Assessing the effectiveness of attractants to increase camera trap detections of North American mammals

Comparing the effectiveness of environmental DNA and camera traps for surveying American mink (Neogale vison) in northeastern Indiana

While camera traps can effectively detect semi-aquatic mammal species, they are also often temporally and monetarily inefficient and have a difficult time detecting smaller bodied, elusive mammals. Recent studies have shown that extracting DNA from environmental samples can be a non-invasive, alternative method of detecting elusive species. Environmental DNA (eDNA) has not yet been used to survey American mink (Neogale vison), a cryptic and understudied North American mustelid. To help determine best survey practices for the species, we compared the effectiveness and efficiency of eDNA and camera traps in surveys for American mink. We used both methods to monitor the shoreline of seven bodies of water in northeastern Indiana from March to May 2021. We extracted DNA from filtered environmental water samples and used quantitative real-time PCR to determine the presence of mink at each site. We used Akaike's Information Criterion to rank probability of detection models with and without survey method as a covariate. We detected mink at four of the seven sites and seven of the 21 total survey weeks using camera traps (probability of detection (ρ) = 0.36). We detected mink at five sites and during five survey weeks using eDNA (ρ = 0.25). However, the highest probability of detection was obtained when both methods were combined, and data were pooled (ρ = 0.47). Survey method did not influence model fit, suggesting no difference in detectability between camera traps and eDNA. Environmental DNA was twice as expensive, but only required a little over half (58%) of the time when compared to camera trapping. We recommend ways in which an improved eDNA methodology may be more cost effective for future studies. For this study, a combination of both methods yielded the highest probability for detecting mink presence.

Ecological function maintained despite mesomammal declines

Mid-sized mammals (i.e., mesomammals) fulfill important ecological roles, serving as essential scavengers, predators, pollinators, and seed dispersers in the ecosystems they inhabit. Consequently, declines in mesomammal populations have the potential to alter ecological processes and fundamentally change ecosystems. However, ecosystems characterized by high functional redundancy, where multiple species can fulfil similar ecological roles, may be less impacted by the loss of mesomammals and other vertebrates. The Greater Everglades Ecosystem in southern Florida is a historically biodiverse region that has recently been impacted by multiple anthropogenic threats, most notably the introduction of the Burmese python (Python molurus bivittatus). Since pythons became established, mesomammal populations have become greatly reduced. To assess whether these declines in mesomammals have affected two critical ecosystem functions-scavenging and frugivory-we conducted experiments in areas where mesomammals were present and absent. We did not observe significant differences in scavenging or frugivory efficiency in areas with and without mesomammals, but we did observe significant differences in the communities responsible for scavenging and frugivory. Despite the observed evidence of redundancy, the changes in community composition could potentially lead to indirect consequences on processes like seed dispersal and disease dynamics within this ecosystem, emphasizing the need for further study.

Urbanization does not affect red foxes' interest in anthropogenic food, but increases their initial cautiousness

Human presence and activities have profoundly altered animals' habitats, exposing them to greater risks but also providing new opportunities and resources. The animals' capacity to effectively navigate and strike a balance between risks and benefits is crucial for their survival in the Anthropocene era. Red foxes (Vulpes vulpes), adept urban dwellers, exhibit behavioral plasticity in human-altered environments. We investigated variations in detection frequency on trail cameras and the behavioral responses (explorative, bold, and fearful) of wild red foxes living along an urbanization gradient when exposed to a metal bin initially presented clean and then filled with anthropogenic food. All fox populations displayed an increased interest and similar explorative behavioral responses toward the anthropogenic food source, irrespective of the urbanization gradient. Despite no impact on explorative behaviors, foxes in more urbanized areas initially showed heightened fear toward the empty bin, indicating increased apprehension toward novel objects. However, this fear diminished over time, and in the presence of food, urban foxes displayed slightly reduced fear compared with their less urban counterparts. Our results highlight foxes' potential for adaptability to human landscapes, additionally underscoring the nuanced interplay of fear and explorative behavioral response of populations living along the urbanization gradient.

Forest disturbance and occupancy patterns of American ermine (Mustela richardsonii) and long-tailed weasel (Neogale frenata): results from a large-scale natural experiment in Maine, United States

Weasels are small mustelid carnivores that play an important role as predators of small mammals in a wide array of ecosystems. However, their response to land use, such as forest harvest for timber products, is seldom the subject of focused research and management projects. Both the American ermine, also known as the short-tailed weasel (Mustela richardsonii), and the long-tailed weasel (Neogale frenata) are native to Maine, United States, where commercial timber harvesting is widespread. The effects of this forest disturbance on weasels are poorly understood, so to contribute toward filling this knowledge gap, we conducted a 4-year, large-scale field study: specifically, our objective was to assess the effects of forest disturbance caused by timber harvest on occupancy patterns of ermines and long-tailed weasels occupancy patterns in Maine. We collected data from 197 survey sites (three camera traps each) over 4 years and analyzed over 7,000 images of weasels using dynamic false-positive occupancy models. We found that American ermines were widely distributed across the state (naïve occupancy at 54% of sites), while long-tailed weasels were rarer (naïve occupancy at 16% of sites). Both species responded positively to forest disturbance, with higher occupancy probabilities as disturbance increased, especially at the larger scales. American ermines were more likely to occupy stands with a higher percentage of conifer trees, while no such relationship was found for long-tailed weasels. We conclude that current forest harvest practices in Maine are not detrimental to weasel populations, but that the two species warrant continued monitoring.

Spatial–Temporal Patterns of Sympatric Asiatic Black Bears (Ursus thibetanus) and Brown Bears (Ursus arctos) in Northeastern China

Studying the spatial and temporal interactions between sympatric animal species is essential for understanding the mechanisms of interspecific coexistence. Both Asiatic black bears (Ursus thibetanus) and brown bears (Ursus arctos) inhabit northeastern China, but their spatial–temporal patterns and the mechanism of coexistence were unclear until now. Camera traps were set in Heilongjiang Taipinggou National Nature Reserve (TPGNR) from January 2017 to December 2017 to collect photos of the two sympatric bear species. The Pianka index, kernel density estimation, and the coefficient of overlap were used to analyze the spatial and temporal patterns of the two sympatric species. Our findings indicated that the spatial overlap between Asiatic black bears and brown bears was low, as Asiatic black bears occupied higher elevations than brown bears. The two species’ temporal activity patterns were similar at sites where only one species existed, yet they were different at the co–occurrence sites. Asiatic black bears and brown bears are competitors in this area, but they can coexist by changing their daily activity patterns. Compared to brown bears, Asiatic black bears behaved more diurnally. Our study revealed distinct spatial and temporal differentiation within the two species in TPGNR, which can reduce interspecific competition and facilitate coexistence between them.

Umbrella effect of monitoring protocols for mammals in the Northeast US

Developing cost-effective monitoring protocols is a priority for wildlife conservation agencies worldwide. In particular, developing protocols that cover a wide range of species is highly desirable. Here we applied the 'umbrella species' concept to the context of ecological monitoring; specifically testing the hypothesis that protocols developed for the American marten would contextually allow detecting occupancy trends for 13 other mammalian species (i.e., an umbrella effect). We conducted a large-scale four-year camera trapping survey across a gradient of forest disturbance in Maine, USA. We sampled 197 sites using a total of 591 cameras and collected over 800,000 photographs to generate detection histories for the most common terrestrial species. By combining multi-season occupancy modelling and power analyses, we estimated the required sampling effort to detect 10%, 25% and 50% declines in the fourteen species. By conducting a spatially explicit comparison of sampling effort, we found evidence that monitoring protocols for American marten would provide an umbrella effect for up to 11 other mammal species. The capacity of the umbrella effect varied among species, with fisher, snowshoe hare, red squirrel, and black bear consistently covered under several scenarios. Our results support the application of the umbrella species concept to monitoring (here defined as 'umbrella monitoring species'), providing empirical evidence for its use by management agencies.

Empirical evaluation of the spatial scale and detection process of camera trap surveys

BACKGROUND

Camera traps present a valuable tool for monitoring animals but detect species imperfectly. Occupancy models are frequently used to address this, but it is unclear what spatial scale the data represent. Although individual cameras monitor animal activity within a small target window in front of the device, many practitioners use these data to infer animal presence over larger, vaguely-defined areas. Animal movement is generally presumed to link these scales, but fine-scale heterogeneity in animal space use could disrupt this relationship.

METHODS

We deployed cameras at 10 m intervals across a 0.6 ha forest plot to create an unprecedentedly dense sensor array that allows us to compare animal detections at these two scales. Using time-stamped camera detections we reconstructed fine-scale movement paths of four mammal species and characterized (a) how well animal use of a single camera represented use of the surrounding plot, (b) how well cameras detected animals, and (c) how these processes affected overall detection probability, p. We used these observations to parameterize simulations that test the performance of occupancy models in realistic scenarios.

RESULTS

We document two important aspects of animal movement and how it affects sampling with passive detectors. First, animal space use is heterogeneous at the camera-trap scale, and data from a single camera may poorly represent activity in its surroundings. Second, cameras frequently (14-71%) fail to record passing animals. Our simulations show how this heterogeneity can introduce unmodeled variation into detection probability, biasing occupancy estimates for species with low p.

CONCLUSIONS

Occupancy or population estimates with camera traps could be improved by increasing camera reliability to reduce missed detections, adding covariates to model heterogeneity in p, or increasing the area sampled by each camera through different sampling designs or technologies.

Modelos de ocupación para datos de cámaras trampa

El uso de las cámaras trampa (CT) en la investigación de fauna silvestre puede generar conclusiones sesgadas cuando la detectabilidad imperfecta de especies no es considerada. Herramientas analíticas como los modelos de ocupación permiten estimar simultáneamente parámetros ecológicos corregidos por la probabilidad de detección. Sin embargo, es necesario implementar e interpretar de manera correcta los parámetros estimados por estos modelos para obtener inferencias con sentido biológico. Este trabajo presenta un marco conceptual base para diseñar de manera apropiada un análisis de ocupación por medio de datos de CT. Se discuten y se señalan recomendaciones generales para la definición de los elementos del modelo, el diseño del muestreo, así como estrategias de modelamiento estadísticos apropiadas dependiendo de los objetivos del estudio, las características de la especie y el tipo de datos obtenidos. Las decisiones tomadas por el investigador para definir cada uno de los componentes del modelo deben considerar la escala adecuada para que el fenómeno de estudio tenga sentido biológico. De esta manera, es posible generar inferencias y conclusiones robustas a partir de información de CT, lo que permite avanzar en el entendimiento de los mecanismos que subyacen a la ecología espacial de fauna silvestre y por lo tanto en su conservación.