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Asimakoula S, Marinakos O, Tsagogiannis E, Koukkou AI. Phenol Degradation by Pseudarthrobacter phenanthrenivorans Sphe3. Microorganisms 2023; 11:microorganisms11020524. [PMID: 36838489 PMCID: PMC9966258 DOI: 10.3390/microorganisms11020524] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Revised: 02/13/2023] [Accepted: 02/17/2023] [Indexed: 02/22/2023] Open
Abstract
Phenol poses a threat as one of the most important industrial environmental pollutants that must be removed before disposal. Biodegradation is a cost-effective and environmentally friendly approach for phenol removal. This work aimed at studying phenol degradation by Pseudarthrobacter phenanthrenivorans Sphe3 cells and also, investigating the pathway used by the bacterium for phenol catabolism. Moreover, alginate-immobilized Sphe3 cells were studied in terms of phenol degradation efficiency compared to free cells. Sphe3 was found to be capable of growing in the presence of phenol as the sole source of carbon and energy, at concentrations up to 1500 mg/L. According to qPCR findings, both pathways of ortho- and meta-cleavage of catechol are active, however, enzymatic assays and intermediate products identification support the predominance of the ortho-metabolic pathway for phenol degradation. Alginate-entrapped Sphe3 cells completely degraded 1000 mg/L phenol after 192 h, even though phenol catabolism proceeds slower in the first 24 h compared to free cells. Immobilized Sphe3 cells retain phenol-degrading capacity even after 30 days of storage and also can be reused for at least five cycles retaining more than 75% of the original phenol-catabolizing capacity.
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Duraisamy P, Sekar J, Arunkumar AD, Ramalingam PV. Kinetics of Phenol Biodegradation by Heavy Metal Tolerant Rhizobacteria Glutamicibacter nicotianae MSSRFPD35 From Distillery Effluent Contaminated Soils. Front Microbiol 2020; 11:1573. [PMID: 32760369 PMCID: PMC7373764 DOI: 10.3389/fmicb.2020.01573] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Accepted: 06/17/2020] [Indexed: 11/13/2022] Open
Abstract
Biodegradation of phenol using bacteria is recognized as an efficient, environmentally friendly and cost-effective approach for reducing phenol pollutants compared to the current conventional physicochemical processes adopted. A potential phenol degrading bacterial strain Glutamicibacter nicotianae MSSRFPD35 was isolated and identified from Canna indica rhizosphere grown in distillery effluent contaminated sites. It showed high phenol degrading efficiency up to 1117 mg L–1 within 60 h by the secretion of catechol 1,2-dioxygenase via ortho intradial pathway. The strain MSSRFPD35 possess both the catechol 1,2 dioxygenase and catechol 2,3 dioxygenase coding genes that drive the ortho and meta pathways, but the enzymatic assay revealed that the strain cleaves catechol via ortho pathway. Haldane’s kinetic method was well fit to exponential growth data and the following kinetic parameter was obtained: μ∗ = 0.574 h–1, Ki = 268.1, Ks = 20.29 mg L–1. The true μmax and Sm were calculated as 0.37 h–1 and 73.76 mg L–1, respectively. The Haldane’s constant values were similar to earlier studies and healthy fitness depicted in correlation coefficient value R2 of 0.98. Phenol degrading kinetic’s was predicted using Haldane’s model as qmax 0.983, Ki′ 517.5 and Ks′ 9.152. Further, MSSRFPD35 was capable of utilizing different monocyclic and polycyclic aromatic hydrocarbons and to degrade phenol in the presence of different heavy metals. This study for the first time reports high phenol degrading efficiency of G. nicotianae MSSRFPD35 in the presence of toxic heavy metals. Thus, the strain G. nicotianae MSSRFPD35 can be exploited for the bioremediation of phenol and its derivatives polluted environments, co-contaminated with heavy metals.
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Affiliation(s)
- Purushothaman Duraisamy
- Microbiology Lab, Biotechnology Programme, M. S. Swaminathan Research Foundation, Chennai, India
| | - Jegan Sekar
- Microbiology Lab, Biotechnology Programme, M. S. Swaminathan Research Foundation, Chennai, India
| | - Anu D Arunkumar
- Microbiology Lab, Biotechnology Programme, M. S. Swaminathan Research Foundation, Chennai, India
| | - Prabavathy V Ramalingam
- Microbiology Lab, Biotechnology Programme, M. S. Swaminathan Research Foundation, Chennai, India
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Li H, Meng F, Duan W, Lin Y, Zheng Y. Biodegradation of phenol in saline or hypersaline environments by bacteria: A review. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2019; 184:109658. [PMID: 31520955 DOI: 10.1016/j.ecoenv.2019.109658] [Citation(s) in RCA: 57] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2019] [Revised: 07/27/2019] [Accepted: 09/05/2019] [Indexed: 06/10/2023]
Abstract
With the continuous demand from industry for chemical raw materials, a large amount of high-salinity wastewater containing phenol is discharged into the aquatic environment, and the leakage of dangerous chemicals into the sea may lead to phenol pollution of the ocean. Phenol is a common chemical posing serious environmental hazard. Biodegradation is an effective, low-cost, environment-friendly method of removing phenol from water, but in hypersaline environments, traditional freshwater organisms are less efficacious. Here, at least 17 genera of bacteria from three phyla are found that can degrade phenol in different saline environments. The sources and taxonomy of halotolerant and halophilic bacteria are reviewed. Moreover, the pathway of phenol removal, kinetics of biodegradation, influencing factors, and recent treatment processes of wastewater are discussed.
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Affiliation(s)
- Hao Li
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Qingdao, 266100, China
| | - Fanping Meng
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Qingdao, 266100, China; College of Environmental Science and Engineering, Ocean University of China, Qingdao, 266100, China.
| | - Weiyan Duan
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Qingdao, 266100, China
| | - Yufei Lin
- National Marine Hazard Mitigation Service, Ministry of Natural Resource of the People's Republic of China, Beijing, 100194, China
| | - Yang Zheng
- Key Laboratory of Marine Environment and Ecology, Ministry of Education, Qingdao, 266100, China; College of Environmental Science and Engineering, Ocean University of China, Qingdao, 266100, China; National Marine Hazard Mitigation Service, Ministry of Natural Resource of the People's Republic of China, Beijing, 100194, China
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Carrera P, Campo R, Méndez R, Di Bella G, Campos JL, Mosquera-Corral A, Val Del Rio A. Does the feeding strategy enhance the aerobic granular sludge stability treating saline effluents? CHEMOSPHERE 2019; 226:865-873. [PMID: 30978598 DOI: 10.1016/j.chemosphere.2019.03.127] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2018] [Revised: 03/11/2019] [Accepted: 03/19/2019] [Indexed: 06/09/2023]
Abstract
The development and stability of aerobic granular sludge (AGS) was studied in two Sequencing Batch Reactors (SBRs) treating fish canning wastewater. R1 cycle comprised a fully aerobic reaction phase, while R2 cycle included a plug-flow anaerobic feeding/reaction followed by an aerobic reaction phase. The performance of the AGS reactors was compared treating the same effluents with variable salt concentrations (4.97-13.45 g NaCl/L) and organic loading rates (OLR, 1.80-6.65 kg CODs/(m3·d)). Granulation process was faster in R2 (day 34) than in R1 (day 90), however the granular biomass formed in the fully aerobic configuration was more stable to the variable feeding composition. Thus, in R1 solid retention times (SRT), up to 15.2 days, longer than in R2, up to 5.8 days, were achieved. These long SRTs values helped the retention of nitrifying organisms and provoked the increase of the nitrogen removal efficiency to 80% in R1 while it was approximately of 40% in R2. However, the presence of an anaerobic feeding/reaction phase increased the organic matter removal efficiency in R2 (80-90%) which was higher than in R1 with a fully aerobic phase (75-85%). Furthermore, in R2 glycogen-accumulating organisms (GAOs) dominated inside the granules instead of phosphorous-accumulating organisms (PAOs), suggesting that GAOs resist better the stressful conditions of a variable and high-saline influent. In terms of AGS properties an anaerobic feeding/reaction phase is not beneficial, however it enables the production of a better quality effluent.
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Affiliation(s)
- P Carrera
- Department of Chemical Engineering, School of Engineering, Universidade de Santiago de Compostela, E-15782, Santiago de Compostela, Galicia, Spain.
| | - R Campo
- Dipartimento di Ingegneria Civile e Ambientale - DICEA, Università degli Studi di Firenze, 50139 Firenze, Italy.
| | - R Méndez
- Department of Chemical Engineering, School of Engineering, Universidade de Santiago de Compostela, E-15782, Santiago de Compostela, Galicia, Spain.
| | - G Di Bella
- Facoltà di Ingegneria e Architettura, Università degli Studi di Enna "Kore'', Cittadella Universitaria, 94100 Enna, Italy.
| | - J L Campos
- Facultad de Ingeniería y Ciencias, Universidad Adolfo Ibáñez, Avda. Padre Hurtado 750, Viña del Mar, Chile.
| | - A Mosquera-Corral
- Department of Chemical Engineering, School of Engineering, Universidade de Santiago de Compostela, E-15782, Santiago de Compostela, Galicia, Spain.
| | - A Val Del Rio
- Department of Chemical Engineering, School of Engineering, Universidade de Santiago de Compostela, E-15782, Santiago de Compostela, Galicia, Spain.
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Guo X, Xie C, Wang L, Li Q, Wang Y. Biodegradation of persistent environmental pollutants by Arthrobacter sp. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2019; 26:8429-8443. [PMID: 30706270 DOI: 10.1007/s11356-019-04358-0] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Accepted: 01/23/2019] [Indexed: 05/17/2023]
Abstract
Persistent environmental pollutants are a growing problem around the world. The effective control of the pollutants is of great significance for human health. Some microbes, especially Arthrobacter, can degrade pollutants into nontoxic substances in various ways. Here, we review the biological properties of Arthrobacter adapting to a variety of environmental stresses, including starvation, hypertonic and hypotonic condition, oxidative stress, heavy metal stress, and low-temperature stress. Furthermore, we categorized the Arthrobacter species that can degrade triazines, organophosphorus, alkaloids, benzene, and its derivatives. Metabolic pathways behind the various biodegradation processes are further discussed. This review will be a helpful reference for comprehensive utilization of Arthrobacter species to tackle environmental pollutants.
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Affiliation(s)
- Xiaohong Guo
- College of Veterinary Medicine, Northwest A&F University, No. 22 Xinong Road, Yangling, 712100, Shaanxi, China
| | - Chengyun Xie
- College of Veterinary Medicine, Northwest A&F University, No. 22 Xinong Road, Yangling, 712100, Shaanxi, China
| | - Lijuan Wang
- College of Veterinary Medicine, Northwest A&F University, No. 22 Xinong Road, Yangling, 712100, Shaanxi, China
| | - Qinfan Li
- College of Veterinary Medicine, Northwest A&F University, No. 22 Xinong Road, Yangling, 712100, Shaanxi, China
| | - Yan Wang
- College of Veterinary Medicine, Northwest A&F University, No. 22 Xinong Road, Yangling, 712100, Shaanxi, China.
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Liu J, Shi S, Ji X, Jiang B, Xue L, Li M, Tan L. Performance and microbial community dynamics of electricity-assisted sequencing batch reactor (SBR) for treatment of saline petrochemical wastewater. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2017; 24:17556-17565. [PMID: 28597382 DOI: 10.1007/s11356-017-9446-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2016] [Accepted: 06/01/2017] [Indexed: 06/07/2023]
Abstract
High-salinity wastewater is often difficult to treat by common biological technologies due to salinity stress on the bacterial community. Electricity-assisted anaerobic technologies have significantly enhanced the treatment performance by alleviating the impact of salinity stress on the bacterial community, but electricity-assisted aerobic technologies have less been reported. Herein, a novel bio-electrochemistry system has been designed and operated in which a pair of stainless iron mesh-graphite plate electrodes were installed into a sequencing batch reactor (SBR, designated as S1) to strengthen the performance of saline petrochemical wastewater under aerobic conditions. The removal efficiency of phenol and chemical oxygen demand (COD) in S1 were 94.1 and 91.2%, respectively, on day 45, which was clearly higher than the removal efficiency of a single SBR (S2) and an electrochemical reactor (S3), indicating that a coupling effect existed between the electrochemical process and biodegradation. A certain amount of salinity (≤8000 mg/L) could enhance the treatment performance in S1 but weaken that in S2. Illumina sequencing revealed that microbial communities in S1 on days 45 and 91 were richer and more diverse than in S2, which suggests that electrical stimulation could enhance the diversity and richness of the microbial community, and reduce the negative effect of salinity on the microorganisms and enrich some salt-adapted microorganisms, thus improve the ability of S1 to respond to salinity stress. This novel bio-electrochemistry system was shown to be an alternative technology for the high saline petrochemical wastewater.
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Affiliation(s)
- Jiaxin Liu
- School of Life Science, Liaoning Normal University, Dalian, 116081, China
| | - Shengnan Shi
- School of Life Science, Liaoning Normal University, Dalian, 116081, China.
| | - Xiangyu Ji
- School of Life Science, Liaoning Normal University, Dalian, 116081, China
| | - Bei Jiang
- School of Life Science, Liaoning Normal University, Dalian, 116081, China.
- Liaoning Key Lab of Marine Fishery Molecular Biology, Liaoning Ocean and Fisheries Science Research Institute, Dalian, 116023, China.
| | - Lanlan Xue
- School of Life Science, Liaoning Normal University, Dalian, 116081, China
| | - Meidi Li
- School of Life Science, Liaoning Normal University, Dalian, 116081, China
| | - Liang Tan
- School of Life Science, Liaoning Normal University, Dalian, 116081, China
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7
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Jiang B, Shi S, Song L, Tan L, Li M, Liu J, Xue L. Efficient treatment of phenolic wastewater with high salinity using a novel integrated system of magnetically immobilized cells coupling with electrodes. BIORESOURCE TECHNOLOGY 2016; 218:108-114. [PMID: 27347805 DOI: 10.1016/j.biortech.2016.06.080] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2016] [Revised: 06/17/2016] [Accepted: 06/19/2016] [Indexed: 06/06/2023]
Abstract
A novel integrated system in which magnetically immobilized cells coupled with a pair of stainless iron meshes-graphite plate electrodes has been designed and operated to enhance the treatment performance of phenolic wastewater under high salinity. With NaCl concentration increased, phenol, o-cresol, m-cresol, p-cresol and COD removal rates by integrated system increased significantly, which were obviously higher than the sum of removal rates by single magnetically immobilized cells and electrode reaction. This integrated system exhibited higher removal rates for all the compounds than that by single magnetically immobilized cells during six cycles for reuse, and it still performed better, even when the voltage was cut off. These results indicated that there was a coupling effect between biodegradation and electrode reaction. The investigation of phenol hydroxylase activity and cells concentration confirmed that electrode reaction played an important role in this coupling effect.
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Affiliation(s)
- Bei Jiang
- School of Life Science, Liaoning Normal University, Dalian 116081, China; Liaoning Key Lab of Marine Fishery Molecular Biology, Liaoning Ocean and Fisheries Science Research Institute, Dalian 116023, China
| | - Shengnan Shi
- School of Life Science, Liaoning Normal University, Dalian 116081, China.
| | - Lun Song
- Liaoning Key Lab of Marine Fishery Molecular Biology, Liaoning Ocean and Fisheries Science Research Institute, Dalian 116023, China
| | - Liang Tan
- School of Life Science, Liaoning Normal University, Dalian 116081, China
| | - Meidi Li
- School of Life Science, Liaoning Normal University, Dalian 116081, China
| | - Jiaxin Liu
- School of Life Science, Liaoning Normal University, Dalian 116081, China
| | - Lanlan Xue
- School of Life Science, Liaoning Normal University, Dalian 116081, China
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8
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Xenofontos E, Tanase AM, Stoica I, Vyrides I. Newly isolated alkalophilic Advenella species bioaugmented in activated sludge for high p-cresol removal. N Biotechnol 2016; 33:305-10. [DOI: 10.1016/j.nbt.2015.11.003] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2014] [Revised: 09/05/2015] [Accepted: 11/06/2015] [Indexed: 10/22/2022]
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Shi S, Qu Y, Zhou H, Ma Q, Ma F. Characterization of a novel cometabolic degradation carbazole pathway by a phenol-cultivated Arthrobacter sp. W1. BIORESOURCE TECHNOLOGY 2015; 193:281-287. [PMID: 26142994 DOI: 10.1016/j.biortech.2015.06.106] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2015] [Revised: 06/17/2015] [Accepted: 06/19/2015] [Indexed: 06/04/2023]
Abstract
Arthrobacter sp. W1 was used to characterize the pathways involved in cometabolic degradation of carbazole (CA) with phenol as the primary substrate. To clarify the upper pathway of cometabolic degradation CA, Escherichia coli strain BL21 expressing phenol hydroxylase from strain W1 (PHIND) was investigated to degrade CA. Firstly, CA was initially monohydroxylated at C-2 and C-4 positions to produce 2- and 4-hydroxycarbazole, followed by successively hydroxylated to the corresponding 1,2- and 3,4-dihydroxycarbazole, of which 3,4-dihydroxycarbazole was unequivocally identified for the first time. To characterize the downstream cometabolic degradation CA pathway, purified 3,4-dihydroxycarbazole was used as the substrate for phenol-grown W1, and a series of novel indole derivatives were identified. These results suggested that a novel pathway of CA catabolism was employed by strain W1 via a successive hydroxylation and meta-cleavage pathway. These findings provide new insights into the cometabolic degradation CA process and have potential applications in biotechnology and bioremediation.
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Affiliation(s)
- Shengnan Shi
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China; School of Life Science, Liaoning Normal University, Dalian 116081, China
| | - Yuanyuan Qu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Hao Zhou
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Qiao Ma
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Fang Ma
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China.
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Shi S, Qu Y, Ma Q, Zhang X, Zhou J, Ma F. Performance and microbial community dynamics in bioaugmented aerated filter reactor treating with coking wastewater. BIORESOURCE TECHNOLOGY 2015; 190:159-166. [PMID: 25935396 DOI: 10.1016/j.biortech.2015.04.075] [Citation(s) in RCA: 60] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2015] [Revised: 04/17/2015] [Accepted: 04/21/2015] [Indexed: 06/04/2023]
Abstract
In this study, zeolite-biological aerated filters (Z-BAFs) bioaugmented by free and magnetically immobilized cells of Arthrobacter sp. W1 were designed to treat coking wastewater containing high concentrations of phenol and naphthalene along with carbazole (CA), dibenzofuran (DBF), and dibenzothiophene (DBT). All treatments were carried out for a period of 100days and the data indicated that bioaugmented Z-BAFs with magnetically immobilized cells was most efficient for treating coking wastewaters. Illumina high-throughput sequencing was used to reveal the microbial community structures of Z-BAFs. Both bioaugmentation treatments could accelerate the shift of the bacterial community structures. The introduced strain W1 remained dominant in the bioaugmented Z-BAFs with magnetically immobilized cells, indicating both strain W1 and the indigenous degrading bacteria played the most significant role in the treatment. Overall, bioaugmented Z-BAF with magnetically immobilized cells can be used to efficiently degrade phenol, naphthalene, CA, DBF, and DBT in coking wastewater.
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Affiliation(s)
- Shengnan Shi
- School of Life Science, Liaoning Normal University, Dalian 116081, China
| | - Yuanyuan Qu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Qiao Ma
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - XuWang Zhang
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Jiti Zhou
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Fang Ma
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China.
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Genome Sequence of a Versatile Aromatic Hydrocarbon-Degrading Bacterium, Arthrobacter sp. W1. GENOME ANNOUNCEMENTS 2015; 3:3/2/e00387-15. [PMID: 25908151 PMCID: PMC4408352 DOI: 10.1128/genomea.00387-15] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Arthrobacter sp. W1 is a versatile aromatic-degrading strain which can directly or cometabolically degrade various organic pollutants, such as phenol, naphthalene, carbazole, dibenzofuran, and dibenzothiophene. Here, we present a 3.8-Mb draft genome sequence of strain W1, which may provide comprehensive genetic information for the application in environmental pollution remediation.
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Silva CD, Beristain-Montiel L, de Maria Cuervo-López F, Texier AC. p-Cresol mineralization and bacterial population dynamics in a nitrifying sequential batch reactor. J Environ Sci (China) 2014; 26:1885-1893. [PMID: 25193839 DOI: 10.1016/j.jes.2014.06.033] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2013] [Revised: 04/17/2014] [Accepted: 04/23/2014] [Indexed: 06/03/2023]
Abstract
The ability of a nitrifying sludge to oxidize p-cresol was evaluated in a sequential batch reactor (SBR). p-Cresol was first transformed to p-hydroxybenzaldehyde and p-hydroxybenzoate, which were later mineralized. The specific rates of p-cresol consumption increased throughout the cycles. The bacterial population dynamics were monitored by using denaturing gradient gel electrophoresis (DGGE) and sequencing of DGGE fragments. The ability of the sludge to consume p-cresol and intermediates might be related to the presence of species such as Variovorax paradoxus and Thauera mechernichensis. p-Cresol (25 to 200mgC/L) did not affect the nitrifying SBR performance (ammonium consumption efficiency and nitrate production yield were close to 100% and 1, respectively). This may be related to the high stability observed in the nitrifying communities. It was shown that a nitrifying SBR may be a good alternative to eliminate simultaneously ammonium and p-cresol, maintaining stable the respiratory process as the bacterial community.
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Affiliation(s)
- Carlos David Silva
- Department of Biotechnology - CBS, Universidad Autónoma Metropolitana - Iztapalapa, Mexico City 09340, Mexico; Department of Process and Technology-CNI, Universidad Autónoma Metropolitana - Cuajimalpa, Mexico City 05300, Mexico.
| | - Lizeth Beristain-Montiel
- Department of Biotechnology - CBS, Universidad Autónoma Metropolitana - Iztapalapa, Mexico City 09340, Mexico
| | - Flor de Maria Cuervo-López
- Department of Biotechnology - CBS, Universidad Autónoma Metropolitana - Iztapalapa, Mexico City 09340, Mexico
| | - Anne-Claire Texier
- Department of Biotechnology - CBS, Universidad Autónoma Metropolitana - Iztapalapa, Mexico City 09340, Mexico.
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Shi S, Qu Y, Ma F, Zhou J. Bioremediation of coking wastewater containing carbazole, dibenzofuran, dibenzothiophene and naphthalene by a naphthalene-cultivated Arthrobacter sp. W1. BIORESOURCE TECHNOLOGY 2014; 164:28-33. [PMID: 24835915 DOI: 10.1016/j.biortech.2014.04.010] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2014] [Revised: 04/03/2014] [Accepted: 04/04/2014] [Indexed: 06/03/2023]
Abstract
A naphthalene-utilizing bacterium, Arthrobacter sp. W1, was used to investigate the cometabolic degradation of carbazole (CA), dibenzofuran (DBF) and dibenzothiophene (DBT) using naphthalene as the primary substrate. Both the growing and washed cells of strain W1 could degrade CA, DBF, DBT, and naphthalene simultaneously and quickly. Inhibition kinetics confirmed that the presence of CA, DBF and DBT in the growing system would inhibit the cells growth and biodegradability of strain W1. The relationship between ln(C/C0) and time, and specific degradation rate and CA, DBF and DBT concentration could be described well by First-order and Michaelis-Menten kinetics. The treatment of real coking wastewater containing high concentration of phenol, naphthalene, CA, DBF, DBT and NH3-N was shown to be highly efficient by naphthalene-grown W1 coupling with activation zeolite. Toxicity assessment indicated the treatment of the coking wastewater by strain W1 coupling with activation led to less toxicity than untreated wastewater.
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Affiliation(s)
- Shengnan Shi
- State Key Laboratory of Urban Water Resource and Environment, School of Municipal and Environmental Engineering, Harbin Institute of Technology, Harbin 150090, China
| | - Yuanyuan Qu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Fang Ma
- State Key Laboratory of Urban Water Resource and Environment, School of Municipal and Environmental Engineering, Harbin Institute of Technology, Harbin 150090, China.
| | - Jiti Zhou
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
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14
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Castillo-Carvajal LC, Sanz-Martín JL, Barragán-Huerta BE. Biodegradation of organic pollutants in saline wastewater by halophilic microorganisms: a review. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2014; 21:9578-9588. [PMID: 24859702 DOI: 10.1007/s11356-014-3036-z] [Citation(s) in RCA: 77] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2014] [Accepted: 05/12/2014] [Indexed: 06/03/2023]
Abstract
Agro-food, petroleum, textile, and leather industries generate saline wastewater with a high content of organic pollutants such as aromatic hydrocarbons, phenols, nitroaromatics, and azo dyes. Halophilic microorganisms are of increasing interest in industrial waste treatment, due to their ability to degrade hazardous substances efficiently under high salt conditions. However, their full potential remains unexplored. The isolation and identification of halophilic and halotolerant microorganisms from geographically unrelated and geologically diverse hypersaline sites supports their application in bioremediation processes. Past investigations in this field have mainly focused on the elimination of polycyclic aromatic hydrocarbons and phenols, whereas few studies have investigated N-aromatic compounds, such as nitro-substituted compounds, amines, and azo dyes, in saline wastewater. Information regarding the growth conditions and degradation mechanisms of halophilic microorganisms is also limited. In this review, we discuss recent research on the removal of organic pollutants such as organic matter, in terms of chemical oxygen demand (COD), dyes, hydrocarbons, N-aliphatic and N-aromatic compounds, and phenols, in conditions of high salinity. In addition, some proposal pathways for the degradation of aromatic compounds are presented.
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Affiliation(s)
- Laura C Castillo-Carvajal
- Departamento de Ingeniería en Sistemas Ambientales, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Av. Wilfrido Massieu, Unidad Profesional Adolfo López Mateos, D.F, 07738, Mexico
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De Paolis MR, Lippi D, Guerriero E, Polcaro CM, Donati E. Biodegradation of α-, β-, and γ-hexachlorocyclohexane by Arthrobacter fluorescens and Arthrobacter giacomelloi. Appl Biochem Biotechnol 2013; 170:514-24. [PMID: 23553101 DOI: 10.1007/s12010-013-0147-9] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2012] [Accepted: 02/18/2013] [Indexed: 11/30/2022]
Abstract
The organochlorine pesticide γ-hexachlorocyclohexane (γ-HCH, lindane) and its non-insecticidal isomers α-, β-, and δ- continue to pose serious environmental and health concerns, although their use has been restricted or completely banned for decades. The present study reports the first results on the ability of two Arthrobacter strains, not directly isolated from a HCH-polluted site, to grow in a mineral salt medium containing α-, β-, or γ-HCH (100 mgl(-1)) as sole source of carbon. Growth of cultures and HCHs degradation by Arthrobacter fluorescens and Arthrobacter giacomelloi were investigated after 1, 2, 3, 4, and 7 days of incubation by enumerating colony forming units and GC with ECD detection, respectively. Both bacteria are able to metabolize the HCHs: A. giacomelloi is the most effective one, as after 72 h of incubation it produces 88 % degradation of α-, 60 % of β-, and 56 % of γ-HCH. The formation of possible persistent compounds was studied by GC/MS and by HPLC analysis. Pentachlorocyclohexenes and tetrachlorocyclohexenes have been detected as metabolites, which are almost completely eliminated after 72 h of incubation, while no phenolic compounds were found.
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Affiliation(s)
- M R De Paolis
- Institute of Agro-environmental and Forest Biology, Research Area of Rome 1, National Research Council, Via Salaria Km. 29,300, 00015 Monterotondo (Roma), Italy
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Bonfá MRL, Grossman MJ, Piubeli F, Mellado E, Durrant LR. Phenol degradation by halophilic bacteria isolated from hypersaline environments. Biodegradation 2013; 24:699-709. [PMID: 23292008 DOI: 10.1007/s10532-012-9617-y] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2012] [Accepted: 12/24/2012] [Indexed: 11/24/2022]
Abstract
Phenol is a toxic aromatic compound used or produced in many industries and as a result a common component of industrial wastewaters. Phenol containing waste streams are frequently hypersaline and therefore require halophilic microorganisms for efficient biotreatment without dilution. In this study three halophilic bacteria isolated from different saline environments and identified as Halomonas organivorans, Arhodomonas aquaeolei and Modicisalibacter tunisiensis were shown to be able to grow on phenol in hypersaline media containing 100 g/L of total salts at a concentration of 3 mM (280 mg/L), well above the concentration found in most waste streams. Genes encoding the aromatic dioxygenase enzymes catechol 1,2 dioxygenase and protocatechuate 3,4-dioxygenase were present in all strains as determined by PCR amplification using primers specific for highly conserved regions of the genes. The gene for protocatechuate 3,4-dioxygenase was cloned from the isolated H. organivorans and the translated protein was evaluated by comparative protein sequence analysis with protocatechuate 3,4-dioxygenase proteins from other microorganisms. Although the analysis revealed a wide range of sequence divergence among the protocatechuate 3,4-dioxygenase family, all of the conserved domain amino acid structures identified for this enzyme family are identical or conservatively substituted in the H. organivorans enzyme.
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Affiliation(s)
- Maricy Raquel Lindenbah Bonfá
- Departamento de Ciência de Alimentos-FEA, Universidade Estadual de Campinas-UNICAMP, Rua Monteiro Lobato, 80 CEP, Campinas, SP 13083-862, Brazil
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Qu Y, Shi S, Zhou H, Ma Q, Li X, Zhang X, Zhou J. Characterization of a novel phenol hydroxylase in indoles biotransformation from a strain Arthrobacter sp. W1 [corrected]. PLoS One 2012; 7:e44313. [PMID: 23028517 PMCID: PMC3441600 DOI: 10.1371/journal.pone.0044313] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2012] [Accepted: 08/01/2012] [Indexed: 11/30/2022] Open
Abstract
Background Indigoids, as popular dyes, can be produced by microbial strains or enzymes catalysis. However, the new valuable products with their transformation mechanisms, especially inter-conversion among the intermediates and products have not been clearly identified yet. Therefore, it is necessary to investigate novel microbial catalytic processes for indigoids production systematically. Findings A phenol hydroxylase gene cluster (4,606 bp) from Arthrobacter sp. W1 (PHw1) was obtained. This cluster contains six components in the order of KLMNOP, which exhibit relatively low sequence identities (37–72%) with known genes. It was suggested that indole and all the tested indole derivatives except for 3-methylindole were transformed to various substituted indigoid pigments, and the predominant color products derived from indoles were identified by spectrum analysis. One new purple product from indole, 2-(7-oxo-1H-indol-6(7H)-ylidene) indolin-3-one, should be proposed as the dimerization of isatin and 7-hydroxylindole at the C-2 and C-6 positions. Tunnel entrance and docking studies were used to predict the important amino acids for indoles biotransformation, which were further proved by site-directed mutagenesis. Conclusions/Significance We showed that the phenol hydroxylase from genus Arthrobacter could transform indoles to indigoids with new chemical compounds being produced. Our work should show high insights into understanding the mechanism of indigoids bio-production.
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Affiliation(s)
- Yuanyuan Qu
- Key Laboratory of Industrial Ecology and Environmental Engineering (Ministry of Education), School of Environmental Science and Technology, Dalian University of Technology, Dalian, China.
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Penicillium chrysogenum var. halophenolicum, a new halotolerant strain with potential in the remediation of aromatic compounds in high salt environments. Microbiol Res 2012; 167:79-89. [PMID: 21524896 DOI: 10.1016/j.micres.2011.03.004] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2010] [Revised: 03/12/2011] [Accepted: 03/26/2011] [Indexed: 11/24/2022]
Abstract
A halotolerant phenylacetate-degrading fungus Penicillium CLONA2, previously isolated from a salt mine at Algarve (Portugal), was identified as a variant of P. chrysogenum using the ITS-5,8S rDNA and the D1/D2 domain of 28S rDNA sequences. The metabolic features and genetic characteristics suggest that this strain belongs to a subgroup of P. chrysogenum, named var. halophenolicum. The presence of the penicillin biosynthetic cluster was proven by Southern hybridizations using probes internal to the pcbAB and penDE genes and sequencing of the pcbAB-pcbC intergenic region. However the pcbAB-pcbC divergent promoter region contained 20 point modifications with respect to that of the wild type P. chrysogenum NRRL1951. The CLONA2 strain produced non-aromatic natural penicillins rather than benzylpenicillin in a medium containing potassium phenylacetate (the precursor of benzylpenicillin) and was able to grow well on phenylacetatic acid using it as sole carbon source. Due to the ability of P. chrysogenum CLONA2 to degrade aromatic compounds, this strain may be an interesting organism for aromatic compounds remediation in high salinity environments.
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Degradation of cresols by phenol-acclimated aerobic granules. Appl Microbiol Biotechnol 2010; 89:209-15. [DOI: 10.1007/s00253-010-2878-7] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2010] [Revised: 08/30/2010] [Accepted: 08/31/2010] [Indexed: 10/19/2022]
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Masciandaro G, Macci C, Doni S, Ceccanti B. Use of earthworms (Eisenia fetida) to reduce phytotoxicity and promote humification of pre-composted olive oil mill wastewater. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2010; 90:1879-1885. [PMID: 20602513 DOI: 10.1002/jsfa.4028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
BACKGROUND Olive mill wastewaters (OMWW) contain a high recalcitrant organic load and an associated toxicity that make their treatment necessary before environmental application. The aim of this study was to evaluate the feasibility of promoting the valorization and reducing the phytotoxicity of OMWW through a pre-composting process together with straw-chip bulking materials followed by the application of earthworms (Eisenia fetida) in the presence of oat seedlings (Avena sativa L.) seedlings. RESULTS After 3 months, the pre-composted material showed properties similar to a partially digested compost with some significant amelioration of chemical-physical and biochemical properties. The application of earthworms permitted a significant decrease in chemical (total organic carbon, water-extractable organic carbon, total nitrogen) and biological parameters (dehydrogenase enzyme activity), and an increase in humic substances and available nitrogen forms. In the presence of plants a higher C/N ratio and a lower content of nitrates were observed. In addition, the reduction in phenolic compounds observed in treatments with earthworms caused a decrease in phytotoxicity by about 50% with respect to the pre-composted material, which results in an increase in germination index. CONCLUSION The utilization of earthworms, in particular in the presence of plants, may be an ecologically sound and economically feasible technology to obtain a non-toxic, high-value product useful for agricultural purposes.
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Affiliation(s)
- Grazia Masciandaro
- Institute of Ecosystem Study-National Research Council (CNR), 56124 Pisa, Italy
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