicated from the physiological and metabolites analysis.

Cadmium accumulation and allocation in different cacao cultivars

Cadmium (Cd) is a biologically non-essential heavy metal that can cause toxic effects in plants, animals and humans already at low concentrations compared to other metals. After Cd concentrations in cacao beans of various provenances, particularly from Latin America, were found to exceed the new regulations enforced by the European Union in 2019, there is an urgent need to find measures to lower Cd accumulation in cacao beans to acceptable values. In this research, the long-term cacao cultivar trial CEDEC-JAS in northern Honduras was used to investigate differences between 11 cultivars in Cd uptake and translocation. Sampling of various plant parts, including rootstocks, scions, leaves and beans, from three replicate trees per cultivar and the soil around each tree was conducted at this site. Results indicate that concentrations of available soil Cd were more closely correlated with Cd concentrations of the rootstocks (R² = 0.56), scions (R² = 0.59) and leaves (R² = 0.46) than with bean Cd concentrations (R² = 0.26). In addition, Cd concentrations of rootstocks, scions and leaves showed close relationships to available soil Cd concentrations, with no significant differences between the cultivars. In contrast, bean Cd concentrations showed only weak correlations to available soil Cd and Cd concentrations in the vegetative plant parts, but significant variation among cultivars. Three cultivars, which were analysed in more detail, showed significant differences in Cd concentrations of mature beans, but not of immature beans. These results suggest that cultivar-related differences in bean Cd concentrations primarily result from differences in Cd loading during bean maturation, possibly due to cultivar-specific differences in the xylem-to-phloem transfer of Cd. The results show that selection of cultivars with low Cd transfer from vegetative parts into the beans has high potential to keep Cd accumulation in cacao beans at levels that are safe for consumption.

Molecular dissection of cadmium-responsive transcriptome profile in a low-cadmium-accumulating cultivar of Brassica parachinensis

Brassica parachinensis L., a daily consumed leaf vegetable, is a high-Cd accumulator that substantially threatens human health. Screening and breeding Cd pollution-safe cultivars (Cd-PSCs) of crops is a low-cost strategy to restrict human Cd intake from contaminated soils via the food chain. However, little is known about the molecular mechanisms underlying the low-Cd-accumulating traits of B. parachinensis Cd-PSCs. In the current study, we analyzed the transcriptomes of the Cd-treated (5 μM) roots and shoots of a low-Cd-accumulating cultivar (SJ19) and a high-Cd-accumulating cultivar (CX4) of B. parachinensis to reveal the molecular mechanisms in response to Cd stress. Compared to CX4, many pathways involved in carbohydrate and amino acid metabolisms were exclusively up-regulated in SJ19 roots upon exposure to low Cd concentrations, which may produce more energy and metabolites for Cd detoxification. Antioxidant enzymes in the peroxisome were up-regulated in both SJ19 and CX4 roots in response to Cd, while glutathione biosynthesis was only activated in SJ19 roots. In SJ19 shoots, pathways of photosynthesis and cell growth were activated to mitigate Cd-induced damages. Furthermore, Cd transport genes, such as MTP1, HMA3 and CAX family genes, were highly induced by Cd stress in SJ19 roots in accordance with the high Cd concentration in roots, while genes involved in root-to-shoot Cd translocation such as FRD3 and CESA3 were suppressed, which may contribute to the low Cd concertation in edible part of SJ19. Our study provides a genetic basis for further Cd-PSCs screening and breeding.

Interactive effect of drought and cadmium stress on soybean root morphology and gene expression

Recent climatic changes and low water availability due to unpredictable precipitation have reduced the productivity of soybean (Glycine max [L.] Merr.) cultivars. Limited information is available on how drought affects the accumulation and translocation of cadmium (Cd) by affecting soybean root. In this study, we investigated the effect of polyethylene glycol (PEG; 5% and 10%)-induced drought and Cd (0.2 and 0.5 mg L-1) stresses on soybean root morphology, Cd uptake and gene expression; plants not exposed to these stress (0% PEG and 0 mg L-1 Cd) served as a control. The results showed that drought affected roots morphology and Cd uptake. The reduction in root length, root area and root diameter and increase in catalase activity was less prominent in drought tolerant cultivars (Shennong20 and Liaodou32) than in drought sensitive cultivars (Liaodou3 and Liaodou10). Genes involved in abscisic acid (ABA) degradation, gibberellin and salicylic acid biosynthesis, hydrogen peroxide (H2O2) production and Cd transport were up-regulated, while those involved in zeatinriboside (ZR), indole 3-acetic acid (IAA) and methyl jasmonate (MeJA) biosynthesis were down-regulated under Cd and drought stress. Biosynthesis genes of gibberellin (Glyma03G019800.1), IAA (Glyma02G037600), ZR (XM_003550461.3) and MeJA (Glyma11G007600) were expressed to higher levels in drought tolerant cultivars than in drought sensitive cultivars. These genes represent potential candidates for the development of drought and Cd tolerant soybean cultivars.

Cross-Talk between Cadmium and Selenium at Elevated Cadmium Stress Determines the Fate of Selenium Uptake in Rice

Cadmium (Cd) is a well-known metal imposing threats to human health, and it can be accumulated in polished rice over the permitted range of 0.2 mg kg-1 (GB 2762-2017). It has been reported that selenium (Se) application decreases Cd uptake. Se-rich diets have gained attention recently, but the potential of Se-rich rice in mitigating Cd stress needs further investigation. In this study, a pot experiment in the field was conducted to assess the influence of environmental factors and exogenous split application of Se on the nutritional status of rice under Cd stress. The results indicated that the increased fertilizer treatment in soil bulk linearly increased the metal content in rice grains. Approximately 50-70% of metal was recovered in rice tissues, while 5-20% of the metal that was applied leached down into the soil. A Se concentration of 0.4 mg kg-1 could significantly improve the total Se content in grain and mitigate Cd toxicity (1 mg kg-1) below the permitted range. Panicles and roots were more active for total Se accumulation in Se-rich and non-Se-rich rice, respectively. Polishing and milling operations can significantly reduce the Cd content, as rice bran in rice tissues accumulated most of the metal's residues. The late matured rice cultivars consumed more heat units, and more metal contents were found in them. Collectively, it was found that Se can mitigate Cd toxicity, but the rice cultivation at T2 (high Cd; 2 mg kg-1 and Se; 1 mg kg-1) increased the metal uptake capability and health-risk index in polished rice, with its Se content heightened over permitted range of 0.04 to 0.30 mg kg-1 (GB/T 22499-2008). However, further molecular studies are required, in order to completely access the inverted Se accumulation behavior in rice tissues at high Cd soil stress.

Gene identification and transcriptome analysis of low cadmium accumulation rice mutant (lcd1) in response to cadmium stress using MutMap and RNA-seq

BACKGROUND

Cadmium (Cd) is a widespread toxic heavy metal pollutant in agricultural soil, and Cd accumulation in rice grains is a major intake source of Cd for Asian populations that adversely affect human health. However, the molecular mechanism underlying Cd uptake, translocation and accumulation has not been fully understood in rice plants.

RESULTS

In this study, a mutant displaying extremely low Cd accumulation (lcd1) in rice plant and grain was generated by EMS mutagenesis from indica rice cultivar 9311 seeds. The candidate SNPs associated with low Cd accumulation phenotype in the lcd1 mutant were identified by MutMap and the transcriptome changes between lcd1 and WT under Cd exposure were analyzed by RNA-seq. The lcd1 mutant had lower Cd uptake and accumulation in rice root and shoot, as well as less growth inhibition compared with WT in the presence of 5 μM Cd. Genetic analysis showed that lcd1 was a single locus recessive mutation. The SNP responsible for low Cd accumulation in the lcd1 mutant located at position 8,887,787 on chromosome 7, corresponding to the seventh exon of OsNRAMP5. This SNP led to a Pro236Leu amino acid substitution in the highly conserved region of OsNRAMP5 in the lcd1 mutant. A total of 1208 genes were differentially expressed between lcd1 and WT roots under Cd exposure, and DEGs were enriched in transmembrane transport process GO term. Increased OsHMA3 expression probably adds to the effect of OsNRAMP5 mutation to account for the significant decreases in Cd accumulation in rice plant and grain of the lcd1 mutant.

CONCLUSIONS

An extremely low Cd mutant lcd1 was isolated and identified using MutMap and RNA-seq. A Pro236Leu amino acid substitution in the highly conserved region of OsNRAMP5 is likely responsible for low Cd accumulation in the lcd1 mutant. This work provides more insight into the mechanism of Cd uptake and accumulation in rice, and will be helpful for developing low Cd accumulation rice by marker-assisted breeding.

Heavy metal distribution, translocation, and human health risk assessment in the soil-rice system around Dongting Lake area, China

Heavy metals including copper (Cu), zinc (Zn), cadmium (Cd), chromium (Cr), lead (Pb), and arsenic (As) were investigated in 89 pairs of rice plant and paddy soils around Dongting Lake area, China. Rice plants and soils were collected with GPS device, and heavy metal contents in different rice plant tissues and soils were measured. The aim of the present study was to assess the heavy metal pollution and translocation in the whole soil-rice system, including the consequent human health risk for residents. According to the indices of average geoaccumulation (I_geo) of the studied elements, paddy soils in study area were moderately polluted by Cd, lowly polluted by Pb, and not polluted by Cu, Zn, Cr, and As. Considering the much higher concentrations of studied elements in roots than in other tissues of rice plants, a great mass of these elements was assumed to be confined in the roots. The low translocation factors from root to shoot (Tf_root-shoot) of all the studied heavy metals (0.04-0.74) underpinned this. The high translocation factors from soil to root (Tf_soil-root) of Cd (9.12), As (4.38), and Zn (2.05) indicated the high bioavailability of these heavy metals for rice plant. The health risk assessment using target hazard quotients (THQs) model indicated that Cd (5.17 for adults and 4.49 for children respectively) and As (3.61 for adults and 3.14 for children respectively) could cause human health risk both for adults and children. Further, given the rate of individual THQ values exceeding one, Cu might also be considered as a potential human health dangerous element in the study area. It was worth noting that as one of the main pollutants, Pb did not show human health risk through rice grain consumption due to its low Tf values in soil-rice system. However, the risk identification of As using comparisons of measured concentrations with risk screening value in Chinese paddy soil standard (GB15618-2018) was not consistent with the human health risk assessment result. This might indicate that site-specific risk screening values of As in China is in demand.

Map-based cloning of a new total loss-of-function allele of OsHMA3 causes high cadmium accumulation in rice grain

Rice (Oryza sativa) is a major dietary source of the toxic metal cadmium (Cd). Reducing Cd transfer from soil to the rice grain is important for food safety. Rice cultivars vary widely in their Cd accumulation, but the genetic basis for this variation is not fully understood. Based on field and pot experiments comparing 26 rice cultivars, we identified a cultivar with high Cd accumulation in grain (BG367, coded as W4) and a cultivar with low grain Cd accumulation (Huajingxian 74, coded as W0). W4 showed a higher Cd translocation from roots to shoots than W0. Using chromosome single segment substitution lines derived from the two cultivars, we mapped a quantitative trait locus for Cd accumulation in grain to a 400 kb region in chromosome 7. Using yeast expression assays and transgenic complementation, we identified OsHMA3 as the causal gene at this locus. Compared with OsHMA3W0, OsHMA3W4 has a deletion of 14 amino acids predicted to be in the ATP binding domain. OsHMA3W4 showed a complete loss of transport activity for Cd in yeast assays. Taking our findings together, we have identified a new allele of OsHMA3 with a total loss-of-function, resulting in greatly elevated Cd translocation to rice shoots and grain.

The R2R3-MYB Transcription Factor MYB49 Regulates Cadmium Accumulation

Abscisic acid (ABA) reduces accumulation of potentially toxic cadmium (Cd) in plants. How the ABA signal is transmitted to modulate Cd uptake remains largely unclear. Here, we report that the basic region/Leu zipper transcription factor ABSCISIC ACID-INSENSITIVE5 (ABI5), a central ABA signaling molecule, is involved in ABA-repressed Cd accumulation in plants by physically interacting with a previously uncharacterized R2R3-type MYB transcription factor, MYB49. Overexpression of the Cd-induced MYB49 gene in Arabidopsis (Arabidopsis thaliana) resulted in a significant increase in Cd accumulation, whereas myb49 knockout plants and plants expressing chimeric repressors of MYB49:ERF-associated amphiphilic repression motif repression domain (SRDX49) exhibited reduced accumulation of Cd. Further investigations revealed that MYB49 positively regulates the expression of the basic helix-loop-helix transcription factors bHLH38 and bHLH101 by directly binding to their promoters, leading to activation of IRON-REGULATED TRANSPORTER1, which encodes a metal transporter involved in Cd uptake. MYB49 also binds to the promoter regions of the heavy metal-associated isoprenylated plant proteins (HIPP22) and HIPP44, resulting in up-regulation of their expression and subsequent Cd accumulation. On the other hand, as a feedback mechanism to control Cd uptake and accumulation in plant cells, Cd-induced ABA up-regulates the expression of ABI5, whose protein product interacts with MYB49 and prevents its binding to the promoters of downstream genes, thereby reducing Cd accumulation. Our results provide new insights into the molecular feedback mechanisms underlying ABA signaling-controlled Cd uptake and accumulation in plants.

Immobilization of cadmium and improvement of bacterial community in contaminated soil following a continuous amendment with lime mixed with fertilizers: A four-season field experiment

The effects of the continuous amendments with lime (L), lime mixed with organic manure (LO), or phosphate fertilizer (LP) on the soil bacterial community, soil available cadmium (Cd) content, and Cd accumulation in rice planted in a Cd contaminated paddy soil were determined through a four-season field experiment. The results showed that with continuous application of amendments during the four seasons, the soil pH increased significantly compared with the control, while the soil available Cd content significantly decreased by 12.9-18.2%, 13.1-17.3% and 0.09-23.2% under the L, LO, or LP treatments, and the Cd content of rice was significantly reduced by 28.5-56.2%, 37.6-53.4%, and 31.2-44.6%, respectively. The rice Cd content in each season at amendment treatments was lower than the National Food Safety Standard of China (maximum level of Cd in grains is 0.2 mg/kg). The diversity and richness of soil bacteria significantly increased after the continuous amendments in soil for four-season cropping. Soil pH and available Cd content were important factors for soil bacterial community. Lime mixed with phosphate fertilizer or organic manure had been characterized by a significant increase of Proteobacteria, Nitrospirae, and Chloroflexi and a decrease of Acidobacteria based on an Illumina Miseq sequencing analysis. The results indicate that the continuous application of lime mixed with organic manure or phosphate fertilizer is a very important measure to ensure the quality safety of rice and improve soil quality in a Cd-contaminated paddy.

Ectopic expression of a bacterial mercury transporter MerC in root epidermis for efficient mercury accumulation in shoots of Arabidopsis plants

For mercury phytoextraction, we previously demonstrated in Arabidopsis thaliana that a constitutive and ubiquitous promoter-driven expression of a bacterial mercury transporter MerC fused with SYP121, a plant SNARE for plasma membrane protein trafficking increases plant mercury accumulation. To advance regulation of ectopic expression of the bacterial transporter in the plant system, the present study examined whether merC-SYP121 expression driven by a root epidermis specific promoter (pEpi) is sufficient to enhance mercury accumulation in plant tissues. We generated five independent transgenic Arabidopsis plant lines (hereafter pEpi lines) expressing a transgene encoding MerC-SYP121 N-terminally tagged with a fluorescent protein mTRQ2 under the control of pEpi, a root epidermal promoter. Confocal microscopy analysis of the pEpi lines showed that mTRQ2-MerC-SYP121 was preferentially expressed in lateral root cap in the root meristematic zone and epidermal cells in the elongation zone of the roots. Mercury accumulation in shoots of the pEpi lines exposed to inorganic mercury was overall higher than the wild-type and comparable to the over-expressing line. The results suggest that cell-type specific expression of the bacterial transporter MerC in plant roots sufficiently enhances mercury accumulation in shoots, which could be a useful phenotype for improving efficiency of mercury phytoremediation.

Cd induced generation of free radical species in Brassica juncea is regulated by supplementation of earthworms in the drilosphere

The antioxidant defense system of Brassica juncea under Cd stress was examined on supplementation of earthworms in the rhizosphere at different concentrations of Cd (0.50, 0.75, 1.00 and 1.25 mM i.e. 56, 84, 112 and 140 mg kg^-1 respectively). Seedlings were raised in small pots containing soil spiked with Cd and earthworms under controlled conditions for 15 days. Improved Cd accumulation, as well as enhanced plant dry weight and metal tolerance were observed following the addition of earthworms. Earthworm supplementation reduced reactive oxygen species (ROS) generation by 7.3% for hydrogen peroxide (H₂O₂), 7.1% for superoxide anion (O₂^-), and 8.4% for malondialdehyde (MDA) in plants treated with 1.25 mM (140 mg kg^-1) Cd. Confocal microscopy revealed improved cell viability and reduced H₂O₂ content due to enhanced antioxidative activity. Activity and expression levels of genes coding for antioxidative enzymes (superoxide dismutase; SOD, catalase; CAT, guaicol peroxidase; POD, glutathione reductase; GR, and glutathione-S-transferase; GST) were higher in plants raised in soils inoculated with earthworms, with expression of SOD increasing by 58.8%, CAT by 75%, POD by 183%, GR by 106.6%, and GST by 11.8%. Moreover, plant pigment (chlorophyll a, chlorophyll b, total chlorophyll, and carotenoids) concentrations increased by 8%, 9.1%, 9.1%, and 7.7% respectively, in plants grown in soils supplemented with earthworms. The results of our study suggest that the addition of earthworms to soil increases antioxidative enzyme activities, gene expression in plants, and ROS inhibition, which enhances tolerance to Cd during the phytoextraction process.

Genetic analysis of cadmium accumulation in lettuce (Lactuca sativa)

This work characterized mechanisms controlling cadmium (Cd) tolerance and accumulation in lettuce at both the physiological and genetic levels. These traits were evaluated in 18 Lactuca accessions representing a large genetic diversity. Cd tolerance and accumulation in roots and shoots as well as Cd translocation from roots to the shoot varied independently, and with a significant range of variation. Analyses of F1 progenies of crosses between cultivars with contrasted phenotypes showed that high tolerance to Cd, low Cd accumulation and low Cd root-shoot translocation were recessive traits. Results of analyses of F2 progenies of different crosses suggest that root Cd concentration and root-shoot Cd translocation were under a complex genetic determinism involving at least two loci. This work thus revealed that limiting both Cd accumulation and Cd root-shoot translocation in lettuce is possible and depends on recessive loci. Differences in the ability to accumulate Cd in roots in the long term could not be linked to differences in short-term 109Cd uptake into, or efflux from, roots. In contrast, the cultivar with the highest root-shoot Cd translocation was the same in the long term and in the short term, which suggests that this trait relies on processes that are implemented quickly (i.e. in less than three days) after the start of Cd exposure.

Cadmium in rice grains from a field trial in relation to model parameters of Cd-toxicity and -absorption in rice seedlings

Selecting rice varieties that absorb less Cd from soil will reduce human health risks posed by Cd through rice consumption. Nine rice cultivars that are commonly grown in Taiwan were used for investigating genotypic differences in Cd tolerance and absorption. Hydroponic testing with Cd treatments of 5, 10, and 50 μM CdCl₂ for 7-day exposure was conducted for the cultivars. The reductions in plant growth by Cd treatments were fitted to a dose-response curve; the modeling parameters, that is, the effective Cd concentration resulting in 50% reduction (EC₅₀), were obtained. The Cd concentrations in plant were expressed by a Michaelis-Menten kinetic model and the uptake rate parameters (M/k) were obtained. A field experiment was also conducted in farmland with Cd ~0.2 mg kg^-1 in soil. For the rice cultivars used in hydroponics, Cd distributions and physiological traits (CAT, H₂O₂, and MDA) in seedlings were related to their tolerances to Cd toxicity. Modeling parameters, EC₅₀ and M/k, correspond to the Cd concentrations in rice plant. In the field experiment, the Cd concentrations in brown rice of the indica cultivars (i.e., TCS10, TCS17, and TNGS22) were 0.6 mg kg^-1; these were significantly higher than those of the japonica cultivars (i.e. TY3, TK9, TNG71, KH145, TKW1, and TKW3). By contrast, the three cultivars, KH145, TKW1, and TKW3, whose Cd concentrations in brown rice were lower than 0.3 mg kg^-1 were considered safe relative to the permissible level of 0.4 mg kg^-1. In addition, for the used cultivars, Cd concentrations in brown rice were well expressed (i.e., r² = 0.95) as a function of EC₅₀, M/k, and MDA by using multiple regression. Newly bred cultivars could be screened rapidly with hydroponic testing to predict their Cd concentrations in brown rice when grown in the field.

Effectiveness of simultaneous foliar application of Zn and Mn or P to reduce Cd concentration in rice grains: a field study

Excess cadmium (Cd) in agricultural soils can be taken up by rice plants and concentrated in the grain, presenting a human health risk. In this study, we field tested the effects of three foliar treatments (zinc (Zn) alone, or combined with manganese (ZnMn) or phosphorus (ZnP)) on the Cd concentration and grain yield of six rice cultivars (C Liangyou 7, Fengyuanyou 272, Xiangwanxian 12, Tianyouhuazhan, Xiangwanxian 13, and Jinyou 284) at the grain filling stage. Our results showed that rice yield and Cd, Zn, Mn, P, and K concentrations were significantly different among the cultivars (p < 0.05); for example, Jinyou 284 recorded lower Cd levels than any other cultivar. Application of Zn, ZnMn, and ZnP had no significant effect on rice yield and Mn, P, and K concentrations for all cultivars. Compared with the control, Cd concentrations after treatment with Zn, ZnMn, and ZnP decreased by 19.03-32.55%, 36.63-55.78% (p < 0.05), and 25.72-49.10%, respectively, while Zn concentrations increased by 11.02-29.38%, 10.63-32.67%, and 11.97-36.82%, respectively. There was a significant negative correlation between Cd and Zn concentrations (p < 0.01). All three treatments increased Zn and reduced Cd concentration in rice grains, though ZnMn was most effective. Therefore, cultivar selection and Zn fertilizer application are effective strategies to minimize Cd concentration in rice grains. However, the lowest result still exceeded the Chinese Cd safety limit (0.2 mg Cd kg^-1) by a factor of 2.6, demonstrating that additional effective measures should be simultaneously used to further reduce the accumulation of Cd in rice grains.

Biochar reduces cadmium accumulation in rice grains in a tungsten mining area-field experiment: effects of biochar type and dosage, rice variety, and pollution level

Cadmium (Cd)-contaminated rice (Oryza sativa) in Southern China is a great threat to food security, and the paddy soil remediation is urgently needed to reduce Cd accumulation in rice. Application of biochar could effectively immobilize soil Cd and reduce Cd uptake by rice. Fields that were applied with soil treatments including control and 15 and 30 t ha^-1 each hickory nut shell-derived biochar (KC) or maize straw-derived biochar (MC), and grown with two rice varieties (hybrid rice and late japonica rice) were selected for this study. The long-term effect of biochars on decreasing Cd bioavailability in paddy soils was evaluated. The results showed when MC was applied at 15 t ha^-1, DTPA-Cd (soil cadmium extracted by diethylenetriamine pentaacetic acid) was reduced by 20.0 and 34.5% in Field A (slightly Cd pollution) and B (moderately Cd pollution), respectively. In Field B, soil DTPA-Cd concentrations with application of 30 t ha^-1 biochars were all lower than that of 15 t ha^-1 biochar, but there were no significant differences between the two types of biochars. Cd concentration in rice grains and straws of hybrid rice are two times more than those of late japonica rice. Cd bio-concentration factor both of grains and straw was significantly increased by biochar application, which in Field A was higher than that in Field B. Our results suggest that biochars reduce Cd accumulation in rice grains by immobilizing soil Cd. KC has a higher potential in lowering Cd bioavailability than MC. Hybrid rice should be prohibited to cultivate in these areas.