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Makrinich M, Nimerovsky E, Goldbourt A. Pushing the limit of NMR-based distance measurements - retrieving dipolar couplings to spins with extensively large quadrupolar frequencies. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2018; 92:19-24. [PMID: 29751342 DOI: 10.1016/j.ssnmr.2018.04.001] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Revised: 04/09/2018] [Accepted: 04/09/2018] [Indexed: 06/08/2023]
Abstract
Dipolar recoupling under magic-angle spinning allows to measure accurate inter-nuclear distances provided that the two interacting spins can be efficiently and uniformly excited. Alexander (Lex) Vega has shown that adiabatic transfers of populations in quadrupolar spins during the application of constant-wave (cw) radio-frequency pulses lead to efficient and quantifiable dipolar recoupling curves. Accurate distance determination within and beyond the adiabatic regime using cw pulses is limited by the size of the quadrupolar coupling constant. Here we show that using the approach of long-pulse phase modulation, dipolar recoupling and accurate distances can be obtained for nuclei having extensively large quadrupolar frequencies of 5-10 MHz. We demonstrate such results by obtaining a 31P-79/81Br distance in a compound for which bromine-79 (spin-3/2) has a quadrupolar coupling constant of 11.3 MHz, and a 13C-209Bi distance where the bismuth (spin-9/2) has a quadrupolar coupling constant of 256 MHz, equaling a quadrupolar frequency of 10.7 MHz. For Bromine, we demonstrate that an analytical curve based on the assumption of complete spin saturation fits the data. In the case of bismuth acetate, a C-Bi3 spin system must be used in order to match the correct saturation recoupling curve, and results are in agreement with the crystallographic structure.
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Affiliation(s)
- M Makrinich
- School of Chemistry, Tel Aviv University, Tel Aviv, 69978, Israel
| | - E Nimerovsky
- School of Chemistry, Tel Aviv University, Tel Aviv, 69978, Israel
| | - A Goldbourt
- School of Chemistry, Tel Aviv University, Tel Aviv, 69978, Israel.
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Makrinich M, Gupta R, Polenova T, Goldbourt A. Saturation capability of short phase modulated pulses facilitates the measurement of longitudinal relaxation times of quadrupolar nuclei. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2017; 84:196-203. [PMID: 28473217 DOI: 10.1016/j.ssnmr.2017.04.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2017] [Revised: 04/17/2017] [Accepted: 04/18/2017] [Indexed: 06/07/2023]
Abstract
The ability of various pulse types, which are commonly applied for distance measurements, to saturate or invert quadrupolar spin polarization has been compared by observing their effect on magnetization recovery curves under magic-angle spinning. A selective central transition inversion pulse yields a bi-exponential recovery for a diamagnetic sample with a spin-3/2, consistent with the existence of two processes: the fluctuations of the electric field gradients with identical single (W1) and double (W2) quantum quadrupolar-driven relaxation rates, and spin exchange between the central transition of one spin and satellite transitions of a dipolar-coupled similar spin. Using a phase modulated pulse, developed for distance measurements in quadrupolar spins (Nimerovsky et al., JMR 244, 2014, 107-113) and suggested for achieving the complete saturation of all quadrupolar spin energy levels, a mono-exponential relaxation model fits the data, compatible with elimination of the spin exchange processes. Other pulses such as an adiabatic pulse lasting one-third of a rotor period, and a two-rotor-period long continuous-wave pulse, both used for distance measurements under special experimental conditions, yield good fits to bi-exponential functions with varying coefficients and time constants due to variations in initial conditions. Those values are a measure of the extent of saturation obtained from these pulses. An empirical fit of the recovery curves to a stretched exponential function can provide general recovery times. A stretching parameter very close to unity, as obtained for a phase modulated pulse but not for other cases, suggests that in this case recovery times and longitudinal relaxation times are similar. The results are experimentally demonstrated for compounds containing 11B (spin-3/2) and 51V (spin-7/2). We propose that accurate spin lattice relaxation rates can be measured by a short phase modulated pulse (<1-2ms), similarly to the "true T1" measured by saturation with an asynchronous pulse train (Yesinowski, JMR 252, 2015, 135-144).
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Affiliation(s)
- Maria Makrinich
- School of Chemistry, Tel Aviv University, Ramat Aviv 69978, Tel Aviv, Israel
| | - Rupal Gupta
- Department of Chemistry and Biochemistry, University of Delaware, Newark, DE 19716, United States
| | - Tatyana Polenova
- Department of Chemistry and Biochemistry, University of Delaware, Newark, DE 19716, United States
| | - Amir Goldbourt
- School of Chemistry, Tel Aviv University, Ramat Aviv 69978, Tel Aviv, Israel.
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Perras FA. Quantitative structure parameters from the NMR spectroscopy of quadrupolar nuclei. PURE APPL CHEM 2016. [DOI: 10.1515/pac-2015-0801] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
AbstractNuclear magnetic resonance (NMR) spectroscopy is one of the most important characterization tools in chemistry, however, 3/4 of the NMR active nuclei are underutilized due to their quadrupolar nature. This short review centers on the development of methods that use solid-state NMR of quadrupolar nuclei for obtaining quantitative structural information. Namely, techniques using dipolar recoupling as well as the resolution afforded by double-rotation are presented for the measurement of spin–spin coupling between quadrupoles, enabling the measurement of internuclear distances and connectivities. Two-dimensional J-resolved-type experiments are then presented for the measurement of dipolar and J coupling, between spin-1/2 and quadrupolar nuclei as well as in pairs of quadrupolar nuclei. Select examples utilizing these techniques for the extraction of structural information are given. Techniques are then described that enable the fine refinement of crystalline structures using solely the electric field gradient tensor, measured using NMR, as a constraint. These approaches enable the solution of crystal structures, from polycrystalline compounds, that are of comparable quality to those solved using single-crystal diffraction.
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Affiliation(s)
- Frédéric A. Perras
- 1Ames Laboratory, Iowa State University, 211 Spedding Hall, Ames, IA 50011-3020, USA
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Shen M, Trébosc J, Lafon O, Gan Z, Pourpoint F, Hu B, Chen Q, Amoureux JP. Solid-state NMR indirect detection of nuclei experiencing large anisotropic interactions using spinning sideband-selective pulses. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2015; 72:104-117. [PMID: 26411981 DOI: 10.1016/j.ssnmr.2015.09.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2015] [Revised: 09/04/2015] [Accepted: 09/04/2015] [Indexed: 06/05/2023]
Abstract
Under Magic-Angle Spinning (MAS), a long radio-frequency (rf) pulse applied on resonance achieves the selective excitation of the center-band of a wide NMR spectrum. We show herein that these rf pulses can be applied on the indirect channel of Hetero-nuclear Multiple-Quantum Correlation (HMQC) sequences, which facilitate the indirect detection via spin-1/2 isotopes of nuclei exhibiting wide spectra. Numerical simulations show that this indirect excitation method is applicable to spin-1/2 nuclei experiencing a large chemical shift anisotropy, as well as to spin-1 isotopes subject to a large quadrupole interaction, such as (14)N. The performances of the long pulses are analyzed by the numerical simulations of scalar-mediated HMQC (J-HMQC) experiments indirectly detecting spin-1/2 or spin-1 nuclei, as well as by dipolar-mediated HMQC (D-HMQC) experiments achieving indirect detection of (14)N nuclei via (1)H in crystalline γ-glycine and N-acetyl-valine samples at a MAS frequency of 60kHz. We show on these solids that for the acquisition of D-HMQC spectra between (1)H and (14)N nuclei, the efficiency of selective moderate excitation with long-pulses at the (14)N Larmor frequency, ν0((14)N), is comparable to those with strong excitation pulses at ν0((14)N) or 2ν0((14)N) frequencies, given the rf field delivered by common solid-state NMR probes. Furthermore, the D-HMQC experiments also demonstrate that the use of long pulses does not produce significant spectral distortions along the (14)N dimension. In summary, the use of center-band selective weak pulses is advantageous for HMQC experiments achieving the indirect detection of wide spectra since it (i) requires a moderate rf field, (ii) can be easily optimized, (iii) displays a high robustness to CSAs, offsets, rf-field inhomogeneities, and fluctuations in MAS frequency, and (iv) is little dependent on the quadrupolar coupling constant.
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Affiliation(s)
- Ming Shen
- UCCS, CNRS, UMR 8181, University of Lille, Villeneuve d'Ascq 59652, France; Physics Department & Shanghai Key Laboratory of Magnetic Resonance, East China Normal University, Shanghai 200062, China
| | - Julien Trébosc
- UCCS, CNRS, UMR 8181, University of Lille, Villeneuve d'Ascq 59652, France
| | - Olivier Lafon
- UCCS, CNRS, UMR 8181, University of Lille, Villeneuve d'Ascq 59652, France.
| | - Zhehong Gan
- Center of Interdisciplinary Magnetic Resonance, NHMFL, Tallahassee, FL 32310, USA
| | | | - Bingwen Hu
- Physics Department & Shanghai Key Laboratory of Magnetic Resonance, East China Normal University, Shanghai 200062, China
| | - Qun Chen
- Physics Department & Shanghai Key Laboratory of Magnetic Resonance, East China Normal University, Shanghai 200062, China
| | - Jean-Paul Amoureux
- UCCS, CNRS, UMR 8181, University of Lille, Villeneuve d'Ascq 59652, France; Physics Department & Shanghai Key Laboratory of Magnetic Resonance, East China Normal University, Shanghai 200062, China.
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Haimovich A, Goldbourt A. Characterization of lithium coordination sites with magic-angle spinning NMR. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2015; 254:131-138. [PMID: 25899290 DOI: 10.1016/j.jmr.2015.02.003] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2014] [Revised: 01/28/2015] [Accepted: 02/07/2015] [Indexed: 06/04/2023]
Abstract
Lithium, in the form of lithium carbonate, is one of the most common drugs for bipolar disorder. Lithium is also considered to have an effect on many other cellular processes hence it possesses additional therapeutic as well as side effects. In order to quantitatively characterize the binding mode of lithium, it is required to identify the interacting species and measure their distances from the metal center. Here we use magic-angle spinning (MAS) solid-state NMR to study the binding site of lithium in complex with glycine and water (LiGlyW). Such a compound is a good enzyme mimetic since lithium is four-coordinated to one water molecule and three carboxylic groups. Distance measurements to carbons are performed using a 2D transferred echo double resonance (TEDOR) MAS solid-state NMR experiment, and water binding is probed by heteronuclear high-resolution proton-lithium and proton-carbon correlation (wPMLG-HETCOR) experiments. Both HETCOR experiments separate the main complex from impurities and non-specifically bound lithium species, demonstrating the sensitivity of the method to probe the species in the binding site. Optimizations of the TEDOR pulse scheme in the case of a quadrupolar nucleus with a small quadrupole coupling constant show that it is most efficient when pulses are positioned on the spin-1/2 (carbon-13) nucleus. Since the intensity of the TEDOR signal is not normalized, careful data analysis that considers both intensity and dipolar oscillations has to be performed. Nevertheless we show that accurate distances can be extracted for both carbons of the bound glycine and that these distances are consistent with the X-ray data and with lithium in a tetrahedral environment. The lithium environment in the complex is very similar to the binding site in inositol monophosphatase, an enzyme associated with bipolar disorder and the putative target for lithium therapy. A 2D TEDOR experiment applied to the bacterial SuhB gene product of this enzyme was designed to probe direct correlations between lithium, the enzyme inhibitor, and the closest carboxyl carbons of the binding site. At this point, the chemical shift of the bound carboxyl groups in this 29 kDa enzyme could be determined.
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Affiliation(s)
- A Haimovich
- School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Ramat Aviv 69978, Tel Aviv, Israel
| | - A Goldbourt
- School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Ramat Aviv 69978, Tel Aviv, Israel.
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Nimerovsky E, Gupta R, Yehl J, Li M, Polenova T, Goldbourt A. Phase-modulated LA-REDOR: a robust, accurate and efficient solid-state NMR technique for distance measurements between a spin-1/2 and a quadrupole spin. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2014; 244:107-113. [PMID: 24745816 DOI: 10.1016/j.jmr.2014.03.003] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2014] [Revised: 02/26/2014] [Accepted: 03/04/2014] [Indexed: 06/03/2023]
Abstract
Distances between a spin-1/2 and a spin>1/2 can be efficiently measured by a variety of magic-angle spinning solid state NMR methods such as Rotational Echo Adiabatic Passage Double Resonance (REAPDOR), Low-Alpha/Low-Amplitude REDOR (LA-REDOR) and Rotational-Echo Saturation-Pulse Double-Resonance (R/S-RESPDOR). In this manuscript we show that the incorporation of a phase modulation into a long quadrupolar recoupling pulse, lasting 10 rotor periods that are sandwiched between rotor-synchronized pairs of dipolar recoupling π pulses, extends significantly the range of the values of the quadrupole moments that can be accessed by the experiment. We show by a combination of simulations and experiments that the new method, phase-modulated LA-REDOR, is very weakly dependent on the actual value of the radio-frequency field, and is highly robust with respect to off-resonance irradiation. The experimental results can be fitted by numerical simulations or using a universal formula corresponding to an equal-transition-probability model. Phase-modulated LA-REDOR (13)C{(11)B} and (15)N{(51)V} dipolar recoupling experiments confirm the accuracy and applicability of this new method.
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Affiliation(s)
- Evgeny Nimerovsky
- School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel
| | - Rupal Gupta
- Department of Chemistry and Biochemistry, University of Delaware, Newark, DE 19716, USA
| | - Jenna Yehl
- Department of Chemistry and Biochemistry, University of Delaware, Newark, DE 19716, USA
| | - Mingyue Li
- Department of Chemistry and Biochemistry, University of Delaware, Newark, DE 19716, USA
| | - Tatyana Polenova
- Department of Chemistry and Biochemistry, University of Delaware, Newark, DE 19716, USA
| | - Amir Goldbourt
- School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel.
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