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Alghamdi AM, Al Shehri WA, Almalki J, Jannah N, Alsubaei FS. An architecture for COVID-19 analysis and detection using big data, AI, and data architectures. PLoS One 2024; 19:e0305483. [PMID: 39088543 PMCID: PMC11293665 DOI: 10.1371/journal.pone.0305483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2023] [Accepted: 05/31/2024] [Indexed: 08/03/2024] Open
Abstract
The COVID-19 epidemic is affecting individuals in many ways and continues to spread all over the world. Vaccines and traditional medical techniques are still being researched. In diagnosis and therapy, biological and digital technology is used to overcome the fear of this disease. Despite recovery in many patients, COVID-19 does not have a definite cure or a vaccine that provides permanent protection for a large number of people. Current methods focus on prevention, monitoring, and management of the spread of the disease. As a result, new technologies for combating COVID-19 are being developed. Though unreliable due to a lack of sufficient COVID-19 datasets, inconsistencies in the datasets availability, non-aggregation of the database because of conflicting data formats, incomplete information, and distortion, they are a step in the right direction. Furthermore, the privacy and confidentiality of people's medical data are only partially ensured. As a result, this research study proposes a novel, cooperative approach that combines big data analytics with relevant Artificial Intelligence (AI) techniques and blockchain to create a system for analyzing and detecting COVID-19 instances. Based on these technologies, the reliability, affordability, and prominence of dealing with the above problems required time. The architecture of the proposed model will analyze different data sources for preliminary diagnosis, detect the affected area, and localize the abnormalities. Furthermore, the blockchain approach supports the decentralization of the central repository so that it is accessible to every stakeholder. The model proposed in this study describes the four-layered architecture. The purpose of the proposed architecture is to utilize the latest technologies to provide a reliable solution during the pandemic; the proposed architecture was sufficient to cover all the current issues, including data security. The layers are unique and individually responsible for handling steps required for data acquisition, storage, analysis, and reporting using blockchain principles in a decentralized P2P network. A systematic review of the technologies to use in the pandemic covers all possible solutions that can cover the issue best and provide a secure solution to the pandemic.
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Affiliation(s)
- Ahmed Mohammed Alghamdi
- Department of Software Engineering, College of Computer Science and Engineering, University of Jeddah, Jeddah, Saudi Arabia
| | - Waleed A. Al Shehri
- Department of Computing, College of Engineering and Computing in Al-Lith, Umm Al-Qura University, Makkah, Saudi Arabia
| | - Jameel Almalki
- Department of Computing, College of Engineering and Computing in Al-Lith, Umm Al-Qura University, Makkah, Saudi Arabia
| | - Najlaa Jannah
- Department of Computing, College of Engineering and Computing in Al-Lith, Umm Al-Qura University, Makkah, Saudi Arabia
| | - Faisal S. Alsubaei
- Department of Cybersecurity, College of Computer Science and Engineering, University of Jeddah, Jeddah, Saudi Arabia
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Vijayanandh T, Shenbagavalli A. A Hybrid Deep Neural Approach for Segmenting the COVID Affection Area from the Lungs X-Ray Images. NEW GENERATION COMPUTING 2023; 41:1-20. [PMID: 37362548 PMCID: PMC10184644 DOI: 10.1007/s00354-023-00222-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Accepted: 05/04/2023] [Indexed: 06/28/2023]
Abstract
Nowadays, COVID severity prediction has attracted widely in medical research because of the disease severity. Hence, the image processing application is also utilized to analyze COVID severity identification using lungs X-ray images. Thus, several intelligent schemes were employed to detect the COVID-affected part of the lungs X-ray images. However, the traditional neural approaches reported less severity classification accuracy due to the image complexity score. So, the present study has presented a novel chimp-based Adaboost Severity Analysis (CbASA) implemented in the MATLAB environment. Hence, the lung's X-ray images are utilized to test the working performance of the designed model. All public imaging data sources contain more noisy features, so the noise features are removed in the initial hidden layer of the novel CbASA then the noise-free data is imported into the classification phase. Feature extraction, segmentation, and severity specification have been performed in the classification layer. Finally, the performance of the classification score has been measured and compared with other models. Subsequently, the presented novel CbASA has earned the finest classification outcome.
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Affiliation(s)
- T. Vijayanandh
- Department of Computer Science and Engineering, Vel Tech Rangarajan Dr.Sagunthala R&D Institute of Science and Technology, Chennai, Tamil Nadu 600062 India
| | - A. Shenbagavalli
- Department of Electronics and Communication Engineering, National Engineering College, Kovilpatti, Tamil Nadu 628503 India
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Akbulut Y. Automated Pneumonia Based Lung Diseases Classification with Robust Technique Based on a Customized Deep Learning Approach. Diagnostics (Basel) 2023; 13:diagnostics13020260. [PMID: 36673070 PMCID: PMC9858391 DOI: 10.3390/diagnostics13020260] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Revised: 12/15/2022] [Accepted: 01/09/2023] [Indexed: 01/12/2023] Open
Abstract
Many people have been affected by infectious lung diseases (ILD). With the outbreak of the COVID-19 disease in the last few years, many people have waited for weeks to recover in the intensive care wards of hospitals. Therefore, early diagnosis of ILD is of great importance to reduce the occupancy rates of health institutions and the treatment time of patients. Many artificial intelligence-based studies have been carried out in detecting and classifying diseases from medical images using imaging applications. The most important goal of these studies was to increase classification performance and model reliability. In this approach, a powerful algorithm based on a new customized deep learning model (ACL model), which trained synchronously with the attention and LSTM model with CNN models, was proposed to classify healthy, COVID-19 and Pneumonia. The important stains and traces in the chest X-ray (CX-R) image were emphasized with the marker-controlled watershed (MCW) segmentation algorithm. The ACL model was trained for different training-test ratios (90-10%, 80-20%, and 70-30%). For 90-10%, 80-20%, and 70-30% training-test ratios, accuracy scores were 100%, 96%, and 96%, respectively. The best performance results were obtained compared to the existing methods. In addition, the contribution of the strategies utilized in the proposed model to classification performance was analyzed in detail. Deep learning-based applications can be used as a useful decision support tool for physicians in the early diagnosis of ILD diseases. However, for the reliability of these applications, it is necessary to undertake verification with many datasets.
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Affiliation(s)
- Yaman Akbulut
- Department of Software Engineering, Faculty of Technology, Firat University, Elazig 23200, Turkey
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Dual_Pachi: Attention-based dual path framework with intermediate second order-pooling for Covid-19 detection from chest X-ray images. Comput Biol Med 2022; 151:106324. [PMID: 36423531 PMCID: PMC9671873 DOI: 10.1016/j.compbiomed.2022.106324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2022] [Revised: 10/27/2022] [Accepted: 11/14/2022] [Indexed: 11/19/2022]
Abstract
Numerous machine learning and image processing algorithms, most recently deep learning, allow the recognition and classification of COVID-19 disease in medical images. However, feature extraction, or the semantic gap between low-level visual information collected by imaging modalities and high-level semantics, is the fundamental shortcoming of these techniques. On the other hand, several techniques focused on the first-order feature extraction of the chest X-Ray thus making the employed models less accurate and robust. This study presents Dual_Pachi: Attention Based Dual Path Framework with Intermediate Second Order-Pooling for more accurate and robust Chest X-ray feature extraction for Covid-19 detection. Dual_Pachi consists of 4 main building Blocks; Block one converts the received chest X-Ray image to CIE LAB coordinates (L & AB channels which are separated at the first three layers of a modified Inception V3 Architecture.). Block two further exploit the global features extracted from block one via a global second-order pooling while block three focuses on the low-level visual information and the high-level semantics of Chest X-ray image features using a multi-head self-attention and an MLP Layer without sacrificing performance. Finally, the fourth block is the classification block where classification is done using fully connected layers and SoftMax activation. Dual_Pachi is designed and trained in an end-to-end manner. According to the results, Dual_Pachi outperforms traditional deep learning models and other state-of-the-art approaches described in the literature with an accuracy of 0.96656 (Data_A) and 0.97867 (Data_B) for the Dual_Pachi approach and an accuracy of 0.95987 (Data_A) and 0.968 (Data_B) for the Dual_Pachi without attention block model. A Grad-CAM-based visualization is also built to highlight where the applied attention mechanism is concentrated.
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Jha M, Gupta R, Saxena R. A framework for in-vivo human brain tumor detection using image augmentation and hybrid features. Health Inf Sci Syst 2022; 10:23. [PMID: 36042871 PMCID: PMC9420164 DOI: 10.1007/s13755-022-00193-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2022] [Accepted: 08/14/2022] [Indexed: 10/15/2022] Open
Abstract
Brain tumor is caused by the uncontrolled and accelerated multiplication of cells in the brain. If not treated early enough, it can lead to death. Despite multiple significant efforts and promising research outcomes, accurate segmentation and classification of tumors remain a challenge. The changes in tumor location, shape, and size make brain tumor identification extremely difficult. An Extreme Gradient Boosting (XGBoost) algorithm using is proposed in this work to classify four subtypes of brain tumor-normal, gliomas, meningiomas, and pituitary tumors. Because the dataset was limited in size, image augmentation using a conditional Generative Adversarial Network (cGAN) was used to expand the training data. Deep features, Two-Dimensional Fractional Fourier Transform (2D-FrFT) features, and geometric features are fused together to extract both global and local information from the Magnetic Resonance Imaging (MRI) scans. The model attained enhanced performance with a classification accuracy of 98.79% and sensitivity of 98.77% for the test images. In comparison to state-of-the-art algorithms employing the Kaggle brain tumor dataset, the suggested model showed a considerable improvement. The improved results show the prominence of feature fusion and establish XGBoost as an appropriate classifier for brain tumor detection in terms on testing accuracy, sensitivity and Area under receiver operating characteristic (AUROC) curve.
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Affiliation(s)
- Manika Jha
- Department of Electronics and Communication, Jaypee Institute of Information Technology, Noida, 201309 India
| | - Richa Gupta
- Department of Electronics and Communication, Jaypee Institute of Information Technology, Noida, 201309 India
| | - Rajiv Saxena
- Department of Electronics and Communication, Jaypee Institute of Information Technology, Noida, 201309 India
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Muzoğlu N, Halefoğlu AM, Avci MO, Kaya Karaaslan M, Yarman BSB. Detection of COVID-19 and its pulmonary stage using Bayesian hyperparameter optimization and deep feature selection methods. EXPERT SYSTEMS 2022; 40:e13141. [PMID: 36245832 PMCID: PMC9537791 DOI: 10.1111/exsy.13141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Revised: 07/25/2022] [Accepted: 09/05/2022] [Indexed: 06/16/2023]
Abstract
Since the first case of COVID-19 was reported in December 2019, many studies have been carried out on artificial intelligence for the rapid diagnosis of the disease to support health services. Therefore, in this study, we present a powerful approach to detect COVID-19 and COVID-19 findings from computed tomography images using pre-trained models using two different datasets. COVID-19, influenza A (H1N1) pneumonia, bacterial pneumonia and healthy lung image classes were used in the first dataset. Consolidation, crazy-paving pattern, ground-glass opacity, ground-glass opacity and consolidation, ground-glass opacity and nodule classes were used in the second dataset. The study consists of four steps. In the first two steps, distinctive features were extracted from the final layers of the pre-trained ShuffleNet, GoogLeNet and MobileNetV2 models trained with the datasets. In the next steps, the most relevant features were selected from the models using the Sine-Cosine optimization algorithm. Then, the hyperparameters of the Support Vector Machines were optimized with the Bayesian optimization algorithm and used to reclassify the feature subset that achieved the highest accuracy in the third step. The overall accuracy obtained for the first and second datasets is 99.46% and 99.82%, respectively. Finally, the performance of the results visualized with Occlusion Sensitivity Maps was compared with Gradient-weighted class activation mapping. The approach proposed in this paper outperformed other methods in detecting COVID-19 from multiclass viral pneumonia. Moreover, detecting the stages of COVID-19 in the lungs was an innovative and successful approach.
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Affiliation(s)
- Nedim Muzoğlu
- Department of Biomedical Engineering, Faculty of EngineeringIstanbul University‐CerrahpasaIstanbulTurkey
| | - Ahmet Mesrur Halefoğlu
- Department of RadiologySisli Hamidiye Etfal Training and Research Hospital, Health Sciences UniversityIstanbulTurkey
| | - Muhammed Onur Avci
- Department of Biomedical Engineering, Faculty of EngineeringIstanbul University‐CerrahpasaIstanbulTurkey
| | - Melike Kaya Karaaslan
- Department of Biomedical SciencesFaculty of Engineering, Kocaeli UniversityKocaeliTurkey
| | - Bekir Sıddık Binboğa Yarman
- Department of Electrical‐Electronics Engineering, Faculty of EngineeringIstanbul University‐CerrahpasaIstanbulTurkey
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Hura GS, Groppe S, Jain S, Gruenwald L. Artificial Intelligence in Global Epidemics, Part 2: Editorial. NEW GENERATION COMPUTING 2022; 40:935-939. [PMID: 36467628 PMCID: PMC9684907 DOI: 10.1007/s00354-022-00196-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Affiliation(s)
| | | | - Sarika Jain
- National Institute of Technology, Kurukshetra, India
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