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Kelly CL, Manning C, Frey C, Kaiser J, Gluschankoff N, Casciotti KL. Pyisotopomer: A Python package for obtaining intramolecular isotope ratio differences from mass spectrometric analysis of nitrous oxide isotopocules. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2023; 37:e9513. [PMID: 36971184 DOI: 10.1002/rcm.9513] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Revised: 03/21/2023] [Accepted: 03/23/2023] [Indexed: 05/16/2023]
Abstract
RATIONALE Obtaining nitrous oxide isotopocule measurements with isotope ratio mass spectrometry (IRMS) involves analyzing the ion current ratios of the nitrous oxide parent ion (N2 O+ ) as well as those of the NO+ fragment ion. The data analysis requires correcting for "scrambling" in the ion source, whereby the NO+ fragment ion obtains the outer N atom from the N2 O molecule. While descriptions exist for this correction, and interlaboratory intercalibration efforts have been made, there has yet to be published a package of code for implementing isotopomer calibrations. METHODS We developed a user-friendly Python package (pyisotopomer) to determine two coefficients (γ and κ) that describe scrambling in the IRMS ion source, and then used this calibration to obtain intramolecular isotope deltas in N2 O samples. RESULTS With two appropriate reference materials, γ and κ can be determined robustly and accurately for a given IRMS system. An additional third reference material is needed to define the zero-point of the delta scale. We show that IRMS scrambling behavior can vary with time, necessitating regular calibrations. Finally, we present an intercalibration between two IRMS laboratories, using pyisotopomer to calculate γ and κ, and to obtain intramolecular N2 O isotope deltas in lake water unknowns. CONCLUSIONS Given these considerations, we discuss how to use pyisotopomer to obtain high-quality N2 O isotopocule data from IRMS systems, including the use of appropriate reference materials and frequency of calibration.
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Affiliation(s)
- Colette L Kelly
- Department of Earth System Science, Stanford University, Stanford, CA, USA
| | - Cara Manning
- Department of Marine Sciences, University of Connecticut, Groton, CT, USA
| | - Claudia Frey
- Department of Environmental Science, University of Basel, Basel, Switzerland
| | - Jan Kaiser
- Centre for Ocean and Atmospheric Sciences, School of Environmental Sciences, University of East Anglia, Norwich, UK
| | - Noah Gluschankoff
- Department of Earth System Science, Stanford University, Stanford, CA, USA
| | - Karen L Casciotti
- Department of Earth System Science, Stanford University, Stanford, CA, USA
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2
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Mohn J, Biasi C, Bodé S, Boeckx P, Brewer PJ, Eggleston S, Geilmann H, Guillevic M, Kaiser J, Kantnerová K, Moossen H, Müller J, Nakagawa M, Pearce R, von Rein I, Steger D, Toyoda S, Wanek W, Wexler SK, Yoshida N, Yu L. Isotopically characterised N 2 O reference materials for use as community standards. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2022; 36:e9296. [PMID: 35289456 PMCID: PMC9286586 DOI: 10.1002/rcm.9296] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2021] [Revised: 03/08/2022] [Accepted: 03/09/2022] [Indexed: 05/28/2023]
Abstract
RATIONALE Information on the isotopic composition of nitrous oxide (N2 O) at natural abundance supports the identification of its source and sink processes. In recent years, a number of mass spectrometric and laser spectroscopic techniques have been developed and are increasingly used by the research community. Advances in this active research area, however, critically depend on the availability of suitable N2 O isotope Reference Materials (RMs). METHODS Within the project Metrology for Stable Isotope Reference Standards (SIRS), seven pure N2 O isotope RMs have been developed and their 15 N/14 N, 18 O/16 O, 17 O/16 O ratios and 15 N site preference (SP) have been analysed by specialised laboratories against isotope reference materials. A particular focus was on the 15 N site-specific isotopic composition, as this measurand is both highly diagnostic for source appointment and challenging to analyse and link to existing scales. RESULTS The established N2 O isotope RMs offer a wide spread in delta (δ) values: δ15 N: 0 to +104‰, δ18 O: +39 to +155‰, and δ15 NSP : -4 to +20‰. Conversion and uncertainty propagation of δ15 N and δ18 O to the Air-N2 and VSMOW scales, respectively, provides robust estimates for δ15 N(N2 O) and δ18 O(N2 O), with overall uncertainties of about 0.05‰ and 0.15‰, respectively. For δ15 NSP , an offset of >1.5‰ compared with earlier calibration approaches was detected, which should be revisited in the future. CONCLUSIONS A set of seven N2 O isotope RMs anchored to the international isotope-ratio scales was developed that will promote the implementation of the recommended two-point calibration approach. Particularly, the availability of δ17 O data for N2 O RMs is expected to improve data quality/correction algorithms with respect to δ15 NSP and δ15 N analysis by mass spectrometry. We anticipate that the N2 O isotope RMs will enhance compatibility between laboratories and accelerate research progress in this emerging field.
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Affiliation(s)
- Joachim Mohn
- Laboratory for Air Pollution/Environmental TechnologyEmpaDübendorfSwitzerland
| | - Christina Biasi
- Department of Environmental and Biological SciencesUniversity of Eastern FinlandKuopioFinland
| | - Samuel Bodé
- Isotope Bioscience Laboratory – ISOFYS, Department of Green Chemistry and Technology, Faculty of Bioscience EngineeringGhent UniversityGhentBelgium
| | - Pascal Boeckx
- Isotope Bioscience Laboratory – ISOFYS, Department of Green Chemistry and Technology, Faculty of Bioscience EngineeringGhent UniversityGhentBelgium
| | | | - Sarah Eggleston
- Laboratory for Air Pollution/Environmental TechnologyEmpaDübendorfSwitzerland
- PAGES International Project OfficeBernSwitzerland
| | - Heike Geilmann
- Beutenberg CampusMax‐Planck‐Institute for BiogeochemistryJenaGermany
| | - Myriam Guillevic
- Laboratory for Air Pollution/Environmental TechnologyEmpaDübendorfSwitzerland
- Air Pollution Control and Chemicals DivisionFederal Office for the EnvironmentBernSwitzerland
| | - Jan Kaiser
- Centre for Ocean and Atmospheric Sciences, School of Environmental SciencesUniversity of East AngliaNorwichUK
| | - Kristýna Kantnerová
- Laboratory for Air Pollution/Environmental TechnologyEmpaDübendorfSwitzerland
- Thermo Fisher ScientificBremenGermany
| | - Heiko Moossen
- Beutenberg CampusMax‐Planck‐Institute for BiogeochemistryJenaGermany
| | - Joanna Müller
- Laboratory for Air Pollution/Environmental TechnologyEmpaDübendorfSwitzerland
- Plant Protection ChemistryAgroscopeWädenswilSwitzerland
| | - Mayuko Nakagawa
- Earth‐Life Science InstituteTokyo Institute of TechnologyTokyoJapan
| | | | - Isabell von Rein
- Beutenberg CampusMax‐Planck‐Institute for BiogeochemistryJenaGermany
| | - David Steger
- Laboratory for Air Pollution/Environmental TechnologyEmpaDübendorfSwitzerland
| | - Sakae Toyoda
- Department of Chemical Science and Engineering, School of Materials and Chemical TechnologyTokyo Institute of TechnologyYokohamaJapan
| | - Wolfgang Wanek
- Terrestrial Ecosystem Research, Centre for Microbiology and Environmental Systems ScienceUniversity of ViennaViennaAustria
| | - Sarah K. Wexler
- Centre for Ocean and Atmospheric Sciences, School of Environmental SciencesUniversity of East AngliaNorwichUK
| | - Naohiro Yoshida
- Earth‐Life Science InstituteTokyo Institute of TechnologyTokyoJapan
- Department of Chemical Science and Engineering, School of Materials and Chemical TechnologyTokyo Institute of TechnologyYokohamaJapan
| | - Longfei Yu
- Laboratory for Air Pollution/Environmental TechnologyEmpaDübendorfSwitzerland
- Institute of Environment and Ecology, Tsinghua Shenzhen International Graduate School (SIGS)Tsinghua UniversityShenzhenChina
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3
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Lewicka-Szczebak D, Jansen-Willems A, Müller C, Dyckmans J, Well R. Nitrite isotope characteristics and associated soil N transformations. Sci Rep 2021; 11:5008. [PMID: 33658538 PMCID: PMC7930258 DOI: 10.1038/s41598-021-83786-w] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2020] [Accepted: 02/05/2021] [Indexed: 12/02/2022] Open
Abstract
Nitrite (NO2−) is a crucial compound in the N soil cycle. As an intermediate of nearly all N transformations, its isotopic signature may provide precious information on the active pathways and processes. NO2− analyses have already been applied in 15N tracing studies, increasing their interpretation perspectives. Natural abundance NO2− isotope studies in soils were so far not applied and this study aims at testing if such analyses are useful in tracing the soil N cycle. We conducted laboratory soil incubations with parallel natural abundance and 15N treatments, accompanied by isotopic analyses of soil N compounds (NO3−, NO2−, NH4+). The double 15N tracing method was used as a reference method for estimations of N transformation processes based on natural abundance nitrite dynamics. We obtained a very good agreement between the results from nitrite isotope model proposed here and the 15N tracing approach. Natural abundance nitrite isotope studies are a promising tool to our understanding of soil N cycling.
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Affiliation(s)
- Dominika Lewicka-Szczebak
- Centre for Stable Isotope Research and Analysis, University of Göttingen, Göttingen, Germany. .,Laboratory of Isotope Geology and Geoecology, Institute of Geological Sciences, University of Wrocław, Wrocław, Poland.
| | | | - Christoph Müller
- Institute of Plant Ecology, Justus Liebig University, Giessen, Germany.,School of Biology and Environmental Science and Earth Institute, University College Dublin, Belfield, Dublin, Ireland
| | - Jens Dyckmans
- Centre for Stable Isotope Research and Analysis, University of Göttingen, Göttingen, Germany
| | - Reinhard Well
- Thünen-Institut of Climate-Smart Agriculture, Braunschweig, Germany
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Adnew GA, Hofmann ME, Paul D, Laskar A, Surma J, Albrecht N, Pack A, Schwieters J, Koren G, Peters W, Röckmann T. Determination of the triple oxygen and carbon isotopic composition of CO 2 from atomic ion fragments formed in the ion source of the 253 Ultra high-resolution isotope ratio mass spectrometer. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2019; 33:1363-1380. [PMID: 31063233 PMCID: PMC6771542 DOI: 10.1002/rcm.8478] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Revised: 04/18/2019] [Accepted: 04/21/2019] [Indexed: 06/09/2023]
Abstract
RATIONALE Determination of δ17 O values directly from CO2 with traditional gas source isotope ratio mass spectrometry is not possible due to isobaric interference of 13 C16 O16 O on 12 C17 O16 O. The methods developed so far use either chemical conversion or isotope equilibration to determine the δ17 O value of CO2 . In addition, δ13 C measurements require correction for the interference from 12 C17 O16 O on 13 C16 O16 O since it is not possible to resolve the two isotopologues. METHODS We present a technique to determine the δ17 O, δ18 O and δ13 C values of CO2 from the fragment ions that are formed upon electron ionization in the ion source of the Thermo Scientific 253 Ultra high-resolution isotope ratio mass spectrometer (hereafter 253 Ultra). The new technique is compared with the CO2 -O2 exchange method and the 17 O-correction algorithm for δ17 O and δ13 C values, respectively. RESULTS The scale contractions for δ13 C and δ18 O values are slightly larger for fragment ion measurements than for molecular ion measurements. The δ17 O and Δ17 O values of CO2 can be measured on the 17 O+ fragment with an internal error that is a factor 1-2 above the counting statistics limit. The ultimate precision depends on the signal intensity and on the total time that the 17 O+ beam is monitored; a precision of 14 ppm (parts per million) (standard error of the mean) was achieved in 20 hours at the University of Göttingen. The Δ17 O measurements with the O-fragment method agree with the CO2 -O2 exchange method over a range of Δ17 O values of -0.3 to +0.7‰. CONCLUSIONS Isotope measurements on atom fragment ions of CO2 can be used as an alternative method to determine the carbon and oxygen isotopic composition of CO2 without chemical processing or corrections for mass interferences.
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Affiliation(s)
- Getachew A. Adnew
- Institute for Marine and Atmospheric research Utrecht (IMAU)Utrecht UniversityThe Netherlands
| | - Magdalena E.G. Hofmann
- Institute for Marine and Atmospheric research Utrecht (IMAU)Utrecht UniversityThe Netherlands
| | - Dipayan Paul
- Institute for Marine and Atmospheric research Utrecht (IMAU)Utrecht UniversityThe Netherlands
- Centre for Isotope ResearchUniversity of GroningenThe Netherlands
| | - Amzad Laskar
- Institute for Marine and Atmospheric research Utrecht (IMAU)Utrecht UniversityThe Netherlands
| | - Jakub Surma
- Geoscience Center GöttingenGeorg‐August‐University GöttingenGermany
| | - Nina Albrecht
- Geoscience Center GöttingenGeorg‐August‐University GöttingenGermany
| | - Andreas Pack
- Geoscience Center GöttingenGeorg‐August‐University GöttingenGermany
| | | | - Gerbrand Koren
- Department of Meteorology and Air QualityWageningen UniversityThe Netherlands
| | - Wouter Peters
- Centre for Isotope ResearchUniversity of GroningenThe Netherlands
- Department of Meteorology and Air QualityWageningen UniversityThe Netherlands
| | - Thomas Röckmann
- Institute for Marine and Atmospheric research Utrecht (IMAU)Utrecht UniversityThe Netherlands
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5
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Lenhart K, Behrendt T, Greiner S, Steinkamp J, Well R, Giesemann A, Keppler F. Nitrous oxide effluxes from plants as a potentially important source to the atmosphere. THE NEW PHYTOLOGIST 2019; 221:1398-1408. [PMID: 30303249 DOI: 10.1111/nph.15455] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2017] [Accepted: 08/19/2018] [Indexed: 05/12/2023]
Abstract
The global budget for nitrous oxide (N2 O), an important greenhouse gas and probably dominant ozone-depleting substance emitted in the 21st century, is far from being fully understood. Cycling of N2 O in terrestrial ecosystems has traditionally exclusively focused on gas exchange between the soil surface (nitrification-denitrification processes) and the atmosphere. Terrestrial vegetation has not been considered in the global budget so far, even though plants are known to release N2 O. Here, we report the N2 O emission rates of 32 plant species from 22 different families measured under controlled laboratory conditions. Furthermore, the first isotopocule values (δ15 N, δ18 O and δ15 Nsp ) of N2 O emitted from plants were determined. A robust relationship established between N2 O emission and CO2 respiration rates, which did not alter significantly over a broad range of changing environmental conditions, was used to quantify plant-derived emissions on an ecosystem scale. Stable isotope measurements (δ15 N, δ18 O and δ15 Nsp ) of N2 O emitted by plants clearly show that the dual isotopocule fingerprint of plant-derived N2 O differs from that of currently known microbial or chemical processes. Our work suggests that vegetation is a natural source of N2 O in the environment with a large fraction released by a hitherto unrecognized process.
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Affiliation(s)
- Katharina Lenhart
- Bingen University of Applied Sciences, Berlinstr. 109, Bingen, 55411, Germany
- Center for Organismal Studies, Im Neuenheimer Feld 360, Heidelberg, 69120, Germany
- Institute of Earth Sciences, Heidelberg University, Im Neuenheimer Feld 234-236, Heidelberg, D-69120, Germany
| | - Thomas Behrendt
- Max-Planck-Institute for Biogeochemistry, Hans Knöll Str. 10, Jena, 07745, Germany
| | - Steffen Greiner
- Center for Organismal Studies, Im Neuenheimer Feld 360, Heidelberg, 69120, Germany
| | - Jörg Steinkamp
- Biodiversity and Climate Research Centre, Senckenberg Gesellschaft für Naturforschung, Senckenberganlage 25, Frankfurt am Main, 60325, Germany
- Johannes Gutenberg-Universität, Anselm-Franz-von-Bentzel-Weg 12, D-55128 Mainz, Germany
| | - Reinhard Well
- Thünen-Institute of Climate-Smart Agriculture, Bundesallee 50, Braunschweig, D-38116, Germany
| | - Anette Giesemann
- Thünen-Institute of Climate-Smart Agriculture, Bundesallee 50, Braunschweig, D-38116, Germany
| | - Frank Keppler
- Institute of Earth Sciences, Heidelberg University, Im Neuenheimer Feld 234-236, Heidelberg, D-69120, Germany
- Heidelberg Center for the Environment (HCE), Heidelberg University, Heidelberg, D-69120, Germany
- Max-Planck-Institute for Chemistry, Hahn-Meitner-Weg 1, Mainz, D-55128, Germany
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6
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Hyodo A, Malghani S, Zhou Y, Mushinski RM, Toyoda S, Yoshida N, Boutton TW, West JB. Biochar amendment suppresses N 2 O emissions but has no impact on 15 N site preference in an anaerobic soil. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2019; 33:165-175. [PMID: 30304571 DOI: 10.1002/rcm.8305] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2018] [Revised: 10/03/2018] [Accepted: 10/04/2018] [Indexed: 06/08/2023]
Abstract
RATIONALE Biochar amendments often decrease N2 O gas production from soil, but the mechanisms and magnitudes are still not well characterized since N2 O can be produced via several different microbial pathways. We evaluated the influence of biochar amendment on N2 O emissions and N2 O isotopic composition, including 15 N site preference (SP) under anaerobic conditions. METHODS An agricultural soil was incubated with differing levels of biochar. Incubations were conducted under anaerobic conditions for 10 days with and without acetylene, which inhibits N2 O reduction to N2 . The N2 O concentrations were measured every 2 days, the SPs were determined after 5 days of incubation, and the inorganic nitrogen concentrations were measured after the incubation. RESULTS The SP values with acetylene were consistent with N2 O production by bacterial denitrification and those without acetylene were consistent with bacterial denitrification that included N2 O reduction to N2 . There was no effect of biochar on N2 O production in the presence of acetylene between day 3 and day 10. However, in the absence of acetylene, soils incubated with 4% biochar produced less N2 O than soils with no biochar addition. Different amounts of biochar amendment did not change the SP values. CONCLUSIONS Our study used N2 O emission rates and SP values to understand biochar amendment mechanisms and demonstrated that biochar amendment reduces N2 O emissions by stimulating the last step of denitrification. It also suggested a possible shift in N2 O-reducing microbial taxa in 4% biochar samples.
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Affiliation(s)
- Ayumi Hyodo
- Department of Ecosystem Science and Management, Texas A&M University, College Station, TX, 77843, USA
| | - Saadatullah Malghani
- Department of Ecosystem Science and Management, Texas A&M University, College Station, TX, 77843, USA
- School of Civil and Environmental Engineering, Yonsei University, Yonsei-ro 50 Saedaemun-gu, Seoul, 03722, South Korea
| | - Yong Zhou
- Department of Ecosystem Science and Management, Texas A&M University, College Station, TX, 77843, USA
- Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, 06511, USA
| | - Ryan M Mushinski
- Department of Ecosystem Science and Management, Texas A&M University, College Station, TX, 77843, USA
- School of Public and Environmental Affairs, Indiana University, Bloomington, IN, 47405, USA
| | - Sakae Toyoda
- Department of Chemical Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama, 226-8503, Japan
| | - Naohiro Yoshida
- Department of Chemical Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama, 226-8503, Japan
- Earth-Life Science Institute, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo, 152-8550, Japan
| | - Thomas W Boutton
- Department of Ecosystem Science and Management, Texas A&M University, College Station, TX, 77843, USA
| | - Jason B West
- Department of Ecosystem Science and Management, Texas A&M University, College Station, TX, 77843, USA
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7
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Zhou S, Liu N, Zhang L, He T, Li J. Quantum cascade laser based absorption spectroscopy for direct monitoring of atmospheric N 2O isotopes. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2018; 205:79-84. [PMID: 30015032 DOI: 10.1016/j.saa.2018.07.028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2018] [Revised: 06/17/2018] [Accepted: 07/09/2018] [Indexed: 06/08/2023]
Abstract
A compact high-resolution spectroscopic sensor using a thermoelectrically (TE) cooled continuous-wave (CW) room temperature (RT) quantum cascade laser (QCL) operating at 4.6 μm, is employed for simultaneous detection of three main isotopic species (14N15N16O, 15N14N16O and 14N14N16O). To enable a high-precision analysis of N2O isotopic species at ambient mixing ratios, a liquid nitrogen-free preconcentration unit is built to trap and load atmospheric N2O. The absorption spectra of 14N15N16O, 15N14N16O, and 14N14N16O between 2188.6 cm-1 and 2189 cm-1 are measured, and the respective ratios of the rare to the abundant isotopologues abundances are demonstrated. Moreover, spectroscopic parameters of pressure-broadening coefficient for selected absorption lines have been determined, and a good agreement is obtained by comparing with HITRAN database.
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Affiliation(s)
- Sheng Zhou
- Laser Spectroscopy and Sensing Laboratory, Anhui University, 230601 Hefei, China; Key Laboratory of Opto-Electronic Information Acquisition and Manipulation of Ministry of Education, Anhui University, 230601 Hefei, China.
| | - Ningwu Liu
- Laser Spectroscopy and Sensing Laboratory, Anhui University, 230601 Hefei, China; Key Laboratory of Opto-Electronic Information Acquisition and Manipulation of Ministry of Education, Anhui University, 230601 Hefei, China
| | - Lei Zhang
- Laser Spectroscopy and Sensing Laboratory, Anhui University, 230601 Hefei, China; Key Laboratory of Opto-Electronic Information Acquisition and Manipulation of Ministry of Education, Anhui University, 230601 Hefei, China
| | - Tianbo He
- Laser Spectroscopy and Sensing Laboratory, Anhui University, 230601 Hefei, China; Key Laboratory of Opto-Electronic Information Acquisition and Manipulation of Ministry of Education, Anhui University, 230601 Hefei, China
| | - Jingsong Li
- Laser Spectroscopy and Sensing Laboratory, Anhui University, 230601 Hefei, China; Key Laboratory of Opto-Electronic Information Acquisition and Manipulation of Ministry of Education, Anhui University, 230601 Hefei, China.
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8
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Ostrom NE, Gandhi H, Coplen TB, Toyoda S, Böhlke JK, Brand WA, Casciotti KL, Dyckmans J, Giesemann A, Mohn J, Well R, Yu L, Yoshida N. Preliminary assessment of stable nitrogen and oxygen isotopic composition of USGS51 and USGS52 nitrous oxide reference gases and perspectives on calibration needs. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2018; 32:1207-1214. [PMID: 29729051 DOI: 10.1002/rcm.8157] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2018] [Revised: 04/17/2018] [Accepted: 04/19/2018] [Indexed: 06/08/2023]
Abstract
RATIONALE Despite a long history and growing interest in isotopic analyses of N2 O, there is a lack of isotopically characterized N2 O isotopic reference materials (standards) to enable normalization and reporting of isotope-delta values. Here we report the isotopic characterization of two pure N2 O gas reference materials, USGS51 and USGS52, which are now available for laboratory calibration (https://isotopes.usgs.gov/lab/referencematerials.html). METHODS A total of 400 sealed borosilicate glass tubes of each N2 O reference gas were prepared from a single gas filling of a high vacuum line. We demonstrated isotopic homogeneity via dual-inlet isotope-ratio mass spectrometry. Isotopic analyses of these reference materials were obtained from eight laboratories to evaluate interlaboratory variation and provide preliminary isotopic characterization of their δ15 N, δ18 O, δ15 Nα , δ15 Nβ and site preference (SP ) values. RESULTS The isotopic homogeneity of both USGS51 and USGS52 was demonstrated by one-sigma standard deviations associated with the determinations of their δ15 N, δ18 O, δ15 Nα , δ15 Nβ and SP values of 0.12 mUr or better. The one-sigma standard deviations of SP measurements of USGS51 and USGS52 reported by eight laboratories participating in the interlaboratory comparison were 1.27 and 1.78 mUr, respectively. CONCLUSIONS The agreement of isotope-delta values obtained in the interlaboratory comparison was not sufficient to provide reliable accurate isotope measurement values for USGS51 and USGS52. We propose that provisional values for the isotopic composition of USGS51 and USGS52 determined at the Tokyo Institute of Technology can be adopted for normalizing and reporting sample data until further refinements are achieved through additional calibration efforts.
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Affiliation(s)
- Nathaniel E Ostrom
- Department of Integrative Biology and DOE Great Lakes Bioenergy Research Institute, Michigan State University, East Lansing, MI, USA
| | - Hasand Gandhi
- Department of Integrative Biology and DOE Great Lakes Bioenergy Research Institute, Michigan State University, East Lansing, MI, USA
| | - Tyler B Coplen
- U.S. Geological Survey, 431 National Center, Reston, VA, USA
| | - Sakae Toyoda
- Department of Chemical Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, Yokohama, 226-8502, Japan
| | - J K Böhlke
- U.S. Geological Survey, 431 National Center, Reston, VA, USA
| | - Willi A Brand
- Beutenberg Campus, Max-Planck-Institute for Biogeochemistry, P.O. Box 100164, 07701, Jena, Germany
| | - Karen L Casciotti
- Department of Earth System Science, Stanford University, Stanford, CA, USA
| | - Jens Dyckmans
- Büsgen Institute, Georg-August, Centre for Stable Isotope Research and Analysis, Germany
| | - Anette Giesemann
- University Göttingen, Göttingen, Germany
- Thünen Institut of Climate-Smart Agriculture, Braunschweig, Germany
| | - Joachim Mohn
- Laboratory for Air Pollution & Environmental Technology, Empa, Überlandstr. 129, CH-8600, Dübendorf, Switzerland
| | - Reinhard Well
- University Göttingen, Göttingen, Germany
- Thünen Institut of Climate-Smart Agriculture, Braunschweig, Germany
| | - Longfei Yu
- Laboratory for Air Pollution & Environmental Technology, Empa, Überlandstr. 129, CH-8600, Dübendorf, Switzerland
| | - Naohiro Yoshida
- Department of Chemical Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, Yokohama, 226-8502, Japan
- Earth-Life Science Institute, Tokyo Institute of Technology, Tokyo, 152-8550, Japan
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9
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Toyoda S, Yoshida N, Koba K. Isotopocule analysis of biologically produced nitrous oxide in various environments. MASS SPECTROMETRY REVIEWS 2017; 36:135-160. [PMID: 25869149 DOI: 10.1002/mas.21459] [Citation(s) in RCA: 60] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2014] [Revised: 01/13/2015] [Accepted: 01/13/2015] [Indexed: 06/04/2023]
Abstract
Natural abundance ratios of isotopocules, molecules that have the same chemical constitution and configuration, but that only differ in isotope substitution, retain a record of a compound's origin and reactions. A method to measure isotopocule ratios of nitrous oxide (N2 O) has been established by using mass analysis of molecular ions and fragment ions. The method has been applied widely to environmental samples from the atmosphere, ocean, fresh water, soils, and laboratory-simulation experiments. Results show that isotopocule ratios, particularly the 15 N-site preference (difference between isotopocule ratios 14 N15 N16 O/14 N14 N16 O and 15 N14 N16 O/14 N14 N16 O), have a wide range that depends on their production and consumption processes. Observational and laboratory studies of N2 O related to biological processes are reviewed and discussed to elucidate complex material cycles of this trace gas, which causes global warming and stratospheric ozone depletion. © 2015 Wiley Periodicals, Inc. Mass Spec Rev 36:135-160, 2017.
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Affiliation(s)
- Sakae Toyoda
- Department of Environmental Science and Technology, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama 226-8502, Japan
| | - Naohiro Yoshida
- Department of Environmental Science and Technology, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama 226-8502, Japan
- Department of Environmental Chemistry and Engineering, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama 226-8502, Japan
- Earth-Life Science Institute, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8550, Japan
| | - Keisuke Koba
- Institute of Agriculture, Tokyo University of Agriculture and Technology, 3-5-8 Saiwai-cho, Fuchu-City, Tokyo 183-8509, Japan
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10
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Mohn J, Gutjahr W, Toyoda S, Harris E, Ibraim E, Geilmann H, Schleppi P, Kuhn T, Lehmann MF, Decock C, Werner RA, Yoshida N, Brand WA. Reassessment of the NH 4 NO 3 thermal decomposition technique for calibration of the N 2 O isotopic composition. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2016; 30:2487-2496. [PMID: 27605461 DOI: 10.1002/rcm.7736] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2016] [Revised: 08/22/2016] [Accepted: 09/05/2016] [Indexed: 05/21/2023]
Abstract
RATIONALE In the last few years, the study of N2 O site-specific nitrogen isotope composition has been established as a powerful technique to disentangle N2 O emission pathways. This trend has been accelerated by significant analytical progress in the field of isotope ratio mass spectrometry (IRMS) and more recently quantum cascade laser absorption spectroscopy (QCLAS). METHODS The ammonium nitrate (NH4 NO3 ) decomposition technique provides a strategy to scale the 15 N site-specific (SP ≡ δ15 Nα - δ15 Nβ ) and bulk (δ15 Nbulk = (δ15 Nα + δ15 Nβ )/2) isotopic composition of N2 O against the international standard for the 15 N/14 N isotope ratio (AIR-N2 ). Within the current project 15 N fractionation effects during thermal decomposition of NH4 NO3 on the N2 O site preference were studied using static and dynamic decomposition techniques. RESULTS The validity of the NH4 NO3 decomposition technique to link NH4+ and NO3- moiety-specific δ15 N analysis by IRMS to the site-specific nitrogen isotopic composition of N2 O was confirmed. However, the accuracy of this approach for the calibration of δ15 Nα and δ15 Nβ values was found to be limited by non-quantitative NH4 NO3 decomposition in combination with substantially different isotope enrichment factors for the conversion of the NO3- or NH4+ nitrogen atom into the α or β position of the N2 O molecule. CONCLUSIONS The study reveals that the completeness and reproducibility of the NH4 NO3 decomposition reaction currently confine the anchoring of N2 O site-specific isotopic composition to the international isotope ratio scale AIR-N2 . The authors suggest establishing a set of N2 O isotope reference materials with appropriate site-specific isotopic composition, as community standards, to improve inter-laboratory compatibility. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Joachim Mohn
- Laboratory for Air Pollution & Environmental Technology, Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstr. 129,, CH-8600, Dübendorf, Switzerland
| | - Wilhelm Gutjahr
- Laboratory for Air Pollution & Environmental Technology, Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstr. 129,, CH-8600, Dübendorf, Switzerland
| | - Sakae Toyoda
- Department of Chemical Science and Engineering, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama, 226-8502, Japan
| | - Eliza Harris
- Laboratory for Air Pollution & Environmental Technology, Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstr. 129,, CH-8600, Dübendorf, Switzerland
| | - Erkan Ibraim
- Laboratory for Air Pollution & Environmental Technology, Empa, Swiss Federal Laboratories for Materials Science and Technology, Überlandstr. 129,, CH-8600, Dübendorf, Switzerland
| | - Heike Geilmann
- Stable Isotope Laboratory (IsoLab), Max-Planck-Institute for Biogeochemistry (MPI-BGC), Hans-Knöll-Str. 10,, D-07745, Jena, Germany
| | - Patrick Schleppi
- Forest Soils and Biogeochemistry, WSL, Zürcherstrasse 111,, CH-8903, Birmensdorf, Switzerland
| | - Thomas Kuhn
- Biogeochemistry, University of Basel, Bernoullistrasse 30,, CH-4056, Basel, Switzerland
| | - Moritz F Lehmann
- Biogeochemistry, University of Basel, Bernoullistrasse 30,, CH-4056, Basel, Switzerland
| | - Charlotte Decock
- Sustainable Agroecosystems, ETH Zürich, Tannenstrasse 1,, CH-8092, Zürich, Switzerland
| | - Roland A Werner
- Institute of Agricultural Sciences, ETH Zürich, Universitätstrasse 2, CH-8092, Zürich, Switzerland
| | - Naohiro Yoshida
- Department of Chemical Science and Engineering, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama, 226-8502, Japan
- Earth-Life Science Institute, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo, 152-8550, Japan
| | - Willi A Brand
- Stable Isotope Laboratory (IsoLab), Max-Planck-Institute for Biogeochemistry (MPI-BGC), Hans-Knöll-Str. 10,, D-07745, Jena, Germany
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11
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Magyar PM, Orphan VJ, Eiler JM. Measurement of rare isotopologues of nitrous oxide by high-resolution multi-collector mass spectrometry. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2016; 30:1923-1940. [PMID: 27501428 DOI: 10.1002/rcm.7671] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2016] [Revised: 06/16/2016] [Accepted: 06/18/2016] [Indexed: 06/06/2023]
Abstract
RATIONALE Bulk and position-specific stable isotope characterization of nitrous oxide represents one of the most powerful tools for identifying its environmental sources and sinks. Constraining (14) N(15) N(18) O and (15) N(14) N(18) O will add two new dimensions to our ability to uniquely fingerprint N2 O sources. METHODS We describe a technique to measure six singly and doubly substituted isotopic variants of N2 O, constraining the values of δ(15) N, δ(18) O, ∆(17) O, (15) N site preference, and the clumped isotopomers (14) N(15) N(18) O and (15) N(14) N(18) O. The technique uses a Thermo MAT 253 Ultra, a high-resolution multi-collector gas source isotope ratio mass spectrometer. It requires 8-10 hours per sample and ~10 micromoles or more of pure N2 O. RESULTS We demonstrate the precision and accuracy of these measurements by analyzing N2 O brought to equilibrium in its position-specific and clumped isotopic composition by heating in the presence of a catalyst. Finally, an illustrative analysis of biogenic N2 O from a denitrifying bacterium suggests that its clumped isotopic composition is controlled by kinetic isotope effects in N2 O production. CONCLUSIONS We developed a method for measuring six isotopic variants of N2 O and tested it with analyses of biogenic N2 O. The added isotopic constraints provided by these measurements will enhance our ability to apportion N2 O sources.
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Affiliation(s)
- Paul M Magyar
- Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA, 91125, USA
| | - Victoria J Orphan
- Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA, 91125, USA
| | - John M Eiler
- Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA, 91125, USA
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12
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Yada S, Nakajima Y, Itahashi S, Asada K, Yoshikawa S, Eguchi S. Procedure for rapid determination of δ15N and δ18O values of nitrate: development and application to an irrigated rice paddy watershed. WATER SCIENCE AND TECHNOLOGY : A JOURNAL OF THE INTERNATIONAL ASSOCIATION ON WATER POLLUTION RESEARCH 2016; 73:2108-2118. [PMID: 27148712 DOI: 10.2166/wst.2016.053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
The dual isotope approach using the stable isotope ratios of nitrate nitrogen (δ(15)N(NO3)) and oxygen (δ(18)O(NO3)) is a strong tool for identifying the history of nitrate in various environments. Basically, a rapid procedure for determining δ(15)N(NO3) and δ(18)O(NO3) values is required to analyze many more samples quickly and thus save on the operational costs of isotope-ratio mass spectrometry (IRMS). We developed a new rapid procedure to save time by pre-treating consecutive samples of nitrous oxide microbially converted from nitrate before IRMS determination. By controlling two six-port valves of the pre-treatment system separately, IRMS determination of the current sample and backflush during the next sample pre-treatment period could be conducted simultaneously. A set of 89 samples was analyzed precisely during a 25-h continuous run (17 min per sample), giving the fastest reported processing time, and simultaneously reducing liquid nitrogen and carrier helium gas consumption by 35%. Application of the procedure to an irrigated rice paddy watershed suggested that nitrate concentrations in river waters decreased in a downstream direction, mainly because of the mixing of nitrate from different sources, without distinct evidence of denitrification. Our procedure should help with more detailed studies of nitrate formation processes in watersheds.
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Affiliation(s)
- Saeko Yada
- National Institute for Agro-Environmental Sciences, 3-1-3 Kannondai, Tsukuba, Japan E-mail:
| | - Yasuhiro Nakajima
- National Institute for Agro-Environmental Sciences, 3-1-3 Kannondai, Tsukuba, Japan E-mail:
| | - Sunao Itahashi
- National Institute for Agro-Environmental Sciences, 3-1-3 Kannondai, Tsukuba, Japan E-mail:
| | - Kei Asada
- National Institute for Agro-Environmental Sciences, 3-1-3 Kannondai, Tsukuba, Japan E-mail:
| | - Seiko Yoshikawa
- National Institute for Agro-Environmental Sciences, 3-1-3 Kannondai, Tsukuba, Japan E-mail:
| | - Sadao Eguchi
- National Institute for Agro-Environmental Sciences, 3-1-3 Kannondai, Tsukuba, Japan E-mail:
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13
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Lewicka-Szczebak D, Well R, Bol R, Gregory AS, Matthews GP, Misselbrook T, Whalley WR, Cardenas LM. Isotope fractionation factors controlling isotopocule signatures of soil-emitted N₂O produced by denitrification processes of various rates. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2015; 29:269-282. [PMID: 26411625 DOI: 10.1002/rcm.7102] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2014] [Revised: 11/14/2014] [Accepted: 11/17/2014] [Indexed: 06/05/2023]
Abstract
RATIONALE This study aimed (i) to determine the isotopic fractionation factors associated with N2O production and reduction during soil denitrification and (ii) to help specify the factors controlling the magnitude of the isotope effects. For the first time the isotope effects of denitrification were determined in an experiment under oxic atmosphere and using a novel approach where N2O production and reduction occurred simultaneously. METHODS Soil incubations were performed under a He/O2 atmosphere and the denitrification product ratio [N2O/(N2 + N2O)] was determined by direct measurement of N2 and N2O fluxes. N2O isotopocules were analyzed by mass spectrometry to determine δ(18)O, δ(15)N and (15)N site preference within the linear N2O molecule (SP). An isotopic model was applied for the simultaneous determination of net isotope effects (η) of both N2O production and reduction, taking into account emissions from two distinct soil pools. RESULTS A clear relationship was observed between (15)N and (18)O isotope effects during N2O production and denitrification rates. For N2O reduction, diverse isotope effects were observed for the two distinct soil pools characterized by different product ratios. For moderate product ratios (from 0.1 to 1.0) the range of isotope effects given by previous studies was confirmed and refined, whereas for very low product ratios (below 0.1) the net isotope effects were much smaller. CONCLUSIONS The fractionation factors associated with denitrification, determined under oxic incubation, are similar to the factors previously determined under anoxic conditions, hence potentially applicable for field studies. However, it was shown that the η(18)O/η(15)N ratios, previously accepted as typical for N2O reduction processes (i.e., higher than 2), are not valid for all conditions.
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Affiliation(s)
- Dominika Lewicka-Szczebak
- Thünen Institute of Climate-Smart Agriculture, Federal Research Institute for Rural Areas, Forestry and Fisheries, Bundesallee 50, D-38116, Braunschweig, Germany
- Institute of Geological Sciences, University of Wrocław, Cybulskiego 30, PL-50-205, Wroclaw, Poland
| | - Reinhard Well
- Thünen Institute of Climate-Smart Agriculture, Federal Research Institute for Rural Areas, Forestry and Fisheries, Bundesallee 50, D-38116, Braunschweig, Germany
| | - Roland Bol
- Forschungszentrum Jülich IBG-3, Wilhelm-Johnen-Straße, 52428, Jülich, Germany
| | | | - G Peter Matthews
- Faculty of Science & Environment, University of Plymouth, Plymouth, PL4 8AA, UK
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14
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Mohn J, Wolf B, Toyoda S, Lin CT, Liang MC, Brüggemann N, Wissel H, Steiker AE, Dyckmans J, Szwec L, Ostrom NE, Casciotti KL, Forbes M, Giesemann A, Well R, Doucett RR, Yarnes CT, Ridley AR, Kaiser J, Yoshida N. Interlaboratory assessment of nitrous oxide isotopomer analysis by isotope ratio mass spectrometry and laser spectroscopy: current status and perspectives. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2014; 28:1995-2007. [PMID: 25132300 DOI: 10.1002/rcm.6982] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2014] [Revised: 07/09/2014] [Accepted: 07/11/2014] [Indexed: 06/03/2023]
Abstract
RATIONALE In recent years, research and applications of the N2O site-specific nitrogen isotope composition have advanced, reflecting awareness of the contribution of N2O to the anthropogenic greenhouse effect, and leading to significant progress in instrument development. Further dissemination of N2O isotopomer analysis, however, is hampered by a lack of internationally agreed gaseous N2O reference materials and an uncertain compatibility of different laboratories and analytical techniques. METHODS In a first comparison approach, eleven laboratories were each provided with N2O at tropospheric mole fractions (target gas T) and two reference gases (REF1 and REF2). The laboratories analysed all gases, applying their specific analytical routines. Compatibility of laboratories was assessed based on N2O isotopocule data for T, REF1 and REF2. Results for T were then standardised using REF1 and REF2 to evaluate the potential of N2O reference materials for improving compatibility between laboratories. RESULTS Compatibility between laboratories depended on the analytical technique: isotope ratio mass spectrometry (IRMS) results showed better compatibility for δ(15)N values, while the performance of laser spectroscopy was superior with respect to N2O site preference. This comparison, however, is restricted by the small number of participating laboratories applying laser spectroscopy. Offset and two-point calibration correction of the N2O isotopomer data significantly improved the consistency of position-dependent nitrogen isotope data while the effect on δ(15)N values was only minor. CONCLUSIONS The study reveals that for future research on N2O isotopocules, standardisation against N2O reference material is essential to improve interlaboratory compatibility. For atmospheric monitoring activities, we suggest N2O in whole air as a unifying scale anchor.
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Affiliation(s)
- Joachim Mohn
- Laboratory for Air Pollution & Environmental Technology, Empa, Überlandstr. 129, CH-8600, Dübendorf, Switzerland
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15
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Harris E, Nelson DD, Olszewski W, Zahniser M, Potter KE, McManus BJ, Whitehill A, Prinn RG, Ono S. Development of a Spectroscopic Technique for Continuous Online Monitoring of Oxygen and Site-Specific Nitrogen Isotopic Composition of Atmospheric Nitrous Oxide. Anal Chem 2014; 86:1726-34. [DOI: 10.1021/ac403606u] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Eliza Harris
- Department
of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts, 02139 United States
- Laboratory
for Air Pollution and Environmental Technology, Swiss Federal Institute for Materials Science and Technology (EMPA), Überlandstrasse 129, 8600 Dübendorf, Switzerland
| | - David D. Nelson
- Atmospheric
and Environmental Chemistry, Aerodyne Research Inc., 45 Manning Road, Billerica, Massachusetts, 01821 United States
| | - William Olszewski
- Department
of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts, 02139 United States
| | - Mark Zahniser
- Atmospheric
and Environmental Chemistry, Aerodyne Research Inc., 45 Manning Road, Billerica, Massachusetts, 01821 United States
| | - Katherine E. Potter
- Department
of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts, 02139 United States
| | - Barry J. McManus
- Atmospheric
and Environmental Chemistry, Aerodyne Research Inc., 45 Manning Road, Billerica, Massachusetts, 01821 United States
| | - Andrew Whitehill
- Department
of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts, 02139 United States
| | - Ronald G. Prinn
- Department
of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts, 02139 United States
| | - Shuhei Ono
- Department
of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts, 02139 United States
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16
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Potter KE, Ono S, Prinn RG. Fully automated, high-precision instrumentation for the isotopic analysis of tropospheric N2O using continuous flow isotope ratio mass spectrometry. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2013; 27:1723-1738. [PMID: 23821566 DOI: 10.1002/rcm.6623] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2013] [Revised: 05/06/2013] [Accepted: 05/07/2013] [Indexed: 06/02/2023]
Abstract
RATIONALE Measurements of the isotopic composition of nitrous oxide in the troposphere have the potential to bring new information about the uncertain N2O budget, which mole fraction data alone have not been able to resolve. Characterizing the expected subtle variations in tropospheric N2O isotopic composition demands high-precision and high-frequency measurements. To enable useful observations of N2O isotopic composition in tropospheric air to reduce N2O source and sink uncertainty, it was necessary to develop a high-precision measurement system with fully automated capabilities for autonomous deployment at remote research stations. METHODS A fully automated pre-concentration system for high-precision measurements of N2O isotopic composition (δ(15)N(β) , δ(15)N(α), δ(18)O) in tropospheric air has been developed which combines a custom liquid-cryogen-free cryo-trapping system and gas chromatograph interfaced to a continuous flow isotope ratio mass spectrometry (IRMS) system. A quadrupole mass spectrometer was coupled in parallel to the IRMS system during development to evaluate peak interference. Multi-port inlet and fully-automated capabilities allow streamlined analyses between in situ air inlet, air standards, flask air sample, or other gas source in exactly replicated analysis sequences. RESULTS The system has the highest precision to date for (15)N site-specific composition results (δ(15) N(α) ±0.11‰, δ(15)N(β) ±0.14‰ (1σ)), attributed mostly to uniformity of analytical cycles and particular attention to fluorocarbon interference noted for (15)N site-specific measurements by IRMS. Air measurements demonstrated the fully automated capacity and performance. CONCLUSIONS The system makes substantial headway in measurement precision, possibly defining the limits of IRMS measurement capabilities in low concentration N2O air samples, with fully automated capabilities to enable high-frequency in situ measurements.
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Affiliation(s)
- Katherine E Potter
- Department of Earth, Atmospheric, and Planetary Sciences, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA.
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17
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Schreiber F, Wunderlin P, Udert KM, Wells GF. Nitric oxide and nitrous oxide turnover in natural and engineered microbial communities: biological pathways, chemical reactions, and novel technologies. Front Microbiol 2012; 3:372. [PMID: 23109930 PMCID: PMC3478589 DOI: 10.3389/fmicb.2012.00372] [Citation(s) in RCA: 144] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2012] [Accepted: 09/28/2012] [Indexed: 12/20/2022] Open
Abstract
Nitrous oxide (N(2)O) is an environmentally important atmospheric trace gas because it is an effective greenhouse gas and it leads to ozone depletion through photo-chemical nitric oxide (NO) production in the stratosphere. Mitigating its steady increase in atmospheric concentration requires an understanding of the mechanisms that lead to its formation in natural and engineered microbial communities. N(2)O is formed biologically from the oxidation of hydroxylamine (NH(2)OH) or the reduction of nitrite (NO(-) (2)) to NO and further to N(2)O. Our review of the biological pathways for N(2)O production shows that apparently all organisms and pathways known to be involved in the catabolic branch of microbial N-cycle have the potential to catalyze the reduction of NO(-) (2) to NO and the further reduction of NO to N(2)O, while N(2)O formation from NH(2)OH is only performed by ammonia oxidizing bacteria (AOB). In addition to biological pathways, we review important chemical reactions that can lead to NO and N(2)O formation due to the reactivity of NO(-) (2), NH(2)OH, and nitroxyl (HNO). Moreover, biological N(2)O formation is highly dynamic in response to N-imbalance imposed on a system. Thus, understanding NO formation and capturing the dynamics of NO and N(2)O build-up are key to understand mechanisms of N(2)O release. Here, we discuss novel technologies that allow experiments on NO and N(2)O formation at high temporal resolution, namely NO and N(2)O microelectrodes and the dynamic analysis of the isotopic signature of N(2)O with quantum cascade laser absorption spectroscopy (QCLAS). In addition, we introduce other techniques that use the isotopic composition of N(2)O to distinguish production pathways and findings that were made with emerging molecular techniques in complex environments. Finally, we discuss how a combination of the presented tools might help to address important open questions on pathways and controls of nitrogen flow through complex microbial communities that eventually lead to N(2)O build-up.
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Affiliation(s)
- Frank Schreiber
- Department of Environmental Microbiology, Eawag - Swiss Federal Institute of Aquatic Science and Technology Dübendorf, Switzerland ; Department of Environmental Systems Sciences, Eidgenössische Technische Hochschule Zurich, Switzerland
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The Isotopomers of Nitrous Oxide: Analytical Considerations and Application to Resolution of Microbial Production Pathways. ADVANCES IN ISOTOPE GEOCHEMISTRY 2012. [DOI: 10.1007/978-3-642-10637-8_23] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
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Croteau P, Atlas EL, Schauffler SM, Blake DR, Diskin GS, Boering KA. Effect of local and regional sources on the isotopic composition of nitrous oxide in the tropical free troposphere and tropopause layer. ACTA ACUST UNITED AC 2010. [DOI: 10.1029/2009jd013117] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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20
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Well R, Flessa H. Isotopologue enrichment factors of N(2)O reduction in soils. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2009; 23:2996-3002. [PMID: 19681096 DOI: 10.1002/rcm.4216] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Isotopic signatures can be used to study sink and source processes of N(2)O, but the success of this approach is limited by insufficient knowledge on the isotope fractionation factors of the various reaction pathways. We investigated isotope enrichment factors of the N(2)O-to-N(2) step of denitrification (epsilon) in two arable soils, a silt-loam Haplic Luvisol and a sandy Gleyic Podzol. In addition to the epsilon of (18)O (epsilon(18O)) and of average (15)N (epsilon(bulk)), the epsilon of the (15)N site preference within the linear N(2)O molecule (epsilon(SP)) was also determined. Soils were anaerobically incubated in gas-tight bottles with N(2)O added to the headspace to induce N(2)O reduction. Pre-treatment included the removal of NO(3) (-) to prevent N(2)O production. Gas samples were collected regularly to determine the dynamics of N(2)O reduction, the time course of the isotopic signatures of residual N(2)O, and the associated isotope enrichment factors. To vary reduction rates and associated fractionation factors, several treatments were established including two levels of initial N(2)O concentration and anaerobic pre-incubation with or without addition of N(2)O. N(2)O reduction rates were affected by the soil type and initial N(2)O concentration. The epsilon(18O) and epsilon(bulk) ranged between -13 and -20 per thousand, and between -5 and -9 per thousand, respectively. Both quantities were more negative in the Gleyic Podzol. The epsilon of the central N position (epsilon(alpha)) was always larger than that of the peripheral N-position (epsilon(beta)), giving epsilon(SP) of -4 to -8 per thousand. The ranges and variation patterns of epsilon were comparable with those from previous static incubation studies with soils. Moreover, we found a relatively constant ratio between epsilon(18O) and epsilon(bulk) which is close to the default ratio of 2.5 that had been previously suggested. The fact that different soils exhibited comparable epsilon under certain conditions suggests that these values could serve to identify N(2)O reduction from the isotopic fingerprints of N(2)O emitted from any soil.
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Affiliation(s)
- R Well
- Johann Heinrich von Thünen-Institut, Federal Research Institute for Rural Areas, Forestry and Fisheries, Institute of Agricultural Climate Research, Bundesallee 50, 38116 Braunschweig, Germany.
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21
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Well R, Flessa H. Isotopologue signatures of N2O produced by denitrification in soils. ACTA ACUST UNITED AC 2009. [DOI: 10.1029/2008jg000804] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- R. Well
- Büsgen Institute; Universität Göttingen; Göttingen Germany
| | - H. Flessa
- Institute of Agricultural Climate Research; Johann Heinrich von Thünen-Institut; Braunschweig Germany
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22
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Griffith DWT, Parkes SD, Haverd V, Paton-Walsh C, Wilson SR. Absolute Calibration of the Intramolecular Site Preference of 15N Fractionation in Tropospheric N2O by FT-IR Spectroscopy. Anal Chem 2009; 81:2227-34. [DOI: 10.1021/ac802371c] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- David W. T. Griffith
- School of Chemistry, University of Wollongong, Wollongong, New South Wales 2522, Australia
| | - Stephen D. Parkes
- School of Chemistry, University of Wollongong, Wollongong, New South Wales 2522, Australia
| | - Vanessa Haverd
- School of Chemistry, University of Wollongong, Wollongong, New South Wales 2522, Australia
| | - Clare Paton-Walsh
- School of Chemistry, University of Wollongong, Wollongong, New South Wales 2522, Australia
| | - Stephen R. Wilson
- School of Chemistry, University of Wollongong, Wollongong, New South Wales 2522, Australia
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Kaiser J, Röckmann T. Correction of mass spectrometric isotope ratio measurements for isobaric isotopologues of O2, CO, CO2, N2O and SO2. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2008; 22:3997-4008. [PMID: 19016255 DOI: 10.1002/rcm.3821] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Gas isotope ratio mass spectrometers usually measure ion current ratios of molecules, not atoms. Often several isotopologues contribute to an ion current at a particular mass-to-charge ratio (m/z). Therefore, corrections have to be applied to derive the desired isotope ratios. These corrections are usually formulated in terms of isotope ratios (R), but this does not reflect the practice of measuring the ion current ratios of the sample relative to those of a reference material. Correspondingly, the relative ion current ratio differences (expressed as delta values) are first converted into isotopologue ratios, then into isotope ratios and finally back into elemental delta values. Here, we present a reformulation of this data reduction procedure entirely in terms of delta values and the 'absolute' isotope ratios of the reference material. This also shows that not the absolute isotope ratios of the reference material themselves, but only product and ratio combinations of them, are required for the data reduction. These combinations can be and, for carbon and oxygen have been, measured by conventional isotope ratio mass spectrometers. The frequently implied use of absolute isotope ratios measured by specially calibrated instruments is actually unnecessary. Following related work on CO2, we here derive data reduction equations for the species O2, CO, N2O and SO2. We also suggest experiments to measure the required absolute ratio combinations for N2O, SO2 and O2. As a prelude, we summarise historic and recent measurements of absolute isotope ratios in international isotope reference materials.
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Affiliation(s)
- Jan Kaiser
- School of Environmental Sciences, University of East Anglia, Norwich, UK.
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Well R, Flessa H. Isotope fractionation factors of N2O diffusion. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2008; 22:2621-2628. [PMID: 18666201 DOI: 10.1002/rcm.3656] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Isotopic signatures of N2O are increasingly used to constrain the total global flux and the relative contribution of nitrification and denitrification to N2O emissions. Interpretation of isotopic signatures of soil-emitted N2O can be complicated by the isotopic effects of gas diffusion. The aim of our study was to measure the isotopic fractionation factors of diffusion for the isotopologues of N2O and to estimate the potential effect of diffusive fractionation during N2O fluxes from soils using simple simulations. Diffusion experiments were conducted to monitor isotopic signatures of N2O in reservoirs that lost N2O by defined diffusive fluxes. Two different mathematical approaches were used to derive diffusive isotope fractionation factors for 18O (epsilon18O), average 15N (epsilonbulk) and 15N of the central (alpha(-)) and peripheral (beta(-)) position within the linear N2O molecule (epsilon15Nalpha, epsilon15Nbeta). The measured epsilon18O was -7.79 +/- 0.27 per thousand and thus higher than the theoretical value of -8.7 per thousand. Conversely, the measured epsilonbulk (-5.23 +/- 0.27 per thousand) was lower than the theoretical value (-4.4 per thousand). The measured site-specific 15N fractionation factors were not equal, giving a difference between epsilon15Nalpha and epsilon15Nbeta (epsilonSP) of 1.55 +/- 0.28 per thousand. Diffusive fluxes of the N2O isotopologues from the soil pore space to the atmosphere were simulated, showing that isotopic signatures of N2O source pools and emitted N2O can be substantially different during periods of non-steady state fluxes. Our results show that diffusive isotope fractionation should be taken into account when interpreting natural abundance isotopic signatures of N2O fluxes from soils.
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Affiliation(s)
- Reinhard Well
- Soil Science of Temperate and Boreal Ecosystems, Buesgeninstitute, University of Göttingen, Büsgenweg 2, 37077 Göttingen, Germany.
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Waechter H, Mohn J, Tuzson B, Emmenegger L, Sigrist MW. Determination of N2O isotopomers with quantum cascade laser based absorption spectroscopy. OPTICS EXPRESS 2008; 16:9239-9244. [PMID: 18545636 DOI: 10.1364/oe.16.009239] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
We present an analytical technique based on direct absorption laser spectroscopy for high precision and simultaneous determination of the mixing ratios of the most abundant nitrous oxide isotopic species: (14)N(15)N(16)O, (15)N(14)N(16)O and (14)N(2) (16)O. A precision of 0.5 ??? was achieved for the site specific isotope ratios of N(2)O at 90 ppm using an averaging time of 300 s.
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Affiliation(s)
- Helen Waechter
- ETH Zurich, Institute for Quantum Electronics, Laboratory for Laser Spectroscopy and Sensing, Schafmattstr. 16, 8093 Zurich, Switzerland
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Komatsu DD, Ishimura T, Nakagawa F, Tsunogai U. Determination of the 15N/14N, 17O/16O, and 18O/16O ratios of nitrous oxide by using continuous-flow isotope-ratio mass spectrometry. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2008; 22:1587-1596. [PMID: 18433083 DOI: 10.1002/rcm.3493] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
We developed a rapid, sensitive, and automated analytical system to determine the delta15N, delta18O, and Delta17O values of nitrous oxide (N2O) simultaneously in nanomolar quantities for a single batch of samples by continuous-flow isotope-ratio mass spectrometry (CF-IRMS) without any cumbersome and time-consuming pretreatments. The analytical system consisted of a vacuum line to extract and purify N2O, a gas chromatograph for further purification of N2O, an optional thermal furnace to decompose N2O to O2, and a CF-IRMS system. We also used pneumatic valves and pneumatic actuators in the system so that we could operate it automatically with timing software on a personal computer. The analytical precision was better than 0.12 per thousand for delta15N with >4 nmol N2O injections, 0.25 per thousand for delta18O with >4 nmol N2O injections, and 0.20 per thousand for Delta17O with >20 nmol N2O injections for a single measurement. We were also easily able to improve the precision (standard errors) to better than 0.05 per thousand for delta15N, 0.10 per thousand for delta18O, and 0.10 per thousand for Delta17O through multiple analyses with more than four repetitions with 190 nmol samples using the automated analytical system. Using the system, the delta15N, delta18O, and Delta17O values of N2O can be quantified not only for atmospheric samples, but also for other gas or liquid samples with low N2O content, such as soil gas or natural water. Here, we showed the first ever Delta17O measurements of soil N2O.
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Affiliation(s)
- Daisuke D Komatsu
- Earth and Planetary System Sciences, Faculty of Science, Hokkaido University, N10 W8, Sapporo 060-0810, Japan.
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Toyoda S, Yamamoto SI, Arai S, Nara H, Yoshida N, Kashiwakura K, Akiyama KI. Isotopomeric characterization of N2O produced, consumed, and emitted by automobiles. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2008; 22:603-612. [PMID: 18247408 DOI: 10.1002/rcm.3400] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Fossil fuel combustion is the second largest anthropogenic source of nitrous oxide (N2O) after agriculture. The estimated global N2O flux from combustion sources, as well as from other sources, still has a large uncertainty. Herein, we characterize automobile sources using N2O isotopomer ratios (nitrogen and oxygen isotope ratios and intramolecular site preference of 15N, SP) to assess their contributions to total global sources and to deconvolute complex production/consumption processes during combustion and subsequent catalytic treatments of exhaust. Car exhaust gases were sampled under running and idling state, and N2O isotopomer ratios were measured by mass spectrometry. The N2O directly emitted from an engine of a vehicle running at constant velocity had almost constant isotopomer ratios (delta15Nbulk = -28.7 +/- 1.2 per thousand, delta18O = 28.6 +/- 3.3 per thousand, and SP = 4.2 +/- 0.8 per thousand) irrespective of the velocity. After passing through catalytic converters, the isotopomer ratios showed an increase which varied with the temperature and the aging of the catalysts. The increase suggests that both production and consumption of N2O occur on the catalyst and that their rates can be comparable. It was noticed that in the idling state, the N2O emitted from a brand new car has higher isotopomer ratios than that from used cars, which indicate that technical improvements in catalytic converters can reduce the N2O from mobile combustion sources. On average, the isotopomeric signatures of N2O finally emitted from automobiles are not sensitive to running/idling states or to aging of the catalysts. Characteristic average isotopomer ratios of N2O from automobile sources are estimated at -4.9 +/- 8.2 per thousand, 43.5 +/- 13.9 per thousand, and 12.2 +/- 9.1 per thousand for delta15Nbulk, delta18O, and SP, respectively.
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Affiliation(s)
- Sakae Toyoda
- Department of Environmental Chemistry and Engineering, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama 226-8502, Japan.
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Ostrom NE, Pitt A, Sutka R, Ostrom PH, Grandy AS, Huizinga KM, Robertson GP. Isotopologue effects during N2O reduction in soils and in pure cultures of denitrifiers. ACTA ACUST UNITED AC 2007. [DOI: 10.1029/2006jg000287] [Citation(s) in RCA: 139] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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