1
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Li W, Rahbar MH, Savitz SI, Zhang J, Lundin SK, Tahanan A, Ning J. Regression analysis of multivariate recurrent event data allowing time-varying dependence with application to stroke registry data. Stat Methods Med Res 2024; 33:309-320. [PMID: 38263734 PMCID: PMC11080814 DOI: 10.1177/09622802231226330] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2024]
Abstract
In multivariate recurrent event data, each patient may repeatedly experience more than one type of event. Analysis of such data gets further complicated by the time-varying dependence structure among different types of recurrent events. The available literature regarding the joint modeling of multivariate recurrent events assumes a constant dependency over time, which is strict and often violated in practice. To close the knowledge gap, we propose a class of flexible shared random effects models for multivariate recurrent event data that allow for time-varying dependence to adequately capture complex correlation structures among different types of recurrent events. We developed an expectation-maximization algorithm for stable and efficient model fitting. Extensive simulation studies demonstrated that the estimators of the proposed approach have satisfactory finite sample performance. We applied the proposed model and the estimating method to data from a cohort of stroke patients identified in the University of Texas Houston Stroke Registry and evaluated the effects of risk factors and the dependence structure of different types of post-stroke readmission events.
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Affiliation(s)
- Wen Li
- Division of Clinical and Translational Sciences, Department of Internal Medicine the University of Texas McGovern Medical School at Houston, Houston, TX 77030, USA
- Biostatistics/Epidemiology/Research Design (BERD) Component, Center for Clinical and Translational Sciences (CCTS), University of Texas Health Science Center at Houston, Houston, TX 77030, USA
| | - Mohammad H. Rahbar
- Division of Clinical and Translational Sciences, Department of Internal Medicine the University of Texas McGovern Medical School at Houston, Houston, TX 77030, USA
- Biostatistics/Epidemiology/Research Design (BERD) Component, Center for Clinical and Translational Sciences (CCTS), University of Texas Health Science Center at Houston, Houston, TX 77030, USA
- Division of Epidemiology, Human Genetics, and Environmental Sciences (EHGES), University of Texas School of Public Health at Houston, Houston, TX 77030, USA
| | - Sean I. Savitz
- Department of Neurology and Institute for Stroke and Cerebrovascular Disease, The University of Texas Health Science Center, Houston, TX 77030, USA
| | - Jing Zhang
- Biostatistics/Epidemiology/Research Design (BERD) Component, Center for Clinical and Translational Sciences (CCTS), University of Texas Health Science Center at Houston, Houston, TX 77030, USA
- Department of Biostatistics & Data Science, School of Public Health, The University of Texas Health Science Center at Houston, Houston, TX 77030, USA
| | - Sori Kim Lundin
- Biostatistics/Epidemiology/Research Design (BERD) Component, Center for Clinical and Translational Sciences (CCTS), University of Texas Health Science Center at Houston, Houston, TX 77030, USA
- Center for Biomedical Semantics and Data Intelligence, Houston, TX 77030, USA
| | - Amirali Tahanan
- Biostatistics/Epidemiology/Research Design (BERD) Component, Center for Clinical and Translational Sciences (CCTS), University of Texas Health Science Center at Houston, Houston, TX 77030, USA
| | - Jing Ning
- Department of Biostatistics, University of Texas MD Anderson Cancer Center at Houston, TX 77030, USA
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2
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Ma C, Wang C, Pan J. Multistate modeling and structure selection for multitype recurrent events and terminal event data. Biom J 2023; 65:e2100334. [PMID: 36124712 DOI: 10.1002/bimj.202100334] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Revised: 06/19/2022] [Accepted: 07/04/2022] [Indexed: 11/07/2022]
Abstract
In cardiovascular disease studies, a large number of risk factors are measured but it often remains unknown whether all of them are relevant variables and whether the impact of these variables is changing with time or remains constant. In addition, more than one kind of cardiovascular disease events can be observed in the same patient and events of different types are possibly correlated. It is expected that different kinds of events are associated with different covariates and the forms of covariate effects also vary between event types. To tackle these problems, we proposed a multistate modeling framework for the joint analysis of multitype recurrent events and terminal event. Model structure selection is performed to identify covariates with time-varying coefficients, time-independent coefficients, and null effects. This helps in understanding the disease process as it can detect relevant covariates and identify the temporal dynamics of the covariate effects. It also provides a more parsimonious model to achieve better risk prediction. The performance of the proposed model and selection method is evaluated in numerical studies and illustrated on a real dataset from the Atherosclerosis Risk in Communities study.
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Affiliation(s)
- Chuoxin Ma
- Guangdong Provincial Key Laboratory of Interdisciplinary Research and Application for Data Science, BNU-HKBU United International College, Zhuhai, China
| | - Chunyu Wang
- Department of Mathematics, University of Manchester, Manchester, UK
| | - Jianxin Pan
- Guangdong Provincial Key Laboratory of Interdisciplinary Research and Application for Data Science, BNU-HKBU United International College, Zhuhai, China.,Research Center for Mathematics, Beijing Normal University at Zhuhai, Zhuhai, China
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3
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Ma H, Pang W, Sun L, Xu W. Augmented weighting estimators for the additive rates model under multivariate recurrent event data with missing event type. Stat Med 2022; 41:4285-4298. [PMID: 35764592 DOI: 10.1002/sim.9509] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Revised: 04/06/2022] [Accepted: 04/12/2022] [Indexed: 11/10/2022]
Abstract
Multivariate recurrent event data are frequently encountered in biomedical and epidemiological studies when subjects experience multiple types of recurrent events. In practice, the event type information may be missing due to a variety of reasons. In this article, we consider a semiparametric additive rates model for multivariate recurrent event data with missing event types. We develop the augmented inverse probability weighting technique to handle event types that are missing at random. The nonparametric kernel-assisted proposals for the missing mechanisms are studied. The resulting estimator is shown to be consistent and asymptotically normal. Extensive simulation studies and a real data application are provided to illustrate the validity and practical utility of the proposed method.
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Affiliation(s)
- Huijuan Ma
- KLATASDS-MOE, Academy of Statistics and Interdisciplinary Sciences, East China Normal University, Shanghai, China
| | - Weicai Pang
- School of Statistics and Management, Shanghai University of Finance and Economics, Shanghai, China
| | - Liuquan Sun
- Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, China
| | - Wei Xu
- Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada
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4
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Du Y, Lv Y. A flexible additive-multiplicative transformation mean model for recurrent event data. COMMUN STAT-THEOR M 2022. [DOI: 10.1080/03610926.2020.1748654] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- Yanbin Du
- MOE-LCSM, School of Mathematics and Statistics, Hunan Normal University, Hunan, China
| | - Yuan Lv
- Key Laboratory of Molecular Epidemiology, Medical College of Hunan Normal University, Hunan, China
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5
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Zhang Z, Wang X, Peng Y. An additive hazards frailty model with semi-varying coefficients. LIFETIME DATA ANALYSIS 2022; 28:116-138. [PMID: 34820722 DOI: 10.1007/s10985-021-09540-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Accepted: 11/01/2021] [Indexed: 06/13/2023]
Abstract
Proportional hazards frailty models have been extensively investigated and used to analyze clustered and recurrent failure times data. However, the proportional hazards assumption in the models may not always hold in practice. In this paper, we propose an additive hazards frailty model with semi-varying coefficients, which allows some covariate effects to be time-invariant while other covariate effects to be time-varying. The time-varying and time-invariant regression coefficients are estimated by a set of estimating equations, whereas the frailty parameter is estimated by the moment method. The large sample properties of the proposed estimators are established. The finite sample performance of the estimators is examined by simulation studies. The proposed model and estimation are illustrated with an analysis of data from a rehospitalization study of colorectal cancer patients.
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Affiliation(s)
- Zhongwen Zhang
- School of Public Health and Management, Binzhou Medical University, Yantai, 264003, China
| | - Xiaoguang Wang
- School of Mathematical Sciences, Dalian University of Technology, Dalian, 116024, China
| | - Yingwei Peng
- Departments of Public Health Sciences and Mathematics and Statistics, Queen's University, Kingston, ON, Canada.
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6
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Ma C, Pan J. Multistate analysis of multitype recurrent event and failure time data with event feedbacks in biomarkers. Scand Stat Theory Appl 2021. [DOI: 10.1111/sjos.12545] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Chuoxin Ma
- Department of Mathematics The University of Manchester Manchester UK
| | - Jianxin Pan
- Department of Mathematics The University of Manchester Manchester UK
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7
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Lin FC, Cai J, Fine JP, Dellon EP, Esther CR. Semiparametric estimation of the proportional rates model for recurrent events data with missing event category. Stat Methods Med Res 2021; 30:1624-1639. [PMID: 34142905 PMCID: PMC8411467 DOI: 10.1177/09622802211023975] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Proportional rates models are frequently used for the analysis of recurrent event data with multiple event categories. When some of the event categories are missing, a conventional approach is to either exclude the missing data for a complete-case analysis or employ a parametric model for the missing event type. It is well known that the complete-case analysis is inconsistent when the missingness depends on covariates, and the parametric approach may incur bias when the model is misspecified. In this paper, we aim to provide a more robust approach using a rate proportion method for the imputation of missing event types. We show that the log-odds of the event type can be written as a semiparametric generalized linear model, facilitating a theoretically justified estimation framework. Comprehensive simulation studies were conducted demonstrating the improved performance of the semiparametric method over parametric procedures. Multiple types of Pseudomonas aeruginosa infections of young cystic fibrosis patients were analyzed to demonstrate the feasibility of our proposed approach.
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Affiliation(s)
- Feng-Chang Lin
- Department of Biostatistics, University of North Carolina at
Chapel Hill, NC, USA
| | - Jianwen Cai
- Department of Biostatistics, University of North Carolina at
Chapel Hill, NC, USA
| | - Jason P Fine
- Department of Biostatistics, University of North Carolina at
Chapel Hill, NC, USA
| | - Elisabeth P Dellon
- Department of Medicine, University of North Carolina at Chapel
Hill, NC, USA
| | - Charles R Esther
- Department of Medicine, University of North Carolina at Chapel
Hill, NC, USA
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8
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Spreafico M, Ieva F. Functional modeling of recurrent events on time-to-event processes. Biom J 2021; 63:948-967. [PMID: 33738841 DOI: 10.1002/bimj.202000374] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Revised: 02/15/2021] [Accepted: 02/22/2021] [Indexed: 12/20/2022]
Abstract
In clinical practice, it is often the case where the association between the occurrence of events and time-to-event outcomes is of interest; thus, it can be modeled within the framework of recurrent events. The purpose of our study is to enrich the information available for modeling survival with relevant dynamic features, properly taking into account their possibly time-varying nature, as well as to provide a new setting for quantifying the association between time-varying processes and time-to-event outcomes. We propose an innovative methodology to model information carried out by time-varying processes by means of functional data, modeling each time-varying variable as the compensator of marked point process the recurrent events are supposed to derive from. By means of Functional Principal Component Analysis, a suitable dimensional reduction of these objects is carried out in order to plug them into a Cox-type functional regression model for overall survival. We applied our methodology to data retrieved from the administrative databases of Lombardy Region (Italy), related to patients hospitalized for Heart Failure (HF) between 2000 and 2012. We focused on time-varying processes of HF hospitalizations and multiple drugs consumption and we studied how they influence patients' overall survival. This novel way to account for time-varying variables allowed to model self-exciting behaviors, for which the occurrence of events in the past increases the probability of a new event, and to quantify the effect of personal behaviors and therapeutic patterns on survival, giving new insights into the direction of personalized treatment.
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Affiliation(s)
- Marta Spreafico
- MOX - Laboratory for Modeling and Scientific Computing, Department of Mathematics, Politecnico di Milano, Milan, Italy.,CHRP - National Center for Healthcare Research and Pharmacoepidemiology, University of Milano-Bicocca, Milan, Italy
| | - Francesca Ieva
- MOX - Laboratory for Modeling and Scientific Computing, Department of Mathematics, Politecnico di Milano, Milan, Italy.,CHRP - National Center for Healthcare Research and Pharmacoepidemiology, University of Milano-Bicocca, Milan, Italy.,CADS - Center for Analysis Decisions and Society, Human Technopole, Milan, Italy
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9
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Lin FC, Cai J, Deng Y, Esther CR. Inverse probability weighted estimation for recurrent events data with missing category. Stat Med 2021; 40:2765-2782. [PMID: 33660283 DOI: 10.1002/sim.8927] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2019] [Revised: 11/05/2020] [Accepted: 02/10/2021] [Indexed: 11/07/2022]
Abstract
Modeling recurrent event data with multiple event types has drawn interest in recent biomedical studies due to its flexibility for understanding different risk factors for multiple recurrent event processes. However, in such data type, missing event type appears frequently because of various reasons such as recording ignorance or resource limitation. In this study, we aim to propose an inverse probability weighted estimation that is commonly used in the missing data literature to correct possibly biased estimation by a complete-case analysis. This approach is not limited to a specific form of the recurrent event model. We derive the large sample theory in a general form. We demonstrate that our approach can be applied to either multiplicative or additive rates model with practical sample size via comprehensive simulations. Nonmucoid and mucoid Pseudomonas aeruginosa infections of 14 888 patients in 2016 Cystic Fibrosis Foundation Patient Registry data are analyzed to show that, without including 12% events with missing event type in the analysis, several factors may be misidentified as risk factors for the nonmucoid type of infections.
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Affiliation(s)
- Feng-Chang Lin
- Department of Biostatistics, University of North Carolina, Chapel Hill, North Carolina, USA
| | - Jianwen Cai
- Department of Biostatistics, University of North Carolina, Chapel Hill, North Carolina, USA
| | - Yu Deng
- Department of Biostatistics, University of North Carolina, Chapel Hill, North Carolina, USA
| | - Charles R Esther
- Pediatric Pulmonology, University of North Carolina, Chapel Hill, North Carolina, USA
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10
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Analysis of cyclic recurrent event data with multiple event types. JAPANESE JOURNAL OF STATISTICS AND DATA SCIENCE 2020; 4:895-915. [DOI: 10.1007/s42081-020-00088-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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11
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Sun X, Ding J, Sun L. A semiparametric additive rates model for the weighted composite endpoint of recurrent and terminal events. LIFETIME DATA ANALYSIS 2020; 26:471-492. [PMID: 31549283 DOI: 10.1007/s10985-019-09486-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2018] [Accepted: 09/17/2019] [Indexed: 06/10/2023]
Abstract
Recurrent event data with a terminal event commonly arise in longitudinal follow-up studies. We use a weighted composite endpoint of all recurrent and terminal events to assess the overall effects of covariates on the two types of events. A semiparametric additive rates model is proposed to analyze the weighted composite event process and the dependence structure among recurrent and terminal events is left unspecified. An estimating equation approach is developed for inference, and the asymptotic properties of the resulting estimators are established. The finite-sample behavior of the proposed estimators is evaluated through simulation studies, and an application to a bladder cancer study is illustrated.
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Affiliation(s)
- Xiaowei Sun
- Institute of Applied Mathematics, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, 100190, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Jieli Ding
- School of Mathematics and Statistics, Wuhan University, Wuhan, 430072, Hubei, China
| | - Liuquan Sun
- Institute of Applied Mathematics, Academy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, 100190, China.
- University of Chinese Academy of Sciences, Beijing, 100049, China.
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12
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Lee J, Cook RJ. Dependence modeling for multi-type recurrent events via copulas. Stat Med 2019; 38:4066-4082. [PMID: 31236985 DOI: 10.1002/sim.8283] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2018] [Revised: 04/18/2019] [Accepted: 05/29/2019] [Indexed: 11/10/2022]
Abstract
When several types of recurrent events may arise, interest often lies in marginal modeling and studying the nature of the dependence structure. In this paper, we propose a multivariate mixed-Poisson model with the dependence between events accommodated by type-specific random effects which are associated through use of a Gaussian copula. Such models retain marginal features with a simple interpretation, reflect the heterogeneity in risk for each type of event, and provide insight into the dependence between the different types of events. Semiparametric inference is proposed based on composite likelihood to avoid high dimensional integration. An application to a study of nutritional supplements in malnourished children is given in which the goal is to evaluate the reduction in the rate of several different kinds of infection.
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Affiliation(s)
- Jooyoung Lee
- Department of Statistics and Actuarial Science, University of Waterloo, ON, Canada
| | - Richard J Cook
- Department of Statistics and Actuarial Science, University of Waterloo, ON, Canada
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13
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Abstract
Recurrent event outcomes are ubiquitous among clinical trial data which encourages a conventional approach to analysis. Yet a common feature of these data has received less attention, that is, survival times often comprise multiple types of events that may imply a disparity in cost and disease severity. Typically, we neglect this feature of the data by combining event-types or analyzing each type separately, thus ignoring any interdependence among them. This practice may reflect a dearth of readily available methods and software that more appropriately acknowledge the true data structure. We provide a review of the literature on multitype recurrent events and frailty modelling which reflects a renewed interest in the topic over the past decade and the emergence of software for estimation. Thus, a review of available methods seems timely, if not overdue.
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Affiliation(s)
- Paul M Brown
- Department of Medicine, University of Alberta, Edmonton, Canada
- Canadian VIGOUR Centre, Edmonton, Canada
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14
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Partial sufficient dimension reduction on additive rates model for recurrent event data with high-dimensional covariates. Stat Pap (Berl) 2017. [DOI: 10.1007/s00362-017-0949-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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15
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Ye P, Zhao X, Sun L, Xu W. A semiparametric additive rates model for multivariate recurrent events with missing event categories. Comput Stat Data Anal 2015. [DOI: 10.1016/j.csda.2015.03.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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16
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Ning J, Chen Y, Cai C, Huang X, Wang MC. On the dependence structure of bivariate recurrent event processes: inference and estimation. Biometrika 2015. [DOI: 10.1093/biomet/asu073] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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