1
|
Amin F, Khan MS, Bano B. Mammalian cystatin and protagonists in brain diseases. J Biomol Struct Dyn 2019; 38:2171-2196. [DOI: 10.1080/07391102.2019.1620636] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Fakhra Amin
- Department of Zoology, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, India
| | - Mohd Shahnawaz Khan
- Department of Biochemistry, College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Bilqees Bano
- Department of Biochemistry, Faculty of Life Sciences, Aligarh MuslimUniversity, Aligarh, India
| |
Collapse
|
2
|
Purification and characterization of a cystatin like thiol protease inhibitor from Brassica nigra. Int J Biol Macromol 2019; 125:1128-1139. [DOI: 10.1016/j.ijbiomac.2018.12.169] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2018] [Revised: 12/17/2018] [Accepted: 12/18/2018] [Indexed: 11/19/2022]
|
3
|
Biochemical, immunological and kinetic characterization and partial sequence analysis of a thiol proteinase inhibitor from Bubalus bubalis kidney: An attempt targeting kidney disorders. Int J Biol Macromol 2017; 94:819-826. [DOI: 10.1016/j.ijbiomac.2015.12.084] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2015] [Revised: 11/09/2015] [Accepted: 12/28/2015] [Indexed: 11/19/2022]
|
4
|
Siddiqui AA, Khaki PSS, Sohail A, Sarwar T, Bano B. Isolation and purification of phytocystatin from almond: Biochemical, biophysical, and immunological characterization. ACTA ACUST UNITED AC 2016. [DOI: 10.1080/23312025.2016.1262489] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Azad Alam Siddiqui
- Faculty of Life Sciences, Department of Biochemistry, Aligarh Muslim University, Aligarh, Uttar Pradesh 202002, India
| | - Peerzada Shariq Shaheen Khaki
- Faculty of Life Sciences, Department of Biochemistry, Aligarh Muslim University, Aligarh, Uttar Pradesh 202002, India
| | - Aamir Sohail
- Faculty of Life Sciences, Department of Biochemistry, Aligarh Muslim University, Aligarh, Uttar Pradesh 202002, India
| | - Tarique Sarwar
- Department of Biosciences, Jamia Millia Islamia, New Delhi 110025, India
| | - Bilqees Bano
- Faculty of Life Sciences, Department of Biochemistry, Aligarh Muslim University, Aligarh, Uttar Pradesh 202002, India
| |
Collapse
|
5
|
Khaki PSS, Feroz A, Amin F, Rehman MT, Bhat WF, Bano B. Structural and functional studies on a variant of cystatin purified from brain of Capra hircus. J Biomol Struct Dyn 2016; 35:1693-1709. [DOI: 10.1080/07391102.2016.1191375] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
| | - Anna Feroz
- Faculty of Life Sciences, Department of Biochemistry, AMU, Aligarh, Uttar Pradesh 202002, India
| | - Fakhra Amin
- Faculty of Life Sciences, Department of Zoology, AMU, Aligarh, Uttar Pradesh 202002, India
| | - Md Tabish Rehman
- Medical Microbiology and Molecular Biology Laboratory, Interdisciplinary Biotechnology Unit, AMU, Aligarh, Uttar Pradesh 202002, India
- Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh 11451, Saudi Arabia
| | - Waseem Feeroze Bhat
- Faculty of Life Sciences, Department of Biochemistry, AMU, Aligarh, Uttar Pradesh 202002, India
| | - Bilqees Bano
- Faculty of Life Sciences, Department of Biochemistry, AMU, Aligarh, Uttar Pradesh 202002, India
| |
Collapse
|
6
|
Khan S, Ahmad S, Siddiqi MI, Bano B. Physico-chemical and in-silico analysis of a phytocystatin purified from Brassica juncea cultivar RoAgro 5444. Biochem Cell Biol 2016; 94:584-596. [PMID: 27845561 DOI: 10.1139/bcb-2016-0029] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
This study describes the isolation and purification of a phytocystatin from seeds of Brassica juncea (Indian mustard; cultivar RoAgro 5444), which is an important oilseed crop both agriculturally and economically. The protein was purified by gel filtration chromatography with 24.3% yield and 204-fold purification, and visualised by 2D gel electrophoresis. The 18.1 kDa mustard cystatin was highly specific for cysteine proteinases. The plant cystatin inhibited cathepsin B, confirming its role in conferring pest resistance. The inhibitor was highly stable over a pH range of 3-10 and retained significant inhibitory potential up to 70 °C. The stoichiometry of its interaction with papain, determined by isothermal calorimetry, suggests a 1:1 complex. Secondary structural elements calculated by far-UV circular dichroism (CD) spectroscopy show an 18.8% α-helical and 21% β-sheet structure. The protein was a non-competitive inhibitor of thiol proteinases. The Stokes radius and frictional co-efficient were used to describe the shape and size of the protein. Homology modelling and docking studies proposed a prototype illustrating the Brassica phytocystatin mediated papain inhibition. Molecular dynamics (MD) study revealed the excellent stability of the papain-phytocystatin complex during a simulation for 100 ns. Detailed results identify the mustard cystatin as an important member of the phytocystatin family.
Collapse
Affiliation(s)
- Shumaila Khan
- a Department of Biochemistry, Faculty of Life Science, Aligarh Muslim University, Aligarh 202002, India
| | - Sabahuddin Ahmad
- b Molecular and Structural Biology Division, Council of Scientific and Industrial Research-Central Drug Research Institute (CSIR-CDRI), Lucknow 226031, Uttar Pradesh, India
| | - Mohammad Imran Siddiqi
- b Molecular and Structural Biology Division, Council of Scientific and Industrial Research-Central Drug Research Institute (CSIR-CDRI), Lucknow 226031, Uttar Pradesh, India
| | - Bilqees Bano
- a Department of Biochemistry, Faculty of Life Science, Aligarh Muslim University, Aligarh 202002, India
| |
Collapse
|
7
|
Shamsi A, Ahmed A, Bano B. Glyoxal induced structural transition of buffalo kidney cystatin to molten globule and aggregates: Anti-fibrillation potency of quinic acid. IUBMB Life 2016; 68:156-66. [DOI: 10.1002/iub.1471] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2015] [Accepted: 12/20/2015] [Indexed: 11/09/2022]
Affiliation(s)
- Anas Shamsi
- Department of Biochemistry, Faculty of Life Sciences; Aligarh Muslim University; Aligarh Uttar Pradesh India
| | - Azaj Ahmed
- Department of Biochemistry, Faculty of Life Sciences; Aligarh Muslim University; Aligarh Uttar Pradesh India
| | - Bilqees Bano
- Department of Biochemistry, Faculty of Life Sciences; Aligarh Muslim University; Aligarh Uttar Pradesh India
| |
Collapse
|
8
|
Ahmed A, Shamsi A, Bano B. Purification and biochemical characterization of phytocystatin from Brassica alba. J Mol Recognit 2016; 29:223-31. [PMID: 26748819 DOI: 10.1002/jmr.2522] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2015] [Revised: 10/24/2015] [Accepted: 10/26/2015] [Indexed: 11/10/2022]
Abstract
Phytocystatins belong to the family of cysteine proteinases inhibitors. They are ubiquitously found in plants and carry out various significant physiological functions. These plant derived inhibitors are gaining wide consideration as potential candidate in engineering transgenic crops and in drug designing. Hence it is crucial to identify these inhibitors from various plant sources. In the present study a phytocystatin has been isolated and purified by a simple two-step procedure using ammonium sulfate saturation and gel filtration chromatography on Sephacryl S-100HR from Brassica alba seeds (yellow mustard seeds).The protein was purified to homogeneity with 60.3% yield and 180-fold of purification. The molecular mass of the mustard seed cystatin was estimated to be nearly 26,000 Da by sodium dodecyl sulfate polyacrylamide gel electrophoresis as well as by gel filtration chromatography. The stokes radius and diffusion coefficient of the mustard cystatin were found to be 23A° and 9.4 × 10(-7) cm(2) s(-1) respectively. The isolated phytocystatin was found to be stable in the pH range of 6-8 and is thermostable up to 60 °C. Kinetic analysis revealed that the phytocystatin exhibited non-competitive type of inhibition and inhibited papain more efficiently (K(i) = 3 × 10(-7) M) than ficin (K(i) = 6.6 × 10(-7) M) and bromelain (K(i) = 7.7 × 10(-7) M respectively). CD spectral analysis shows that it possesses 17.11% alpha helical content.
Collapse
Affiliation(s)
- Azaj Ahmed
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, 202002, India
| | - Anas Shamsi
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, 202002, India
| | - Bilqees Bano
- Department of Biochemistry, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, 202002, India
| |
Collapse
|
9
|
Biochemical, Immunological and Kinetic Characterisation of Thiol Protease Inhibitor (Cystatin) from Liver. Appl Biochem Biotechnol 2013; 171:667-75. [DOI: 10.1007/s12010-013-0383-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2013] [Accepted: 07/01/2013] [Indexed: 11/30/2022]
|
10
|
Sumbul S, Khan MS, Bano B. [Effect of curcumin on nitric oxide induced structural and functional modifications of high molecular weight cystatin from the goat brain]. BIOMEDIT︠S︡INSKAI︠A︡ KHIMII︠A︡ 2011; 56:209-19. [PMID: 21341509 DOI: 10.18097/pbmc20105602209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Cystatins are thiol proteinase inhibitors ubiquitously present in the mammalian body. In brain, they prevent unwanted proteolysis and are involved in several neurodegenerative diseases. Under physiological conditions nitric oxide can be found in almost all the tissues, but under pathological conditions NO has damaging effects. Its increased concentration, under various neural diseases leads to cell damage through formation of highly reactive peroxynitrite. Our present study was designed to investigate the protective effect of curcumin against NO induced damage of HM-GBC. NO caused intensive structural and functional damage of HM-GBC, resulting in 89% loss of its antiproteolytic activity after 2 h of incubation. Structural damage occurs in the form of protein degradation. Curcumin significantly protected HM-GBC against this damage. This suggests that curcumin has a significant potential in the treatment of diseases caused by nitrogen free radicals and this potential must be further explored for the development of novel drugs.
Collapse
|
11
|
Khan MS, Bano B. Purification, characterization and kinetics of thiol protease inhibitor from goat (Capra hircus) lung. BIOCHEMISTRY (MOSCOW) 2009; 74:781-8. [DOI: 10.1134/s0006297909070116] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
|
12
|
Cystatin like thiol proteinase inhibitor from pancreas of Capra hircus: purification and detailed biochemical characterization. Amino Acids 2009; 38:1001-10. [DOI: 10.1007/s00726-009-0308-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2009] [Accepted: 05/14/2009] [Indexed: 01/31/2023]
|
13
|
Sumbul S, Bano B. Alkaline-induced unfolding of high and low molecular mass goat brain cystatins and their refolding in presence of salts. NEUROCHEM J+ 2009. [DOI: 10.1134/s1819712409020081] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
|