1
|
Leonardo C, Yang SJ, Orcutt K, Iwai M, Arsenault EA, Fleming GR. Bidirectional Energy Flow in the Photosystem II Supercomplex. J Phys Chem B 2024; 128:7941-7953. [PMID: 39140159 PMCID: PMC11345834 DOI: 10.1021/acs.jpcb.4c02508] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2024] [Revised: 07/10/2024] [Accepted: 08/05/2024] [Indexed: 08/15/2024]
Abstract
The water-splitting capability of Photosystem II (PSII) of plants and green algae requires the system to balance efficient light harvesting along with effective photoprotection against excitation in excess of the photosynthetic capacity, particularly under the naturally fluctuating sunlight intensity. The comparatively flat energy landscape of the multicomponent structure, inferred from the spectra of the individual pigment-protein complexes and the rather narrow and featureless absorption spectrum, is well known. However, how the combination of the required functions emerges from the interactions among the multiple components of the PSII supercomplex (PSII-SC) cannot be inferred from the individual pigment-protein complexes. In this work, we investigate the energy transfer dynamics of the C2S2-type PSII-SC with a combined spectroscopic and modeling approach. Specifically, two-dimensional electronic-vibrational (2DEV) spectroscopy provides enhanced spectral resolution and the ability to map energy evolution in real space, while the quantum dynamical simulation allows complete kinetic modeling of the 210 chromophores. We demonstrate that additional pathways emerge within the supercomplex. In particular, we show that excitation energy can leave the vicinity of the charge separation components, the reaction center (RC), faster than it can transfer to it. This enables activatable quenching centers in the periphery of the PSII-SC to be effective in removing excessive energy in cases of overexcitation. Overall, we provide a quantitative description of how the seemingly contradictory functions of PSII-SC arise from the combination of its individual components. This provides a fundamental understanding that will allow further improvement of artificial solar energy devices and bioengineering processes for increasing crop yield.
Collapse
Affiliation(s)
- Cristina Leonardo
- Department
of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular
Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Shiun-Jr Yang
- Molecular
Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Department
of Chemistry, University of California,
Berkeley, Berekeley, California 94720, United States
- Kavli
Energy Nanoscience Institute at Berkeley, Berkeley, California 94720, United States
| | - Kaydren Orcutt
- Molecular
Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Department
of Chemistry, University of California,
Berkeley, Berekeley, California 94720, United States
| | - Masakazu Iwai
- Molecular
Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Department
of Plant and Microbial Biology, University
of California, Berkeley, Berekeley, California 94720, United States
| | - Eric A. Arsenault
- Molecular
Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Department
of Chemistry, University of California,
Berkeley, Berekeley, California 94720, United States
- Kavli
Energy Nanoscience Institute at Berkeley, Berkeley, California 94720, United States
| | - Graham R. Fleming
- Molecular
Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Department
of Chemistry, University of California,
Berkeley, Berekeley, California 94720, United States
- Kavli
Energy Nanoscience Institute at Berkeley, Berkeley, California 94720, United States
| |
Collapse
|
2
|
Nguyen HH, Song Y, Maret EL, Silori Y, Willow R, Yocum CF, Ogilvie JP. Charge separation in the photosystem II reaction center resolved by multispectral two-dimensional electronic spectroscopy. SCIENCE ADVANCES 2023; 9:eade7190. [PMID: 37134172 PMCID: PMC10156117 DOI: 10.1126/sciadv.ade7190] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The photosystem II reaction center (PSII RC) performs the primary energy conversion steps of oxygenic photosynthesis. While the PSII RC has been studied extensively, the similar time scales of energy transfer and charge separation and the severely overlapping pigment transitions in the Qy region have led to multiple models of its charge separation mechanism and excitonic structure. Here, we combine two-dimensional electronic spectroscopy (2DES) with a continuum probe and two-dimensional electronic vibrational spectroscopy (2DEV) to study the cyt b559-D1D2 PSII RC at 77 K. This multispectral combination correlates the overlapping Qy excitons with distinct anion and pigment-specific Qx and mid-infrared transitions to resolve the charge separation mechanism and excitonic structure. Through extensive simultaneous analysis of the multispectral 2D data, we find that charge separation proceeds on multiple time scales from a delocalized excited state via a single pathway in which PheoD1 is the primary electron acceptor, while ChlD1 and PD1 act in concert as the primary electron donor.
Collapse
Affiliation(s)
- Hoang H Nguyen
- Department of Physics and Biophysics, University of Michigan, 450 Church St., Ann Arbor, MI 48109, USA
| | - Yin Song
- Department of Physics and Biophysics, University of Michigan, 450 Church St., Ann Arbor, MI 48109, USA
- School of Optics and Photonics, Beijing Institute of Technology, 5 Zhongguancun South Street, Haidian District, Beijing, 100081, China
| | - Elizabeth L Maret
- Department of Physics and Biophysics, University of Michigan, 450 Church St., Ann Arbor, MI 48109, USA
| | - Yogita Silori
- Department of Physics and Biophysics, University of Michigan, 450 Church St., Ann Arbor, MI 48109, USA
| | - Rhiannon Willow
- Department of Physics and Biophysics, University of Michigan, 450 Church St., Ann Arbor, MI 48109, USA
| | - Charles F Yocum
- Department of Molecular, Cellular and Developmental Biology and Department of Chemistry, University of Michigan, 450 Church St, Ann Arbor, MI 48109, USA
| | - Jennifer P Ogilvie
- Department of Physics and Biophysics, University of Michigan, 450 Church St., Ann Arbor, MI 48109, USA
| |
Collapse
|
3
|
Hayase T, Shimada Y, Mitomi T, Nagao R, Noguchi T. Triplet Delocalization over the Reaction Center Chlorophylls in Photosystem II. J Phys Chem B 2023; 127:1758-1770. [PMID: 36809007 DOI: 10.1021/acs.jpcb.3c00139] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/23/2023]
Abstract
The triplet state of chlorophyll formed by charge recombination in photosystem II (PSII) is a precursor of harmful singlet oxygen. Although main localization of the triplet state on the monomeric chlorophyll, ChlD1, at cryogenic temperatures has been suggested, how the triplet state is delocalized on other chlorophylls remains unclear. Here, we investigated the distribution of the triplet state of chlorophyll in PSII using light-induced Fourier transform infrared (FTIR) difference spectroscopy. Measurements of triplet-minus-singlet FTIR difference spectra with PSII core complexes from cyanobacterial mutants, D1-V157H, D2-V156H, D2-H197A, and D1-H198A, in which the interactions of the 131-keto C═O groups of the reaction center chlorophylls, PD1, PD2, ChlD1, and ChlD2, respectively, were perturbed, identified the 131-keto C═O bands of the individual chlorophylls and showed that the triplet state is delocalized over all of these chlorophylls. It is suggested that the triplet delocalization plays important roles in the photoprotection and photodamage mechanisms in PSII.
Collapse
Affiliation(s)
- Taichi Hayase
- Department of Physics, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan
| | - Yuichiro Shimada
- Department of Physics, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan
| | - Tatsuya Mitomi
- Department of Physics, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan
| | - Ryo Nagao
- Department of Physics, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan.,Faculty of Agriculture, Shizuoka University, Shizuoka 422-8529, Japan
| | - Takumi Noguchi
- Department of Physics, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan
| |
Collapse
|
4
|
From antenna to reaction center: Pathways of ultrafast energy and charge transfer in photosystem II. Proc Natl Acad Sci U S A 2022; 119:e2208033119. [PMID: 36215463 PMCID: PMC9586314 DOI: 10.1073/pnas.2208033119] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
The photosystem II core complex (PSII-CC) is a photosynthetic complex that contains antenna proteins, which collect energy from sunlight, and a reaction center, which converts the collected energy to redox potential. Understanding the interplay between the antenna proteins and the reaction center will facilitate the development of more efficient solar energy conversion technologies. Here, we study the sub-100-ps dynamics of PSII-CC with two-dimensional electronic-vibrational spectroscopy, which connects energy flows with physical space, allowing a direct mapping of energy transfer pathways. Our results reveal a complex dynamical scheme which includes a specific pathway that connects CP43 to the reaction center. Resolving this pathway experimentally provides insights into the energy conversion processes in natural photosynthesis. The photosystem II core complex (PSII-CC) is the smallest subunit of the oxygenic photosynthetic apparatus that contains core antennas and a reaction center, which together allow for rapid energy transfer and charge separation, ultimately leading to efficient solar energy conversion. However, there is a lack of consensus on the interplay between the energy transfer and charge separation dynamics of the core complex. Here, we report the application of two-dimensional electronic-vibrational (2DEV) spectroscopy to the spinach PSII-CC at 77 K. The simultaneous temporal and spectral resolution afforded by 2DEV spectroscopy facilitates the separation and direct assignment of coexisting dynamical processes. Our results show that the dominant dynamics of the PSII-CC are distinct in different excitation energy regions. By separating the excitation regions, we are able to distinguish the intraprotein dynamics and interprotein energy transfer. Additionally, with the improved resolution, we are able to identify the key pigments involved in the pathways, allowing for a direct connection between dynamical and structural information. Specifically, we show that C505 in CP43 and the peripheral chlorophyll ChlzD1 in the reaction center are most likely responsible for energy transfer from CP43 to the reaction center.
Collapse
|
5
|
Yoneda Y, Arsenault EA, Yang SJ, Orcutt K, Iwai M, Fleming GR. The initial charge separation step in oxygenic photosynthesis. Nat Commun 2022; 13:2275. [PMID: 35477708 PMCID: PMC9046298 DOI: 10.1038/s41467-022-29983-1] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Accepted: 04/11/2022] [Indexed: 11/09/2022] Open
Abstract
Photosystem II is crucial for life on Earth as it provides oxygen as a result of photoinduced electron transfer and water splitting reactions. The excited state dynamics of the photosystem II-reaction center (PSII-RC) has been a matter of vivid debate because the absorption spectra of the embedded chromophores significantly overlap and hence it is extremely difficult to distinguish transients. Here, we report the two-dimensional electronic-vibrational spectroscopic study of the PSII-RC. The simultaneous resolution along both the visible excitation and infrared detection axis is crucial in allowing for the character of the excitonic states and interplay between them to be clearly distinguished. In particular, this work demonstrates that the mixed exciton-charge transfer state, previously proposed to be responsible for the far-red light operation of photosynthesis, is characterized by the ChlD1+Phe radical pair and can be directly prepared upon photoexcitation. Further, we find that the initial electron acceptor in the PSII-RC is Phe, rather than PD1, regardless of excitation wavelength.
Collapse
Affiliation(s)
- Yusuke Yoneda
- Department of Chemistry, University of California, Berkeley, CA, 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States
- Research Center of Integrative Molecular Systems, Institute for Molecular Science, National Institute of Natural Sciences, Okazaki, Aichi, 444-8585, Japan
| | - Eric A Arsenault
- Department of Chemistry, University of California, Berkeley, CA, 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States
- Kavli Energy Nanoscience Institute at Berkeley, Berkeley, CA, 94720, United States
| | - Shiun-Jr Yang
- Department of Chemistry, University of California, Berkeley, CA, 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States
| | - Kaydren Orcutt
- Department of Chemistry, University of California, Berkeley, CA, 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States
| | - Masakazu Iwai
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States
- Department of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, United States
| | - Graham R Fleming
- Department of Chemistry, University of California, Berkeley, CA, 94720, United States.
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, United States.
- Kavli Energy Nanoscience Institute at Berkeley, Berkeley, CA, 94720, United States.
| |
Collapse
|
6
|
Zabelin AA, Neverov KV, Krasnovsky AA, Shkuropatova VA, Shuvalov VA, Shkuropatov AY. Characterization of the low-temperature triplet state of chlorophyll in photosystem II core complexes: Application of phosphorescence measurements and Fourier transform infrared spectroscopy. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2016; 1857:782-8. [PMID: 27040752 DOI: 10.1016/j.bbabio.2016.03.029] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2016] [Revised: 03/23/2016] [Accepted: 03/28/2016] [Indexed: 10/21/2022]
Abstract
Phosphorescence measurements at 77 K and light-induced FTIR difference spectroscopy at 95 K were applied to study of the triplet state of chlorophyll a ((3)Chl) in photosystem II (PSII) core complexes isolated from spinach. Using both methods, (3)Chl was observed in the core preparations with doubly reduced primary quinone acceptor QA. The spectral parameters of Chl phosphorescence resemble those in the isolated PSII reaction centers (RCs). The main spectral maximum and the lifetime of the phosphorescence corresponded to 955±1 nm and of 1.65±0.05 ms respectively; in the excitation spectrum, the absorption maxima of all core complex pigments (Chl, pheophytin a (Pheo), and β-carotene) were observed. The differential signal at 1667(-)/1628(+)cm(-1) reflecting a downshift of the stretching frequency of the 13(1)-keto C=O group of Chl was found to dominate in the triplet-minus-singlet FTIR difference spectrum of core complexes. Based on FTIR results and literature data, it is proposed that (3)Chl is mostly localized on the accessory chlorophyll that is in triplet equilibrium with P680. Analysis of the data suggests that the Chl triplet state responsible for the phosphorescence and the FTIR difference spectrum is mainly generated due to charge recombination in the reaction center radical pair P680(+)PheoD1(-), and the energy and temporal parameters of this triplet state as well as the molecular environment and interactions of the triplet-bearing Chl molecule are similar in the PSII core complexes and isolated PSII RCs.
Collapse
Affiliation(s)
- Alexey A Zabelin
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russian Federation
| | - Konstantin V Neverov
- A.N. Bach Institute of Biochemistry, Russian Academy of Sciences, Leninskii pr., 33, Moscow 119071, Russian Federation; Biology Department, M.V. Lomonosov Moscow State University, Vorobyovy Gory, Moscow 119992, Russian Federation
| | - Alexander A Krasnovsky
- A.N. Bach Institute of Biochemistry, Russian Academy of Sciences, Leninskii pr., 33, Moscow 119071, Russian Federation; Biology Department, M.V. Lomonosov Moscow State University, Vorobyovy Gory, Moscow 119992, Russian Federation
| | - Valentina A Shkuropatova
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russian Federation
| | - Vladimir A Shuvalov
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russian Federation
| | - Anatoly Ya Shkuropatov
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russian Federation.
| |
Collapse
|
7
|
Sano Y, Endo K, Tomo T, Noguchi T. Modified molecular interactions of the pheophytin and plastoquinone electron acceptors in photosystem II of chlorophyll D-containing Acaryochloris marina as revealed by FTIR spectroscopy. PHOTOSYNTHESIS RESEARCH 2015; 125:105-114. [PMID: 25560630 DOI: 10.1007/s11120-014-0073-x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2014] [Accepted: 12/20/2014] [Indexed: 06/04/2023]
Abstract
Acaryochloris marina is a unique cyanobacterium that contains chlorophyll (Chl) d as a major pigment. Because Chl d has smaller excitation energy than Chl a used in ordinary photosynthetic organisms, the energetics of the photosystems of A. marina have been the subject of interest. It was previously shown that the redox potentials (E m's) of the redox-active pheophytin a (Pheo) and the primary plastoquinone electron acceptor (QA) in photosystem II (PSII) of A. marina are higher than those in Chl a-containing PSII, to compensate for the smaller excitation energy of Chl d (Allakhverdiev et al., Proc Natl Acad Sci USA 107: 3924-3929, 2010; ibid. 108: 8054-8058, 2011). To clarify the mechanisms of these E m increases, in this study, we have investigated the molecular interactions of Pheo and QA in PSII core complexes from A. marina using Fourier transform infrared (FTIR) spectroscopy. Light-induced FTIR difference spectra upon single reduction of Pheo and QA showed that spectral features in the regions of the keto and ester C=O stretches and the chlorin ring vibrations of Pheo and in the CO/CC stretching region of the Q A (-) semiquinone anion in A. marina are significantly different from those of the corresponding spectra in Chl a-containing cyanobacteria. These observations indicate that the molecular interactions, including the hydrogen bond interactions at the C=O groups, of these cofactors are modified in their binding sites of PSII proteins. From these results, along with the sequence information of the D1 and D2 proteins, it is suggested that A. marina tunes the E m's of Pheo and QA by altering nearby hydrogen bond networks to modify the structures of the binding pockets of these cofactors.
Collapse
Affiliation(s)
- Yuko Sano
- Division of Material Science, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, 464-8602, Japan
| | | | | | | |
Collapse
|
8
|
Zabelin AA, Shkuropatova VA, Makhneva ZK, Moskalenko AA, Shuvalov VA, Shkuropatov AY. Chemically modified reaction centers of photosystem II: Exchange of pheophytin a with 7-deformyl-7-hydroxymethyl-pheophytin b. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2014; 1837:1870-1881. [DOI: 10.1016/j.bbabio.2014.08.004] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2014] [Revised: 08/14/2014] [Accepted: 08/19/2014] [Indexed: 11/28/2022]
|
9
|
Ultrafast infrared spectroscopy in photosynthesis. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2014; 1847:2-11. [PMID: 24973600 DOI: 10.1016/j.bbabio.2014.06.006] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/14/2014] [Revised: 06/17/2014] [Accepted: 06/18/2014] [Indexed: 11/22/2022]
Abstract
In recent years visible pump/mid-infrared (IR) probe spectroscopy has established itself as a key technology to unravel structure-function relationships underlying the photo-dynamics of complex molecular systems. In this contribution we review the most important applications of mid-infrared absorption difference spectroscopy with sub-picosecond time-resolution to photosynthetic complexes. Considering several examples, such as energy transfer in photosynthetic antennas and electron transfer in reaction centers and even more intact structures, we show that the acquisition of ultrafast time resolved mid-IR spectra has led to new insights into the photo-dynamics of the considered systems and allows establishing a direct link between dynamics and structure, further strengthened by the possibility of investigating the protein response signal to the energy or electron transfer processes. This article is part of a Special Issue entitled: Vibrational spectroscopies and bioenergetic systems.
Collapse
|
10
|
Zabelin AA, Shkuropatova VA, Shuvalov VA, Shkuropatov AY. FTIR spectroscopy of the reaction center of Chloroflexus aurantiacus: Photoreduction of the bacteriopheophytin electron acceptor. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2011; 1807:1013-21. [DOI: 10.1016/j.bbabio.2011.05.018] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2011] [Revised: 05/18/2011] [Accepted: 05/19/2011] [Indexed: 11/25/2022]
|
11
|
Shibuya Y, Takahashi R, Okubo T, Suzuki H, Sugiura M, Noguchi T. Hydrogen Bond Interactions of the Pheophytin Electron Acceptor and Its Radical Anion in Photosystem II As Revealed by Fourier Transform Infrared Difference Spectroscopy. Biochemistry 2009; 49:493-501. [DOI: 10.1021/bi9018829] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Yuichi Shibuya
- Institute of Materials Science, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| | - Ryouta Takahashi
- Institute of Materials Science, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| | - Tatsunori Okubo
- Institute of Materials Science, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| | - Hiroyuki Suzuki
- Institute of Materials Science, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| | - Miwa Sugiura
- Cell-Free Science and Technology Research Center, Ehime University, Matsuyama, Ehime 790-8577, Japan
| | - Takumi Noguchi
- Institute of Materials Science, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| |
Collapse
|
12
|
Kato Y, Sugiura M, Oda A, Watanabe T. Spectroelectrochemical determination of the redox potential of pheophytin a, the primary electron acceptor in photosystem II. Proc Natl Acad Sci U S A 2009; 106:17365-70. [PMID: 19805064 PMCID: PMC2765088 DOI: 10.1073/pnas.0905388106] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2009] [Indexed: 02/07/2023] Open
Abstract
Thin-layer cell spectroelectrochemistry, featuring rigorous potential control and rapid redox equilibration within the cell, was used to measure the redox potential E(m)(Phe a/Phe a(-)) of pheophytin (Phe) a, the primary electron acceptor in an oxygen-evolving photosystem (PS) II core complex from a thermophilic cyanobacterium Thermosynechococcus elongatus. Interferences from dissolved O(2) and water reductions were minimized by airtight sealing of the sample cell added with dithionite and mercury plating on the gold minigrid working electrode surface, respectively. The result obtained at a physiological pH of 6.5 was E(m)(Phe a/Phe a(-)) = -505 + or - 6 mV vs. SHE, which is by approximately 100 mV more positive than the values measured approximately 30 years ago at nonphysiological pH and widely accepted thereafter in the field of photosynthesis research. Using the P680* - Phe a free energy difference, as estimated from kinetic analyses by previous authors, the present result would locate the E(m)(P680/P680(+)) value, which is one of the key parameters but still resists direct measurements, at approximately +1,210 mV. In view of these pieces of information, a renewed diagram is proposed for the energetics in PS II.
Collapse
Affiliation(s)
- Yuki Kato
- Institute of Industrial Science, University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan; and
| | - Miwa Sugiura
- Cell-Free Science and Technology Research Center, Ehime University, Bunkyo-cho, Matsuyama, Ehime 790-8577, Japan
| | - Akinori Oda
- Institute of Industrial Science, University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan; and
| | - Tadashi Watanabe
- Institute of Industrial Science, University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan; and
| |
Collapse
|
13
|
Mehta N, Srikant V, Datta SN. Quantum chemical identification of blue and red forms of protonated pheophytin-a dianion. ACTA ACUST UNITED AC 2009. [DOI: 10.1016/j.theochem.2008.11.014] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
|
14
|
Primary charge separation in the photosystem II core from Synechocystis: a comparison of femtosecond visible/midinfrared pump-probe spectra of wild-type and two P680 mutants. Biophys J 2008; 94:4783-95. [PMID: 18326665 DOI: 10.1529/biophysj.107.122242] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
It is now quite well accepted that charge separation in PS2 reaction centers starts predominantly from the accessory chlorophyll B(A) and not from the special pair P(680). To identify spectral signatures of B(A,) and to further clarify the process of primary charge separation, we compared the femtosecond-infrared pump-probe spectra of the wild-type (WT) PS2 core complex from the cyanobacterium Synechocystis sp. PCC 6803 with those of two mutants in which the histidine residue axially coordinated to P(B) (D2-His(197)) has been changed to Ala or Gln. By analogy with the structure of purple bacterial reaction centers, the mutated histidine is proposed to be indirectly H-bonded to the C(9)=O carbonyl of the putative primary donor B(A) through a water molecule. The constructed mutations are thus expected to perturb the vibrational properties of B(A) by modifying the hydrogen bond strength, possibly by displacing the H-bonded water molecule, and to modify the electronic properties and the charge localization of the oxidized donor P(680)(+). Analysis of steady-state light-induced Fourier transform infrared difference spectra of the WT and the D2-His(197)Ala mutant indeed shows that a modification of the axially coordinating ligand to P(B) induces a charge redistribution of P(680)(+). In addition, a comparison of the time-resolved visible/midinfrared spectra of the WT and mutants has allowed us to investigate the changes in the kinetics of primary charge separation induced by the mutations and to propose a band assignment identifying the characteristic vibrations of B(A).
Collapse
|
15
|
Kern J, Renger G. Photosystem II: structure and mechanism of the water:plastoquinone oxidoreductase. PHOTOSYNTHESIS RESEARCH 2007; 94:183-202. [PMID: 17634752 DOI: 10.1007/s11120-007-9201-1] [Citation(s) in RCA: 107] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2006] [Accepted: 05/16/2007] [Indexed: 05/07/2023]
Abstract
This mini-review briefly summarizes our current knowledge on the reaction pattern of light-driven water splitting and the structure of Photosystem II that acts as a water:plastoquinone oxidoreductase. The overall process comprises three types of reaction sequences: (a) light-induced charge separation leading to formation of the radical ion pair P680+*QA(-*) ; (b) reduction of plastoquinone to plastoquinol at the QB site via a two-step reaction sequence with QA(-*) as reductant and (c) oxidative water splitting into O2 and four protons at a manganese-containing catalytic site via a four-step sequence driven by P680+* as oxidant and a redox active tyrosine YZ acting as mediator. Based on recent progress in X-ray diffraction crystallographic structure analysis the array of the cofactors within the protein matrix is discussed in relation to the functional pattern. Special emphasis is paid on the structure of the catalytic sites of PQH2 formation (QB-site) and oxidative water splitting (Mn4OxCa cluster). The energetics and kinetics of the reactions taking place at these sites are presented only in a very concise manner with reference to recent up-to-date reviews. It is illustrated that several questions on the mechanism of oxidative water splitting and the structure of the catalytic sites are far from being satisfactorily answered.
Collapse
Affiliation(s)
- Jan Kern
- Institut für Chemie, Max-Volmer-Laboratorium für Biophysikalische Chemie, Technische Universität Berlin, Strasse des 17. Juni 135, 10623, Berlin, Germany.
| | | |
Collapse
|
16
|
Pawlowicz NP, Groot ML, van Stokkum IHM, Breton J, van Grondelle R. Charge separation and energy transfer in the photosystem II core complex studied by femtosecond midinfrared spectroscopy. Biophys J 2007; 93:2732-42. [PMID: 17573421 PMCID: PMC1989691 DOI: 10.1529/biophysj.107.105452] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The core of photosystem II (PSII) of green plants contains the reaction center (RC) proteins D1D2-cytb559 and two core antennas CP43 and CP47. We have used time-resolved visible pump/midinfrared probe spectroscopy in the region between 1600 and 1800 cm(-1) to study the energy transfer and charge separation events within PSII cores. The absorption difference spectra in the region of the keto and ester chlorophyll modes show spectral evolution with time constants of 3 ps, 27 ps, 200 ps, and 2 ns. Comparison of infrared (IR) difference spectra obtained for the isolated antennas CP43 and CP47 and the D1D2-RC with those measured for the PSII core allowed us to identify the features specific for each of the PSII core components. From the presence of the CP43 and CP47 specific features in the spectra up to time delays of 20-30 ps, we conclude that the main part of the energy transfer from the antennas to the RC occurs on this timescale. Direct excitation of the pigments in the RC evolution associated difference spectra to radical pair formation of PD1+PheoD1- on the same timescale as multi-excitation annihilation and excited state equilibration within the antennas CP43 and CP47, which occur within approximately 1-3 ps. The formation of the earlier radical pair ChlD1+PheoD1-, as identified in isolated D1D2 complexes with time-resolved mid-IR spectroscopy is not observed in the current data, probably because of its relatively low concentration. Relaxation of the state PD1+PheoD1-, caused by a drop in free energy, occurs in 200 ps in closed cores. We conclude that the kinetic model proposed earlier for the energy and electron transfer dynamics within the D1D2-RC, plus two slowly energy-transferring antennas C43 and CP47 explain the complex excited state and charge separation dynamics in the PSII core very well. We further show that the time-resolved IR-difference spectrum of PD1+PheoD1- as observed in PSII cores is virtually identical to that observed in the isolated D1D2-RC complex of PSII, demonstrating that the local structure of the primary reactants has remained intact in the isolated D1D2 complex.
Collapse
Affiliation(s)
- N P Pawlowicz
- Faculty of Sciences, Department of Physics and Astronomy, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands.
| | | | | | | | | |
Collapse
|
17
|
Mehta N, Datta SN. Theoretical Determination of the Standard Reduction Potentials of Pheophytin-ainN,N-Dimethyl Formamide and Membrane. J Phys Chem B 2007; 111:7210-7. [PMID: 17536851 DOI: 10.1021/jp067383t] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Quantum mechanical/molecular mechanics (QM/MM) calculations were performed on the neutral, anionic, and dianionic forms of Pheophytin-a (Pheo-a) in N,N-dimethyl formamide (DMF) in order to calculate the absolute free energy of reduction of Pheo-a in solution. The geometry of the solvated species was optimized by restricted open-shell density functional treatment (ROB3LYP) using the 6-31G(d) basis set for the molecular species while the primary solvent shell consisting of 45 DMF molecules was treated by the MM method using the universal force field (UFF). Electronic energies of the neutral, anionic, and dianionic species were obtained by carrying out single point density functional theory (DFT) calculations using the 6-311+G(2d,2p) basis set on the respective ONIOM optimized geometries. The CHARMM27 force field was used to account for the dynamical nature of the primary solvation shell of 45 DMF molecules. In the calculations using solvent shells, the required atomic charges for each solvent molecule were obtained from ROB3LYP/6-31G(d) calculation on a single isolated DMF molecule. Randomly sampled configurations generated by the Monte Carlo (MC) technique were used to determine the contribution of the primary shell to the free energy of solvation of the three species. The dynamical nature of the primary shell significantly corrects the free energy of solvation. Frequency calculations at the ROB3LYP/6-31G(d) level were carried out on the optimized geometries of truncated 47-atom models of the neutral and ionic species in vacuum so as to determine the differences in thermal energy and molecular entropy. The Born energy of ion-dielectric interaction, the Onsager energy of dipole-dielectric interaction, and the Debye-Hückel energy of ion-ionic cloud interaction for the pheophytin-solvent aggregate were added as perturbative corrections. The Born interaction also makes a large contribution to the absolute free energy of reduction. An implicit solvation model (DPCM) was also employed for the calculation of standard reduction potentials in DMF. Both the models were successful in reproducing the standard reduction potentials. An explicit solvent treatment(QM/MM/MC + Born + Onsager + Debye corrections) yielded the one electron reduction potential of Pheo-a as -0.92 +/- 0.27 V and the two electron reduction potential as -1.34 +/- 0.25 V at 298.15 K, while the implicit solvent treatment yielded the corresponding values as -1.03 +/- 0.17 and -1.30 +/- 0.17 V, respectively. The calculated values more or less agree with the experimental midpoint potentials of -0.90 and -1.25 V, respectively. Moreover, a numerical finite difference Poisson-Boltzmann solver (FDPB) along with the DPCM methodology was employed to obtain the reduction potential of pheophytin in the thylakoid membrane. The calculated reduction potential value of -0.58 V is in excellent agreement with the reported value -0.61 V.
Collapse
Affiliation(s)
- Nital Mehta
- Department of Chemistry, Indian Institute of Technology-Bombay, Powai, Mumbai, India
| | | |
Collapse
|
18
|
Okubo T, Noguchi T. Selective detection of the structural changes upon photoreactions of several redox cofactors in photosystem II by means of light-induced ATR-FTIR difference spectroscopy. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2007; 66:863-8. [PMID: 16872888 DOI: 10.1016/j.saa.2006.05.001] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2006] [Revised: 04/08/2006] [Accepted: 05/02/2006] [Indexed: 05/11/2023]
Abstract
Attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy was applied for the first time to detect the structural changes upon photoreactions of redox cofactors in photosystem II (PSII). The PSII-enriched membranes from spinach were adsorbed on the surface of a silicon prism, and FTIR measurements of various redox cofactors were performed for the same sample but under different conditions by exchanging buffers in a flow cell. Light-induced FTIR difference spectra upon redox reactions of the oxygen-evolving Mn cluster, the primary quinone electron acceptor QA, the redox-active tyrosine YD, the primary electron acceptor pheophytin, and the primary electron donor chlorophyll P680 were successively recorded in buffers including different redox reagents and inhibitors. All of these cofactors remained active in the PSII membranes on the silicon surface, and the resultant spectra were basically identical to those previously recorded by the conventional transmission method. These ATR-FTIR measurements enable accurate comparison between reactions of different active sites in a single PSII sample. The present results demonstrated that the ATR-FTIR spectroscopy is a useful technique for investigation of the reaction mechanism of PSII.
Collapse
Affiliation(s)
- Tatsunori Okubo
- Institute of Materials Science, University of Tsukuba, Tsukuba, Ibaraki 305-8573, Japan
| | | |
Collapse
|
19
|
Nabedryk E, Paddock ML, Okamura MY, Breton J. An Isotope-Edited FTIR Investigation of the Role of Ser-L223 in Binding Quinone (QB) and Semiquinone (QB-) in the Reaction Center from Rhodobacter sphaeroides. Biochemistry 2005; 44:14519-27. [PMID: 16262252 DOI: 10.1021/bi051328d] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
In the photosynthetic reaction center (RC) from the purple bacterium Rhodobacter sphaeroides, proton-coupled electron-transfer reactions occur at the secondary quinone (Q(B)) site. Several nearby residues are important for both binding and redox chemistry involved in the light-induced conversion from Q(B) to quinol Q(B)H(2). Ser-L223 is one of the functionally important residues located near Q(B). To obtain information on the interaction between Ser-L223 and Q(B) and Q(B)(-), isotope-edited Q(B)(-)/Q(B) FTIR difference spectra were measured in a mutant RC in which Ser-L223 is replaced with Ala and compared to the native RC. The isotope-edited IR fingerprint spectra for the C=O [see text] and C=C [see text] modes of Q(B) (Q(B)(-)) in the mutant are essentially the same as those of the native RC. These findings indicate that highly equivalent interactions of Q(B) and Q(B)(-) with the protein occur in both native and mutant RCs. The simplest explanation of these results is that Ser-L223 is not hydrogen bonded to Q(B) or Q(B)(-) but presumably forms a hydrogen bond to a nearby acid group, preferentially Asp-L213. The rotation of the Ser OH proton from Asp-L213 to Q(B)(-) is expected to be an important step in the proton transfer to the reduced quinone. In addition, the reduced quinone remains firmly bound, indicating that other distinct hydrogen bonds are more important for stabilizing Q(B)(-). Implications on the design features of the Q(B) binding site are discussed.
Collapse
Affiliation(s)
- Eliane Nabedryk
- Service de Bioénergétique, CEA-Saclay, 91191 Gif-sur-Yvette Cedex, France.
| | | | | | | |
Collapse
|
20
|
Groot ML, Pawlowicz NP, van Wilderen LJGW, Breton J, van Stokkum IHM, van Grondelle R. Initial electron donor and acceptor in isolated Photosystem II reaction centers identified with femtosecond mid-IR spectroscopy. Proc Natl Acad Sci U S A 2005; 102:13087-92. [PMID: 16135567 PMCID: PMC1196200 DOI: 10.1073/pnas.0503483102] [Citation(s) in RCA: 154] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2005] [Indexed: 11/18/2022] Open
Abstract
Despite the apparent similarity between the plant Photosystem II reaction center (RC) and its purple bacterial counterpart, we show in this work that the mechanism of charge separation is very different for the two photosynthetic RCs. By using femtosecond visible-pump-mid-infrared probe spectroscopy in the region of the chlorophyll ester and keto modes, between 1,775 and 1,585 cm(-1), with 150-fs time resolution, we show that the reduction of pheophytin occurs on a 0.6- to 0.8-ps time scale, whereas P+, the precursor state for water oxidation, is formed after approximately 6 ps. We conclude therefore that in the Photosystem II RC the primary charge separation occurs between the "accessory chlorophyll" Chl(D1) and the pheophytin on the so-called active branch.
Collapse
Affiliation(s)
- Marie Louise Groot
- Faculty of Sciences, Vrije Universiteit, 1081 HV, Amsterdam, The Netherlands.
| | | | | | | | | | | |
Collapse
|
21
|
Berthomieu C, Nabedryk E, Mäntele W, Breton J. Characterization by FTIR spectroscopy of the photoreduction of the primary quinone acceptor QA in photosystem II. FEBS Lett 2004; 269:363-7. [PMID: 15452972 DOI: 10.1016/0014-5793(90)81194-s] [Citation(s) in RCA: 104] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Molecular changes associated with the photoreduction of the primary quinone acceptor Qa of photosystem II have been characterized by Fourier transform infrared spectroscopy. This reaction was light-induced at room temperature on photosystem II membranes in the presence of hydroxylamine and diuron. A positive signal at 1478 cm-1 is assigned to the C---O stretching mode of the semiquinone anion, and can be correlated to the negative C=O mode(s) of the neutral QA at 1645 cm-1 and/or 16 cm-1. Analogies with bacterial reaction center are found in the amide I absorption range at 1672 cm-1, 1653 cm-1 and 1630 cm-1. The stabilization of QA- does not result from a large protein conformation change, but involves perturbations of several amino acid vibrations. At 1658 cm-1, a negative feature sensitive to 1H-2H exchange is tentatively assigned to a NH2 histidine mode, while tryptophan D2252 could contribute to the signal at 1560/1550 cm-1.
Collapse
Affiliation(s)
- C Berthomieu
- Service de Biophysique, CEN Saclay, 91191 Gif-sur-Yvette cedex, France
| | | | | | | |
Collapse
|
22
|
Cuni A, Xiong L, Sayre R, Rappaport F, Lavergne J. Modification of the pheophytin midpoint potential in photosystem II: Modulation of the quantum yield of charge separation and of charge recombination pathways. Phys Chem Chem Phys 2004. [DOI: 10.1039/b407511k] [Citation(s) in RCA: 52] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
23
|
Dorlet P, Xiong L, Sayre RT, Un S. High field EPR study of the pheophytin anion radical in wild type and D1-E130 mutants of photosystem II in Chlamydomonas reinhardtii. J Biol Chem 2001; 276:22313-6. [PMID: 11294881 DOI: 10.1074/jbc.m102475200] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
The intermediate electron acceptor in photosystem II is a pheophytin molecule. The radical anion of this molecule was studied using high field electron paramagnetic resonance in a series of Chlamydomonas reinhardtii mutants. Glutamic acid 130 of the D1 polypeptide is thought to hydrogen bond the ring V carbonyl group of this radical. Mutations at this site, designed to weaken or remove this hydrogen bond, strongly affected the g tensor of the radical. The upward shift of the g(x) component followed the decreasing hydrogen bonding capacity of the amino acid introduced. This behavior is similar to that of tyrosyl and semiquinone radicals. It is also consistent with the optical spectra of the pheophytin in similar mutants. Density functional calculations were used to calculate the g tensors and rationalize the observed trend in the variation of the g(x) value for pheophytin and bacteriopheophytin radical. The theoretical results support the experimental observations and demonstrate the sensitivity of g values to the electrostatic protein environment for these types of radicals.
Collapse
Affiliation(s)
- P Dorlet
- Fom the Département de Biologie Cellulaire et Moléculaire, Section de Bioénergétique, CNRS URA2096, Commissariat à l'Energie Atomique, Saclay, F-91191 Gif-sur-Yvette, France
| | | | | | | |
Collapse
|
24
|
O'Malley PJ. Density functional predicted geometries and vibrational frequencies of the neutral and anion-radical form of pheophytin: relevance to electron transfer in photosynthetic reaction centres. Chem Phys Lett 2000. [DOI: 10.1016/s0009-2614(00)01146-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
|
25
|
Homblé F, Raussens V, Ruysschaert JM, Grouzis JP, Goormaghtigh E. Secondary structure of the plasma membrane ATPase of corn roots (Zea mais L.): An attenuated total reflection FTIR spectroscopy study. ACTA ACUST UNITED AC 1998. [DOI: 10.1002/(sici)1520-6343(1996)2:3<193::aid-bspy6>3.0.co;2-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
|
26
|
Peterman EJ, van Amerongen H, van Grondelle R, Dekker JP. The nature of the excited state of the reaction center of photosystem II of green plants: a high-resolution fluorescence spectroscopy study. Proc Natl Acad Sci U S A 1998; 95:6128-33. [PMID: 9600929 PMCID: PMC27597 DOI: 10.1073/pnas.95.11.6128] [Citation(s) in RCA: 71] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/1997] [Accepted: 03/16/1998] [Indexed: 02/07/2023] Open
Abstract
We studied the electronically excited state of the isolated reaction center of photosystem II with high-resolution fluorescence spectroscopy at 5 K and compared the obtained spectral features with those obtained earlier for the primary electron donor. The results show that there is a striking resemblance between the emitting and charge-separating states in the photosystem II reaction center, such as a very similar shape of the phonon wing with characteristic features at 19 and 80 cm-1, almost identical frequencies of a number of vibrational modes, a very similar double-Gaussian shape of the inhomogeneous distribution function, and relatively strong electron-phonon coupling for both states. We suggest that the emission at 5 K originates either from an exciton state delocalized over the inactive branch of the photosystem or from a fraction of the primary electron donor that is long-lived at 5 K. The latter possibility can be explained by a distribution of the free energy difference of the primary charge separation reaction around zero. Both possibilities are in line with the idea that the state that drives primary charge separation in the reaction center of photosystem II is a collective state, with contributions from all chlorophyll molecules in the central part of the complex.
Collapse
Affiliation(s)
- E J Peterman
- Department of Physics and Astronomy and Institute for Molecular Biological Sciences, Vrije Universiteit, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | | | | | | |
Collapse
|
27
|
Yruela I, Allakhverdiev SI, Ibarra JV, Klimov VV. Bicarbonate binding to the water-oxidizing complex in the photosystem II. A Fourier transform infrared spectroscopy study. FEBS Lett 1998; 425:396-400. [PMID: 9563501 DOI: 10.1016/s0014-5793(98)00271-3] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
The light-induced Fourier transform infrared difference (FT-IR) spectrum originating from the donor side of O2-evolving photosystem (PS) II was obtained in non-depleted and CO2-depleted PSII membrane preparations. The observed spectrum free of contributions from the acceptor side signals was achieved by employing 2 mM/18 mM ferri-/ferrocyanide as a redox couple. This spectrum showed main positive bands at 1589 and 1365 cm(-1) and negative bands at 1560, 1541, 1522 and 1507 cm(-1). CO-depleted PSII preparations showed a quite different spectrum. The main positive and negative bands disappeared after depletion of bicarbonate. The addition of bicarbonate partially restored those bands again. Comparison between difference FT-IR spectra of untreated and bicarbonate-depleted PSII membranes indicated that the positive bands at 1589 and 1365 cm(-1) can be assigned to COO- stretching modes from bicarbonate. The higher frequency corresponds to u[as] (COO-) and the lower frequency to u[s] (COO-). 13C-Labeling FT-IR measurements confirmed these findings and also suggested that the negative band at 1560 cm(-1) can be ascribed to u[as] (COO-). The data are discussed in the framework of the suggestion that bicarbonate can be a ligand to the Mn-containing water-oxidizing complex of PSII.
Collapse
Affiliation(s)
- I Yruela
- Estación Experimental Aula Dei, Consejo Superior de Investigaciones Científicas, Zaragoza, Spain.
| | | | | | | |
Collapse
|
28
|
Nabedryk E, Andrianambinintsoa S, Dejonghe D, Breton J. FTIR spectroscopy of the photoreduction of the bacteriopheophytin electron acceptor in reaction centers of Rb. sphaeroides and Rps. viridis. Chem Phys 1995. [DOI: 10.1016/0301-0104(94)00430-i] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
|
29
|
|
30
|
Allakhverdiev SI, Ahmed A, Tajmir-Riahi HA, Klimov VV, Carpentier R. Light-induced Fourier transform infrared spectrum of the cation radical P680+. FEBS Lett 1994; 339:151-4. [PMID: 8313965 DOI: 10.1016/0014-5793(94)80404-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
The structure of the primary electron donor of photosystem II, P680, is still under debate. It is not decided if it is composed of a chlorophyll (Chl) monomer or dimer. In this study, Fourier transform infrared (FTIR) spectroscopy was used to analyze the changes in the vibration modes occurring upon photooxidation of P680 in a Mn-depleted PS II preparation. It is demonstrated that illumination of the above in the presence of artificial electron acceptors results in a light-minus-dark absorbance change typical of the formation of P680+. The light-minus-dark difference FTIR spectrum obtained under similar conditions is characterized by two negative peaks located at 1694 and 1652 or 1626 cm-1 that can be assigned to the 9-keto groups of the P680 Chl, the latter band being indicative of a strongly associated group. These vibrations are shifted to 1714 and 1676 cm-1, respectively, in the positive features of the difference spectrum attributed to P680+. The occurrence of two pairs of bands attributed to 9-keto groups is discussed in terms of P680 being formed of a Chl dimer.
Collapse
Affiliation(s)
- S I Allakhverdiev
- Centre de recherche en photobiophysique, Université du Québec à Trois-Rivières, Canada
| | | | | | | | | |
Collapse
|
31
|
|
32
|
Andersson B, Barber J. Composition, Organization, and Dynamics of Thylakoid Membranes. MOLECULAR PROCESSES OF PHOTOSYNTHESIS 1994. [DOI: 10.1016/s1569-2558(08)60394-x] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
|
33
|
Chumanov G, Picorel R, Toon S, Seibert M, Cotton TM. STRUCTURAL AND FUNCTIONAL INTEGRITY OF THE PHOTOSYSTEM II REACTION CENTER ON SILVER ELECTRODES: FLUORESCENCE AND REDOX PROBES. Photochem Photobiol 1993. [DOI: 10.1111/j.1751-1097.1993.tb04965.x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
|
34
|
Nabedryk E, Robles SJ, Goldman E, Youvan DC, Breton J. Probing the primary donor environment in the histidineM200-->leucine and histidineL173-->leucine heterodimer mutants of Rhodobacter capsulatus by light-induced Fourier transform infrared difference spectroscopy. Biochemistry 1992; 31:10852-8. [PMID: 1420198 DOI: 10.1021/bi00159a028] [Citation(s) in RCA: 29] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Light-induced P+QB-/PQB FTIR difference spectra of reaction centers (RCs) have been obtained from chromatophores lacking light-harvesting B800-850 antenna for Rhodobacter capsulatus wild type (WT) and for the two mutants HisM200-->Leu and HisL173-->Leu. The primary donor (P) in both mutants consists of a bacteriochlorophyll-bacteriopheophytin heterodimer. The most prominent difference between the WT and the mutant spectra is in the 1600-1200-cm-1 region. The WT spectrum displays large positive bands at approximately 1290, 1500-1430, and 1580-1530 cm-1. These three bands are either small or altogether absent in the heterodimer spectra. In addition, both heterodimer spectra compare well with the electrochemically generated BChla+/BChla spectrum [Mäntele, W.G., Wollenweber, A. M., Nabedryk, E., & Breton, J. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 8468-8472]. These observations indicate that the positive charge is localized on the monomeric BChl in the heterodimers. The overall shape of the ester and keto C = O signals in the BChla+/BChla spectrum is maintained in the in situ spectra although significant differences are observed in the frequency, width, and splitting of the bands. The shape of the signal at 1757/1744 cm-1 in HisL173-->Leu is comparable to the 1751/1737-cm-1 signal of BChla+/BChla in tetrahydrofuran, indicating a free 10a ester C = O of PM in HisL173-->Leu. The reduced amplitude of the negative 1740-cm-1 feature in both HisM200-->Leu and WT spectra suggests a hydrogen-bonded 10a ester C = O for PL.(ABSTRACT TRUNCATED AT 250 WORDS)
Collapse
Affiliation(s)
- E Nabedryk
- Département de Biologie Cellulaire et Moléculaire, Centre d'Etudes Nucléaires de Saclay, Gif-sur-Yvette, France
| | | | | | | | | |
Collapse
|
35
|
Hienerwadel R, Thibodeau D, Lenz F, Nabedryk E, Breton J, Kreutz W, Mäntele W. Time-resolved infrared spectroscopy of electron transfer in bacterial photosynthetic reaction centers: dynamics of binding and interaction upon QA and QB reduction. Biochemistry 1992; 31:5799-808. [PMID: 1610825 DOI: 10.1021/bi00140a016] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Light-induced forward electron transfer in the bacterial photosynthetic reaction center from Rhodobacter sphaeroides was investigated by time-resolved infrared spectroscopy. Using a highly sensitive kinetic photometer based on a tunable IR diode laser source [Mäntele, W., Hienerwadel, R., Lenz, F., Riedel, W. J., Grisar, R., & Tacke, M. (1990a) Spectrosc. Int. 2, 29-35], molecular processes concomitant with electron-transfer reactions were studied in the microsecond-to-second time scale. Infrared (IR) signals in the 1780-1430-cm-1 spectral region, appearing within the instrument time resolution of about 0.5 microseconds, could be assigned to molecular changes of the primary electron donor upon formation of a radical cation and to modes of the primary quinone electron acceptor QA and its environment upon formation of QA-. These IR signals are consistent with steady-state FTIR difference spectra of the P+Q- formation [Mäntele, W., Nabedryk, E., Tavitian, B. A., Kreutz, W., & Breton, J. (1985) FEBS Lett. 187, 227-232; Mäntele, W., Wollenweber, A., Nabedryk, E., & Breton, J. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 8468-8472; Nabedryk, E., Bagley, K. A., Thibodeau, D. L., Bauscher, M., Mäntele, W., & Breton, J. (1990) FEBS Lett. 266, 59-62] and with time-resolved FTIR studies [Thibodeau, D. L., Nabedryk, E., Hienerwadel, R., Lenz, F., Mäntele, W., & Breton, J. (1990) Biochim. Biophys. Acta 1020, 253-259]. At given wavenumbers, kinetic components with a half-time of approximately 120 microseconds were observed and attributed to QA----QB electron transfer. The time-resolved IR signals, in contrast to steady-state experiments where full protein relaxation after electron transfer can occur, allow us to follow directly the modes of QA and QB and their protein environment under conditions of forward electron transfer. Apart from signals attributed to the primary electron donor, signals are proposed to arise not only from the C = O and C = C vibrational modes of the neutral quinones and from the C-O and C-C vibrations of their semiquinone anion form but also from amino acid groups forming their binding sites. Some of the signals appearing with the instrument rise time as well as the transient 120-microseconds signals are interpreted in terms of binding and interaction of the primary and secondary quinone electron acceptor in the Rb. sphaeroides reaction center and of the conformational changes in their binding site.(ABSTRACT TRUNCATED AT 400 WORDS)
Collapse
Affiliation(s)
- R Hienerwadel
- Institut für Biophysik und Strahlenbiologie, Universität Freiburg, FRG
| | | | | | | | | | | | | |
Collapse
|
36
|
Kwa SL, Newell WR, van Grondelle R, Dekker JP. The reaction center of photosystem II studied with polarized fluorescence spectroscopy. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 1992. [DOI: 10.1016/0005-2728(92)90027-y] [Citation(s) in RCA: 47] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
|
37
|
Andersson B, Franzén LG. Chapter 5 The two photosystems of oxygenic photosynthesis. ACTA ACUST UNITED AC 1992. [DOI: 10.1016/s0167-7306(08)60173-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/19/2023]
|
38
|
Spectroelectrochemical titrations and cyclic voltammetry of methyl pheophorbide in acid: Possible role of pheophytin enol iminium in the primary process of PS II. ACTA ACUST UNITED AC 1991. [DOI: 10.1016/0302-4598(91)80006-o] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
|
39
|
Kovacic P, Kiser PF, Smith KM, Feinberg BA. Spectroelectrochemical titrations and cyclic voltammetry of methyl pheophorbide in acid: Possible role of pheophytin enol iminium in the primary process of PS II. ACTA ACUST UNITED AC 1991. [DOI: 10.1016/0022-0728(91)85656-a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
|
40
|
Nabedryk E, Bagley KA, Thibodeau DL, Bauscher M, Mäntele W, Breton J. A protein conformational change associated with the photoreduction of the primary and secondary quinones in the bacterial reaction center. FEBS Lett 1990; 266:59-62. [PMID: 2365070 DOI: 10.1016/0014-5793(90)81506-j] [Citation(s) in RCA: 84] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
A comparison is made between the PQA----P+QA- and PQAQB----P+QAQB-transitions in Rps. viridis and Rb. sphaeroides reaction centers (RCs) by the use of light-induced Fourier transform infrared (FTIR) difference spectroscopy. In Rb. sphaeroides RCs, we identify a signal at 1650 cm-1 which is present in the P+QA-minus-PQA spectrum and not in the P+QAQB(-)-minus-PQAQB spectrum. In contrast, this signal is present in both P+QA(-)-minus-PQA- and P+QAQB(-)-minus-PQAQB spectra of Rps. viridis RCs. These data are interpreted in terms of a conformational change of the protein backbone near QA (possible at the peptide C = O of a conserved alanine residue in the QA pocket) and of the different bonding interactions of QB with the protein in the RC of the two species.
Collapse
Affiliation(s)
- E Nabedryk
- Service de Biophysique, C.E.N. Saclay, Gif-sur-Yvette, France
| | | | | | | | | | | |
Collapse
|
41
|
Thibodeau DL, Breton J, Berthomieu C, Bagley KA, Mäntele W, Nabedryk E. Steady-State and Time-Resolved FTIR Spectroscopy of Quinones in Bacterial Reaction Centers. ACTA ACUST UNITED AC 1990. [DOI: 10.1007/978-3-642-61297-8_9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/19/2023]
|
42
|
Infrared Difference Spectroscopy of Electro-chemically Generated Redox States in Bacterial Reaction Centers. ACTA ACUST UNITED AC 1990. [DOI: 10.1007/978-3-642-61297-8_4] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/08/2023]
|