1
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Namioka R, Suzuki M, Yoshida S. Synthesis of 1,2,3-triazoles using Grignard reactions through the protection of azides. Front Chem 2023; 11:1237878. [PMID: 37583567 PMCID: PMC10424848 DOI: 10.3389/fchem.2023.1237878] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2023] [Accepted: 07/17/2023] [Indexed: 08/17/2023] Open
Abstract
An efficient method to prepare organomagnesium intermediates having a protected azido group is reported. Protection of azido groups with di-(tert-butyl)(4-(dimethylamino)phenylphosphine (amphos) and following iodine-magnesium exchange realized the preparation of organomagnesium intermediates, which served in the synthesis of diverse azides by transformation with various electrophiles followed by deprotection with elemental sulfur. Furthermore, click reactions of azides with alkynes enabled synthesizing a wide variety of 1,2,3-triazoles.
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Affiliation(s)
- Rina Namioka
- Department of Biological Science and Technology, Faculty of Advanced Engineering, Tokyo University of Science, Tokyo, Japan
| | - Minori Suzuki
- Department of Biological Science and Technology, Faculty of Advanced Engineering, Tokyo University of Science, Tokyo, Japan
- Laboratory of Chemical Bioscience, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental University (TMDU), Tokyo, Japan
| | - Suguru Yoshida
- Department of Biological Science and Technology, Faculty of Advanced Engineering, Tokyo University of Science, Tokyo, Japan
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2
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Sondag D, Maartense L, de Jong H, de Kleijne FFJ, Bonger KM, Löwik DWPM, Boltje TJ, Dommerholt J, White PB, Blanco-Ania D, Rutjes FPJT. Readily Accessible Strained Difunctionalized trans-Cyclooctenes with Fast Click and Release Capabilities. Chemistry 2023; 29:e202203375. [PMID: 36478614 PMCID: PMC10107714 DOI: 10.1002/chem.202203375] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Indexed: 12/12/2022]
Abstract
The click reaction between a functionalized trans-cyclooctene (TCO) and a tetrazine (Tz) is a compelling method for bioorthogonal conjugation in combination with payload releasing capabilities. However, the synthesis of difunctionalized TCOs remains challenging. As a result, these compounds are poorly accessible, which impedes the development of novel applications. In this work, the scalable and accessible synthesis of a new bioorthogonal difunctionalized TCO is reported in only four single selective high yielding steps starting from commercially available compounds. The TCO-Tz click reaction was assessed and revealed excellent kinetic rates and subsequently payload release was shown with various functionalized derivatives. Tetrazine triggered release of carbonate and carbamate payloads was demonstrated up to 100 % release efficiency and local drug release was shown in a cellular toxicity study which revealed a >20-fold increase in cytotoxicity.
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Affiliation(s)
- Daan Sondag
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
| | - Luuk Maartense
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
| | - Heleen de Jong
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
| | - Frank F J de Kleijne
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
| | - Kimberly M Bonger
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
| | - Dennis W P M Löwik
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
| | - Thomas J Boltje
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
| | - Jan Dommerholt
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
| | - Paul B White
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
| | - Daniel Blanco-Ania
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
| | - Floris P J T Rutjes
- Institute for Molecules and Materials, Radboud University, 6525 AJ, Nijmegen, Netherlands
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3
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Mitry MMA, Greco F, Osborn HMI. In Vivo Applications of Bioorthogonal Reactions: Chemistry and Targeting Mechanisms. Chemistry 2023; 29:e202203942. [PMID: 36656616 DOI: 10.1002/chem.202203942] [Citation(s) in RCA: 19] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Revised: 01/17/2023] [Accepted: 01/18/2023] [Indexed: 01/20/2023]
Abstract
Bioorthogonal chemistry involves selective biocompatible reactions between functional groups that are not normally present in biology. It has been used to probe biomolecules in living systems, and has advanced biomedical strategies such as diagnostics and therapeutics. In this review, the challenges and opportunities encountered when translating in vitro bioorthogonal approaches to in vivo settings are presented, with a focus on methods to deliver the bioorthogonal reaction components. These methods include metabolic bioengineering, active targeting, passive targeting, and simultaneously used strategies. The suitability of bioorthogonal ligation reactions and bond cleavage reactions for in vivo applications is critically appraised, and practical considerations such as the optimum scheduling regimen in pretargeting approaches are discussed. Finally, we present our own perspectives for this area and identify what, in our view, are the key challenges that must be overcome to maximise the impact of these approaches.
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Affiliation(s)
- Madonna M A Mitry
- Reading School of Pharmacy, University of Reading Whiteknights, Reading, RG6 6AD, UK.,Department of Pharmaceutical Chemistry Faculty of Pharmacy, Ain Shams University, Cairo, 11566, Egypt
| | - Francesca Greco
- Reading School of Pharmacy, University of Reading Whiteknights, Reading, RG6 6AD, UK
| | - Helen M I Osborn
- Reading School of Pharmacy, University of Reading Whiteknights, Reading, RG6 6AD, UK
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4
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Chinoy ZS, Friscourt F. Expanding the Strain‐Promoted 1,3‐Dipolar Cycloaddition Arsenal for a More Selective Bioorthogonal Labeling in Living Cells. Isr J Chem 2022. [DOI: 10.1002/ijch.202200055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Zoeisha S. Chinoy
- Institut Européen de Chimie et Biologie Université de Bordeaux 2 rue Robert Escarpit 33607 Pessac France
- Institut des Sciences Moléculaires CNRS UMR5255 33405 Talence France
| | - Frédéric Friscourt
- Institut Européen de Chimie et Biologie Université de Bordeaux 2 rue Robert Escarpit 33607 Pessac France
- Institut des Sciences Moléculaires CNRS UMR5255 33405 Talence France
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5
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Brauer J, Mötzing M, Gröst C, Hoffmann R, Berg T. Templated Generation of a Bcl-x L Inhibitor by Isomer-Free SPAAC Based on Azacyclonon-5-yne. Chemistry 2022; 28:e202202259. [PMID: 35989238 PMCID: PMC9827882 DOI: 10.1002/chem.202202259] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Indexed: 01/12/2023]
Abstract
High-affinity inhibitors of large protein-protein interactions often have a high molecular weight, which compromises their cell permeability and oral bioavailability. We recently presented isomer-free, strain-promoted azide-alkyne cycloaddition (iSPAAC) as a method by which to generate large, chemically uniform bioactive molecules inside living cells from two smaller components with higher cell permeability. Here, we present the synthesis of Fmoc-protected azacyclonon-5-yne (Fmoc-ACN) as the first cyclononyne suitable for iSPAAC. ACN facilitated the structure-guided development of a single-digit micromolar triazole inhibitor of the protein-protein interaction domain of the antiapoptotic protein Bcl-xL . Inhibitor formation in aqueous buffer at 37 °C, templated by the target protein Bcl-xL , proceeded 2800 times faster than the reaction between Fmoc-ACN and benzyl azide under standard conditions in acetonitrile. Our data demonstrate the utility of cyclononynes for iSPAAC and their potential for achieving vastly accelerated templated reactions in aqueous environments.
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Affiliation(s)
- Juliane Brauer
- Institute of Organic ChemistryLeipzig UniversityJohannisallee 2904103LeipzigGermany
| | - Marina Mötzing
- Institute of Bioanalytical Chemistry andCenter for Biotechnology and BiomedicineLeipzig UniversityDeutscher Platz 504103LeipzigGermany
| | - Corinna Gröst
- Institute of Organic ChemistryLeipzig UniversityJohannisallee 2904103LeipzigGermany
| | - Ralf Hoffmann
- Institute of Bioanalytical Chemistry andCenter for Biotechnology and BiomedicineLeipzig UniversityDeutscher Platz 504103LeipzigGermany
| | - Thorsten Berg
- Institute of Organic ChemistryLeipzig UniversityJohannisallee 2904103LeipzigGermany
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6
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Shen X, Zhang C, Lan F, Su Z, Zheng Y, Zheng T, Xiong Q, Xie X, Du G, Zhao X, Hu C, Deng P, Yu Z. Dibenzo[
b
,
f
][1,4,5]chalcogenadiazepine Photoswitches: Conversion of Excitation Energy into Ring Strain. Angew Chem Int Ed Engl 2022; 61:e202209441. [DOI: 10.1002/anie.202209441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Indexed: 11/07/2022]
Affiliation(s)
- Xin Shen
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Cefei Zhang
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Fengying Lan
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Zhishan Su
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Yuanqin Zheng
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Tingting Zheng
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Qin Xiong
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Xinyu Xie
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Guangxi Du
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Xiaohu Zhao
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Changwei Hu
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Pengchi Deng
- Analytical & Testing Center Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
| | - Zhipeng Yu
- Key Laboratory of Green Chemistry & Technology of Ministry of Education College of Chemistry Sichuan University 29 Wangjiang Road Chengdu 610064 P. R. China
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7
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Beutick SE, Vermeeren P, Hamlin TA. The 1,3-Dipolar Cycloaddition: From Conception to Quantum Chemical Design. Chem Asian J 2022; 17:e202200553. [PMID: 35822651 PMCID: PMC9539489 DOI: 10.1002/asia.202200553] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Revised: 07/08/2022] [Indexed: 11/12/2022]
Abstract
The 1,3-dipolar cycloaddition (1,3-DCA) reaction, conceptualized by Rolf Huisgen in 1960, has proven immensely useful in organic, material, and biological chemistry. The uncatalyzed, thermal transformation is generally sluggish and unselective, but the reactivity can be enhanced by means of metal catalysis or by the introduction of either predistortion or electronic tuning of the dipolarophile. These promoted reactions generally go with a much higher reactivity, selectivity, and yields, often at ambient temperatures. The rapid orthogonal reactivity and compatibility with aqueous and physiological conditions positions the 1,3-DCA as an excellent bioorthogonal reaction. Quantum chemical calculations have been critical for providing an understanding of the physical factors that control the reactivity and selectivity of 1,3-DCAs. In silico derived design principles have proven invaluable for the design of new dipolarophiles with tailored reactivity. This review discusses everything from the conception of the 1,3-DCA all the way to the state-of-the-art methods and models used for the quantum chemical design of novel (bioorthogonal) reagents.
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Affiliation(s)
- Steven E. Beutick
- Department of Theoretical ChemistryAmsterdam Institute of Molecular and Life Sciences (AIMMS)Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
| | - Pascal Vermeeren
- Department of Theoretical ChemistryAmsterdam Institute of Molecular and Life Sciences (AIMMS)Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
| | - Trevor A. Hamlin
- Department of Theoretical ChemistryAmsterdam Institute of Molecular and Life Sciences (AIMMS)Amsterdam Center for Multiscale Modeling (ACMM)Vrije Universiteit AmsterdamDe Boelelaan 10831081 HVAmsterdamThe Netherlands
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8
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Shen X, Zhang C, Lan F, Su Z, Zheng Y, Zheng T, Xiong Q, Xie X, Du G, Zhao X, Hu C, Deng P, Yu Z. Dibenzo[b,f][1,4,5]chalcogenadiazepine Photoswitches: Conversion of Excitation Energy into Ring Strain. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202209441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Xin Shen
- Sichuan University Department of Chemistry 610000 Chengdu CHINA
| | - Cefei Zhang
- Sichuan University College of Chemistry CHINA
| | - Fengying Lan
- Sichuan University Department of Chemistry CHINA
| | - Zhishan Su
- Sichuan University College of Chemistry CHINA
| | | | | | - Qin Xiong
- Sichuan University Department of Chemistry CHINA
| | - Xinyu Xie
- Sichuan University Department of Chemistry CHINA
| | - Guangxi Du
- Sichuan University Department of Chemistry CHINA
| | - Xiaohu Zhao
- Sichuan University Department of Chemistry CHINA
| | - Changwei Hu
- Sichuan University College of Chemistry CHINA
| | - Pengchi Deng
- Sichuan University Analytical & Testing Center CHINA
| | - Zhipeng Yu
- Sichuan University - Wangjiang Campus: Sichuan University College of Chemistry College of Chemistry29 Wangjianglu, Jiuyanqiao 610064 Chengdu CHINA
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9
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Fitzgerald S, O'Shea DF. Continuous Flow Bioconjugations of NIR‐AZA Fluorophores via Strained Alkyne Cycloadditions with Intra‐Chip Fluorogenic Monitoring**. Chemistry 2022; 28:e202104111. [PMID: 34979050 PMCID: PMC9305252 DOI: 10.1002/chem.202104111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Indexed: 11/17/2022]
Abstract
The importance of bioconjugation reactions continues to grow for cell specific targeting and dual therapeutic plus diagnostic medical applications. This necessitates the development of new bioconjugation chemistries, in‐flow synthetic and analytical methods. With this goal, continuous flow bioconjugations were readily achieved with short residence times for strained alkyne substituted carbohydrate and therapeutic peptide biomolecules in reaction with azide and tetrazine substituted fluorophores. The strained alkyne substrates included substituted 2‐amino‐2‐deoxy‐α‐D‐glucopyranose, and the linear and cyclic peptide sequences QIRQQPRDPPTETLELEVSPDPAS‐OH and c(RGDfK) respectively. The catalyst and reagent‐free inverse electron demand tetrazine cycloadditions proved more favourable than the azide 1,3‐dipolar cycloadditions. Reaction completion was achieved with residence times of 5 min at 40 °C for tetrazine versus 10 min at 80 °C for azide cycloadditions. The use of a fluorogenic tetrazine fluorophore, in a glass channelled reactor chip, allowed for intra‐chip reaction monitoring by recording fluorescence intensities at various positions throughout the chip. As the Diels‐Alder reactions proceeded through the chip, the fluorescence intensity increased accordingly in real‐time. The application of continuous flow fluorogenic bioconjugations could offer an efficient translational access to theranostic agents.
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Affiliation(s)
| | - Donal F. O'Shea
- Chemistry Department, RCSI 123 St. Stephen's Green Dublin 2 Ireland
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10
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Krell K, Pfeuffer B, Rönicke F, Chinoy ZS, Favre C, Friscourt F, Wagenknecht H. Fast and Efficient Postsynthetic DNA Labeling in Cells by Means of Strain-Promoted Sydnone-Alkyne Cycloadditions. Chemistry 2021; 27:16093-16097. [PMID: 34633713 PMCID: PMC9297951 DOI: 10.1002/chem.202103026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Indexed: 12/16/2022]
Abstract
Sydnones are highly stable mesoionic 1,3-dipoles that react with cyclooctynes through strain-promoted sydnone-alkyne cycloaddition (SPSAC). Although sydnones have been shown to be valuable bioorthogonal chemical reporters for the labeling of proteins and complex glycans, nucleic acids have not yet been tagged by SPSAC. Evaluation of SPSAC kinetics with model substrates showed fast reactions with cyclooctyne probes (up to k=0.59 M-1 s-1 ), and two different sydnones were effectively incorporated into both 2'-deoxyuridines at position 5, and 7-deaza-2'-deoxyadenosines at position 7. These modified nucleosides were synthetically incorporated into single-stranded DNAs, which were successfully postsynthetically labeled with cyclooctyne probes both in vitro and in cells. These results show that sydnones are versatile bioorthogonal tags and have the premise to become essential tools for tracking DNA and potentially RNA in living cells.
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Affiliation(s)
- Katja Krell
- Institute of Organic ChemistryKarlsruhe Institute of Technology (KIT)Fritz-Haber-Weg 676131KarlsruheGermany
| | - Bastian Pfeuffer
- Institute of Organic ChemistryKarlsruhe Institute of Technology (KIT)Fritz-Haber-Weg 676131KarlsruheGermany
| | - Franziska Rönicke
- Institute of Organic ChemistryKarlsruhe Institute of Technology (KIT)Fritz-Haber-Weg 676131KarlsruheGermany
| | - Zoeisha S. Chinoy
- Institut Européen de Chimie et Biologie and ISM CNRS UMR5255Université de Bordeaux2 Rue Robert Escarpit33607PessacFrance
| | - Camille Favre
- Institut Européen de Chimie et Biologie and ISM CNRS UMR5255Université de Bordeaux2 Rue Robert Escarpit33607PessacFrance
| | - Frédéric Friscourt
- Institut Européen de Chimie et Biologie and ISM CNRS UMR5255Université de Bordeaux2 Rue Robert Escarpit33607PessacFrance
| | - Hans‐Achim Wagenknecht
- Institute of Organic ChemistryKarlsruhe Institute of Technology (KIT)Fritz-Haber-Weg 676131KarlsruheGermany
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11
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Ruffell K, Smith FR, Green MT, Nicolle SM, Inman M, Lewis W, Hayes CJ, Moody CJ. Diazophosphonates: Effective Surrogates for Diazoalkanes in Pyrazole Synthesis. Chemistry 2021; 27:13703-13708. [PMID: 34425034 DOI: 10.1002/chem.202101788] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2021] [Indexed: 01/04/2023]
Abstract
Diazophosphonates, readily prepared from α-ketophosphonates by oxidation of the corresponding hydrazones in batch or in flow, are useful partners in 1,3-dipolar cycloaddition reactions to alkynes to give N-H pyrazoles, including the first intramolecular examples of such a process. The phosphoryl group imbues a number of desirable properties into the diazo 1,3-dipole. The electron-withdrawing nature of the phosphoryl stabilizes the diazo compound making it easier to handle, whilst the ability of the phosphoryl group to migrate readily in a [1,5]-sigmatropic rearrangement enables its transfer from C to N to aromatize the initial cycloadduct, and hence its facile removal from the final pyrazole product. Overall, the diazophosphonate acts as a surrogate for the much less stable diazoalkane in cycloadditions, with the phosphoryl group playing a vital, but traceless, role. The cycloaddition proceeds more readily with alkynes bearing electron-withdrawing groups, and is regiospecific with asymmetrical alkynes. The potential of diazophosphonates for use in bioorthogonal cycloadditions is demonstrated by their facile addition to strained alkynes.
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Affiliation(s)
- Katie Ruffell
- School of Chemistry, University of Nottingham University Park, Nottingham, NG7 2RD, U.K
| | - Frances R Smith
- School of Chemistry, University of Nottingham University Park, Nottingham, NG7 2RD, U.K
| | - Michael T Green
- School of Chemistry, University of Nottingham University Park, Nottingham, NG7 2RD, U.K
| | - Simon M Nicolle
- School of Chemistry, University of Nottingham University Park, Nottingham, NG7 2RD, U.K
| | - Martyn Inman
- School of Chemistry, University of Nottingham University Park, Nottingham, NG7 2RD, U.K
| | - William Lewis
- School of Chemistry, University of Nottingham University Park, Nottingham, NG7 2RD, U.K
| | - Christopher J Hayes
- School of Chemistry, University of Nottingham University Park, Nottingham, NG7 2RD, U.K
| | - Christopher J Moody
- School of Chemistry, University of Nottingham University Park, Nottingham, NG7 2RD, U.K
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12
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Kang D, Cheung ST, Kim J. Bioorthogonal Hydroamination of Push-Pull-Activated Linear Alkynes. Angew Chem Int Ed Engl 2021; 60:16947-16952. [PMID: 34019705 DOI: 10.1002/anie.202104863] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Revised: 05/16/2021] [Indexed: 01/14/2023]
Abstract
A bioorthogonal reaction between N,N-dialkylhydroxylamines and push-pull-activated halogenated alkynes is described. We explore the use of rehybridization effects in activating alkynes, and we show that electronic effects, when competing stereoelectronic and inductive factors are properly balanced, sufficiently activate a linear alkyne in the uncatalyzed conjugative retro-Cope elimination reaction while adequately protecting it against cellular nucleophiles. This design preserves the low steric profile of an alkyne and pairs it with a comparably unobtrusive hydroxylamine. The kinetics are on par with those of the fastest strain-promoted azide-alkyne cycloaddition reactions, the products regioselectively formed, the components sufficiently stable and easily installed, and the reaction suitable for cellular labeling.
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Affiliation(s)
- Dahye Kang
- Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, 02215, USA.,Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, 02115, USA
| | - Sheldon T Cheung
- Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, 02215, USA.,Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, 02115, USA
| | - Justin Kim
- Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, 02215, USA.,Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA, 02115, USA
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13
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Hu Y, Schomaker JM. Recent Developments and Strategies for Mutually Orthogonal Bioorthogonal Reactions. Chembiochem 2021; 22:3254-3262. [PMID: 34261195 DOI: 10.1002/cbic.202100164] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Revised: 07/12/2021] [Indexed: 12/23/2022]
Abstract
Over the past decade, several different metal-free bioorthogonal reactions have been developed to enable simultaneous double-click labeling with minimal-to-no competing cross-reactivities; such transformations are termed 'mutually orthogonal'. More recently, several examples of successful triple ligation strategies have also been described. In this minireview, we discuss selected aspects of the development of orthogonal bioorthogonal reactions over the past decade, including general strategies to drive future innovations to achieve simultaneous, mutually orthogonal click reactions in one pot.
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Affiliation(s)
- Yun Hu
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, WI, 53706, USA
| | - Jennifer M Schomaker
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, WI, 53706, USA
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14
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Wu X, Deng J, Guo G, Zheng Y, Xiong Q, Zheng T, Zhao X, Yu Z. Spatiotemporal Resolved Live Cell Membrane Tracking through Photo-click Reactions Enriched in Lipid Phase. Chemistry 2021; 27:11957-11965. [PMID: 34057766 DOI: 10.1002/chem.202101653] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Indexed: 01/04/2023]
Abstract
A set of photo-switchable monopeptides derived from cis-β-dibenzodiazocine-l-alanine (cis-DBDAA) have been designed and synthesized, which are capable of photo-click reacting with diaryltetrazoles or diarylsydnones in a hydrophobic phospholipid bilayer environment. The DBDAA monopeptides include both a hydrophobic tail on C-terminal, providing high affinity toward lipid membrane, and a modularized functional moiety on N-terminal, enabling rapid optimization of the self-assembly strength to form multifunctional supramolecules. With the cis-DBDAA monopeptides photo-switched into trans-configuration, we were able to disrupt the supramolecular assembly through an efficient photo-click reaction across the lipid bilayer of liposomes. We reveal that the performance of the photo-click reactions between the monopeptides and photo-generated nitrile imine intermediates is significantly enhanced by enrichment of both reactants in the hydrophobic membrane lamel of liposomes. Enrichment of the DBDAA monopeptide in lipid phase serves as a convenient method to introduce bioorthogonal chemical handles on live cell membranes, which enables fluorescence labelling of single cell's membrane with high spatiotemporal resolution to facilitate the studies on cell membrane dynamics.
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Affiliation(s)
- Xueting Wu
- Key Laboratory of Green Chemistry and Technology of Ministry of Education, College of Chemistry, Sichuan University, 29 Wangjiang Road, Chengdu, 610064, P. R. China
| | - Jiajie Deng
- Key Laboratory of Green Chemistry and Technology of Ministry of Education, College of Chemistry, Sichuan University, 29 Wangjiang Road, Chengdu, 610064, P. R. China
| | - Guiling Guo
- Key Laboratory of Green Chemistry and Technology of Ministry of Education, College of Chemistry, Sichuan University, 29 Wangjiang Road, Chengdu, 610064, P. R. China
| | - Yuanqin Zheng
- Key Laboratory of Green Chemistry and Technology of Ministry of Education, College of Chemistry, Sichuan University, 29 Wangjiang Road, Chengdu, 610064, P. R. China
| | - Qin Xiong
- Key Laboratory of Green Chemistry and Technology of Ministry of Education, College of Chemistry, Sichuan University, 29 Wangjiang Road, Chengdu, 610064, P. R. China
| | - Tingting Zheng
- Key Laboratory of Green Chemistry and Technology of Ministry of Education, College of Chemistry, Sichuan University, 29 Wangjiang Road, Chengdu, 610064, P. R. China
| | - Xiaohu Zhao
- Key Laboratory of Green Chemistry and Technology of Ministry of Education, College of Chemistry, Sichuan University, 29 Wangjiang Road, Chengdu, 610064, P. R. China
| | - Zhipeng Yu
- Key Laboratory of Green Chemistry and Technology of Ministry of Education, College of Chemistry, Sichuan University, 29 Wangjiang Road, Chengdu, 610064, P. R. China
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15
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Kang D, Cheung ST, Kim J. Bioorthogonal Hydroamination of Push–Pull‐Activated Linear Alkynes. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202104863] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Dahye Kang
- Department of Cancer Biology Dana-Farber Cancer Institute Boston MA 02215 USA
- Department of Biological Chemistry and Molecular Pharmacology Harvard Medical School Boston MA 02115 USA
| | - Sheldon T. Cheung
- Department of Cancer Biology Dana-Farber Cancer Institute Boston MA 02215 USA
- Department of Biological Chemistry and Molecular Pharmacology Harvard Medical School Boston MA 02115 USA
| | - Justin Kim
- Department of Cancer Biology Dana-Farber Cancer Institute Boston MA 02215 USA
- Department of Biological Chemistry and Molecular Pharmacology Harvard Medical School Boston MA 02115 USA
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16
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Li K, Fong D, Meichsner E, Adronov A. A Survey of Strain-Promoted Azide-Alkyne Cycloaddition in Polymer Chemistry. Chemistry 2021; 27:5057-5073. [PMID: 33017499 DOI: 10.1002/chem.202003386] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2020] [Indexed: 02/06/2023]
Abstract
Highly efficient reactions that enable the assembly of molecules into complex structures have driven extensive progress in synthetic chemistry. In particular, reactions that occur under mild conditions and in benign solvents, while producing no by-products and rapidly reach completion are attracting significant attention. Amongst these, the strain-promoted azide-alkyne cycloaddition, involving various cyclooctyne derivatives reacting with azide-bearing molecules, has gained extensive popularity in organic synthesis and bioorthogonal chemistry. This reaction has also recently gained momentum in polymer chemistry, where it has been used to decorate, link, crosslink, and even prepare polymer chains. This survey highlights key achievements in the use of this reaction to produce a variety of polymeric constructs for disparate applications.
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Affiliation(s)
- Kelvin Li
- Department of Chemistry & Chemical Biology, McMaster University, 1280 Main St. W., Hamilton, ON, L8S 4M1, Canada
| | - Darryl Fong
- Department of Chemistry & Chemical Biology, McMaster University, 1280 Main St. W., Hamilton, ON, L8S 4M1, Canada
| | - Eric Meichsner
- Department of Chemistry & Chemical Biology, McMaster University, 1280 Main St. W., Hamilton, ON, L8S 4M1, Canada
| | - Alex Adronov
- Department of Chemistry & Chemical Biology, McMaster University, 1280 Main St. W., Hamilton, ON, L8S 4M1, Canada
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17
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Theoretical insights into the synthesis reaction mechanism of 1,2,3-triazole based on sakai reaction. Tetrahedron 2021. [DOI: 10.1016/j.tet.2020.131737] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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18
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Pinto‐Pacheco B, Carbery WP, Khan S, Turner DB, Buccella D. Fluorescence Quenching Effects of Tetrazines and Their Diels–Alder Products: Mechanistic Insight Toward Fluorogenic Efficiency. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202008757] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Brismar Pinto‐Pacheco
- Department of Chemistry New York University 100 Washington Square East New York NY 10003 USA
| | - William P. Carbery
- Department of Chemistry New York University 100 Washington Square East New York NY 10003 USA
| | - Sameer Khan
- Department of Chemistry New York University 100 Washington Square East New York NY 10003 USA
| | - Daniel B. Turner
- Department of Chemistry New York University 100 Washington Square East New York NY 10003 USA
- Current address: Micron School of Materials Science and Engineering Boise State University Boise ID 83725 USA
| | - Daniela Buccella
- Department of Chemistry New York University 100 Washington Square East New York NY 10003 USA
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19
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Pinto-Pacheco B, Carbery WP, Khan S, Turner DB, Buccella D. Fluorescence Quenching Effects of Tetrazines and Their Diels-Alder Products: Mechanistic Insight Toward Fluorogenic Efficiency. Angew Chem Int Ed Engl 2020; 59:22140-22149. [PMID: 33245600 DOI: 10.1002/anie.202008757] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2020] [Revised: 06/22/2020] [Indexed: 12/22/2022]
Abstract
Inverse electron demand Diels-Alder reactions between s-tetrazines and strained dienophiles have numerous applications in fluorescent labeling of biomolecules. Herein, we investigate the effect of the dienophile on the fluorescence enhancement obtained upon reaction with a tetrazine-quenched fluorophore and study the possible mechanisms of fluorescence quenching by both the tetrazine and its reaction products. The dihydropyridazine obtained from reaction with a strained cyclooctene shows a residual fluorescence quenching effect, greater than that exerted by the pyridazine arising from reaction with the analogous alkyne. Linear and ultrabroadband two-dimensional electronic spectroscopy experiments reveal that resonance energy transfer is the mechanism responsible for the fluorescence quenching effect of tetrazines, whereas a mechanism involving more intimate electronic coupling, likely photoinduced electron transfer, is responsible for the quenching effect of the dihydropyridazine. These studies uncover parameters that can be tuned to maximize fluorogenic efficiency in bioconjugation reactions and reveal that strained alkynes are better reaction partners for achieving maximum contrast ratio.
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Affiliation(s)
- Brismar Pinto-Pacheco
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY, 10003, USA
| | - William P Carbery
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY, 10003, USA
| | - Sameer Khan
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY, 10003, USA
| | - Daniel B Turner
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY, 10003, USA.,Current address: Micron School of Materials Science and Engineering, Boise State University, Boise, ID, 83725, USA
| | - Daniela Buccella
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY, 10003, USA
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20
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Macias‐Contreras M, Zhu L. The Collective Power of Genetically Encoded Protein/Peptide Tags and Bioorthogonal Chemistry in Biological Fluorescence Imaging. CHEMPHOTOCHEM 2020. [DOI: 10.1002/cptc.202000215] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Miguel Macias‐Contreras
- Department of Chemistry and Biochemistry Florida State University 95 Chieftan Way Tallahassee FL 32306-4390 USA
| | - Lei Zhu
- Department of Chemistry and Biochemistry Florida State University 95 Chieftan Way Tallahassee FL 32306-4390 USA
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21
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Shi W, Tang F, Ao J, Yu Q, Liu J, Tang Y, Jiang B, Ren X, Huang H, Yang W, Huang W. Manipulating the Click Reactivity of Dibenzoazacyclooctynes: From Azide Click Component to Caged Acylation Reagent by Silver Catalysis. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202009408] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Wei Shi
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
- University of Chinese Academy of Sciences No.19A Yuquan Road Beijing 100049 China
- School of Pharmaceutical Science and Technology Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences Hangzhou 310024 China
| | - Feng Tang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
- School of Pharmaceutical Science and Technology Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences Hangzhou 310024 China
| | - Jiwei Ao
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - Qun Yu
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - Junjie Liu
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - Yubo Tang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - Bofeng Jiang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - Xuelian Ren
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - He Huang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
- University of Chinese Academy of Sciences No.19A Yuquan Road Beijing 100049 China
| | - Weibo Yang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
- University of Chinese Academy of Sciences No.19A Yuquan Road Beijing 100049 China
- School of Pharmaceutical Science and Technology Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences Hangzhou 310024 China
| | - Wei Huang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
- University of Chinese Academy of Sciences No.19A Yuquan Road Beijing 100049 China
- School of Pharmaceutical Science and Technology Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences Hangzhou 310024 China
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22
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Shi W, Tang F, Ao J, Yu Q, Liu J, Tang Y, Jiang B, Ren X, Huang H, Yang W, Huang W. Manipulating the Click Reactivity of Dibenzoazacyclooctynes: From Azide Click Component to Caged Acylation Reagent by Silver Catalysis. Angew Chem Int Ed Engl 2020; 59:19940-19944. [DOI: 10.1002/anie.202009408] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2020] [Indexed: 12/30/2022]
Affiliation(s)
- Wei Shi
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
- University of Chinese Academy of Sciences No.19A Yuquan Road Beijing 100049 China
- School of Pharmaceutical Science and Technology Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences Hangzhou 310024 China
| | - Feng Tang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
- School of Pharmaceutical Science and Technology Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences Hangzhou 310024 China
| | - Jiwei Ao
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - Qun Yu
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - Junjie Liu
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - Yubo Tang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - Bofeng Jiang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - Xuelian Ren
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
| | - He Huang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
- University of Chinese Academy of Sciences No.19A Yuquan Road Beijing 100049 China
| | - Weibo Yang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
- University of Chinese Academy of Sciences No.19A Yuquan Road Beijing 100049 China
- School of Pharmaceutical Science and Technology Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences Hangzhou 310024 China
| | - Wei Huang
- CAS Key Laboratory of Receptor Research CAS Center for Excellence in Molecular Cell Science Center for Biotherapeutics Discovery Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zuchongzhi Road Pudong Shanghai 201203 China
- University of Chinese Academy of Sciences No.19A Yuquan Road Beijing 100049 China
- School of Pharmaceutical Science and Technology Hangzhou Institute for Advanced Study University of Chinese Academy of Sciences Hangzhou 310024 China
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23
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Shrestha R, Teesdale-Spittle PH, Lewis AR, Rendle PM. Gadolinium Complexes Attached to Poly Ethoxy Ethyl Glycinamide (PEE-G) Dendrons: Magnetic Resonance Imaging Contrast Agents with Increased Relaxivity. Chempluschem 2020; 85:1881-1892. [PMID: 32845091 DOI: 10.1002/cplu.202000409] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2020] [Revised: 08/01/2020] [Indexed: 12/16/2022]
Abstract
A range of poly ethoxy ethyl glycinamide (PEE-G) dendron scaffolds with gadolinium (III) complexes attached were synthesized with a focus on product purity and high Gd(III) loading. The nuclear magnetic resonance relaxivity of these products was measured and compared with commercially available low-molecular-weight magnetic resonance imaging contrast agents. Over twice the relaxivity based on Gd(III) concentration, and up to 20-fold increase in relaxivity were observed based on molecular concentration. Relaxivity properties were observed to increase with both increasing molecular weight and number of Gd(III) complexes attached, however a plateau was reached for molecular weight increase. T1 and T2 relaxivity properties were also investigated at two different magnetic fields. Transverse relaxivity is unaffected by magnetic field strength whereas increase in longitudinal relaxivity was not as pronounced at the higher field.
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Affiliation(s)
- Rinu Shrestha
- Victoria University of Wellington, PO Box 33 436, Petone, 5046, New Zealand
| | | | - Andrew R Lewis
- Victoria University of Wellington, PO Box 33 436, Petone, 5046, New Zealand.,Callaghan Innovation, PO Box 31 310, Lower Hutt, 5010, New Zealand
| | - Phillip M Rendle
- Victoria University of Wellington, PO Box 33 436, Petone, 5046, New Zealand
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24
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Weterings J, Rijcken CJF, Veldhuis H, Meulemans T, Hadavi D, Timmers M, Honing M, Ippel H, Liskamp RMJ. TMTHSI, a superior 7-membered ring alkyne containing reagent for strain-promoted azide-alkyne cycloaddition reactions. Chem Sci 2020; 11:9011-9016. [PMID: 34123155 PMCID: PMC8163418 DOI: 10.1039/d0sc03477k] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2020] [Accepted: 08/08/2020] [Indexed: 12/25/2022] Open
Abstract
We describe the development of TMTH-SulfoxImine (TMTHSI) as a superior click reagent. This reagent combines a great reactivity, with small size and low hydrophobicity and compares outstandingly with existing click reagents. TMTHSI can be conveniently functionalized with a variety of linkers allowing attachment of a diversity of small molecules and (peptide, nucleic acid) biologics.
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Affiliation(s)
- Jimmy Weterings
- Cristal Therapeutics Oxfordlaan 55 6229 EV Maastricht The Netherlands
| | | | | | | | - Darya Hadavi
- The Maastricht Multimodal Molecular Imaging Institute (M4I), Maastricht University Universiteitssingel 50 6229 ER Maastricht The Netherlands
| | - Matt Timmers
- Cristal Therapeutics Oxfordlaan 55 6229 EV Maastricht The Netherlands
| | - Maarten Honing
- The Maastricht Multimodal Molecular Imaging Institute (M4I), Maastricht University Universiteitssingel 50 6229 ER Maastricht The Netherlands
| | - Hans Ippel
- Department of Biochemistry, CARIM, Maastricht University Universiteitssingel 50 6229 ER Maastricht The Netherlands
| | - Rob M J Liskamp
- Cristal Therapeutics Oxfordlaan 55 6229 EV Maastricht The Netherlands
- Department of Biochemistry, CARIM, Maastricht University Universiteitssingel 50 6229 ER Maastricht The Netherlands
- School of Chemistry, Joseph Black Building, University of Glasgow University Avenue Glasgow G12 8QQ UK
- Chemical Biology and Drug Discovery, Department of Pharmaceutics, Utrecht University Universiteitsweg 99 3584 CG Utrecht The Netherlands
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25
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Svatunek D, Eilenberger G, Denk C, Lumpi D, Hametner C, Allmaier G, Mikula H. Live Monitoring of Strain-Promoted Azide Alkyne Cycloadditions in Complex Reaction Environments by Inline ATR-IR Spectroscopy. Chemistry 2020; 26:9851-9854. [PMID: 31944448 PMCID: PMC7496163 DOI: 10.1002/chem.201905478] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Revised: 01/10/2020] [Indexed: 11/06/2022]
Abstract
The strain-promoted azide alkyne cycloaddition (SPAAC) is a powerful tool for forming covalent bonds between molecules even under physiological conditions, and therefore found broad application in fields ranging from biological chemistry and biomedical research to materials sciences. For many applications, knowledge about reaction kinetics of these ligations is of utmost importance. Kinetics are commonly assessed and studied by NMR measurements. However, these experiments are limited in terms of temperature and restricted to deuterated solvents. By using an inline ATR-IR probe we show that the cycloaddition of azides and alkynes can be monitored in aqueous and even complex biological fluids enabling the investigation of reaction kinetics in various solvents and even human blood plasma under controlled conditions in low reaction volumes.
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Affiliation(s)
- Dennis Svatunek
- Institute of Applied Synthetic ChemistryTU WienGetreidemarkt 91060ViennaAustria
- Institute of Chemical Technologies and AnalyticsTU WienGetreidemarkt 91060ViennaAustria
| | | | - Christoph Denk
- Institute of Applied Synthetic ChemistryTU WienGetreidemarkt 91060ViennaAustria
| | - Daniel Lumpi
- Institute of Applied Synthetic ChemistryTU WienGetreidemarkt 91060ViennaAustria
| | - Christian Hametner
- Institute of Applied Synthetic ChemistryTU WienGetreidemarkt 91060ViennaAustria
| | - Günter Allmaier
- Institute of Chemical Technologies and AnalyticsTU WienGetreidemarkt 91060ViennaAustria
| | - Hannes Mikula
- Institute of Applied Synthetic ChemistryTU WienGetreidemarkt 91060ViennaAustria
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26
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Zeng Q, He C, Zhou S, Dong K, Qiu L, Xu X. Dirhodium(II)‐Catalyzed Cyclopropanation of Alkyne‐Containing α‐Diazoacetates for the Synthesis of Cycloalkynes. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202000360] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Qian Zeng
- College of ChemistryChemical Engineering and Materials ScienceSoochow University Suzhou 215123 People's Republic of China
| | - Ciwang He
- College of ChemistryChemical Engineering and Materials ScienceSoochow University Suzhou 215123 People's Republic of China
| | - Su Zhou
- Guangdong Key Laboratory of Chiral Molecule and Drug DiscoverySchool of Pharmaceutical SciencesSun Yat-sen University Guangzhou 510006 People's Republic of China
| | - Kuiyong Dong
- College of ChemistryChemical Engineering and Materials ScienceSoochow University Suzhou 215123 People's Republic of China
| | - Lihua Qiu
- College of ChemistryChemical Engineering and Materials ScienceSoochow University Suzhou 215123 People's Republic of China
| | - Xinfang Xu
- College of ChemistryChemical Engineering and Materials ScienceSoochow University Suzhou 215123 People's Republic of China
- Guangdong Key Laboratory of Chiral Molecule and Drug DiscoverySchool of Pharmaceutical SciencesSun Yat-sen University Guangzhou 510006 People's Republic of China
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27
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Li Y, Fu H. Bioorthogonal Ligations and Cleavages in Chemical Biology. ChemistryOpen 2020; 9:835-853. [PMID: 32817809 PMCID: PMC7426781 DOI: 10.1002/open.202000128] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Revised: 07/14/2020] [Indexed: 12/11/2022] Open
Abstract
Bioorthogonal reactions including the bioorthogonal ligations and cleavages have become an active field of research in chemical biology, and they play important roles in chemical modification and functional regulation of biomolecules. This review summarizes the developments and applications of the representative bioorthogonal reactions including the Staudinger reactions, the metal-mediated bioorthogonal reactions, the strain-promoted cycloadditions, the inverse electron demand Diels-Alder reactions, the light-triggered bioorthogonal reactions, and the reactions of chloroquinoxalines and ortho-dithiophenols.
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Affiliation(s)
- Youshan Li
- Key Laboratory of Bioorganic Phosphorus Chemistry and Chemical Biology (Ministry of Education)Department of ChemistryTsinghua UniversityBeijing100084China
| | - Hua Fu
- Key Laboratory of Bioorganic Phosphorus Chemistry and Chemical Biology (Ministry of Education)Department of ChemistryTsinghua UniversityBeijing100084China
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28
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Baalmann M, Neises L, Bitsch S, Schneider H, Deweid L, Werther P, Ilkenhans N, Wolfring M, Ziegler MJ, Wilhelm J, Kolmar H, Wombacher R. A Bioorthogonal Click Chemistry Toolbox for Targeted Synthesis of Branched and Well-Defined Protein-Protein Conjugates. Angew Chem Int Ed Engl 2020; 59:12885-12893. [PMID: 32342666 PMCID: PMC7496671 DOI: 10.1002/anie.201915079] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2019] [Revised: 04/23/2020] [Indexed: 01/19/2023]
Abstract
Bioorthogonal chemistry holds great potential to generate difficult-to-access protein-protein conjugate architectures. Current applications are hampered by challenging protein expression systems, slow conjugation chemistry, use of undesirable catalysts, or often do not result in quantitative product formation. Here we present a highly efficient technology for protein functionalization with commonly used bioorthogonal motifs for Diels-Alder cycloaddition with inverse electron demand (DAinv ). With the aim of precisely generating branched protein chimeras, we systematically assessed the reactivity, stability and side product formation of various bioorthogonal chemistries directly at the protein level. We demonstrate the efficiency and versatility of our conjugation platform using different functional proteins and the therapeutic antibody trastuzumab. This technology enables fast and routine access to tailored and hitherto inaccessible protein chimeras useful for a variety of scientific disciplines. We expect our work to substantially enhance antibody applications such as immunodetection and protein toxin-based targeted cancer therapies.
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Affiliation(s)
- Mathis Baalmann
- Institute of Pharmacy and Molecular BiotechnologyHeidelberg UniversityIm Neuenheimer Feld 36469120HeidelbergGermany
| | - Laura Neises
- Institute of Pharmacy and Molecular BiotechnologyHeidelberg UniversityIm Neuenheimer Feld 36469120HeidelbergGermany
| | - Sebastian Bitsch
- Institute for Organic Chemistry and BiochemistryTechnische Universität DarmstadtAlarich-Weiss-Straße 464287DarmstadtGermany
| | - Hendrik Schneider
- Institute for Organic Chemistry and BiochemistryTechnische Universität DarmstadtAlarich-Weiss-Straße 464287DarmstadtGermany
| | - Lukas Deweid
- Institute for Organic Chemistry and BiochemistryTechnische Universität DarmstadtAlarich-Weiss-Straße 464287DarmstadtGermany
| | - Philipp Werther
- Institute of Pharmacy and Molecular BiotechnologyHeidelberg UniversityIm Neuenheimer Feld 36469120HeidelbergGermany
| | - Nadja Ilkenhans
- Institute of Pharmacy and Molecular BiotechnologyHeidelberg UniversityIm Neuenheimer Feld 36469120HeidelbergGermany
| | - Martin Wolfring
- Institute of Pharmacy and Molecular BiotechnologyHeidelberg UniversityIm Neuenheimer Feld 36469120HeidelbergGermany
| | - Michael J. Ziegler
- Institute of Pharmacy and Molecular BiotechnologyHeidelberg UniversityIm Neuenheimer Feld 36469120HeidelbergGermany
| | - Jonas Wilhelm
- Institute of Pharmacy and Molecular BiotechnologyHeidelberg UniversityIm Neuenheimer Feld 36469120HeidelbergGermany
| | - Harald Kolmar
- Institute for Organic Chemistry and BiochemistryTechnische Universität DarmstadtAlarich-Weiss-Straße 464287DarmstadtGermany
| | - Richard Wombacher
- Institute of Pharmacy and Molecular BiotechnologyHeidelberg UniversityIm Neuenheimer Feld 36469120HeidelbergGermany
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29
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Baalmann M, Neises L, Bitsch S, Schneider H, Deweid L, Werther P, Ilkenhans N, Wolfring M, Ziegler MJ, Wilhelm J, Kolmar H, Wombacher R. A Bioorthogonal Click Chemistry Toolbox for Targeted Synthesis of Branched and Well‐Defined Protein–Protein Conjugates. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201915079] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Mathis Baalmann
- Institute of Pharmacy and Molecular Biotechnology Heidelberg University Im Neuenheimer Feld 364 69120 Heidelberg Germany
| | - Laura Neises
- Institute of Pharmacy and Molecular Biotechnology Heidelberg University Im Neuenheimer Feld 364 69120 Heidelberg Germany
| | - Sebastian Bitsch
- Institute for Organic Chemistry and Biochemistry Technische Universität Darmstadt Alarich-Weiss-Straße 4 64287 Darmstadt Germany
| | - Hendrik Schneider
- Institute for Organic Chemistry and Biochemistry Technische Universität Darmstadt Alarich-Weiss-Straße 4 64287 Darmstadt Germany
| | - Lukas Deweid
- Institute for Organic Chemistry and Biochemistry Technische Universität Darmstadt Alarich-Weiss-Straße 4 64287 Darmstadt Germany
| | - Philipp Werther
- Institute of Pharmacy and Molecular Biotechnology Heidelberg University Im Neuenheimer Feld 364 69120 Heidelberg Germany
| | - Nadja Ilkenhans
- Institute of Pharmacy and Molecular Biotechnology Heidelberg University Im Neuenheimer Feld 364 69120 Heidelberg Germany
| | - Martin Wolfring
- Institute of Pharmacy and Molecular Biotechnology Heidelberg University Im Neuenheimer Feld 364 69120 Heidelberg Germany
| | - Michael J. Ziegler
- Institute of Pharmacy and Molecular Biotechnology Heidelberg University Im Neuenheimer Feld 364 69120 Heidelberg Germany
| | - Jonas Wilhelm
- Institute of Pharmacy and Molecular Biotechnology Heidelberg University Im Neuenheimer Feld 364 69120 Heidelberg Germany
| | - Harald Kolmar
- Institute for Organic Chemistry and Biochemistry Technische Universität Darmstadt Alarich-Weiss-Straße 4 64287 Darmstadt Germany
| | - Richard Wombacher
- Institute of Pharmacy and Molecular Biotechnology Heidelberg University Im Neuenheimer Feld 364 69120 Heidelberg Germany
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30
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Jiang S, Wu X, Liu H, Deng J, Zhang X, Yao Z, Zheng Y, Li B, Yu Z. Ring‐Strain‐Promoted Ultrafast Diaryltetrazole–Alkyne Photoclick Reactions Triggered by Visible Light. CHEMPHOTOCHEM 2020. [DOI: 10.1002/cptc.201900290] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Shichao Jiang
- Key Laboratory of Green Chemistry and Technology of Ministry of EducationSichuan University 29 Wangjiang Road Chengdu 610064 China
| | - Xueting Wu
- Key Laboratory of Green Chemistry and Technology of Ministry of EducationSichuan University 29 Wangjiang Road Chengdu 610064 China
| | - Hui Liu
- Key Laboratory of Green Chemistry and Technology of Ministry of EducationSichuan University 29 Wangjiang Road Chengdu 610064 China
| | - Jiajie Deng
- Key Laboratory of Green Chemistry and Technology of Ministry of EducationSichuan University 29 Wangjiang Road Chengdu 610064 China
| | - Xiaocui Zhang
- Key Laboratory of Green Chemistry and Technology of Ministry of EducationSichuan University 29 Wangjiang Road Chengdu 610064 China
| | - Zhuojun Yao
- Key Laboratory of Green Chemistry and Technology of Ministry of EducationSichuan University 29 Wangjiang Road Chengdu 610064 China
| | - Yuanqin Zheng
- Key Laboratory of Green Chemistry and Technology of Ministry of EducationSichuan University 29 Wangjiang Road Chengdu 610064 China
| | - Bo Li
- Key Laboratory of Green Chemistry and Technology of Ministry of EducationSichuan University 29 Wangjiang Road Chengdu 610064 China
| | - Zhipeng Yu
- Key Laboratory of Green Chemistry and Technology of Ministry of EducationSichuan University 29 Wangjiang Road Chengdu 610064 China
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31
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Engel A, Dehnen S. Amino Acid Functionalized Organotin Trichlorides and Their Tin Sulfide Clusters. Eur J Inorg Chem 2019. [DOI: 10.1002/ejic.201900528] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Annikka Engel
- Fachbereich Chemie and Wissenschaftliches Zentrum für Materialwissenschaften (WZMW) Philipps‐Universität Marburg Hans‐Meerwein‐Straße 4 35043 Marburg Germany
| | - Stefanie Dehnen
- Fachbereich Chemie and Wissenschaftliches Zentrum für Materialwissenschaften (WZMW) Philipps‐Universität Marburg Hans‐Meerwein‐Straße 4 35043 Marburg Germany
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32
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Porte K, Renoux B, Péraudeau E, Clarhaut J, Eddhif B, Poinot P, Gravel E, Doris E, Wijkhuisen A, Audisio D, Papot S, Taran F. Controlled Release of a Micelle Payload via Sequential Enzymatic and Bioorthogonal Reactions in Living Systems. Angew Chem Int Ed Engl 2019; 58:6366-6370. [DOI: 10.1002/anie.201902137] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2019] [Indexed: 12/25/2022]
Affiliation(s)
- Karine Porte
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBMCEA, Université Paris-Saclay 91191 Gif-sur-Yvette France
| | - Brigitte Renoux
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
| | - Elodie Péraudeau
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
- CHU de Poitiers 86021 Poitiers France
| | - Jonathan Clarhaut
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
- CHU de Poitiers 86021 Poitiers France
| | - Balkis Eddhif
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
| | - Pauline Poinot
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
| | - Edmond Gravel
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBMCEA, Université Paris-Saclay 91191 Gif-sur-Yvette France
| | - Eric Doris
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBMCEA, Université Paris-Saclay 91191 Gif-sur-Yvette France
| | - Anne Wijkhuisen
- Service de Pharmacologie et d'Immunoanalyse DRF-JOLIOT-SPICEAUniversité Paris-Saclay 91191 Gif-sur-Yvette France
| | - Davide Audisio
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBMCEA, Université Paris-Saclay 91191 Gif-sur-Yvette France
| | - Sébastien Papot
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
| | - Frédéric Taran
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBMCEA, Université Paris-Saclay 91191 Gif-sur-Yvette France
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33
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Porte K, Renoux B, Péraudeau E, Clarhaut J, Eddhif B, Poinot P, Gravel E, Doris E, Wijkhuisen A, Audisio D, Papot S, Taran F. Controlled Release of a Micelle Payload via Sequential Enzymatic and Bioorthogonal Reactions in Living Systems. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201902137] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Karine Porte
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBMCEA, Université Paris-Saclay 91191 Gif-sur-Yvette France
| | - Brigitte Renoux
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
| | - Elodie Péraudeau
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
- CHU de Poitiers 86021 Poitiers France
| | - Jonathan Clarhaut
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
- CHU de Poitiers 86021 Poitiers France
| | - Balkis Eddhif
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
| | - Pauline Poinot
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
| | - Edmond Gravel
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBMCEA, Université Paris-Saclay 91191 Gif-sur-Yvette France
| | - Eric Doris
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBMCEA, Université Paris-Saclay 91191 Gif-sur-Yvette France
| | - Anne Wijkhuisen
- Service de Pharmacologie et d'Immunoanalyse DRF-JOLIOT-SPICEAUniversité Paris-Saclay 91191 Gif-sur-Yvette France
| | - Davide Audisio
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBMCEA, Université Paris-Saclay 91191 Gif-sur-Yvette France
| | - Sébastien Papot
- Université de PoitiersUMR-CNRS 7285Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP) 86073 Poitiers France
| | - Frédéric Taran
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBMCEA, Université Paris-Saclay 91191 Gif-sur-Yvette France
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34
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Hamlin TA, Levandowski BJ, Narsaria AK, Houk KN, Bickelhaupt FM. Structural Distortion of Cycloalkynes Influences Cycloaddition Rates both by Strain and Interaction Energies. Chemistry 2019; 25:6342-6348. [PMID: 30779472 PMCID: PMC6519225 DOI: 10.1002/chem.201900295] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2019] [Revised: 02/16/2019] [Indexed: 12/27/2022]
Abstract
The reactivities of 2‐butyne, cycloheptyne, cyclooctyne, and cyclononyne in the 1,3‐dipolar cycloaddition reaction with methyl azide were evaluated through DFT calculations at the M06‐2X/6‐311++G(d)//M06‐2X/6‐31+G(d) level of theory. Computed activation free energies for the cycloadditions of cycloalkynes are 16.5–22.0 kcal mol−1 lower in energy than that of the acyclic 2‐butyne. The strained or predistorted nature of cycloalkynes is often solely used to rationalize this significant rate enhancement. Our distortion/interaction–activation strain analysis has been revealed that the degree of geometrical predistortion of the cycloalkyne ground‐state geometries acts to enhance reactivity compared with that of acyclic alkynes through three distinct mechanisms, not only due to (i) a reduced strain or distortion energy, but also to (ii) a smaller HOMO–LUMO gap, and (iii) an enhanced orbital overlap, which both contribute to more stabilizing orbital interactions.
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Affiliation(s)
- Trevor A Hamlin
- Department of Theoretical Chemistry, Amsterdam Center for Multiscale Modeling (ACMM), Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081 HV, Amsterdam, The Netherlands
| | - Brian J Levandowski
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, 90095, USA
| | - Ayush K Narsaria
- Department of Theoretical Chemistry, Amsterdam Center for Multiscale Modeling (ACMM), Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081 HV, Amsterdam, The Netherlands
| | - Kendall N Houk
- Department of Chemistry and Biochemistry, University of California, Los Angeles, CA, 90095, USA
| | - F Matthias Bickelhaupt
- Department of Theoretical Chemistry, Amsterdam Center for Multiscale Modeling (ACMM), Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081 HV, Amsterdam, The Netherlands.,Institute for Molecules and Materials (IMM), Radboud University of Nijmegen, Heyendaalseweg 135, 6525 AJ, Nijmegen, The Netherlands
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35
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Chinoy ZS, Bodineau C, Favre C, Moremen KW, Durán RV, Friscourt F. Selective Engineering of Linkage-Specific α2,6-N-Linked Sialoproteins Using Sydnone-Modified Sialic Acid Bioorthogonal Reporters. Angew Chem Int Ed Engl 2019; 58:4281-4285. [PMID: 30706985 PMCID: PMC6450558 DOI: 10.1002/anie.201814266] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2018] [Revised: 01/12/2019] [Indexed: 02/02/2023]
Abstract
The metabolic oligosaccharide engineering (MOE) strategy using unnatural sialic acids has recently enabled the visualization of the sialome in living systems. However, MOE only reports on global sialylation and dissected information regarding subsets of sialosides is missing. Described here is the synthesis and utilization of sialic acids modified with a sydnone reporter for the metabolic labeling of sialoconjugates. The positioning of the reporter on the sugar significantly altered its metabolic fate. Further in vitro enzymatic assays revealed that the 9-modified neuraminic acid is preferentially accepted by the sialyltransferase ST6Gal-I over ST3Gal-IV, leading to the favored incorporation of the reporter into linkage-specific α2,6-N-linked sialoproteins. This sydnone sugar presents the possibility of investigating the roles of specific sialosides.
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Affiliation(s)
- Zoeisha S. Chinoy
- Institut Européen de Chimie et Biologie, Université de Bordeaux, 2 rue Robert Escarpit, 33607 Pessac, France
- Institut de Neurosciences Cognitives et Intégratives d’Aquitaine, CNRS UMR5287, Bordeaux, France
| | - Clément Bodineau
- Institut Européen de Chimie et Biologie, Université de Bordeaux, 2 rue Robert Escarpit, 33607 Pessac, France
- Institut Bergonié, INSERM U1218, Bordeaux, France
| | - Camille Favre
- Institut Européen de Chimie et Biologie, Université de Bordeaux, 2 rue Robert Escarpit, 33607 Pessac, France
- Institut de Neurosciences Cognitives et Intégratives d’Aquitaine, CNRS UMR5287, Bordeaux, France
| | - Kelley W. Moremen
- Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA USA
- Complex Carbohydrate Research Center, University of Georgia, Athens, GA USA
| | - Raúl V. Durán
- Institut Européen de Chimie et Biologie, Université de Bordeaux, 2 rue Robert Escarpit, 33607 Pessac, France
- Institut Bergonié, INSERM U1218, Bordeaux, France
- Current address: Centro Andaluz de Biología Molecular y Medicina Regenerativa, Consejo Superior de Investigaciones Científicas - Universidad de Sevilla - Universidad Pablo de Olavide, Avda. Américo Vespucio 24, 41092 Seville, Spain
| | - Frédéric Friscourt
- Institut Européen de Chimie et Biologie, Université de Bordeaux, 2 rue Robert Escarpit, 33607 Pessac, France
- Institut de Neurosciences Cognitives et Intégratives d’Aquitaine, CNRS UMR5287, Bordeaux, France
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36
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Selective Engineering of Linkage‐Specific α2,6‐
N
‐Linked Sialoproteins Using Sydnone‐Modified Sialic Acid Bioorthogonal Reporters. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201814266] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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37
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Brendel JC, Sanchis J, Catrouillet S, Czuba E, Chen MZ, Long BM, Nowell C, Johnston A, Jolliffe KA, Perrier S. Secondary Self‐Assembly of Supramolecular Nanotubes into Tubisomes and Their Activity on Cells. Angew Chem Int Ed Engl 2018; 57:16678-16682. [DOI: 10.1002/anie.201808543] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Revised: 10/04/2018] [Indexed: 12/22/2022]
Affiliation(s)
- Johannes C. Brendel
- Department of ChemistryUniversity of Warwick Gibbet Hill Road Coventry CV4 7AL UK
| | - Joaquin Sanchis
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
| | - Sylvain Catrouillet
- Department of ChemistryUniversity of Warwick Gibbet Hill Road Coventry CV4 7AL UK
| | - Ewa Czuba
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
| | - Moore Z. Chen
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
| | - Benjamin M. Long
- The University of SydneySchool of Chemistry Building F11 Sydney NSW 2006 Australia
| | - Cameron Nowell
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
| | - Angus Johnston
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
| | - Katrina A. Jolliffe
- The University of SydneySchool of Chemistry Building F11 Sydney NSW 2006 Australia
| | - Sébastien Perrier
- Department of ChemistryUniversity of Warwick Gibbet Hill Road Coventry CV4 7AL UK
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
- Warwick Medical SchoolThe University of Warwick Coventry CV4 7AL UK
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38
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Brendel JC, Sanchis J, Catrouillet S, Czuba E, Chen MZ, Long BM, Nowell C, Johnston A, Jolliffe KA, Perrier S. Secondary Self‐Assembly of Supramolecular Nanotubes into Tubisomes and Their Activity on Cells. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201808543] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Johannes C. Brendel
- Department of ChemistryUniversity of Warwick Gibbet Hill Road Coventry CV4 7AL UK
| | - Joaquin Sanchis
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
| | - Sylvain Catrouillet
- Department of ChemistryUniversity of Warwick Gibbet Hill Road Coventry CV4 7AL UK
| | - Ewa Czuba
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
| | - Moore Z. Chen
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
| | - Benjamin M. Long
- The University of SydneySchool of Chemistry Building F11 Sydney NSW 2006 Australia
| | - Cameron Nowell
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
| | - Angus Johnston
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
| | - Katrina A. Jolliffe
- The University of SydneySchool of Chemistry Building F11 Sydney NSW 2006 Australia
| | - Sébastien Perrier
- Department of ChemistryUniversity of Warwick Gibbet Hill Road Coventry CV4 7AL UK
- Faculty of Pharmacy and Pharmaceutical SciencesMonash University 381 Royal Parade Parkville VIC 3052 Australia
- Warwick Medical SchoolThe University of Warwick Coventry CV4 7AL UK
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39
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Svatunek D, Houszka N, Hamlin TA, Bickelhaupt FM, Mikula H. Chemoselectivity of Tertiary Azides in Strain-Promoted Alkyne-Azide Cycloadditions. Chemistry 2018; 25:754-758. [PMID: 30347481 PMCID: PMC6391941 DOI: 10.1002/chem.201805215] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2018] [Indexed: 12/31/2022]
Abstract
The strain‐promoted alkyne‐azide cycloaddition (SPAAC) is the most commonly employed bioorthogonal reaction with applications in a broad range of fields. Over the years, several different cyclooctyne derivatives have been developed and investigated in regard to their reactivity in SPAAC reactions with azides. However, only a few studies examined the influence of structurally diverse azides on reaction kinetics. Herein, we report our investigations of the reactivity of primary, secondary, and tertiary azides with the cyclooctynes BCN and ADIBO applying experimental and computational methods. All azides show similar reaction rates with the sterically non‐demanding cyclooctyne BCN. However, due to the increased steric demand of the dibenzocyclooctyne ADIBO, the reactivity of tertiary azides drops by several orders of magnitude in comparison to primary and secondary azides. We show that this chemoselective behavior of tertiary azides can be exploited to achieve semiorthogonal dual‐labeling without the need for any catalyst using SPAAC exclusively.
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Affiliation(s)
- Dennis Svatunek
- Institute of Applied Synthetic Chemistry, TU Wien (Vienna University of Technology), Getreidemarkt 9/163, 1060, Vienna, Austria.,Department of Theoretical Chemistry and Amsterdam Center for, Multiscale Modeling (ACMM), Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081, HV, Amsterdam, The Netherlands
| | - Nicole Houszka
- Institute of Applied Synthetic Chemistry, TU Wien (Vienna University of Technology), Getreidemarkt 9/163, 1060, Vienna, Austria
| | - Trevor A Hamlin
- Department of Theoretical Chemistry and Amsterdam Center for, Multiscale Modeling (ACMM), Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081, HV, Amsterdam, The Netherlands
| | - F Matthias Bickelhaupt
- Department of Theoretical Chemistry and Amsterdam Center for, Multiscale Modeling (ACMM), Vrije Universiteit Amsterdam, De Boelelaan 1083, 1081, HV, Amsterdam, The Netherlands.,Institute for Molecules and Materials (IMM), Radboud University, Heyendaalseweg 135, 6525, AJ, Nijmegen, The Netherlands
| | - Hannes Mikula
- Institute of Applied Synthetic Chemistry, TU Wien (Vienna University of Technology), Getreidemarkt 9/163, 1060, Vienna, Austria
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40
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Akgun B, Hall DG. Boronic Acids as Bioorthogonal Probes for Site‐Selective Labeling of Proteins. Angew Chem Int Ed Engl 2018; 57:13028-13044. [DOI: 10.1002/anie.201712611] [Citation(s) in RCA: 60] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2017] [Revised: 04/23/2018] [Indexed: 12/11/2022]
Affiliation(s)
- Burcin Akgun
- Department of Chemistry—CCIS 4–010University of Alberta Edmonton Alberta T6G 2G2 Canada
| | - Dennis G. Hall
- Department of Chemistry—CCIS 4–010University of Alberta Edmonton Alberta T6G 2G2 Canada
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41
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Akgun B, Hall DG. Boronsäuren als bioorthogonale Sonden für zentrenselektives Protein‐Labeling. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201712611] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Burcin Akgun
- Department of Chemistry – CCIS 4-010University of Alberta Edmonton Alberta T6G 2G2 Kanada
| | - Dennis G. Hall
- Department of Chemistry – CCIS 4-010University of Alberta Edmonton Alberta T6G 2G2 Kanada
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42
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Lis C, Rubner S, Gröst C, Hoffmann R, Knappe D, Berg T. iSPAAC: Isomer-Free Generation of a Bcl-xL
-Inhibitor in Living Cells. Chemistry 2018; 24:13762-13766. [DOI: 10.1002/chem.201803032] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2018] [Indexed: 11/12/2022]
Affiliation(s)
- Christian Lis
- Leipzig University; Institute of Organic Chemistry; Johannisallee 29 04103 Leipzig Germany
| | - Stefan Rubner
- Leipzig University; Institute of Organic Chemistry; Johannisallee 29 04103 Leipzig Germany
| | - Corinna Gröst
- Leipzig University; Institute of Organic Chemistry; Johannisallee 29 04103 Leipzig Germany
| | - Ralf Hoffmann
- Leipzig University; Institute of Bioanalytical Chemistry and Center for Biotechnology and Biomedicine (BBZ); Deutscher Platz 5 04103 Leipzig Germany
| | - Daniel Knappe
- Leipzig University; Institute of Bioanalytical Chemistry and Center for Biotechnology and Biomedicine (BBZ); Deutscher Platz 5 04103 Leipzig Germany
| | - Thorsten Berg
- Leipzig University; Institute of Organic Chemistry; Johannisallee 29 04103 Leipzig Germany
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43
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Bernard S, Kumar RA, Porte K, Thuéry P, Taran F, Audisio D. A Practical Synthesis of Valuable Strained Eight-Membered-Ring Derivatives for Click Chemistry. European J Org Chem 2018. [DOI: 10.1002/ejoc.201800139] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Sabrina Bernard
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBM; CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Ramar Arun Kumar
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBM; CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
- SRM Institute of Science and Technology; Department of Chemistry; SRM University; 603203 (D.t.) Kancheepuram Kattankulathur India
| | - Karine Porte
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBM; CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Pierre Thuéry
- NIMBE; CEA; CNRS; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Frédéric Taran
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBM; CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Davide Audisio
- Service de Chimie Bio-organique et Marquage DRF-JOLIOT-SCBM; CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
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44
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Siegl SJ, Vázquez A, Dzijak R, Dračínský M, Galeta J, Rampmaier R, Klepetářová B, Vrabel M. Design and Synthesis of Aza-Bicyclononene Dienophiles for Rapid Fluorogenic Ligations. Chemistry 2018; 24:2426-2432. [PMID: 29243853 DOI: 10.1002/chem.201705188] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2017] [Indexed: 12/15/2022]
Abstract
Fluorogenic bioorthogonal reactions enable visualization of biomolecules under native conditions with excellent signal-to-noise ratio. Here, we present the design and synthesis of conformationally-strained aziridine-fused trans-cyclooctene (aza-TCO) dienophiles, which lead to the formation of fluorescent products in tetrazine ligations without the need for attachment of an extra fluorophore moiety. The presented aza-TCOs adopt the highly strained "half-chair" conformation, which was predicted computationally and confirmed by NMR measurements and X-ray crystallography. Kinetic studies revealed that the aza-TCOs belong to the most reactive dienophiles known to date. The potential of the newly developed aza-TCO probes for bioimaging applications is demonstrated by protein labeling experiments, imaging of cellular glycoconjugates and peptidoglycan imaging of live bacteria.
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Affiliation(s)
- Sebastian J Siegl
- Institute of Organic Chemistry and Biochemistry of the, Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Arcadio Vázquez
- Institute of Organic Chemistry and Biochemistry of the, Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Rastislav Dzijak
- Institute of Organic Chemistry and Biochemistry of the, Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Martin Dračínský
- Institute of Organic Chemistry and Biochemistry of the, Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Juraj Galeta
- Institute of Organic Chemistry and Biochemistry of the, Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Robert Rampmaier
- Institute of Organic Chemistry and Biochemistry of the, Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Blanka Klepetářová
- Institute of Organic Chemistry and Biochemistry of the, Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
| | - Milan Vrabel
- Institute of Organic Chemistry and Biochemistry of the, Czech Academy of Sciences, Flemingovo nám. 2, 16610, Prague 6, Czech Republic
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45
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Qing Y, Pulcu GS, Bell NAW, Bayley H. Bioorthogonal Cycloadditions with Sub-Millisecond Intermediates. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201710262] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Yujia Qing
- Department of Chemistry; University of Oxford; Chemistry Research Laboratory; 12 Mansfield Road Oxford OX1 3TA UK
| | - Gökçe Su Pulcu
- Department of Chemistry; University of Oxford; Chemistry Research Laboratory; 12 Mansfield Road Oxford OX1 3TA UK
| | - Nicholas A. W. Bell
- Department of Chemistry; University of Oxford; Chemistry Research Laboratory; 12 Mansfield Road Oxford OX1 3TA UK
| | - Hagan Bayley
- Department of Chemistry; University of Oxford; Chemistry Research Laboratory; 12 Mansfield Road Oxford OX1 3TA UK
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46
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Qing Y, Pulcu GS, Bell NAW, Bayley H. Bioorthogonal Cycloadditions with Sub-Millisecond Intermediates. Angew Chem Int Ed Engl 2018; 57:1218-1221. [DOI: 10.1002/anie.201710262] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2017] [Indexed: 01/20/2023]
Affiliation(s)
- Yujia Qing
- Department of Chemistry; University of Oxford; Chemistry Research Laboratory; 12 Mansfield Road Oxford OX1 3TA UK
| | - Gökçe Su Pulcu
- Department of Chemistry; University of Oxford; Chemistry Research Laboratory; 12 Mansfield Road Oxford OX1 3TA UK
| | - Nicholas A. W. Bell
- Department of Chemistry; University of Oxford; Chemistry Research Laboratory; 12 Mansfield Road Oxford OX1 3TA UK
| | - Hagan Bayley
- Department of Chemistry; University of Oxford; Chemistry Research Laboratory; 12 Mansfield Road Oxford OX1 3TA UK
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47
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Bruins JJ, Albada B, van Delft F. ortho-Quinones and Analogues Thereof: Highly Reactive Intermediates for Fast and Selective Biofunctionalization. Chemistry 2017; 24:4749-4756. [PMID: 29068513 PMCID: PMC5900998 DOI: 10.1002/chem.201703919] [Citation(s) in RCA: 57] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2017] [Revised: 10/19/2017] [Indexed: 11/22/2022]
Abstract
Fast, selective and facile functionalization of biologically relevant molecules is a pursuit of ever‐growing importance. A promising approach in this regard employs the high reactivity of quinone and quinone analogues for fast conjugation chemistry by nucleophilic addition or cycloadditions. Combined with in situ generation of these compounds, selective conjugation on proteins and surfaces can be uniquely induced in a time and spatially resolved manner: generation of a quinone can often be achieved by simple addition of an enzyme or stoichiometric amounts of chemoselective oxidant, or by exposure to light. In this Minireview, we discuss the generation and subsequent functionalization of quinones, iminoquinones, and quinone methides. We also discuss practical applications regarding these conjugation strategies.
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Affiliation(s)
- Jorick J Bruins
- Laboratory of Organic Chemistry, Wageningen University & Research, Stippeneng 4, 6708 WE, Wageningen, The Netherlands
| | - Bauke Albada
- Laboratory of Organic Chemistry, Wageningen University & Research, Stippeneng 4, 6708 WE, Wageningen, The Netherlands
| | - Floris van Delft
- Laboratory of Organic Chemistry, Wageningen University & Research, Stippeneng 4, 6708 WE, Wageningen, The Netherlands
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48
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Staegemann MH, Gräfe S, Gitter B, Achazi K, Quaas E, Haag R, Wiehe A. Hyperbranched Polyglycerol Loaded with (Zinc-)Porphyrins: Photosensitizer Release Under Reductive and Acidic Conditions for Improved Photodynamic Therapy. Biomacromolecules 2017; 19:222-238. [DOI: 10.1021/acs.biomac.7b01485] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Michael H. Staegemann
- Institut
für Chemie und Biochemie, Freie Universität Berlin, Takustr. 3, D-14195 Berlin, Germany
- Biolitec Research GmbH, Otto-Schott-Str.
15, D-07745 Jena, Germany
| | - Susanna Gräfe
- Biolitec Research GmbH, Otto-Schott-Str.
15, D-07745 Jena, Germany
| | - Burkhard Gitter
- Biolitec Research GmbH, Otto-Schott-Str.
15, D-07745 Jena, Germany
| | - Katharina Achazi
- Institut
für Chemie und Biochemie, Freie Universität Berlin, Takustr. 3, D-14195 Berlin, Germany
| | - Elisa Quaas
- Institut
für Chemie und Biochemie, Freie Universität Berlin, Takustr. 3, D-14195 Berlin, Germany
| | - Rainer Haag
- Institut
für Chemie und Biochemie, Freie Universität Berlin, Takustr. 3, D-14195 Berlin, Germany
| | - Arno Wiehe
- Institut
für Chemie und Biochemie, Freie Universität Berlin, Takustr. 3, D-14195 Berlin, Germany
- Biolitec Research GmbH, Otto-Schott-Str.
15, D-07745 Jena, Germany
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49
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Bernard S, Audisio D, Riomet M, Bregant S, Sallustrau A, Plougastel L, Decuypere E, Gabillet S, Kumar RA, Elyian J, Trinh MN, Koniev O, Wagner A, Kolodych S, Taran F. Bioorthogonal Click and Release Reaction of Iminosydnones with Cycloalkynes. Angew Chem Int Ed Engl 2017; 56:15612-15616. [DOI: 10.1002/anie.201708790] [Citation(s) in RCA: 72] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2017] [Indexed: 12/21/2022]
Affiliation(s)
- Sabrina Bernard
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Davide Audisio
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Margaux Riomet
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Sarah Bregant
- Service d'Ingénierie Moléculaire des Protéines, DRF-JOLIOT-SIMOPRO, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Antoine Sallustrau
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Lucie Plougastel
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Elodie Decuypere
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Sandra Gabillet
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Ramar Arun Kumar
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Jijy Elyian
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Minh Nguyet Trinh
- Laboratory of Functional Chemo-Systems UMR 7199 CNRS-UdS; 67401 Illkirch France
| | - Oleksandr Koniev
- Syndivia SAS, 650 Boulevard Gonthier d'Andernach; 67400 Illkirch France
| | - Alain Wagner
- Laboratory of Functional Chemo-Systems UMR 7199 CNRS-UdS; 67401 Illkirch France
| | - Sergii Kolodych
- Syndivia SAS, 650 Boulevard Gonthier d'Andernach; 67400 Illkirch France
| | - Frédéric Taran
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
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50
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Bernard S, Audisio D, Riomet M, Bregant S, Sallustrau A, Plougastel L, Decuypere E, Gabillet S, Kumar RA, Elyian J, Trinh MN, Koniev O, Wagner A, Kolodych S, Taran F. Bioorthogonal Click and Release Reaction of Iminosydnones with Cycloalkynes. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201708790] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Sabrina Bernard
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Davide Audisio
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Margaux Riomet
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Sarah Bregant
- Service d'Ingénierie Moléculaire des Protéines, DRF-JOLIOT-SIMOPRO, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Antoine Sallustrau
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Lucie Plougastel
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Elodie Decuypere
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Sandra Gabillet
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Ramar Arun Kumar
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Jijy Elyian
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
| | - Minh Nguyet Trinh
- Laboratory of Functional Chemo-Systems UMR 7199 CNRS-UdS; 67401 Illkirch France
| | - Oleksandr Koniev
- Syndivia SAS, 650 Boulevard Gonthier d'Andernach; 67400 Illkirch France
| | - Alain Wagner
- Laboratory of Functional Chemo-Systems UMR 7199 CNRS-UdS; 67401 Illkirch France
| | - Sergii Kolodych
- Syndivia SAS, 650 Boulevard Gonthier d'Andernach; 67400 Illkirch France
| | - Frédéric Taran
- Service de Chimie Bio-organique et Marquage, DRF-JOLIOT-SCBM, CEA; Université Paris-Saclay; 91191 Gif-sur-Yvette France
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