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Barthel S, Alexandrov EV, Proserpio DM, Smit B. Distinguishing Metal-Organic Frameworks. CRYSTAL GROWTH & DESIGN 2018; 18:1738-1747. [PMID: 29541002 PMCID: PMC5843951 DOI: 10.1021/acs.cgd.7b01663] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2017] [Revised: 01/18/2018] [Indexed: 05/19/2023]
Abstract
We consider two metal-organic frameworks as identical if they share the same bond network respecting the atom types. An algorithm is presented that decides whether two metal-organic frameworks are the same. It is based on distinguishing structures by comparing a set of descriptors that is obtained from the bond network. We demonstrate our algorithm by analyzing the CoRe MOF database of DFT optimized structures with DDEC partial atomic charges using the program package ToposPro.
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Affiliation(s)
- Senja Barthel
- Laboratory
of Molecular Simulation, Institut des Sciences et Ingénierie
Chimiques, Valais, Ecole Polytechnique Fédérale
de Lausanne (EPFL), Rue
de l’Industrie 17, CH-1951 Sion, Switzerland
| | - Eugeny V. Alexandrov
- Samara
Center for Theoretical Material Science (SCTMS), Samara University, Moskovskoe
shosse 34, 443086 Samara, Russian Federation
- Samara
State Technical University, Molodogvardeyskaya street 244, 443100 Samara, Russian Federation
| | - Davide M. Proserpio
- Samara
Center for Theoretical Material Science (SCTMS), Samara University, Moskovskoe
shosse 34, 443086 Samara, Russian Federation
- Dipartimento
di Chimica, Università degli Studi
di Milano, Via Golgi
19, 20133 Milano, Italy
| | - Berend Smit
- Laboratory
of Molecular Simulation, Institut des Sciences et Ingénierie
Chimiques, Valais, Ecole Polytechnique Fédérale
de Lausanne (EPFL), Rue
de l’Industrie 17, CH-1951 Sion, Switzerland
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Zhai D, Sun W, Fan F, Liao X, Chen S, Yang X. Three coordination polymers constructed from 5-(4-(tetrazol-5-yl)phenyl)isophthalic acid: Synthesis, crystal structure and properties. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.11.073] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Syntheses, Crystal Structures and Magnetic Properties of Co(II) Coordination Polymers Based on a Rigid Imidazole Derivative. J Inorg Organomet Polym Mater 2016. [DOI: 10.1007/s10904-016-0462-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Deng XJ, Yu Q, Bian HD, Ju HD, Wang BL. Syntheses, structures and properties of complexes of indole-3-propionic acid. TRANSIT METAL CHEM 2016. [DOI: 10.1007/s11243-016-0057-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Barnard RA, Dutta A, Schnobrich JK, Morrison CN, Ahn S, Matzger AJ. Two-Dimensional Crystals from Reduced Symmetry Analogues of Trimesic Acid. Chemistry 2015; 21:5954-61. [DOI: 10.1002/chem.201406332] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2014] [Indexed: 11/12/2022]
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Wu H, Sun W, Shi T, Liao X, Zhao W, Yang X. The various architectures and properties of a series of coordination polymers tuned by the central metals and auxiliary N-donor ligands. CrystEngComm 2014. [DOI: 10.1039/c4ce01602e] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Chen YX, Tang KK, Wang X, Chen BY, Qin GQ, Yang JH. Synthesis, Structure, Photoluminescence, and Theoretical Calculation of an rtl-type Zinc(II) Compound with Linear Trinuclear [Zn 3(COO) 4(μ 2-H 2O) 2] Subunits. Z Anorg Allg Chem 2014. [DOI: 10.1002/zaac.201400213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Chao TL, Yang CI. Three new homochiral coordination polymers involving two three-dimensional structural architectures: Syntheses, structures and magnetic properties. J SOLID STATE CHEM 2014. [DOI: 10.1016/j.jssc.2013.12.001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Chen X, Tong Y, Han MM, Cao KL, Feng YL. Two luminescent metal−organic frameworks constructed by unsymmetric tricarboxylate. INORG CHEM COMMUN 2014. [DOI: 10.1016/j.inoche.2013.11.033] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Lu YL, Zhao WJ, Feng X, Chai Y, Wu Z, Yang XW. Topological structures and properties of two new coordination polymers constructed from biphenyl-3,4′,5-tricarboxylic acid. J COORD CHEM 2013. [DOI: 10.1080/00958972.2012.761695] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Affiliation(s)
- Ying-Li Lu
- a Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of Ministry of Education , College of Chemistry and Materials Science, Shaanxi Key Laboratory of Physico-inorganic Chemistry, Agriculture Chemical Technology Institute, Northwest University , Xi’an , P.R. China
| | - Wen-Jie Zhao
- b Department of Biochemical Engineering , Xianyang Vocational Technical College , Xianyang , P. R. China
| | - Xing Feng
- a Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of Ministry of Education , College of Chemistry and Materials Science, Shaanxi Key Laboratory of Physico-inorganic Chemistry, Agriculture Chemical Technology Institute, Northwest University , Xi’an , P.R. China
| | - Ying Chai
- a Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of Ministry of Education , College of Chemistry and Materials Science, Shaanxi Key Laboratory of Physico-inorganic Chemistry, Agriculture Chemical Technology Institute, Northwest University , Xi’an , P.R. China
| | - Zhe Wu
- a Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of Ministry of Education , College of Chemistry and Materials Science, Shaanxi Key Laboratory of Physico-inorganic Chemistry, Agriculture Chemical Technology Institute, Northwest University , Xi’an , P.R. China
| | - Xu-Wu Yang
- a Key Laboratory of Synthetic and Natural Functional Molecule Chemistry of Ministry of Education , College of Chemistry and Materials Science, Shaanxi Key Laboratory of Physico-inorganic Chemistry, Agriculture Chemical Technology Institute, Northwest University , Xi’an , P.R. China
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Gu JZ, Kirillov AM, Wu J, Lv DY, Tang Y, Wu JC. Synthesis, structural versatility, luminescent and magnetic properties of a series of coordination polymers constructed from biphenyl-2,4,4′-tricarboxylate and different N-donor ligands. CrystEngComm 2013. [DOI: 10.1039/c3ce41457d] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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Zhou H, Liu GX, Wang XF, Wang Y. Three cobalt(ii) coordination polymers based on V-shaped aromatic polycarboxylates and rigid bis(imidazole) ligand: syntheses, crystal structures, physical properties and theoretical studies. CrystEngComm 2013. [DOI: 10.1039/c2ce26606g] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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