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Verma V, Vishal B, Kohli A, Kumar PP. Systems-based rice improvement approaches for sustainable food and nutritional security. PLANT CELL REPORTS 2021; 40:2021-2036. [PMID: 34591154 DOI: 10.1007/s00299-021-02790-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Accepted: 09/15/2021] [Indexed: 06/13/2023]
Abstract
An integrated research approach to ensure sustainable rice yield increase of a crop grown by 25% of the world's farmers in 10% of cropland is essential for global food security. Rice, being a global staple crop, feeds about 56% of the world population and sustains 40% of the world's poor. At ~ $200 billion, it also accounts for 13% of the annual crop value. With hunger and malnutrition rampant among the poor, rice research for development is unique in global food and nutrition security. A systems-based, sustainable increase in rice quantity and quality is imperative for environmental and biodiversity benefits. Upstream 'discovery' through biotechnology, midstream 'development' through breeding and agronomy, downstream 'dissemination and deployment' must be 'demand-driven' for 'distinct socio-economic transformational impacts'. Local agro-ecology and livelihood nexus must drive the research agenda for targeted benefits. This necessitates sustained long-term investments by government, non-government and private sectors to secure the future food, nutrition, environment, prosperity and equity status.
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Affiliation(s)
- Vivek Verma
- Department of Biotechnology, School of Life Sciences, Central University of Rajasthan, Ajmer, 305817, Rajasthan, India.
| | - Bhushan Vishal
- School of Biological Sciences, Nanyang Technological University, Singapore, 639798, Republic of Singapore
| | - Ajay Kohli
- Strategic Innovation Platform, International Rice Research Institute, DAPO 7777, Metro Manila, Philippines
| | - Prakash P Kumar
- Department of Biological Sciences, Faculty of Science, National University of Singapore, Singapore, 117543, Republic of Singapore.
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Iqbal Z, Iqbal MS, Khan MIR, Ansari MI. Toward Integrated Multi-Omics Intervention: Rice Trait Improvement and Stress Management. FRONTIERS IN PLANT SCIENCE 2021; 12:741419. [PMID: 34721467 PMCID: PMC8554098 DOI: 10.3389/fpls.2021.741419] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Accepted: 09/20/2021] [Indexed: 05/04/2023]
Abstract
Rice (Oryza sativa) is an imperative staple crop for nearly half of the world's population. Challenging environmental conditions encompassing abiotic and biotic stresses negatively impact the quality and yield of rice. To assure food supply for the unprecedented ever-growing world population, the improvement of rice as a crop is of utmost importance. In this era, "omics" techniques have been comprehensively utilized to decipher the regulatory mechanisms and cellular intricacies in rice. Advancements in omics technologies have provided a strong platform for the reliable exploration of genetic resources involved in rice trait development. Omics disciplines like genomics, transcriptomics, proteomics, and metabolomics have significantly contributed toward the achievement of desired improvements in rice under optimal and stressful environments. The present review recapitulates the basic and applied multi-omics technologies in providing new orchestration toward the improvement of rice desirable traits. The article also provides a catalog of current scenario of omics applications in comprehending this imperative crop in relation to yield enhancement and various environmental stresses. Further, the appropriate databases in the field of data science to analyze big data, and retrieve relevant information vis-à-vis rice trait improvement and stress management are described.
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Affiliation(s)
- Zahra Iqbal
- Molecular Crop Research Unit, Department of Biochemistry, Chulalongkorn University, Bangkok, Thailand
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Brotman Y, Llorente-Wiegand C, Oyong G, Badoni S, Misra G, Anacleto R, Parween S, Pasion E, Tiozon RN, Anonuevo JJ, deGuzman MK, Alseekh S, Mbanjo EGN, Boyd LA, Fernie AR, Sreenivasulu N. The genetics underlying metabolic signatures in a brown rice diversity panel and their vital role in human nutrition. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 106:507-525. [PMID: 33529453 DOI: 10.1111/tpj.15182] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2020] [Revised: 01/19/2021] [Accepted: 01/26/2021] [Indexed: 06/12/2023]
Abstract
Brown rice (Oryza sativa) possesses various nutritionally dense bioactive phytochemicals exhibiting a wide range of antioxidant, anti-cancer, and anti-diabetic properties known to promote various human health benefits. However, despite the wide claims made about the importance of brown rice for human nutrition the underlying metabolic diversity has not been systematically explored. Non-targeted metabolite profiling of developing and mature seeds of a diverse genetic panel of 320 rice cultivars allowed quantification of 117 metabolites. The metabolite genome-wide association study (mGWAS) detected genetic variants influencing diverse metabolic targets in developing and mature seeds. We further interlinked genetic variants on chromosome 7 (6.06-6.43 Mb region) with complex epistatic genetic interactions impacting multi-dimensional nutritional targets, including complex carbohydrate starch quality, the glycemic index, antioxidant catechin, and rice grain color. Through this nutrigenomics approach rare gene bank accessions possessing genetic variants in bHLH and IPT5 genes were identified through haplotype enrichment. These variants were associated with a low glycemic index, higher catechin levels, elevated total flavonoid contents, and heightened antioxidant activity in the whole grain with elevated anti-cancer properties being confirmed in cancer cell lines. This multi-disciplinary nutrigenomics approach thus allowed us to discover the genetic basis of human health-conferring diversity in the metabolome of brown rice.
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Affiliation(s)
- Yariv Brotman
- Max-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
- Department of Life Sciences, Ben-Gurion University of the Negev, Beersheba, Israel
| | | | - Glenn Oyong
- Molecular Science Unit Laboratory - Center for Natural Sciences and Environmental Research, De La Salle University, 2401 Taft Avenue, Manila, 1004, Philippines
| | - Saurabh Badoni
- International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
| | - Gopal Misra
- International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
| | - Roslen Anacleto
- International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
| | - Sabiha Parween
- International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
| | - Erstelle Pasion
- International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
| | - Rhowell N Tiozon
- International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
| | - Joanne J Anonuevo
- International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
| | - Maria K deGuzman
- International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
| | - Saleh Alseekh
- Max-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
- Center of Plant Systems Biology and Biotechnology, Plovdiv, 4000, Bulgaria
| | - Edwige G N Mbanjo
- International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
| | - Lesley A Boyd
- NIAB, 93 Lawrence Weaver Road, Cambridge, CB3 0LE, UK
| | - Alisdair R Fernie
- Max-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
- Center of Plant Systems Biology and Biotechnology, Plovdiv, 4000, Bulgaria
| | - Nese Sreenivasulu
- International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
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Yao H, Wang Y, Razi MK. An asymmetric Salamo-based Zn complex supported on Fe 3O 4 MNPs: a novel heterogeneous nanocatalyst for the silyl protection and deprotection of alcohols under mild conditions. RSC Adv 2021; 11:12614-12625. [PMID: 35423821 PMCID: PMC8696965 DOI: 10.1039/d1ra01185e] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Accepted: 03/12/2021] [Indexed: 12/20/2022] Open
Abstract
In this study, a magnetic asymmetric Salamo-based Zn complex (H2L = salen type di-Schiff bases)-supported on the surface of modified Fe3O4 (Fe3O4@H2L-Zn) as a new catalyst was designed and characterized via numerous analytical techniques such as FT-IR spectroscopy, XRD, EDS, ICP-AES, SEM, TEM, TGA and VSM. An efficient and sustainable synthetic protocol has been presented for the synthesis of silyl ether substructures via the silyl protection of alcohols under mild conditions. The synthetic protocol involves a two-component solvent-free reaction between various hydroxyl-bearing substrates and hexamethyldisilazane (HMDS) as an inexpensive silylating agent using Fe3O4@H2L-Zn MNPs as a magnetically separable, recyclable and reusable heterogeneous catalyst. Fe3O4@H2L-Zn MNPs were also applied for the removal of silyl protecting groups from hydroxyl functions using water in CH2Cl2 under green conditions. The catalyst demonstrated good to excellent catalytic yield efficiency for both the reactions compared to the commercial metal-based catalysts under green conditions for a wide range of substrates.
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Affiliation(s)
- Hongyan Yao
- Dean's Office, Hebi Polytechnic Hebi 458030 China
| | - Yongsheng Wang
- School of Physical Science Education, Henan Polytechnic University Jiaozuo 454003 China
| | - Maryam Kargar Razi
- Faculty of Chemistry, North Branch of Tehran, Islamic Azad University Tehran Iran
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