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Rykaczewski KA, Sabourin KE, Goo PJ, Griggs LH, Jain S, Reed PAM, Langenhan JM. Generation of a glycosylated asparagine residue through chemoselective acylation of a glycosylhydrazide. Carbohydr Res 2020; 493:108022. [PMID: 32516600 PMCID: PMC7325706 DOI: 10.1016/j.carres.2020.108022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Revised: 04/23/2020] [Accepted: 04/26/2020] [Indexed: 11/23/2022]
Abstract
Herein, we report the first selective anomeric N-acylation of a glycosylhydrazide. We show that this transformation can be harnessed to generate amino acid building blocks including FmocAsn(GlcNAc)OH (1), a residue that has been previously shown to be a competent reagent in the solid-phase peptide synthesis of N-linked glycopeptides.
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Affiliation(s)
| | - Kate E Sabourin
- Department of Chemistry, Seattle University, Seattle, WA, 98122, USA
| | - Paul J Goo
- Department of Chemistry, Seattle University, Seattle, WA, 98122, USA
| | - Lydia H Griggs
- Department of Chemistry, Seattle University, Seattle, WA, 98122, USA
| | - Saumya Jain
- Department of Chemistry, Seattle University, Seattle, WA, 98122, USA
| | - Paxton A M Reed
- Department of Chemistry, Seattle University, Seattle, WA, 98122, USA
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2
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Vargas EL, Velázquez JA, Rodrigo E, Reinecke H, Rodríguez-Hernández J, Fernández-Mayoralas A, Gallardo A, Cid MB. p Ka Modulation of Pyrrolidine-Based Catalytic Polymers Used for the Preparation of Glycosyl Hydrazides at Physiological pH and Temperature. ACS APPLIED BIO MATERIALS 2020; 3:1955-1967. [PMID: 35025318 DOI: 10.1021/acsabm.9b01123] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
Inspired by the ability of enzymes to use the surrounding hydrophobic and/or polarizable groups to modulate the pKa of a given amino acid, we designed a series of soluble polymers able to decrease the basicity of pyrrolidine (from 11.2 to 8.6 pKa units), which clearly increases its aminocatalytic activity at physiological pH in C═N bond formation reactions via ion iminium activation. Other parameters such as charge density, hydrophobic/hydrophilic balance, and aggregation state have been studied as important factors in the catalytic activity of the polymers for a given substrate. To demonstrate the utility of our approach, an optimal pyrrolidine-based catalytic polymer has been used for the formation of C-N bonds between hydrazides and free sugars as the model system for the preparation of glycoconjugates.
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Affiliation(s)
- Emily L Vargas
- Department of Organic Chemistry, Universidad Autónoma de Madrid Cantoblanco, 28049 Madrid, Spain
| | - J Antonio Velázquez
- Department of Organic Chemistry, Universidad Autónoma de Madrid Cantoblanco, 28049 Madrid, Spain
| | - Eduardo Rodrigo
- Department of Organic Chemistry, Universidad Autónoma de Madrid Cantoblanco, 28049 Madrid, Spain
| | - Helmut Reinecke
- Instituto de Ciencia y Tecnologı́a de Polı́meros (ICTP-CSIC), Juan de la Cierva 3, 28006 Madrid, Spain
| | - Juan Rodríguez-Hernández
- Instituto de Ciencia y Tecnologı́a de Polı́meros (ICTP-CSIC), Juan de la Cierva 3, 28006 Madrid, Spain
| | | | - Alberto Gallardo
- Instituto de Ciencia y Tecnologı́a de Polı́meros (ICTP-CSIC), Juan de la Cierva 3, 28006 Madrid, Spain
| | - María Belén Cid
- Department of Organic Chemistry, Universidad Autónoma de Madrid Cantoblanco, 28049 Madrid, Spain
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3
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Østergaard M, Christensen NJ, Hjuler CT, Jensen KJ, Thygesen MB. Glycoconjugate Oxime Formation Catalyzed at Neutral pH: Mechanistic Insights and Applications of 1,4-Diaminobenzene as a Superior Catalyst for Complex Carbohydrates. Bioconjug Chem 2018; 29:1219-1230. [PMID: 29437382 DOI: 10.1021/acs.bioconjchem.8b00019] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The reaction of unprotected carbohydrates with aminooxy reagents to provide oximes is a key method for the construction of glycoconjugates. Aniline and derivatives serve as organocatalysts for the formation of oximes from simple aldehydes, and we have previously reported that aniline also catalyzes the formation of oximes from the more complex aldehydes, carbohydrates. Here, we present a comprehensive study of the effect of aniline analogues on the formation of carbohydrate oximes and related glycoconjugates depending on organocatalyst structure, pH, nucleophile, and carbohydrate, covering more than 150 different reaction conditions. The observed superiority of the 1,4-diaminobenzene (PDA) catalyst at neutral pH is rationalized by NMR analyses and DFT studies of reaction intermediates. Carbohydrate oxime formation at pH 7 is demonstrated by the formation of a bioactive glycoconjugate from a labile, decorated octasaccharide originating from exopolysaccharides of the soil bacterium Mesorhizobium loti. This study of glycoconjugate formation includes the first direct comparison of aniline-catalyzed reaction rates and equilibrium constants for different classes of nucleophiles, including primary oxyamines, secondary N-alkyl oxyamines, as well as aryl and arylsulfonyl hydrazides. We identified 1,4-diaminobenzene as a superior catalyst for the construction of oxime-linked glycoconjugates under mild conditions.
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Affiliation(s)
- Mads Østergaard
- Department of Chemistry, Faculty of Science , University of Copenhagen , Thorvaldsensvej 40 , DK-1871 Frederiksberg C , Denmark
| | - Niels Johan Christensen
- Department of Chemistry, Faculty of Science , University of Copenhagen , Thorvaldsensvej 40 , DK-1871 Frederiksberg C , Denmark
| | - Christian T Hjuler
- Department of Chemistry, Faculty of Science , University of Copenhagen , Thorvaldsensvej 40 , DK-1871 Frederiksberg C , Denmark
| | - Knud J Jensen
- Department of Chemistry, Faculty of Science , University of Copenhagen , Thorvaldsensvej 40 , DK-1871 Frederiksberg C , Denmark
| | - Mikkel B Thygesen
- Department of Chemistry, Faculty of Science , University of Copenhagen , Thorvaldsensvej 40 , DK-1871 Frederiksberg C , Denmark
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Villadsen K, Martos-Maldonado MC, Jensen KJ, Thygesen MB. Chemoselective Reactions for the Synthesis of Glycoconjugates from Unprotected Carbohydrates. Chembiochem 2017; 18:574-612. [DOI: 10.1002/cbic.201600582] [Citation(s) in RCA: 59] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2016] [Indexed: 12/27/2022]
Affiliation(s)
- Klaus Villadsen
- Department of Chemistry; University of Copenhagen; Faculty of Science; Thorvaldsensvej 40 1871 Frederiksberg C Denmark
| | - Manuel C. Martos-Maldonado
- Department of Chemistry; University of Copenhagen; Faculty of Science; Thorvaldsensvej 40 1871 Frederiksberg C Denmark
| | - Knud J. Jensen
- Department of Chemistry; University of Copenhagen; Faculty of Science; Thorvaldsensvej 40 1871 Frederiksberg C Denmark
| | - Mikkel B. Thygesen
- Department of Chemistry; University of Copenhagen; Faculty of Science; Thorvaldsensvej 40 1871 Frederiksberg C Denmark
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5
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Flavell RR, Truillet C, Regan MK, Ganguly T, Blecha JE, Kurhanewicz J, VanBrocklin HF, Keshari KR, Chang CJ, Evans MJ, Wilson DM. Caged [(18)F]FDG Glycosylamines for Imaging Acidic Tumor Microenvironments Using Positron Emission Tomography. Bioconjug Chem 2015; 27:170-8. [PMID: 26649808 DOI: 10.1021/acs.bioconjchem.5b00584] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Solid tumors are hypoxic with altered metabolism, resulting in secretion of acids into the extracellular matrix and lower relative pH, a feature associated with local invasion and metastasis. Therapeutic and diagnostic agents responsive to this microenvironment may improve tumor-specific delivery. Therefore, we pursued a general strategy whereby caged small-molecule drugs or imaging agents liberate their parent compounds in regions of low interstitial pH. In this manuscript, we present a new acid-labile prodrug method based on the glycosylamine linkage, and its application to a class of positron emission tomography (PET) imaging tracers, termed [(18)F]FDG amines. [(18)F]FDG amines operate via a proposed two-step mechanism, in which an acid-labile precursor decomposes to form the common radiotracer 2-deoxy-2-[(18)F]fluoro-d-glucose, which is subsequently accumulated by glucose avid cells. The rate of decomposition of [(18)F]FDG amines is tunable in a systematic fashion, tracking the pKa of the parent amine. In vivo, a 4-phenylbenzylamine [(18)F]FDG amine congener showed greater relative accumulation in tumors over benign tissue, which could be attenuated upon tumor alkalinization using previously validated models, including sodium bicarbonate treatment, or overexpression of carbonic anhydrase. This new class of PET tracer represents a viable approach for imaging acidic interstitial pH with potential for clinical translation.
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Affiliation(s)
- Robert R Flavell
- Department of Radiology and Biomedical Imaging, University of California , San Francisco, California 94158, United States
| | - Charles Truillet
- Department of Radiology and Biomedical Imaging, University of California , San Francisco, California 94158, United States
| | - Melanie K Regan
- Department of Radiology and Biomedical Imaging, University of California , San Francisco, California 94158, United States
| | - Tanushree Ganguly
- Department of Radiology and Biomedical Imaging, University of California , San Francisco, California 94158, United States
| | - Joseph E Blecha
- Department of Radiology and Biomedical Imaging, University of California , San Francisco, California 94158, United States
| | - John Kurhanewicz
- Department of Radiology and Biomedical Imaging, University of California , San Francisco, California 94158, United States
| | - Henry F VanBrocklin
- Department of Radiology and Biomedical Imaging, University of California , San Francisco, California 94158, United States
| | - Kayvan R Keshari
- Department of Radiology and Molecular Pharmacology and Chemistry Program, Memorial Sloan-Kettering Cancer Center , New York, New York 10065, United States
| | - Christopher J Chang
- Departments of Chemistry and Molecular and Cell Biology and the Howard Hughes Medical Institute, University of California , Berkeley, California 94720, United States
| | - Michael J Evans
- Department of Radiology and Biomedical Imaging, University of California , San Francisco, California 94158, United States
| | - David M Wilson
- Department of Radiology and Biomedical Imaging, University of California , San Francisco, California 94158, United States
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6
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dos Santos Filho JM. Mild, Stereoselective, and Highly Efficient Synthesis ofN-Acylhydrazones Mediated by CeCl3·7H2O in a Broad Range of Solvents. European J Org Chem 2014. [DOI: 10.1002/ejoc.201402609] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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7
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Langenhan JM, Mullarky E, Rogalsky DK, Rohlfing JR, Tjaden AE, Werner HM, Rozal LM, Loskot SA. Amphimedosides A–C: Synthesis, Chemoselective Glycosylation, And Biological Evaluation. J Org Chem 2013; 78:1670-6. [DOI: 10.1021/jo302640y] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Joseph M. Langenhan
- Department of Chemistry, Seattle University, Seattle, Washington 98122, United States
| | - Edouard Mullarky
- Department of Chemistry, Seattle University, Seattle, Washington 98122, United States
| | - Derek K. Rogalsky
- Department of Chemistry, Seattle University, Seattle, Washington 98122, United States
| | - James R. Rohlfing
- Department of Chemistry, Seattle University, Seattle, Washington 98122, United States
| | - Anja E. Tjaden
- Department of Chemistry, Seattle University, Seattle, Washington 98122, United States
| | - Halina M. Werner
- Department of Chemistry, Seattle University, Seattle, Washington 98122, United States
| | - Leonardo M. Rozal
- Department of Chemistry, Seattle University, Seattle, Washington 98122, United States
| | - Steven A. Loskot
- Department of Chemistry, Seattle University, Seattle, Washington 98122, United States
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8
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Rullo A, Beharry AA, Gómez-Biagi RF, Zhao X, Nitz M. Site-Selective Affinity Labelling of Maltose Binding Protein in Bacterial Cells. Chembiochem 2012; 13:783-7. [DOI: 10.1002/cbic.201200046] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2012] [Indexed: 12/18/2022]
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9
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Chibba A, Poloczek J, Little DJ, Howell PL, Nitz M. Synthesis and evaluation of inhibitors of E. coli PgaB, a polysaccharide de-N-acetylase involved in biofilm formation. Org Biomol Chem 2012; 10:7103-7. [DOI: 10.1039/c2ob26105g] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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10
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Synthesis and biological evaluation of RON-neoglycosides as tumor cytotoxins. Carbohydr Res 2011; 346:2663-76. [DOI: 10.1016/j.carres.2011.09.019] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2011] [Revised: 09/13/2011] [Accepted: 09/19/2011] [Indexed: 11/21/2022]
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Mass Spectrometric Characterization of Oligo- and Polysaccharides and Their Derivatives. MASS SPECTROMETRY OF POLYMERS – NEW TECHNIQUES 2011. [DOI: 10.1007/12_2011_134] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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12
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Labeling of oligosaccharides for quantitative mass spectrometry. Carbohydr Res 2011; 346:68-75. [DOI: 10.1016/j.carres.2010.11.001] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2010] [Revised: 10/26/2010] [Accepted: 11/01/2010] [Indexed: 11/21/2022]
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13
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Stability studies of hydrazide and hydroxylamine-based glycoconjugates in aqueous solution. Carbohydr Res 2009; 344:278-84. [DOI: 10.1016/j.carres.2008.11.007] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2008] [Revised: 11/04/2008] [Accepted: 11/10/2008] [Indexed: 11/18/2022]
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