1
|
Karak M, Acosta JAM, Cortez-Hernandez HF, Cardona JL, Forlani G, Barbosa LCA. Natural Rubrolides and Their Synthetic Congeners as Inhibitors of the Photosynthetic Electron Transport Chain. JOURNAL OF NATURAL PRODUCTS 2024; 87:2272-2280. [PMID: 39240232 DOI: 10.1021/acs.jnatprod.4c00714] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/07/2024]
Abstract
Rubrolides are a family of naturally occurring 5-benzylidenebutenolides, which generally contain brominated phenol groups, and nearly half of them also present a chlorine attached to the butenolide core. Seven natural rubrolides were previously synthesized. When these compounds were tested against the model plant Raphanus sativus, six were found to exert a slight inhibition on plant growth. Aiming to exploit their scaffold as a model for the synthesis of new compounds targeting photosynthesis, nine new rubrolide analogues were prepared. The synthesis was accomplished in 2-4 steps with a 10-39% overall yield from 3,4-dichlorofuran-2(5H)-one. All compounds were evaluated for their ability to inhibit the whole Hill reaction or excluding photosystem I (PSI). Several natural rubrolides and their analogues displayed good inhibitory potential (IC50 = 2-8 μM). Molecular docking studies on the photosystem II-light harvesting complex II (PSII-LHCII supercomplex) binding site were also performed. Overall, data support the use of rubrolides as a model for the development of new active principles targeting the photosynthetic electron transport chain to be used as herbicides.
Collapse
Affiliation(s)
- Milandip Karak
- Department of Chemistry, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos, 6627, Campus Pampulha, CEP 31270-901 Belo Horizonte, MG, Brazil
| | - Jaime A M Acosta
- Department of Chemistry, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos, 6627, Campus Pampulha, CEP 31270-901 Belo Horizonte, MG, Brazil
| | - Héctor F Cortez-Hernandez
- School of Chemical Technology, Faculty of Technology, Universidad Tecnológica de Pereira, Carrera 27 #10-02, Barrio Álamos, Código, 660003 Pereira, Risaralda, Colombia
| | - Johnny L Cardona
- School of Chemical Technology, Faculty of Technology, Universidad Tecnológica de Pereira, Carrera 27 #10-02, Barrio Álamos, Código, 660003 Pereira, Risaralda, Colombia
| | - Giuseppe Forlani
- Department of Life Science and Biotechnology, Università di Ferrara, via L. Borsari 46, I-44121 Ferrara, Italy
| | - Luiz C A Barbosa
- Department of Chemistry, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos, 6627, Campus Pampulha, CEP 31270-901 Belo Horizonte, MG, Brazil
| |
Collapse
|
2
|
Gopalakrishnan DK, Panigrahi S, Sen R, Vaitla J. Ir(I)-Catalyzed Synthesis of Furanones from Vinyl Sulfoxonium Ylides. Org Lett 2023; 25:1519-1524. [PMID: 36826389 DOI: 10.1021/acs.orglett.3c00303] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/25/2023]
Abstract
A method for the synthesis of allyl substituted γ-butenolides via carbonyl ylide rearrangement of vinyl sulfoxonium ylide-derived carbenes has been developed. At rt, the mechanism involves a carbonyl ylide generation/allyloxy furan formation/[3,3]-sigmatropic rearrangement/isomerization sequence for the generation of 3-allyl butenolides. At 70 °C, instead of the final isomerization step, the resulting [3,3]-sigmatropic rearrangement product undergoes further [3,3]-sigmatropic rearrangement to produce 5-allyl butenolide. In the absence of the catalyst, the reaction affords a diene via [2,3]-sigmatropic rearrangement.
Collapse
Affiliation(s)
| | - Sourav Panigrahi
- Department of Chemistry, Indian Institute of Technology Delhi, Hauz Khas, New Delhi, 110016, India
| | - Raju Sen
- Department of Chemistry, Indian Institute of Technology Delhi, Hauz Khas, New Delhi, 110016, India
| | - Janakiram Vaitla
- Department of Chemistry, Indian Institute of Technology Delhi, Hauz Khas, New Delhi, 110016, India
| |
Collapse
|
3
|
Gribble GW. Naturally Occurring Organohalogen Compounds-A Comprehensive Review. PROGRESS IN THE CHEMISTRY OF ORGANIC NATURAL PRODUCTS 2023; 121:1-546. [PMID: 37488466 DOI: 10.1007/978-3-031-26629-4_1] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/26/2023]
Abstract
The present volume is the third in a trilogy that documents naturally occurring organohalogen compounds, bringing the total number-from fewer than 25 in 1968-to approximately 8000 compounds to date. Nearly all of these natural products contain chlorine or bromine, with a few containing iodine and, fewer still, fluorine. Produced by ubiquitous marine (algae, sponges, corals, bryozoa, nudibranchs, fungi, bacteria) and terrestrial organisms (plants, fungi, bacteria, insects, higher animals) and universal abiotic processes (volcanos, forest fires, geothermal events), organohalogens pervade the global ecosystem. Newly identified extraterrestrial sources are also documented. In addition to chemical structures, biological activity, biohalogenation, biodegradation, natural function, and future outlook are presented.
Collapse
Affiliation(s)
- Gordon W Gribble
- Department of Chemistry, Dartmouth College, Hanover, NH, 03755, USA.
| |
Collapse
|
4
|
Chatterjee S, Sahoo R, Nanda S. Recent reports on the synthesis of γ-butenolide, γ-alkylidenebutenolide frameworks, and related natural products. Org Biomol Chem 2021; 19:7298-7332. [PMID: 34612357 DOI: 10.1039/d1ob00875g] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
γ-Butenolides are fundamental frameworks found in many naturally occurring compounds, and they exhibit tremendous biological activities. γ-Butenolides also have proven their potential as useful synthetic intermediates in the total synthesis of natural compounds. Over the years, many γ-butenolide natural products have been isolated, having exocyclic γ-δ unsaturation in their structure. These natural products are collectively referred to as γ-alkylidenebutenolides. Considering the different biological profiles and wide-ranging structural diversity of the optically active γ-butenolide, the development of synthetic strategies for assembling such challenging scaffolds has attracted significant attention from synthetic chemists in recent times. In this report, a brief discussion will be provided to address isolation, biogenesis, and current state-of-the-art synthetic protocols for such molecules. This report aims to focus on synthetic strategies for γ-butenolides from 2010-2020 with a particular emphasis on γ-alkylidenebutenolides and related molecules. Metal-mediated catalytic transformation and organocatalysis are the two main reaction types that have been widely used to access such molecules. Mechanistic considerations, enantioselective synthesis, and practical applications of the reported procedures are also taken into consideration.
Collapse
Affiliation(s)
- Shrestha Chatterjee
- Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, 721302, India.
| | | | | |
Collapse
|
5
|
Vries J, Assmann M, Janneschütz J, Krauß J, Gudzuhn M, Stanelle‐Bertram S, Gabriel G, Streit WR, Schützenmeister N. Synthesis of Natural Rubrolides B, I, K, L, M, O and Analogues. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100526] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Jessica Vries
- Department of Chemistry Institute of Pharmacy Universität Hamburg Bundesstrasse 45 20146 Hamburg Germany
| | - Maik Assmann
- Department of Chemistry Institute of Pharmacy Universität Hamburg Bundesstrasse 45 20146 Hamburg Germany
| | - Jasmin Janneschütz
- Department of Chemistry Institute of Pharmacy Universität Hamburg Bundesstrasse 45 20146 Hamburg Germany
| | - Judith Krauß
- Department of Chemistry Institute of Pharmacy Universität Hamburg Bundesstrasse 45 20146 Hamburg Germany
| | - Mirja Gudzuhn
- Department of Microbiology and Biotechnology Universität Hamburg Ohnhorststrasse 18 22609 Hamburg Germany
| | - Stephanie Stanelle‐Bertram
- Heinrich-Pette-Institute Leibniz Institute for Experimental Virology Martinistrasse 52 20251 Hamburg Germany
| | - Gülsah Gabriel
- Heinrich-Pette-Institute Leibniz Institute for Experimental Virology Martinistrasse 52 20251 Hamburg Germany
- Institute for Virology University for Veterinary Medicine Hannover Buenteweg 17 30559 Hannover Germany
| | - Wolfgang R. Streit
- Department of Microbiology and Biotechnology Universität Hamburg Ohnhorststrasse 18 22609 Hamburg Germany
| | - Nina Schützenmeister
- Department of Pharmaceutical Chemistry University of Vienna Althanstrasse 14 1090 Vienna Austria
| |
Collapse
|
6
|
Bracegirdle J, Keyzers RA. Marine-derived Polyaromatic Butenolides - Isolation, Synthesis and Biological Evaluations. Curr Pharm Des 2020; 26:4351-4361. [DOI: 10.2174/1381612826666200518110617] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2020] [Accepted: 04/16/2020] [Indexed: 11/22/2022]
Abstract
Marine invertebrates, especially tunicates, are a lucrative resource for the discovery of new lead compounds
for the development of clinically utilized drugs. This review describes the isolation, synthesis and biological
activities of several classes of marine-derived butenolide natural products, namely rubrolides and related
cadiolides and prunolides. All relevant studies pertaining to these compounds up to the end of 2019 are included.
Collapse
Affiliation(s)
- Joe Bracegirdle
- School of Chemical and Physical Sciences, and Centre for Biodiscovery, Victoria University of Wellington, Wellington 6012, New Zealand
| | - Robert A. Keyzers
- School of Chemical and Physical Sciences, and Centre for Biodiscovery, Victoria University of Wellington, Wellington 6012, New Zealand
| |
Collapse
|
7
|
Curti C, Battistini L, Sartori A, Zanardi F. New Developments of the Principle of Vinylogy as Applied to π-Extended Enolate-Type Donor Systems. Chem Rev 2020; 120:2448-2612. [PMID: 32040305 PMCID: PMC7993750 DOI: 10.1021/acs.chemrev.9b00481] [Citation(s) in RCA: 102] [Impact Index Per Article: 25.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Indexed: 12/19/2022]
Abstract
The principle of vinylogy states that the electronic effects of a functional group in a molecule are possibly transmitted to a distal position through interposed conjugated multiple bonds. As an emblematic case, the nucleophilic character of a π-extended enolate-type chain system may be relayed from the legitimate α-site to the vinylogous γ, ε, ..., ω remote carbon sites along the chain, provided that suitable HOMO-raising strategies are adopted to transform the unsaturated pronucleophilic precursors into the reactive polyenolate species. On the other hand, when "unnatural" carbonyl ipso-sites are activated as nucleophiles (umpolung), vinylogation extends the nucleophilic character to "unnatural" β, δ, ... remote sites. Merging the principle of vinylogy with activation modalities and concepts such as iminium ion/enamine organocatalysis, NHC-organocatalysis, cooperative organo/metal catalysis, bifunctional organocatalysis, dicyanoalkylidene activation, and organocascade reactions represents an impressive step forward for all vinylogous transformations. This review article celebrates this evolutionary progress, by collecting, comparing, and critically describing the achievements made over the nine year period 2010-2018, in the generation of vinylogous enolate-type donor substrates and their use in chemical synthesis.
Collapse
Affiliation(s)
| | | | | | - Franca Zanardi
- Dipartimento di Scienze degli
Alimenti e del Farmaco, Università
di Parma, Parco Area delle Scienze 27A, 43124 Parma, Italy
| |
Collapse
|
8
|
Acosta JA, Karak M, Barbosa LC, Boukouvalas J, Straforini A, Forlani G. Synthesis of new tetronamides displaying inhibitory activity against bloom-forming cyanobacteria. PEST MANAGEMENT SCIENCE 2020; 76:779-788. [PMID: 31397956 DOI: 10.1002/ps.5580] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2019] [Revised: 07/16/2019] [Accepted: 07/29/2019] [Indexed: 06/10/2023]
Abstract
BACKGROUND The increasing frequency and intensity of cyanobacterial blooms pose a serious threat to aquatic ecosystems. These blooms produce potent toxins that can contaminate drinking water and endanger the life of wild and domestic animals as well as humans. Consequently, the development of effective methods for their control is a matter of high priority. We have previously shown that some γ-benzylidenebutenolides, related to the rubrolide family of natural products, are capable of inhibiting the photosynthetic electron transport chain (Hill reaction), a target of commercial herbicides. Here we report the synthesis and biological properties of a new class of rubrolide-inspired molecules featuring a tetronamide motif. RESULTS A total of 47 N-aryl tetronamides, including 38 aldol adducts, were prepared bearing phenyl, biphenyl, naphthyl, aliphatic and heteroaromatic groups. Some of the aldol adducts were dehydrated to the corresponding γ-benzylidenetetronamides, although satisfactory yields were obtained in only three cases (52-97%). None of the synthesized compounds were capable of blocking the Hill reaction. This notwithstanding, several aldol adducts equipped with a biphenyl substituent displayed excellent inhibitory activity against Synechococcus elongatus and other cyanobacterial strains (IC50 = 1-5 μM). Further, these tetronamides were found to be essentially inactive against eukaryotic microorganisms. CONCLUSION Several newly synthesized biphenyl-containing tetronamides were shown to display potent and selective inhibitory activity against cyanobacteria. These compounds appear to exert their biological effects without interfering with the Hill reaction. As such, they represent novel leads in the search of environmentally benign agents for controlling cyanobacterial blooms. © 2019 Society of Chemical Industry.
Collapse
Affiliation(s)
- Jaime Am Acosta
- Department of Chemistry, Federal University of Minas Gerais, Belo Horizonte, Brazil
| | - Milandip Karak
- Department of Chemistry, Federal University of Viçosa, Viçosa, Brazil
| | - Luiz Ca Barbosa
- Department of Chemistry, Federal University of Minas Gerais, Belo Horizonte, Brazil
- Department of Chemistry, Federal University of Viçosa, Viçosa, Brazil
| | - John Boukouvalas
- Department of Chemistry, Pavillon Alexandre-Vachon, Université Laval, Quebec, Canada
| | - Andrea Straforini
- Department of Life Science and Biotechnology, University of Ferrara, Ferrara, Italy
| | - Giuseppe Forlani
- Department of Life Science and Biotechnology, University of Ferrara, Ferrara, Italy
| |
Collapse
|
9
|
Moreira TA, Lafleur-Lambert R, Barbosa LC, Boukouvalas J. Concise, stereocontrolled and modular syntheses of the anti-influenza rubrolides R and S. Tetrahedron Lett 2019. [DOI: 10.1016/j.tetlet.2019.151307] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
|
10
|
Mairink SZ, Barbosa LCA, Boukouvalas J, Pedroso SHSP, Santos SG, Magalhães PP, Farias LM. Synthesis and evaluation of cadiolide analogues as inhibitors of bacterial biofilm formation. Med Chem Res 2018. [DOI: 10.1007/s00044-018-2246-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
|
11
|
Taheri Kal Koshvandi A, Heravi MM, Momeni T. Current Applications of Suzuki–Miyaura Coupling Reaction in The Total Synthesis of Natural Products: An update. Appl Organomet Chem 2018. [DOI: 10.10.1002/aoc.4210] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
| | | | - Tayebeh Momeni
- Department of ChemistryAlzahra University Vanak Tehran Iran
| |
Collapse
|
12
|
Taheri Kal Koshvandi A, Heravi MM, Momeni T. Current Applications of Suzuki–Miyaura Coupling Reaction in The Total Synthesis of Natural Products: An update. Appl Organomet Chem 2018. [DOI: 10.1002/aoc.4210] [Citation(s) in RCA: 99] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
| | | | - Tayebeh Momeni
- Department of ChemistryAlzahra University Vanak Tehran Iran
| |
Collapse
|
13
|
Shabeer M, Barbosa LCA, Karak M, Coelho ACS, Takahashi JA. Thiobarbiturates as potential antifungal agents to control human infections caused by Candida and Cryptococcus species. Med Chem Res 2018. [DOI: 10.1007/s00044-017-2126-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
14
|
Palladium-catalyzed hydrodehalogenation of butenolides: An efficient and sustainable access to β-arylbutenolides. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2017.06.016] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
|
15
|
Schacht M, Boehlich GJ, de Vries J, Bertram S, Gabriel G, Zimmermann P, Heisig P, Schützenmeister N. Protecting-Group-Free Total Syntheses of Rubrolide R and S. European J Org Chem 2017. [DOI: 10.1002/ejoc.201700158] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Affiliation(s)
- Mathias Schacht
- Department of Chemistry; Institute of Pharmacy; Universität Hamburg; Bundesstrasse 45 20146 Hamburg Germany
| | - Gordon Jacob Boehlich
- Department of Chemistry; Institute of Pharmacy; Universität Hamburg; Bundesstrasse 45 20146 Hamburg Germany
| | - Jessica de Vries
- Department of Chemistry; Institute of Pharmacy; Universität Hamburg; Bundesstrasse 45 20146 Hamburg Germany
| | - Stephanie Bertram
- Heinrich-Pette-Institute; Leibniz Institute for Experimental Virology; Martinistrasse 52 20251 Hamburg Germany
- Centre for Structural and Cell Biology in Medicine; University of Lübeck; Ratzeburger Allee 160 23562 Lübeck Germany
| | - Gülsah Gabriel
- Heinrich-Pette-Institute; Leibniz Institute for Experimental Virology; Martinistrasse 52 20251 Hamburg Germany
- Centre for Structural and Cell Biology in Medicine; University of Lübeck; Ratzeburger Allee 160 23562 Lübeck Germany
| | - Phyllis Zimmermann
- Department of Chemistry; Institute of Biochemistry and Molecular Biology; University of Hamburg; Bundesstrasse 45 20146 Hamburg Germany
| | - Peter Heisig
- Centre for Structural and Cell Biology in Medicine; University of Lübeck; Ratzeburger Allee 160 23562 Lübeck Germany
| | - Nina Schützenmeister
- Department of Chemistry; Institute of Pharmacy; Universität Hamburg; Bundesstrasse 45 20146 Hamburg Germany
| |
Collapse
|
16
|
Damodar K, Kim JK, Jun JG. Efficient, collective synthesis and nitric oxide inhibitory activity of rubrolides E, F, R, S and their derivatives. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2016.11.096] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
|