1
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Cao W, Huang C, Zhou X, Zhou S, Deng Y. Engineering two-component systems for advanced biosensing: From architecture to applications in biotechnology. Biotechnol Adv 2024; 75:108404. [PMID: 39002783 DOI: 10.1016/j.biotechadv.2024.108404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Revised: 06/05/2024] [Accepted: 07/07/2024] [Indexed: 07/15/2024]
Abstract
Two-component systems (TCSs) are prevalent signaling pathways in bacteria. These systems mediate phosphotransfer between histidine kinase and a response regulator, facilitating responses to diverse physical, chemical, and biological stimuli. Advancements in synthetic and structural biology have repurposed TCSs for applications in monitoring heavy metals, disease-associated biomarkers, and the production of bioproducts. However, the utility of many TCS biosensors is hindered by undesired performance due to the lack of effective engineering methods. Here, we briefly discuss the architectures and regulatory mechanisms of TCSs. We also summarize the recent advancements in TCS engineering by experimental or computational-based methods to fine-tune the biosensor functional parameters, such as response curve and specificity. Engineered TCSs have great potential in the medical, environmental, and biorefinery fields, demonstrating a crucial role in a wide area of biotechnology.
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Affiliation(s)
- Wenyan Cao
- School of Biotechnology and Key Laboratory of Industrial Biotechnology of Ministry of Education, Jiangnan University, Wuxi 214122, China
| | - Chao Huang
- School of Biotechnology and Key Laboratory of Industrial Biotechnology of Ministry of Education, Jiangnan University, Wuxi 214122, China
| | - Xuan Zhou
- School of Biotechnology and Key Laboratory of Industrial Biotechnology of Ministry of Education, Jiangnan University, Wuxi 214122, China
| | - Shenghu Zhou
- School of Biotechnology and Key Laboratory of Industrial Biotechnology of Ministry of Education, Jiangnan University, Wuxi 214122, China.
| | - Yu Deng
- School of Biotechnology and Key Laboratory of Industrial Biotechnology of Ministry of Education, Jiangnan University, Wuxi 214122, China.
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2
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Yuan S. Indirect detection of lead(II), cadmium(II) and mercury(II) on a microfluidic electrophoresis chip. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2024. [PMID: 39263759 DOI: 10.1039/d4ay01174k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/13/2024]
Abstract
Water environments contaminated by heavy metal ions present significant challenges because these pollutants do not degrade naturally, leading to their gradual bioaccumulation in animals and plants, which ultimately poses an insurmountable threat to human health. Therefore, rapid and accurate detection of heavy metal ions in water is of great significance for environmental protection and disease prevention. In this work, we developed a novel method based on microfluidic electrophoresis coupled with indirect chemiluminescence for the immediate detection of Cd(II), Pb(II) and Hg(II) heavy metal ions. The displacement of the Co(II) ions within the chemiluminescence mixture by the above migrating sample cations caused a measurable reduction in the background signal. The results showed that the detection limits of Cd(II), Pb(II) and Hg(II) ions under the best detection conditions were 5.83 × 10-8 M, 5.38 × 10-8 M and 2.09 × 10-8 M, respectively, which were 1-2 orders of magnitude lower than those of the indirect UV method and 1 order of magnitude lower than that of the indirect laser induced detection method. This method can provide a possibility for the rapid detection of multiple heavy metal ions in actual water environments.
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Affiliation(s)
- Shuai Yuan
- School of Health and Life Sciences, University of Health and Rehabilitation Sciences, Qingdao, Shandong 266113, China.
- College of Mechanical and Electrical Engineering, Central South University, Changsha, Hunan 410083, China
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3
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Dutta B, Datta S, Mir MH. Photoresponsive metal-organic framework materials for advance applications. Chem Commun (Camb) 2024; 60:9149-9162. [PMID: 39104303 DOI: 10.1039/d4cc02093f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/07/2024]
Abstract
The interaction between light and materials produces a range of phenomena within molecular systems, leading to advanced applications in the field of materials science. In this regard, metal-organic framework (MOF) materials have become superior candidates to others because of their easy tailor-made synthetic methods via incorporation of photoactive moieties into their structural assembly. Photoresponsive MOFs exhibit a massive variety of exciting properties, including photochromism, photomagnetism, photoluminescence, photon up or down conversion, photoconductivity, nonlinear optical properties, photosalient effects and photoinduced switching of conformations. These photoresponsive properties of MOFs regulate different potential applications, such as on-demand gas sorption and separation, optical sensing, fabrication of photoactuators and photosensing electronic devices, dye degradation, catalysis, cargo delivery, ink-free erasable printing, bio-imaging and drug delivery in biological systems. Therefore, judicious crystal engineering along with an understanding of their structure-property relationship will lead to the fabrication of desired photosensitive MOFs. Herein, we attempted to incorporate categorical descriptions based on advanced applications of photoresponsive MOFs considering a wide range of recent publications.
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Affiliation(s)
- Basudeb Dutta
- Department of Chemistry, Aliah University, New Town, Kolkata 700 160, India.
- Institute for Integrated Cell-Material Sciences, Kyoto University, Kyoto 606-8501, Japan
| | - Sourav Datta
- Department of Chemistry, Aliah University, New Town, Kolkata 700 160, India.
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4
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Geiwitz M, Page OR, Marello T, Nichols ME, Kumar N, Hummel S, Belosevich V, Ma Q, van Opijnen T, Batten B, Meyer MM, Burch KS. Graphene Multiplexed Sensor for Point-of-Need Viral Wastewater-Based Epidemiology. ACS APPLIED BIO MATERIALS 2024; 7:4622-4632. [PMID: 38954405 DOI: 10.1021/acsabm.4c00484] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/04/2024]
Abstract
Wastewater-based epidemiology (WBE) can help mitigate the spread of respiratory infections through the early detection of viruses, pathogens, and other biomarkers in human waste. The need for sample collection, shipping, and testing facilities drives up the cost of WBE and hinders its use for rapid detection and isolation in environments with small populations and in low-resource settings. Given the ubiquitousness and regular outbreaks of respiratory syncytial virus, SARS-CoV-2, and various influenza strains, there is a rising need for a low-cost and easy-to-use biosensing platform to detect these viruses locally before outbreaks can occur and monitor their progression. To this end, we have developed an easy-to-use, cost-effective, multiplexed platform able to detect viral loads in wastewater with several orders of magnitude lower limit of detection than that of mass spectrometry. This is enabled by wafer-scale production and aptamers preattached with linker molecules, producing 44 chips at once. Each chip can simultaneously detect four target analytes using 20 transistors segregated into four sets of five for each analyte to allow for immediate statistical analysis. We show our platform's ability to rapidly detect three virus proteins (SARS-CoV-2, RSV, and Influenza A) and a population normalization molecule (caffeine) in wastewater. Going forward, turning these devices into hand-held systems would enable wastewater epidemiology in low-resource settings and be instrumental for rapid, local outbreak prevention.
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Affiliation(s)
- Michael Geiwitz
- Department of Physics, Boston College, Chestnut Hill, Massachusetts 02467, United States
| | - Owen Rivers Page
- Department of Biology, Boston College, Chestnut Hill, Massachusetts 02467, United States
| | - Tio Marello
- Department of Physics, Boston College, Chestnut Hill, Massachusetts 02467, United States
| | - Marina E Nichols
- Department of Physics, Boston College, Chestnut Hill, Massachusetts 02467, United States
| | - Narendra Kumar
- GRIP Molecular Technologies, Inc., 1000 Westgate Drive, Saint Paul, Minnesota 55114, United States
| | - Stephen Hummel
- Department of Chemistry and Life Science, United States Military Academy, West Point, New York 10996, United States
| | - Vsevolod Belosevich
- Department of Physics, Boston College, Chestnut Hill, Massachusetts 02467, United States
| | - Qiong Ma
- Department of Physics, Boston College, Chestnut Hill, Massachusetts 02467, United States
| | - Tim van Opijnen
- Department of Biology, Boston College, Chestnut Hill, Massachusetts 02467, United States
| | - Bruce Batten
- GRIP Molecular Technologies, Inc., 1000 Westgate Drive, Saint Paul, Minnesota 55114, United States
| | - Michelle M Meyer
- Department of Biology, Boston College, Chestnut Hill, Massachusetts 02467, United States
| | - Kenneth S Burch
- Department of Physics, Boston College, Chestnut Hill, Massachusetts 02467, United States
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5
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Singh R, Ryu J, Hyoung Lee W, Kang JH, Park S, Kim K. Wastewater-borne viruses and bacteria, surveillance and biosensors at the interface of academia and field deployment. Crit Rev Biotechnol 2024:1-21. [PMID: 38973015 DOI: 10.1080/07388551.2024.2354709] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Accepted: 04/28/2024] [Indexed: 07/09/2024]
Abstract
Wastewater is a complex, but an ideal, matrix for disease monitoring and surveillance as it represents the entire load of enteric pathogens from a local catchment area. It captures both clinical and community disease burdens. Global interest in wastewater surveillance has been growing rapidly for infectious diseases monitoring and for providing an early warning of potential outbreaks. Although molecular detection methods show high sensitivity and specificity in pathogen monitoring from wastewater, they are strongly limited by challenges, including expensive laboratory settings and prolonged sample processing and analysis. Alternatively, biosensors exhibit a wide range of practical utility in real-time monitoring of biological and chemical markers. However, field deployment of biosensors is primarily challenged by prolonged sample processing and pathogen concentration steps due to complex wastewater matrices. This review summarizes the role of wastewater surveillance and provides an overview of infectious viral and bacterial pathogens with cutting-edge technologies for their detection. It emphasizes the practical utility of biosensors in pathogen monitoring and the major bottlenecks for wastewater surveillance of pathogens, and overcoming approaches to field deployment of biosensors for real-time pathogen detection. Furthermore, the promising potential of novel machine learning algorithms to resolve uncertainties in wastewater data is discussed.
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Affiliation(s)
- Rajendra Singh
- Department of Biological and Environmental Science, Dongguk University, Goyang, Gyeonggi-do, South Korea
| | - Jaewon Ryu
- Department of Biological and Environmental Science, Dongguk University, Goyang, Gyeonggi-do, South Korea
| | - Woo Hyoung Lee
- Department of Civil, Environmental, and Construction Engineering, University of Central FL, Orlando, FL, USA
| | - Joo-Hyon Kang
- Department of Civil and Environmental Engineering, Dongguk University-Seoul, Seoul, South Korea
| | - Sanghwa Park
- Bacteria Research Team, Freshwater Bacteria Research Department, Nakdonggang National Institute of Biological Resources (NNIBR), Sangju-si, South Korea
| | - Keugtae Kim
- Department of Biological and Environmental Science, Dongguk University, Goyang, Gyeonggi-do, South Korea
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6
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Mansouri S. Recent developments of (bio)-sensors for detection of main microbiological and non-biological pollutants in plastic bottled water samples: A critical review. Talanta 2024; 274:125962. [PMID: 38537355 DOI: 10.1016/j.talanta.2024.125962] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2024] [Revised: 02/27/2024] [Accepted: 03/20/2024] [Indexed: 05/04/2024]
Abstract
The importance of water in all biological processes is undeniable. Ensuring access to clean and safe drinking water is crucial for maintaining sustainable water resources. To elaborate, the consumption of water of inadequate quality can have a repercussion on human health. Furthermore, according to the instability of tap water quality, the consumption rate of bottled water is increasing every day at the global level. Although most people believe bottled water is safe, it can also be contaminated by microbiological or chemical pollution, which can increase the risk of disease. Over the last decades, several conventional analytical tools applied to analyze the contamination of bottled water. On the other hand, some limitations restrict their application in this field. Therefore, biosensors, as emerging analytical method, attract tremendous attention for detection both microbial and chemical contamination of bottled water. Biosensors enjoy several facilities including selectivity, affordability, and sensitivity. In this review, the developed biosensors for analyzing contamination of bottled water were highlighted, as along with working strategies, pros and cons of studies. Challenges and prospects were also examined.
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Affiliation(s)
- Sofiene Mansouri
- Department of Biomedical Technology, College of Applied Medical Sciences in Al-Kharj, Prince Sattam bin Abdulaziz University, Al-Kharj, 11942, Saudi Arabia; University of Tunis El Manar, Higher Institute of Medical Technologies of Tunis, Laboratory of Biophysics and Medical Technologies, Tunis, Tunisia.
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7
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Eren S, Türk FN, Arslanoğlu H. Synthesis of zeolite from industrial wastes: a review on characterization and heavy metal and dye removal. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:41791-41823. [PMID: 38861062 PMCID: PMC11219454 DOI: 10.1007/s11356-024-33863-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2024] [Accepted: 05/28/2024] [Indexed: 06/12/2024]
Abstract
Increasing world population, urbanization, and industrialization have led to an increase in demand in production and consumption, resulting in an increase in industrial solid wastes and pollutant levels in water. These two main consequences have become global problems. The high Si and Al content of solid wastes suggests that they can be used as raw materials for the synthesis of zeolites. In this context, when the literature studies conducted to obtain synthetic zeolites are evaluated, it is seen that hydrothermal synthesis method is generally used. In order to improve the performance of the hydrothermal synthesis method in terms of energy cost, synthesis time, and even product quality, additional methods such as alkaline fusion, ultrasonic effect, and microwave support have been developed. The zeolites synthesized by different techniques exhibit superior properties such as high surface area and well-defined pore sizes, thermal stability, high cation exchange capacity, high regeneration ability, and catalytic activity. Due to these specific properties, zeolites are recognized as one of the most effective methods for the removal of pollutants. The toxic properties of heavy metals and dyes in water and their carcinogenic effects in long-term exposure pose a serious risk to living organisms. Therefore, they should be treated at specified levels before discharge to the environment. In this review study, processes including different methods developed for the production of zeolites from industrial solid wastes were evaluated. Studies using synthetic zeolites for the removal of high levels of health and environmental risks such as heavy metals and dyes are reviewed. In addition, EPMA, SEM, EDX, FTIR, BET, AFM, and 29Si and 27Al NMR techniques, which are characterization methods of synthetic zeolites, are presented and the cation exchange capacity, thermodynamics of adsorption, effect of temperature, and pH are investigated. It is expected that energy consumption can be reduced by large-scale applications of alternative techniques developed for zeolite synthesis and their introduction into the industry. It is envisaged that zeolites synthesized by utilizing wastes will be effective in obtaining a green technology. The use of synthesized zeolites in a wide variety of applications, especially in environmental problems, holds great promise.
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Affiliation(s)
- Sena Eren
- Canakkale Onsekiz Mart University, Faculty of Engineering, Department of Chemical Engineering, Çanakkale, Turkey
| | - Feride N Türk
- Çankırı Karatekin University, Central Research Laboratory Application and Research Center, Çankırı, Turkey
| | - Hasan Arslanoğlu
- Canakkale Onsekiz Mart University, Faculty of Engineering, Department of Chemical Engineering, Çanakkale, Turkey.
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8
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Ma BC, Guo Y, Lin YR, Zhang J, Wang XQ, Zhang WQ, Luo JG, Chen YT, Zhang NX, Lu Q, Hui CY. High-throughput screening of human mercury exposure based on a low-cost naked eye-recognized biosensing platform. Biosens Bioelectron 2024; 248:115961. [PMID: 38150800 DOI: 10.1016/j.bios.2023.115961] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2023] [Revised: 12/05/2023] [Accepted: 12/20/2023] [Indexed: 12/29/2023]
Abstract
Whole-cell biosensors could be helpful for in situ disease diagnosis. However, their use in analyzing biological samples has been hindered by unstable responses, low signal enhancement, and growth inhibition in complex media. Here, we offered a solution by building a visual whole-cell biosensor for urinary mercury determination. With deoxyviolacein as the preferred signal for the mercury biosensor for the first time, it enabled the quantitative detection of urinary mercury with a favorable linear range from 1.57 to 100 nM. The biosensor can accurately diagnose urine mercury levels exceeding the biological exposure index with 95.8% accuracy. Thus, our study provided a biosensing platform with great potential to serve as a stable, user-friendly, and high-throughput alternative for the daily monitoring or estimating of urinary mercury.
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Affiliation(s)
- Bing-Chan Ma
- School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, 430030, China; Shenzhen Prevention and Treatment Center for Occupational Diseases, 2019 Buxin Road, Shenzhen, 518020, China
| | - Yan Guo
- Shenzhen Prevention and Treatment Center for Occupational Diseases, 2019 Buxin Road, Shenzhen, 518020, China
| | - Yi-Ran Lin
- Shenzhen Prevention and Treatment Center for Occupational Diseases, 2019 Buxin Road, Shenzhen, 518020, China
| | - Juan Zhang
- Department of Epidemiology and Biostatistics, School of Public Health, Jilin University, 828 Xinmin Street, Changchun, 130021, China
| | - Xiao-Qiang Wang
- Shenzhen Prevention and Treatment Center for Occupational Diseases, 2019 Buxin Road, Shenzhen, 518020, China
| | - Wen-Qi Zhang
- Shenzhen Prevention and Treatment Center for Occupational Diseases, 2019 Buxin Road, Shenzhen, 518020, China
| | - Jin-Gan Luo
- Shenzhen Prevention and Treatment Center for Occupational Diseases, 2019 Buxin Road, Shenzhen, 518020, China
| | - Yu-Ting Chen
- Shenzhen Prevention and Treatment Center for Occupational Diseases, 2019 Buxin Road, Shenzhen, 518020, China
| | - Nai-Xing Zhang
- Shenzhen Prevention and Treatment Center for Occupational Diseases, 2019 Buxin Road, Shenzhen, 518020, China.
| | - Qing Lu
- School of Public Health, Tongji Medical College, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, 430030, China.
| | - Chang-Ye Hui
- Shenzhen Prevention and Treatment Center for Occupational Diseases, 2019 Buxin Road, Shenzhen, 518020, China.
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9
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Purcarea C, Ruginescu R, Banciu RM, Vasilescu A. Extremozyme-Based Biosensors for Environmental Pollution Monitoring: Recent Developments. BIOSENSORS 2024; 14:143. [PMID: 38534250 DOI: 10.3390/bios14030143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Revised: 03/04/2024] [Accepted: 03/12/2024] [Indexed: 03/28/2024]
Abstract
Extremozymes combine high specificity and sensitivity with the ability to withstand extreme operational conditions. This work presents an overview of extremozymes that show potential for environmental monitoring devices and outlines the latest advances in biosensors utilizing these unique molecules. The characteristics of various extremozymes described so far are presented, underlining their stability and operational conditions that make them attractive for biosensing. The biosensor design is discussed based on the detection of photosynthesis-inhibiting herbicides as a case study. Several biosensors for the detection of pesticides, heavy metals, and phenols are presented in more detail to highlight interesting substrate specificity, applications or immobilization methods. Compared to mesophilic enzymes, the integration of extremozymes in biosensors faces additional challenges related to lower availability and high production costs. The use of extremozymes in biosensing does not parallel their success in industrial applications. In recent years, the "collection" of recognition elements was enriched by extremozymes with interesting selectivity and by thermostable chimeras. The perspectives for biosensor development are exciting, considering also the progress in genetic editing for the oriented immobilization of enzymes, efficient folding, and better electron transport. Stability, production costs and immobilization at sensing interfaces must be improved to encourage wider applications of extremozymes in biosensors.
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Affiliation(s)
- Cristina Purcarea
- Department of Microbiology, Institute of Biology Bucharest of the Romanian Academy, 296 Splaiul Independentei, 060031 Bucharest, Romania
| | - Robert Ruginescu
- Department of Microbiology, Institute of Biology Bucharest of the Romanian Academy, 296 Splaiul Independentei, 060031 Bucharest, Romania
| | - Roberta Maria Banciu
- International Centre of Biodynamics, 1B Intrarea Portocalelor, 060101 Bucharest, Romania
- Department of Analytical and Physical Chemistry, University of Bucharest, 4-12 Regina Elisabeta Blvd., 030018 Bucharest, Romania
| | - Alina Vasilescu
- International Centre of Biodynamics, 1B Intrarea Portocalelor, 060101 Bucharest, Romania
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10
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Liu N, Ye W, Zhao G, Liu G. Development of smartphone-controlled and machine-learning-powered integrated equipment for automated detection of bioavailable heavy metals in soils. JOURNAL OF HAZARDOUS MATERIALS 2024; 465:133140. [PMID: 38061131 DOI: 10.1016/j.jhazmat.2023.133140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2023] [Revised: 10/28/2023] [Accepted: 11/28/2023] [Indexed: 02/08/2024]
Abstract
Rapid and accurate on-site detection of crop-absorbable cadmium (Cd) and lead (Pb) in soils is important for food security and human health. The automated soil sample pretreatment method, including the ultrasonic extraction of weakly acid-soluble heavy metals, suction-filtration, and UV photolysis, was proposed to achieve the high-efficiency preparation from soil sample to extract solution. Bismuth-film-modified glass carbon electrode combined with the homemade potentiostat was fabricated to implement the square-wave anodic stripping voltammetry (SWASV) measurements of soil extracts. The peak-information-acquisition algorithm was designed to automatically obtain peak heights and widths of Zn2+, Cd2+, Pb2+, Bi3+, and Cu2+ stripping currents, and then which were used as input variables for establishing machine-learning models to enhance the detection accuracy of SWASV to Cd2+ and Pb2+ under the coexistence of multiple heavy metal ions. Eventually, the smartphone-controlled integrated-automated detection equipment was developed and successfully applied to the automatic pretreatment of soil samples and the determination of weakly acid-soluble Cd2+ and Pb2+ in real soil samples. The detection speed was 75 min/sample, and the detection results were close to the standard method (BCR-ICP-MS). This equipment can provide powerful technical support for on-site rapid and accurate determination of crop-absorbable heavy metals in soils.
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Affiliation(s)
- Ning Liu
- Key Lab of Smart Agriculture Systems, Ministry of Education, China Agricultural University, Beijing 100083, PR China; Key Laboratory of Agricultural Information Acquisition Technology, Ministry of Agriculture and Rural Affairs of China, China Agricultural University, Beijing 100083, PR China.
| | - Wenshuai Ye
- Key Lab of Smart Agriculture Systems, Ministry of Education, China Agricultural University, Beijing 100083, PR China; Key Laboratory of Agricultural Information Acquisition Technology, Ministry of Agriculture and Rural Affairs of China, China Agricultural University, Beijing 100083, PR China
| | - Guo Zhao
- College of Artificial Intelligence, Nanjing Agricultural University, Nanjing 210031, PR China
| | - Gang Liu
- Key Lab of Smart Agriculture Systems, Ministry of Education, China Agricultural University, Beijing 100083, PR China; Key Laboratory of Agricultural Information Acquisition Technology, Ministry of Agriculture and Rural Affairs of China, China Agricultural University, Beijing 100083, PR China.
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11
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Miyagawa A, Oshiyama K, Nagatomo S, Nakatani K. Biosensing of DNA through difference in interaction between microparticle and glass plate based on particle dissociation in a coupled acoustic-gravitational field. Talanta 2024; 268:125369. [PMID: 37918248 DOI: 10.1016/j.talanta.2023.125369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Revised: 10/25/2023] [Accepted: 10/27/2023] [Indexed: 11/04/2023]
Abstract
A novel approach for detecting DNA without labeling the target DNA was developed based on the particle dissociation behavior in a combined acoustic-gravitational field. The particles, which are tethered on a glass plate via intermolecular interactions (Fbind), are dissociated by the resultant force of the acoustic radiation force (Fac), which is a function of the applied voltage (V), and the sedimentation force. In this system, V required for particle dissociation is dependent on Fbind. The differences in Fbind were exploited for detecting the target DNA. A glass plate and polystyrene (PS) particles were respectively modified with anchor and capture DNAs. The target DNA induces immobilization of the PS particles on the glass plate through sandwich hybridization, with a large accompanying Fbind. In the absence of the target DNA, the anchor DNA on the glass plate interacted weakly with the capture DNA on the PS particles via direct binding (small Fbind). The particle dissociation behavior varies based on the concentration of the target DNA due to changes in the ratio of the PS particles tethered through direct binding and sandwich hybridization. Target DNA with a length exceeding 12 base pairs (bps) can be detected on the picomolar scale at concentrations of 10-12 to 10-5 M. This detection scheme was applied to a specific sequence of HIV-2 with 20 bps, achieving a picomolar detection limit.
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Affiliation(s)
- Akihisa Miyagawa
- Department of Chemistry, Faculty of Pure and Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8571, Japan.
| | - Kengo Oshiyama
- Department of Chemistry, Faculty of Pure and Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8571, Japan.
| | - Shigenori Nagatomo
- Department of Chemistry, Faculty of Pure and Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8571, Japan
| | - Kiyoharu Nakatani
- Department of Chemistry, Faculty of Pure and Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8571, Japan
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12
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Yu S, Wang X, Zhang R, Chen R, Ma L. A review on the potential risks and mechanisms of heavy metal exposure to Chronic Obstructive Pulmonary Disease. Biochem Biophys Res Commun 2023; 684:149124. [PMID: 37897914 DOI: 10.1016/j.bbrc.2023.149124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Revised: 10/09/2023] [Accepted: 10/16/2023] [Indexed: 10/30/2023]
Abstract
Chronic Obstructive Pulmonary Disease (COPD) is a chronic disease that affects patients as well as the health and economic stability of society as a whole. At the same time, heavy metal pollution is widely recognized as having a possible impact on the environment and human health. Therefore, these diseases have become important global public health issues. In recent years, researchers have shown great interest in the potential association between heavy metal exposure and the development of COPD, and there has been a substantial increase in the number of related studies. However, we still face the challenge of developing a comprehensive and integrated understanding of this complex association. Therefore, this review aimed to evaluate the existing epidemiological studies to clarify the association between heavy metal exposure and COPD. In addition, we will discuss the biological mechanisms between the two to better understand the multiple molecular pathways and possible mechanisms of action involved, and provide additional insights for the subsequent identification of potential strategies to prevent and control the effects of heavy metal exposure on the development of COPD in individuals and populations.
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Affiliation(s)
- Shuxia Yu
- School of Public Health, Lanzhou University, Lanzhou, 730000, China
| | - Xiaoxia Wang
- School of Public Health, Lanzhou University, Lanzhou, 730000, China
| | - Rongxuan Zhang
- Department of Respiratory, The Second People's Hospital of Lanzhou City, 730030, China
| | - Rentong Chen
- School of Public Health, Lanzhou University, Lanzhou, 730000, China
| | - Li Ma
- School of Public Health, Lanzhou University, Lanzhou, 730000, China.
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Nguyen VCN, Phan HVT, Nguyen VK, Vo DT, Tran TN, Dao MT, Hoang LTTT. A Comparison of a Conventional Chemical Coagulant and a Natural Coagulant Derived from Cassia fistula Seeds for the Removal of Heavy Metal Ions. ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2023; 85:324-331. [PMID: 37249609 DOI: 10.1007/s00244-023-01005-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2022] [Accepted: 05/09/2023] [Indexed: 05/31/2023]
Abstract
Cassia fistula seed-derived coagulant has been reported to exhibit high coagulating-flocculating activity, environmental friendliness, and cost-effectiveness for the wastewater treatment, especially of textile wastewater. For heavy metal removal, however, research focusing on evaluating the feasibility of this material is still limited. Therefore, this study reports jar-test experiments in which the Zn2+ and Ni2+ removal efficiency of C. fistula coagulant was assessed. Moreover, a comparison of coagulation performance using a conventional chemical coagulant and the natural coagulant was performed. Characterization of the C. fistula seed-derived coagulant revealed the presence of important functional groups and fibrous networks with rough surfaces. A bench-scale study indicated that the coagulation performance of the two coagulants depends strongly on the initial concentration of metal ions, pH level, and coagulant dosage. The C. fistula seed-derived coagulant was found to possess higher removal efficiency than polyaluminum chloride. This natural coagulant removed over 80% of metal ions at the optimal conditions of pH 5.0, a metal ion concentration of 25 ppm, and a dosage of 0.8 and 1.6 g/L for Zn2+ and Ni2+, respectively. This study shows that C. fistula seed-derived coagulant is a potential alternative to chemical coagulants and could be developed to provide an environmentally friendly, economical, and efficient wastewater treatment.
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Affiliation(s)
| | - Hoang-Vinh-Truong Phan
- Institute of Fundamental and Applied Sciences, Duy Tan University, Ho Chi Minh City, 700000, Vietnam
- Faculty of Natural Sciences, Duy Tan University, Da Nang, 550000, Vietnam
| | - Van-Kieu Nguyen
- Institute of Fundamental and Applied Sciences, Duy Tan University, Ho Chi Minh City, 700000, Vietnam
- Faculty of Natural Sciences, Duy Tan University, Da Nang, 550000, Vietnam
| | - Duc-Thuong Vo
- Department of Environmental Engineering, Thu Dau Mot University, Thu Dau Mot, Binh Duong, 820000, Vietnam
| | - Thanh-Nha Tran
- Department of Environmental Engineering, Thu Dau Mot University, Thu Dau Mot, Binh Duong, 820000, Vietnam
| | - Minh-Trung Dao
- Department of Environmental Engineering, Thu Dau Mot University, Thu Dau Mot, Binh Duong, 820000, Vietnam.
| | - Le-Thuy-Thuy-Trang Hoang
- Department of Environmental Engineering, Thu Dau Mot University, Thu Dau Mot, Binh Duong, 820000, Vietnam.
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14
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Ma Z, Hu L. MicroRNA: A Dynamic Player from Signalling to Abiotic Tolerance in Plants. Int J Mol Sci 2023; 24:11364. [PMID: 37511124 PMCID: PMC10379455 DOI: 10.3390/ijms241411364] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2023] [Revised: 07/06/2023] [Accepted: 07/11/2023] [Indexed: 07/30/2023] Open
Abstract
MicroRNAs (miRNAs) are a class of non-coding single-stranded RNA molecules composed of approximately 20-24 nucleotides in plants. They play an important regulatory role in plant growth and development and as a signal in abiotic tolerance. Some abiotic stresses include drought, salt, cold, high temperature, heavy metals and nutritional elements. miRNAs affect gene expression by manipulating the cleavage, translational expression or DNA methylation of target messenger RNAs (mRNAs). This review describes the current progress in the field considering two aspects: (i) the way miRNAs are produced and regulated and (ii) the way miRNA/target genes are used in plant responses to various abiotic stresses. Studying the molecular mechanism of action of miRNAs' downstream target genes could optimize the genetic manipulation of crop growth and development conditions to provide a more theoretically optimized basis for improving crop production. MicroRNA is a novel signalling mechanism in interplant communication relating to abiotic tolerance.
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Affiliation(s)
- Ziming Ma
- Jilin Provincial Engineering Laboratory of Plant Genetic Improvement, College of Plant Science, Jilin University, Changchun 130062, China
- Plant Genetics, TUM School of Life Sciences, Technical University of Munich (TUM), Emil Ramann Str. 4, 85354 Freising, Germany
- Max-Planck-Institute of Molecular Plant Physiology, Am Muehlenberg 1, 14476 Potsdam-Golm, Germany
| | - Lanjuan Hu
- Jilin Provincial Engineering Laboratory of Plant Genetic Improvement, College of Plant Science, Jilin University, Changchun 130062, China
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15
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Thai TD, Lim W, Na D. Synthetic bacteria for the detection and bioremediation of heavy metals. Front Bioeng Biotechnol 2023; 11:1178680. [PMID: 37122866 PMCID: PMC10133563 DOI: 10.3389/fbioe.2023.1178680] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Accepted: 04/04/2023] [Indexed: 05/02/2023] Open
Abstract
Toxic heavy metal accumulation is one of anthropogenic environmental pollutions, which poses risks to human health and ecological systems. Conventional heavy metal remediation approaches rely on expensive chemical and physical processes leading to the formation and release of other toxic waste products. Instead, microbial bioremediation has gained interest as a promising and cost-effective alternative to conventional methods, but the genetic complexity of microorganisms and the lack of appropriate genetic engineering technologies have impeded the development of bioremediating microorganisms. Recently, the emerging synthetic biology opened a new avenue for microbial bioremediation research and development by addressing the challenges and providing novel tools for constructing bacteria with enhanced capabilities: rapid detection and degradation of heavy metals while enhanced tolerance to toxic heavy metals. Moreover, synthetic biology also offers new technologies to meet biosafety regulations since genetically modified microorganisms may disrupt natural ecosystems. In this review, we introduce the use of microorganisms developed based on synthetic biology technologies for the detection and detoxification of heavy metals. Additionally, this review explores the technical strategies developed to overcome the biosafety requirements associated with the use of genetically modified microorganisms.
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Affiliation(s)
| | | | - Dokyun Na
- Department of Biomedical Engineering, Chung-Ang University, Seoul, Republic of Korea
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16
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Negut I, Bita B. Polymeric Micellar Systems-A Special Emphasis on "Smart" Drug Delivery. Pharmaceutics 2023; 15:976. [PMID: 36986837 PMCID: PMC10056703 DOI: 10.3390/pharmaceutics15030976] [Citation(s) in RCA: 30] [Impact Index Per Article: 30.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 03/13/2023] [Accepted: 03/15/2023] [Indexed: 03/30/2023] Open
Abstract
Concurrent developments in anticancer nanotechnological treatments have been observed as the burden of cancer increases every year. The 21st century has seen a transformation in the study of medicine thanks to the advancement in the field of material science and nanomedicine. Improved drug delivery systems with proven efficacy and fewer side effects have been made possible. Nanoformulations with varied functions are being created using lipids, polymers, and inorganic and peptide-based nanomedicines. Therefore, thorough knowledge of these intelligent nanomedicines is crucial for developing very promising drug delivery systems. Polymeric micelles are often simple to make and have high solubilization characteristics; as a result, they seem to be a promising alternative to other nanosystems. Even though recent studies have provided an overview of polymeric micelles, here we included a discussion on the "intelligent" drug delivery from these systems. We also summarized the state-of-the-art and the most recent developments of polymeric micellar systems with respect to cancer treatments. Additionally, we gave significant attention to the clinical translation potential of polymeric micellar systems in the treatment of various cancers.
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Affiliation(s)
- Irina Negut
- National Institute for Laser, Plasma and Radiation Physics, 409 Atomistilor Street, Magurele, 077125 Bucharest, Romania
| | - Bogdan Bita
- National Institute for Laser, Plasma and Radiation Physics, 409 Atomistilor Street, Magurele, 077125 Bucharest, Romania
- Faculty of Physics, University of Bucharest, 077125 Măgurele, Romania
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17
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Immobilized Enzyme-based Novel Biosensing System for Recognition of Toxic Elements in the Aqueous Environment. Top Catal 2023. [DOI: 10.1007/s11244-023-01786-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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18
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Ramya M, Senthil Kumar P, Rangasamy G, Uma Shankar V, Rajesh G, Nirmala K, Saravanan A, Krishnapandi A. A recent advancement on the applications of nanomaterials in electrochemical sensors and biosensors. CHEMOSPHERE 2022; 308:136416. [PMID: 36099991 DOI: 10.1016/j.chemosphere.2022.136416] [Citation(s) in RCA: 28] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Revised: 08/28/2022] [Accepted: 09/07/2022] [Indexed: 06/15/2023]
Abstract
Industrialization and globalization, both on an international and local scale, have caused large quantities of toxic chemicals to be released into the environment. Thus, developing an environmental pollutant sensor platform that is sensitive, reliable, and cost-effective is extremely important. In current years, considerable progress has been made in the expansion of electrochemical sensors and biosensors to monitor the environment using nanomaterials. A large number of emerging biomarkers are currently in existence in the biological fluids, clinical, pharmaceutical and bionanomaterial-based electrochemical biosensor platforms have drawn much attention. Electrochemical systems have been used to detect biomarkers rapidly, sensitively, and selectively using biomaterials such as biopolymers, nucleic acids, proteins etc. In this current review, several recent trends have been identified in the growth of electrochemical sensor platforms using nanotechnology such as carbon nanomaterials, metal oxide nanomaterials, metal nanoparticles, biomaterials and polymers. The integration strategies, applications, specific properties and future projections of nanostructured materials for emerging progressive sensor platforms are also observed. The objective of this review is to provide a comprehensive overview of nanoparticles in the field of electrochemical sensors and biosensors.
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Affiliation(s)
- M Ramya
- Department of Chemical Engineering, Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India; Centre of Excellence in Water Research (CEWAR), Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India
| | - P Senthil Kumar
- Department of Chemical Engineering, Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India; Centre of Excellence in Water Research (CEWAR), Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India.
| | - Gayathri Rangasamy
- University Centre for Research and Development & Department of Civil Engineering, Chandigarh University, Gharuan, Mohali, Punjab, 140413, India
| | - V Uma Shankar
- Department of Chemical Engineering, Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India; Centre of Excellence in Water Research (CEWAR), Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India
| | - G Rajesh
- Department of Chemical Engineering, Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India; Centre of Excellence in Water Research (CEWAR), Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India
| | - K Nirmala
- Department of Chemical Engineering, Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India; Centre of Excellence in Water Research (CEWAR), Sri Sivasubramaniya Nadar College of Engineering, Chennai, 603 110, India
| | - A Saravanan
- Department of Sustainable Engineering, Institute of Biotechnology, Saveetha School of Engineering, SIMATS, Chennai, 602105, India
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