1
|
Liu XR, Cui PF, García-Rodeja Y, Solà M, Jin GX. Formation and reactivity of a unique M⋯C-H interaction stabilized by carborane cages. Chem Sci 2024; 15:9274-9280. [PMID: 38903214 PMCID: PMC11186334 DOI: 10.1039/d4sc01158a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Accepted: 05/16/2024] [Indexed: 06/22/2024] Open
Abstract
Broadening carborane applications has consistently been the goal of chemists in this field. Herein, compared to alkyl or aryl groups, a carborane cage demonstrates an advantage in stabilizing a unique bonding interaction: M⋯C-H interaction. Experimental results and theoretical calculations have revealed the characteristic of this two-center, two-electron bonding interaction, in which the carbon atom in the arene ring provides two electrons to the metal center. The reduced aromaticity of the benzene moiety, long distance between the metal and carbon atom in arene, and the upfield shift of the signal of M⋯C-H in the nuclear magnetic resonance spectrum distinguished this interaction from metal⋯C π interaction and metal-C(H) σ bonds. Control experiments demonstrate the unique electronic effects of carborane in stabilizing the M⋯C-H bonding interaction in organometallic chemistry. Furthermore, the M⋯C-H interaction can convert into C-H bond metallization under acidic conditions or via treatment with t-butyl isocyanide. These findings deepen our understanding regarding the interactions between metal centers and carbon atoms and provide new opportunities for the use of carboranes.
Collapse
Affiliation(s)
- Xin-Ran Liu
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University 2005 Songhu Road Shanghai 200433 P. R. China
| | - Peng-Fei Cui
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University 2005 Songhu Road Shanghai 200433 P. R. China
| | - Yago García-Rodeja
- Institut de Química Computacional i Catàlisi, Departament de Química, Universitat de Girona C/Maria Aurèlia Capmany, 69 17003 Girona Spain
| | - Miquel Solà
- Institut de Química Computacional i Catàlisi, Departament de Química, Universitat de Girona C/Maria Aurèlia Capmany, 69 17003 Girona Spain
| | - Guo-Xin Jin
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University 2005 Songhu Road Shanghai 200433 P. R. China
| |
Collapse
|
2
|
Liang G, Zhang M. Insights into the Fluxional Processes of Monomethylcyclohexenyl Manganese Tricarbonyl. Molecules 2023; 28:molecules28073232. [PMID: 37049994 PMCID: PMC10096699 DOI: 10.3390/molecules28073232] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Revised: 04/02/2023] [Accepted: 04/03/2023] [Indexed: 04/14/2023] Open
Abstract
Multiple fluxional processes of 6-monomethylcyclohexenylmanganese tricarbonyl [(6-MeC6H8)Mn(CO)3, complex 1] and 5-monomethylcyclohexenylmanganese tricarbonyl [(5-MeC6H8)Mn(CO)3, complex 2] have been explored using density functional theory (DFT) computations. The contributions of four agostomers-1, 2, 3, and 4-to the (MeC6H8)Mn(CO)3 exchange processes were revealed. The computational results demonstrated that the 1, 2-agostic isomerization only occurred via the η4-diene hydride transition state (TS-1-2, 14.0 kcal/mol), which is consistent with the experimentally proposed high-energy exchange process (16.0 kcal/mol). Excellent agreement is observed (R2 = 0.9862) when comparing the computed and experimentally observed variable temperature 1H NMR chemical shifts. With these results, important insights into the role of agostic interaction in the homogeneous catalysis process could be made, especially with regard to transition metal catalyzed C-H activation.
Collapse
Affiliation(s)
- Guangchao Liang
- Academy of Advanced Interdisciplinary Research, Xidian University, Xi'an 710071, China
| | - Min Zhang
- Department of Pharmacy, School of Medicine, Xi'an International University, Xi'an 710077, China
| |
Collapse
|
3
|
Bruckhoff T, Paschai Darian LK, Stein CAM, Ballmann J. [PNP]-Stabilized Niobium(IV) and Tantalum(IV) Complexes: Synthesis and Characterization of an Open-Shell Tantalum Alkylidene. Organometallics 2023. [DOI: 10.1021/acs.organomet.3c00044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/25/2023]
Affiliation(s)
- Tim Bruckhoff
- Anorganisch-Chemisches Institut, Universität Heidelberg, Im Neuenheimer Feld 276, D-69120 Heidelberg, Germany
| | - Leon K. Paschai Darian
- Anorganisch-Chemisches Institut, Universität Heidelberg, Im Neuenheimer Feld 276, D-69120 Heidelberg, Germany
| | - Carolin A. M. Stein
- Anorganisch-Chemisches Institut, Universität Heidelberg, Im Neuenheimer Feld 276, D-69120 Heidelberg, Germany
| | - Joachim Ballmann
- Anorganisch-Chemisches Institut, Universität Heidelberg, Im Neuenheimer Feld 276, D-69120 Heidelberg, Germany
| |
Collapse
|
4
|
García-Rodeja Y, Feixas F, Matito E, Solà M. Three-centre electron sharing indices (3c-ESIs) as a tool to differentiate among (an)agostic interactions and hydrogen bonds in transition metal complexes. Phys Chem Chem Phys 2022; 24:29333-29337. [PMID: 36472153 DOI: 10.1039/d2cp05221k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
The agostic bond plays an important role in chemistry, not only in transition metal chemistry but also in main group chemistry. In some complexes with M⋯H-X (X = C, N) interactions, differentiation among agostic, anagostic, and hydrogen bonds is challenging. Here we propose the use of three-centre electron sharing indices to classify M⋯H-X (X = C, N) interactions.
Collapse
Affiliation(s)
- Yago García-Rodeja
- Institut de Química Computacional i Catàlisi and Departament de Química, Universitat de Girona, Campus Montilivi, 17003 Girona, Catalonia, Spain.
| | - Ferran Feixas
- Institut de Química Computacional i Catàlisi and Departament de Química, Universitat de Girona, Campus Montilivi, 17003 Girona, Catalonia, Spain.
| | - Eduard Matito
- Donostia International Physics Center (DIPC), Donostia, Euskadi, Spain.,Ikerbasque Foundation for Science, 48011 Bilbao, Euskadi, Spain
| | - Miquel Solà
- Institut de Química Computacional i Catàlisi and Departament de Química, Universitat de Girona, Campus Montilivi, 17003 Girona, Catalonia, Spain.
| |
Collapse
|
5
|
Liu S, Xia S, Yue D, Sun H, Hirao H. The Bonding Nature of Fe–CO Complexes in Heme Proteins. Inorg Chem 2022; 61:17494-17504. [DOI: 10.1021/acs.inorgchem.2c02387] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Shuyang Liu
- Warshel Institute for Computational Biology, School of Life and Health Sciences, School of Medicine, The Chinese University of Hong Kong, Shenzhen, Guangdong518172, P. R. China
| | - Songyan Xia
- Warshel Institute for Computational Biology, School of Life and Health Sciences, School of Medicine, The Chinese University of Hong Kong, Shenzhen, Guangdong518172, P. R. China
| | - Dongxiao Yue
- Warshel Institute for Computational Biology, School of Life and Health Sciences, School of Medicine, The Chinese University of Hong Kong, Shenzhen, Guangdong518172, P. R. China
| | - Haoran Sun
- Warshel Institute for Computational Biology, School of Life and Health Sciences, School of Medicine, The Chinese University of Hong Kong, Shenzhen, Guangdong518172, P. R. China
| | - Hajime Hirao
- Warshel Institute for Computational Biology, School of Life and Health Sciences, School of Medicine, The Chinese University of Hong Kong, Shenzhen, Guangdong518172, P. R. China
| |
Collapse
|
6
|
Lin X, Tian W, Wu W, Mo Y. Evidence for π CHR→d M bonding in transition metal carbene compounds (L nMCHR) and its decisive role in the α-agostic effect. Phys Chem Chem Phys 2022; 24:23420-23426. [PMID: 36128880 DOI: 10.1039/d2cp03870f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
It has been generally recognized that the α-agostic interaction (M⋯H-C) in transition metal carbene compounds LnMCHR (R = H, Me etc.) can be interpreted with a double metal-carbon bonding model. This bonding model involves the reorganization of the σ component, which can be illustrated in terms of three-center two-electron (3c-2e) M-H-C covalent bond as in transition metal alkyl compounds. Herein, we propose an alternative partial triple metal-carbon bonding model to elucidate the agostic interaction in LnMCHR. Apart from the well-defined σ and π bonds, there exists a seemingly weak but decisive third force, namely the πCHR→dM bonding between an occupied π-like symmetric CHR orbital and a vacant metal d orbital, which is the true origin of the α-agostic effect. This partial triple bonding model is authenticated on both Fischer- and Schrock-type carbenes by an ab initio valence bond (VB) method or the block-localized wavefunction (BLW) method, which has the capability to quantify this notable π bonding and further demonstrate its geometric, energetic and spectral impacts on agostic transition metal carbene compounds. We also show that ancillary ligands can modulate the πCHR→dM bonding through electronic and steric effects.
Collapse
Affiliation(s)
- Xuhui Lin
- School of Life Science and Engineering, Southwest Jiaotong University, Chengdu, Sichuan 610031, China.
| | - Weiqin Tian
- School of Life Science and Engineering, Southwest Jiaotong University, Chengdu, Sichuan 610031, China.
| | - Wei Wu
- The State Key Laboratory of Physical Chemistry of Solid Surfaces, iChEM, Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, Fujian 361005, China.
| | - Yirong Mo
- Department of Nanoscience, Joint School of Nanoscience and Nanoengineering, University of North Carolina at Greensboro, Greensboro, NC 27401, USA.
| |
Collapse
|
7
|
Liu S, Hirao H. Energy Decomposition Analysis of the Nature of Coordination Bonding at the Heme Iron Center in Cytochrome P450 Inhibition. Chem Asian J 2022; 17:e202200360. [PMID: 35514038 DOI: 10.1002/asia.202200360] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Revised: 04/26/2022] [Indexed: 11/11/2022]
Abstract
Drug compounds or their metabolic intermediates (MIs) sometimes inhibit the function of cytochrome P450 enzymes (P450s) by forming a coordination bond with the Fe(III) heme or Fe(II) heme of P450s. Such inhibition is one of the major causes of drug-drug interactions (DDIs), a subject of longstanding academic and practical interest. However, such coordination bonding is not fully understood at the quantum mechanical level, thus hampering rational improvement of the accuracy of DDI-related predictions. In this work, we employed density functional theory (DFT) and the generalized Kohn-Sham energy decomposition analysis (GKS-EDA) scheme to investigate the nature of the coordination bonding formed in the reversible and quasi-irreversible inhibition of P450s. The GKS-EDA results highlighted a previously unrecognized role of the electron correlation effect in P450 inhibition. The correlation effect tends to be larger in Fe(II) complexes of MI-type inhibitors and is particularly prominent for the nitrosoalkane ligand. An additional natural bond orbital (NBO) analysis provided insight into the relative significance of the σ donation and π backdonation effects in various heme-inhibitor complexes.
Collapse
Affiliation(s)
- Shuyang Liu
- The Chinese University of Hong Kong - Shenzhen, School of Life and Health Sciences, CHINA
| | - Hajime Hirao
- The Chinese University of Hong Kong - Shenzhen, School of Life and Health Sciences, …, Shenzhen, CHINA
| |
Collapse
|
8
|
Fazlur-Rahman A, Bennett MA. Activation of Carbon-Carbon bonds in d9 (Co, Rh, Ir) and d8 (Ru) Metal Coordinated Bicyclo[3.2.1]octa-2,6-diene via agostic M-H-C and M-H Interactions. J Organomet Chem 2022. [DOI: 10.1016/j.jorganchem.2022.122349] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
|
9
|
Maley SM, Steagall R, Lief GR, Buck RM, Yang Q, Sydora OL, Bischof SM, Ess DH. Computational Evaluation and Design of Polyethylene Zirconocene Catalysts with Noncovalent Dispersion Interactions. Organometallics 2022. [DOI: 10.1021/acs.organomet.1c00670] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Steven M. Maley
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, Utah 84602, United States
| | - Robert Steagall
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, Utah 84602, United States
| | - Graham R. Lief
- Research and Technology, Chevron Phillips Chemical Company LP, Highways 60 & 123, Bartlesville, Oklahoma 74003, United States
| | - Richard M. Buck
- Research and Technology, Chevron Phillips Chemical Company LP, Highways 60 & 123, Bartlesville, Oklahoma 74003, United States
| | - Qing Yang
- Research and Technology, Chevron Phillips Chemical Company LP, Highways 60 & 123, Bartlesville, Oklahoma 74003, United States
| | - Orson L. Sydora
- Research and Technology, Chevron Phillips Chemical Company LP, 1862, Kingwood Drive, Kingwood, Texas 77339, United States
| | - Steven M. Bischof
- Research and Technology, Chevron Phillips Chemical Company LP, 1862, Kingwood Drive, Kingwood, Texas 77339, United States
| | - Daniel H. Ess
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, Utah 84602, United States
| |
Collapse
|
10
|
Eisenstein O. From the Felkin‐Anh Rule to the Grignard Reaction: an Almost Circular 50 Year Adventure in the World of Molecular Structures and Reaction Mechanisms with Computational Chemistry**. Isr J Chem 2022. [DOI: 10.1002/ijch.202100138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Odile Eisenstein
- ICGM, Univ. Montpellier, CNRS, ENSCM, Montpellier, 34095 France Department of Chemistry and Hylleraas Centre for Quantum Molecular Sciences University of Oslo Oslo 0315 Norway
| |
Collapse
|
11
|
Lin X, Mo Y. Partial Double Metal-Carbon Bonding Model in Transition Metal Methyl Compounds. Inorg Chem 2022; 61:2892-2902. [PMID: 35104122 DOI: 10.1021/acs.inorgchem.1c03619] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The chemical bond between a transition metal and a methyl group (M-CH3) is typically defined as a single covalent bond, which is of fundamental significance and general interest in understanding the structural properties and reactivity of transition metal alkyl compounds. Herein, we demonstrate that the M-CH3 bonding involves varying σ and π components and thus should be best described in terms of the partial double M═CH3 bond. The often-neglected π bonding stems from an occupied π-symmetric orbital of the methyl group comprising all three C-H σ bonds (but one C-H' contributes more than the other two) and a vacant low-lying metal d(π) orbital, and is associated with the intramolecular C-H'···M agostic effect (i.e., an acute M-C-H' angle and a short H'···M distance), whose origin is still controversial. We quantify the geometric and energetic impacts of the π interaction involved in the M-CH3 bond by explicitly computing the intramolecular πCH' → dM interaction with the ab initio valence bond (VB) theory. Our computations of the ligand-free [TiCH3]3+ and a series of metallocene catalysts provide a direct proof for the presence of the π bonding in M-CH3 bonds, which is the cause for the agostic effect. The partial double M═CH3 bonding model is not only validated by a range of bonding analyses including VB self-consistent field (VBSCF)-based energy decomposition and quantum theory of atoms in molecules (QTAIM) but also authenticated by the specific activity of double M═CH3 bonds in the C-H activation and olefin insertion. More importantly, the σ bond gradually switches from a classical covalent bond to a novel charge-shift bond with the π bonding becoming increasingly significant. We anticipate that the recognition of the π interaction between electrophilic metal centers and C-H bonds can benefit the understanding of the nature of metal-carbon bonds in transition metal ethyl, alkyl, and carbene compounds.
Collapse
Affiliation(s)
- Xuhui Lin
- Sichuan Engineering Research Center for Biomimetic Synthesis of Natural Drugs, School of Life Science and Engineering, Southwest Jiaotong University, Chengdu 610031, China
| | - Yirong Mo
- Department of Nanoscience, Joint School of Nanoscience and Nanoengineering, University of North Carolina at Greensboro, Greensboro, North Carolina 27401, United States
| |
Collapse
|
12
|
Narayana MA, Vaddamanu M, Sathyanarayana A, Siddhant K, Sugiyama S, Ozaki K, Rengan AK, Velappan K, Hisano K, Tsutsumi O, Prabusankar G. A gold(I) 1,2,3-triazolylidene complex featuring the interaction between gold and methine hydrogen. Dalton Trans 2021; 50:16514-16518. [PMID: 34761758 DOI: 10.1039/d1dt02827h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
A mesoionic N-heterocyclic carbene-gold(I) complex with a unique Au⋯H-C(methine) intramolecular hydrogen bonding interaction has been investigated in the solid state. The structure of this new neutral gold(I)-carbene was characterized by FT-IR and NMR spectroscopy, TGA, and X-ray diffraction techniques. Density functional theory (DFT) and atoms-in-molecule (AIM) analysis revealed that the gold-hydrogen bonding situation is more favored. Besides, the photophysical properties of the gold(I) complex were also investigated.
Collapse
Affiliation(s)
- Mannem Adi Narayana
- Department of Chemistry, Indian Institute of Technology Hyderabad, India-502 284.
| | - Moulali Vaddamanu
- Department of Chemistry, Indian Institute of Technology Hyderabad, India-502 284.
| | | | - Kumar Siddhant
- Department of Applied Chemistry, Ritsumeikan University, Kusatsu 525-8577, Japan.
| | - Shohei Sugiyama
- Department of Applied Chemistry, Ritsumeikan University, Kusatsu 525-8577, Japan.
| | - Kazuhisa Ozaki
- Department of Applied Chemistry, Ritsumeikan University, Kusatsu 525-8577, Japan.
| | - Aravind Kumar Rengan
- Department of Biomedical Engineering, Indian Institute of Technology Hyderabad, India-502 284
| | - Kavitha Velappan
- DAV-IITH, Indian Institute of Technology Hyderabad, India-502 284
| | - Kyohei Hisano
- Department of Applied Chemistry, Ritsumeikan University, Kusatsu 525-8577, Japan.
| | - Osamu Tsutsumi
- Department of Applied Chemistry, Ritsumeikan University, Kusatsu 525-8577, Japan.
| | - Ganesan Prabusankar
- Department of Chemistry, Indian Institute of Technology Hyderabad, India-502 284.
| |
Collapse
|
13
|
Ardiles CS, Rodríguez CC. Theoretical study for determining the type of interactions between a GG block of an alginate chain with metals Cu2+, Mn2+, Ca2+ and Mg2+. ARAB J CHEM 2021. [DOI: 10.1016/j.arabjc.2021.103325] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
|
14
|
González‐Montiel S, Ignacio Sandoval‐Chávez C, Castillo‐Moreno MÁ, Mendoza‐Espinosa D, Manuel Vásquez‐Pérez J, Cruz‐Borbolla J, Salazar‐Pereda V. Coordination from Heteroscorpionate Ligand Towards Pd(II) via Pd⋅⋅⋅Hδ−C(sp3) Interaction: Structural and Catalytic Studies. Eur J Inorg Chem 2021. [DOI: 10.1002/ejic.202100351] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Simplicio González‐Montiel
- Área Académica de Química, Centro de Investigaciones Químicas Universidad Autónoma del Estado de Hidalgo km. 14.5 Carretera Pachuca-Tulancingo, Ciudad del Conocimiento C.P. 42184, Mineral de la Reforma Hidalgo México
| | - César Ignacio Sandoval‐Chávez
- CONACYT Research-Fellow, Área Académica de Química, Centro de Investigaciones Químicas Universidad Autónoma del Estado de Hidalgo km. 14.5 Carretera Pachuca-Tulancingo, Ciudad del Conocimiento C. P. 42184, Mineral de la Reforma Hidalgo México
| | - Miguel Ángel Castillo‐Moreno
- Área Académica de Química, Centro de Investigaciones Químicas Universidad Autónoma del Estado de Hidalgo km. 14.5 Carretera Pachuca-Tulancingo, Ciudad del Conocimiento C.P. 42184, Mineral de la Reforma Hidalgo México
| | - Daniel Mendoza‐Espinosa
- Área Académica de Química, Centro de Investigaciones Químicas Universidad Autónoma del Estado de Hidalgo km. 14.5 Carretera Pachuca-Tulancingo, Ciudad del Conocimiento C.P. 42184, Mineral de la Reforma Hidalgo México
| | - José Manuel Vásquez‐Pérez
- CONACYT Research-Fellow, Área Académica de Química, Centro de Investigaciones Químicas Universidad Autónoma del Estado de Hidalgo km. 14.5 Carretera Pachuca-Tulancingo, Ciudad del Conocimiento C. P. 42184, Mineral de la Reforma Hidalgo México
| | - Julián Cruz‐Borbolla
- Área Académica de Química, Centro de Investigaciones Químicas Universidad Autónoma del Estado de Hidalgo km. 14.5 Carretera Pachuca-Tulancingo, Ciudad del Conocimiento C.P. 42184, Mineral de la Reforma Hidalgo México
| | - Verónica Salazar‐Pereda
- Área Académica de Química, Centro de Investigaciones Químicas Universidad Autónoma del Estado de Hidalgo km. 14.5 Carretera Pachuca-Tulancingo, Ciudad del Conocimiento C.P. 42184, Mineral de la Reforma Hidalgo México
| |
Collapse
|
15
|
Stewart AWE, Ma HZ, Weragoda GK, Khairallah GN, Canty AJ, O’Hair RAJ. Dissecting Transmetalation Reactions at the Molecular Level: Role of the Coordinated Anion in Gas-Phase Models for the Transmetalation Step of the Hiyama Cross-Coupling Reaction. Organometallics 2021. [DOI: 10.1021/acs.organomet.0c00795] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Adam W. E. Stewart
- School of Chemistry and Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, 30 Flemington Rd, Parkville, Victoria 3010, Australia
| | - Howard Z. Ma
- School of Chemistry and Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, 30 Flemington Rd, Parkville, Victoria 3010, Australia
| | - Geethika K. Weragoda
- School of Chemistry and Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, 30 Flemington Rd, Parkville, Victoria 3010, Australia
| | - George N. Khairallah
- School of Chemistry and Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, 30 Flemington Rd, Parkville, Victoria 3010, Australia
- Accurate Mass Scientific P/L, P.O. Box 92, Keilor, Victoria 3036, Australia
| | - Allan J. Canty
- School of Natural Sciences − Chemistry, University of Tasmania, Private Bag 75, Hobart, Tasmania 7001, Australia
| | - Richard A. J. O’Hair
- School of Chemistry and Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, 30 Flemington Rd, Parkville, Victoria 3010, Australia
| |
Collapse
|
16
|
Mahmoudi G, Babashkina MG, Maniukiewicz W, Afkhami FA, Nunna BB, Zubkov FI, Ptaszek AL, Szczepanik DW, Mitoraj MP, Safin DA. Solvent-Induced Formation of Novel Ni(II) Complexes Derived from Bis-Thiosemicarbazone Ligand: An Insight from Experimental and Theoretical Investigations. Int J Mol Sci 2021; 22:ijms22105337. [PMID: 34069455 PMCID: PMC8159110 DOI: 10.3390/ijms22105337] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Revised: 05/03/2021] [Accepted: 05/10/2021] [Indexed: 11/16/2022] Open
Abstract
In this work, we report solvent-induced complexation properties of a new N2S2 tetradentate bis-thiosemicarbazone ligand (H2LI), prepared by the condensation of 4-phenylthiosemicarbazide with bis-aldehyde, namely 2,2'-(ethane-1,2-diylbis(oxy)dibenzaldehyde, towards nickel(II). Using ethanol as a reaction medium allowed the isolation of a discrete mononuclear homoleptic complex [NiLI] (1), for which its crystal structure contains three independent molecules, namely 1-I, 1-II, and 1-III, in the asymmetric unit. The doubly deprotonated ligand LI in the structure of 1 is coordinated in a cis-manner through the azomethine nitrogen atoms and the thiocarbonyl sulfur atoms. The coordination geometry around metal centers in all the three crystallographically independent molecules of 1 is best described as the seesaw structure. Interestingly, using methanol as a reaction medium in the same synthesis allowed for the isolation of a discrete mononuclear homoleptic complex [Ni(LII)2] (2), where LII is a monodeprotonated ligand 2-(2-(2-(2-(dimethoxymethyl)phenoxy)ethoxy)benzylidene)-N-phenylhydrazine-1-carbothioamide (HLII). The ligand LII was formed in situ from the reaction of LI with methanol upon coordination to the metal center under synthetic conditions. In the structure of 2, two ligands LII are coordinated in a trans-manner through the azomethine nitrogen atom and the thiocarbonyl sulfur atom, also yielding a seesaw coordination geometry around the metal center. The charge and energy decomposition scheme ETS-NOCV allows for the conclusion that both structures are stabilized by a bunch of London dispersion-driven intermolecular interactions, including predominantly N-H∙∙∙S and N-H∙∙∙O hydrogen bonds in 1 and 2, respectively; they are further augmented by less typical C-H∙∙∙X (where X = S, N, O, π), CH∙∙∙HC, π∙∙∙π stacking and the most striking, attractive long-range intermolecular C-H∙∙∙Ni preagostic interactions. The latter are found to be determined by both stabilizing Coulomb forces and an exchange-correlation contribution as revealed by the IQA energy decomposition scheme. Interestingly, the analogous long-range C-H∙∙∙S interactions are characterized by a repulsive Coulomb contribution and the prevailing attractive exchange-correlation constituent. The electron density of the delocalized bonds (EDDB) method shows that the nickel(II) atom shares only ~0.8|e| due to the σ-conjugation with the adjacent in-plane atoms, demonstrating a very weak σ-metalloaromatic character.
Collapse
Affiliation(s)
- Ghodrat Mahmoudi
- Department of Chemistry, Faculty of Science, University of Maragheh, Maragheh P.O. Box 55181-83111, Iran
- Correspondence: (G.M.); (W.M.); (M.P.M.); (D.A.S.)
| | | | - Waldemar Maniukiewicz
- Institute of General and Ecological Chemistry, Lodz University of Technology, Żeromskiego 116, 90-924 Łódź, Poland
- Correspondence: (G.M.); (W.M.); (M.P.M.); (D.A.S.)
| | - Farhad Akbari Afkhami
- Department of Chemistry, The University of Alabama, Box 870336, 250 Hackberry Lane, Tuscaloosa, AL 35487, USA;
| | - Bharath Babu Nunna
- Department of Mechanical and Industrial Engineering, New Jersey Institute of Technology, University Heights, Newark, NJ 07102, USA;
- Department of Medicine, Division of Engineering in Medicine, Brigham and Women’s Hospital, Harvard Medical School, Harvard University, Cambridge, MA 02139, USA
| | - Fedor I. Zubkov
- Organic Chemistry Department, Faculty of Science, Peoples’ Friendship University of Russia (RUDN University), Miklukho-Maklaya Str. 6, 117198 Moscow, Russia;
| | - Aleksandra L. Ptaszek
- Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Cracow, Poland; (A.L.P.); (D.W.S.)
| | - Dariusz W. Szczepanik
- Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Cracow, Poland; (A.L.P.); (D.W.S.)
| | - Mariusz P. Mitoraj
- Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Cracow, Poland; (A.L.P.); (D.W.S.)
- Correspondence: (G.M.); (W.M.); (M.P.M.); (D.A.S.)
| | - Damir A. Safin
- Institute of Chemistry, University of Tyumen, Volodarskogo Str. 6, 625003 Tyumen, Russia
- Innovation Center for Chemical and Pharmaceutical Technologies, Ural Federal University Named after the First President of Russia B.N. Eltsin, Mira Str. 19, 620002 Ekaterinburg, Russia
- Kurgan State University, Sovetskaya Str. 63/4, 640020 Tyumen, Russia
- Correspondence: (G.M.); (W.M.); (M.P.M.); (D.A.S.)
| |
Collapse
|
17
|
Parker K, Weragoda GK, Canty AJ, Ryzhov V, O’Hair RAJ. Modeling Metal-Catalyzed Polyethylene Depolymerization: [(Phen)Pd(X)] + (X = H and CH 3) Catalyze the Decomposition of Hexane into a Mixture of Alkenes via a Complex Reaction Network. Organometallics 2021. [DOI: 10.1021/acs.organomet.0c00782] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Kevin Parker
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois 60115, United States
| | - Geethika K. Weragoda
- School of Chemistry, Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Melbourne, Victoria 3010, Australia
- CSIRO Manufacturing, Research Way, Clayton, Victoria 3168, Australia
| | - Allan J. Canty
- School of Natural Sciences-Chemistry, University of Tasmania, Private Bag 75, Hobart, Tasmania 7001, Australia
| | - Victor Ryzhov
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois 60115, United States
| | - Richard A. J. O’Hair
- School of Chemistry, Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Melbourne, Victoria 3010, Australia
| |
Collapse
|
18
|
Brzozowska M, Handzlik G, Kurpiewska K, Zychowicz M, Pinkowicz D. Pseudo-tetrahedral vs. pseudo-octahedral Er III single molecule magnets and the disruptive role of coordinated TEMPO radical. Inorg Chem Front 2021. [DOI: 10.1039/d1qi00262g] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Tetrahedral ErIII complexes are potential candidates for high-performance single molecule magnets (SMMs).
Collapse
Affiliation(s)
| | | | | | | | - Dawid Pinkowicz
- Jagiellonian University
- Faculty of Chemistry
- 30-387 Kraków
- Poland
| |
Collapse
|
19
|
Lin X, Mo Y. Resonance-Assisted but Antielectrostatic Intramolecular Au···H–O Hydrogen Bonding in Gold(I) Complexes: A Computational Verification. Inorg Chem 2020; 60:460-467. [DOI: 10.1021/acs.inorgchem.0c03252] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xuhui Lin
- School of Life Science and Engineering, Southwest Jiaotong University, Chengdu, Sichuan 610031, China
| | - Yirong Mo
- Department of Nanoscience, Joint School of Nanoscience and Nanoengineering, University of North Carolina at Greensboro, Greensboro, North Carolina 27401, United States
| |
Collapse
|
20
|
Parker K, Weragoda GK, Canty AJ, Polyzos A, Ryzhov V, O’Hair RAJ. A Two-Step Catalytic Cycle for the Acceptorless Dehydrogenation of Ethane by Group 10 Metal Complexes: Role of the Metal in Reactivity and Selectivity. Organometallics 2020. [DOI: 10.1021/acs.organomet.0c00598] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Kevin Parker
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois 60115, United States
| | - Geethika K. Weragoda
- School of Chemistry, Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Melbourne, Victoria 3010, Australia
- CSIRO Manufacturing, Research Way, Clayton, Victoria 3168, Australia
| | - Allan J. Canty
- School of Natural Sciences-Chemistry, University of Tasmania, Private Bag 75, Hobart, Tasmania 7001, Australia
| | - Anastasios Polyzos
- CSIRO Manufacturing, Research Way, Clayton, Victoria 3168, Australia
- School of Chemistry, The University of Melbourne, Melbourne, Victoria 3010, Australia
| | - Victor Ryzhov
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois 60115, United States
| | - Richard A. J. O’Hair
- School of Chemistry, Bio21 Institute of Molecular Science and Biotechnology, The University of Melbourne, Melbourne, Victoria 3010, Australia
| |
Collapse
|
21
|
Holtrop F, Visscher KW, Jupp AR, Slootweg JC. Steric attraction: A force to be reckoned with. ADVANCES IN PHYSICAL ORGANIC CHEMISTRY 2020. [DOI: 10.1016/bs.apoc.2020.08.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
|