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Thammakun T, Laohasiriwong W, Kraiklang R, Saengprajak N. Association of +62 G>A Polymorphism in the Resistin Gene with Type 2 Diabetes Mellitus among Thais: Case-Control Study. J Clin Diagn Res 2017; 11:BC15-BC20. [PMID: 28384852 DOI: 10.7860/jcdr/2017/25072.9390] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2016] [Accepted: 12/08/2016] [Indexed: 11/24/2022]
Abstract
INTRODUCTION Resistin gene (RETN) polymorphisms in humans may have a role in the pathogenesis of Type 2 Diabetes Mellitus (T2DM) and insulin resistance. There is still lack of evidence on association between +62 G>A polymorphism in the RETN and T2DM among Thais. AIM To determine the effect of polymorphisms at +62 G>A of RETN on Thai T2DM. MATERIALS AND METHODS This matched case control study was conducted with a total of 360 samples from all regions of Thailand (180 Thai new T2DM cases and 180 non-T2DM Thais for control) were enrolled. The RETN +62G>A polymorphism were detected using the Polymerase Chain Reaction (PCR) method. Conditional logistic regression was performed to test the association between +62 G>A polymorphism and T2DM. RESULTS Among 360 samples that were enrolled, only 350 samples completed molecular analysis. It was found that GA+AA genotype frequencies in T2DM cases was higher than control by 16% (95% CI: 6.0%, 27.0%, p-value=0.002). After adjustments for possible confounders, multivariable analyses by conditional logistic regression showed that the RETN+62 G>A polymorphism was statistically associated with Thai T2DM (ORadjusted =1.84, 95% CI: 1.03, 3.31, p-value=0.04). Other factors such as; low educational attainment (ORadjusted=3.87, 95%CI: 1.60, 9.36), hypertension (ORadjusted=3.07, 95%CI: 1.56, 6.04), had both obese father and mother (ORadjusted=1.94, 95%CI: 1.06, 3.56) and triglyceride≥150 (ORadjusted=2.18, 95% CI: 1.18, 4.02) were statistically associated with Thai T2DM (p-value<0.05). While regular consumption of glutinous rice was found to be a protective factor (ORadjusted=0.29, 95%CI: 0.13, 0.64). CONCLUSION These findings suggest that RETN polymorphism at position +62 G>A may increase the susceptibility to T2DM in Thais.
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Affiliation(s)
- Theerawut Thammakun
- Faculty, Department of Public Health, Khon Kaen University and Research and Training Center for Enhancing Quality of Life of Working Age People, Khon Kaen University , Khon Kaen, Thailand
| | - Wongsa Laohasiriwong
- Associate Professor, Department of Public Health, Khon Kaen University and Board Committee of Research and Training Centre for Enhancing Quality of Life of Working Age People (REQW), Khon Kaen University , Khon Kaen, Thailand
| | - Ratthaphol Kraiklang
- Lecturer, Department of Public Health, Khon Kaen University and Research Group on Prevention and Control of Diabetes in the Northeast , Khon Kaen, Thailand
| | - Nittaya Saengprajak
- Lecturer, Department of Public Health, Kalasin University , Kalasin, Thailand
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Nascimento H, Vieira E, Coimbra S, Catarino C, Costa E, Bronze-da-Rocha E, Rocha-Pereira P, Carvalho M, Ferreira Mansilha H, Rêgo C, Dos Santos R, Santos-Silva A, Belo L. Adipokine Gene Single-Nucleotide Polymorphisms in Portuguese Obese Adolescents: Associations with Plasma Concentrations of Adiponectin, Resistin, IL-6, IL-1β, and TNF-α. Child Obes 2016; 12:300-13. [PMID: 27159547 DOI: 10.1089/chi.2015.0235] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
BACKGROUND The genetic contribution to obesity and to circulating adipokine levels has not been completely clarified. We aimed to evaluate adipokine genes' single-nucleotide polymorphism (SNP) prevalence and its association with circulating adipokine levels and risk factors for cardiovascular disease in an obese Portuguese pediatric population. METHODS Two hundred forty-eight obese adolescents (mean age 13.4 years old; 47.2% females) participated in a cohort study. We screened 12 SNPs by direct sequencing in five adipokine genes: adiponectin (ADIPOQ: rs16861194, rs17300539, rs266729, rs2241766, rs1501299), interleukin-1β (IL-1β; rs1143627), IL-6 (IL-6; rs1800795), tumor necrosis factor-α (TNF-α; rs1800629), and resistin (RETN; rs1862513, rs3219177, rs3745367, rs3745368). Biochemical analysis included determination of circulating adipokines, C-reactive protein (CRP) levels, lipid profile, and markers of insulin resistance. RESULTS Compared to males, females presented higher circulating levels of insulin, adiponectin, IL-6, resistin, and leptin concentrations, but lower TNF-α levels. No statistically significant differences were found for genotype or allelic distributions between genders. In the whole sample population, adiponectin levels were influenced by ADIPOQ rs17300539 (c.-1138G>A; lower in subjects with GG genotype). When only males were considered, IL-1β, IL-6, and TNF-α levels were associated with ADIPOQ rs1501299 (c.214 + 62G>T; higher in GG subjects). TNF-α concentrations were modulated by TNF-α rs1800629 (c.-488G>A; lower in GG males), RETN rs1862513 (c.-216C>G; higher in CC subjects), and RETN rs3219177 (c.118 + 39C>T; higher in CC subjects). Leptin levels were influenced by IL-1β rs1143627 (c.-118C>T) presenting TT individuals' lower levels. CONCLUSIONS Our data demonstrate that in pediatric obese patients, some adipokine gene SNPs have an association with circulating adipokine levels and lipid profile.
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Affiliation(s)
- Henrique Nascimento
- 1 IBMC-Instituto de Biologia Molecular e Celular (Institute for Molecular and Cell Biology), Universidade do Porto , Porto, Portugal .,2 Instituto de Investigação e Inovação em Saúde (Institute for Research and Innovation in Health), Universidade do Porto , Porto, Portugal .,3 UCIBIO\REQUIMTE, Department of Biological Sciences, Laboratory of Biochemistry, Faculty of Pharmacy, University of Porto , Porto, Portugal
| | - Emília Vieira
- 4 Molecular Genetics Unit, Medical Genetics Center Dr. Jacinto de Magalhães , Porto Hospital Centre, Porto, Portugal
| | - Susana Coimbra
- 3 UCIBIO\REQUIMTE, Department of Biological Sciences, Laboratory of Biochemistry, Faculty of Pharmacy, University of Porto , Porto, Portugal .,5 CESPU, Institute of Research and Advanced Training in Health Sciences and Technologies (IINFACTS) , Gandra-PRD, Portugal
| | - Cristina Catarino
- 1 IBMC-Instituto de Biologia Molecular e Celular (Institute for Molecular and Cell Biology), Universidade do Porto , Porto, Portugal .,2 Instituto de Investigação e Inovação em Saúde (Institute for Research and Innovation in Health), Universidade do Porto , Porto, Portugal .,3 UCIBIO\REQUIMTE, Department of Biological Sciences, Laboratory of Biochemistry, Faculty of Pharmacy, University of Porto , Porto, Portugal
| | - Elísio Costa
- 1 IBMC-Instituto de Biologia Molecular e Celular (Institute for Molecular and Cell Biology), Universidade do Porto , Porto, Portugal .,2 Instituto de Investigação e Inovação em Saúde (Institute for Research and Innovation in Health), Universidade do Porto , Porto, Portugal .,3 UCIBIO\REQUIMTE, Department of Biological Sciences, Laboratory of Biochemistry, Faculty of Pharmacy, University of Porto , Porto, Portugal
| | - Elsa Bronze-da-Rocha
- 1 IBMC-Instituto de Biologia Molecular e Celular (Institute for Molecular and Cell Biology), Universidade do Porto , Porto, Portugal .,2 Instituto de Investigação e Inovação em Saúde (Institute for Research and Innovation in Health), Universidade do Porto , Porto, Portugal .,3 UCIBIO\REQUIMTE, Department of Biological Sciences, Laboratory of Biochemistry, Faculty of Pharmacy, University of Porto , Porto, Portugal
| | | | - Márcia Carvalho
- 7 FP-ENAS, CEBIMED, Fundação Ensino e Cultura Fernando Pessoa , Porto, Portugal
| | - Helena Ferreira Mansilha
- 8 Childhood and Adolescence Department of CMIN (Centro Materno-Infantil do Norte), Porto Hospital Centre, ICBAS (Instituto de Ciências Biomédicas Abel Salazar), University of Porto , Porto, Portugal
| | - Carla Rêgo
- 9 Children and Adolescent Centre, CUF Hospital, Center for Health Technology and Services Research (CINTESIS), Faculty of Medicine, University of Porto , Porto, Portugal
| | - Rosário Dos Santos
- 4 Molecular Genetics Unit, Medical Genetics Center Dr. Jacinto de Magalhães , Porto Hospital Centre, Porto, Portugal
| | - Alice Santos-Silva
- 1 IBMC-Instituto de Biologia Molecular e Celular (Institute for Molecular and Cell Biology), Universidade do Porto , Porto, Portugal .,2 Instituto de Investigação e Inovação em Saúde (Institute for Research and Innovation in Health), Universidade do Porto , Porto, Portugal .,3 UCIBIO\REQUIMTE, Department of Biological Sciences, Laboratory of Biochemistry, Faculty of Pharmacy, University of Porto , Porto, Portugal
| | - Luís Belo
- 1 IBMC-Instituto de Biologia Molecular e Celular (Institute for Molecular and Cell Biology), Universidade do Porto , Porto, Portugal .,2 Instituto de Investigação e Inovação em Saúde (Institute for Research and Innovation in Health), Universidade do Porto , Porto, Portugal .,3 UCIBIO\REQUIMTE, Department of Biological Sciences, Laboratory of Biochemistry, Faculty of Pharmacy, University of Porto , Porto, Portugal
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Basson JJ, de Las Fuentes L, Rao DC. Single nucleotide polymorphism-single nucleotide polymorphism interactions among inflammation genes in the genetic architecture of blood pressure in the Framingham Heart Study. Am J Hypertens 2015; 28:248-55. [PMID: 25063733 DOI: 10.1093/ajh/hpu132] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
BACKGROUND Hypertension is a major global health burden, but, although systolic and diastolic blood pressure (BP) each have estimated heritability of at least 30%, <3% of their variance has been attributed to particular genetic variants. Few studies have shown interactions between pairs of single nucleotide polymorphisms (SNPs) to be associated with BP. Although many studies use a Bonferroni correction for multiple testing to control type I error, thereby potentially reducing power, false discovery rate (FDR) approaches are also used in genome-wide studies. Renal ion balance genes have been associated with BP regulation, but, although inflammation has been studied in connection with BP, few studies have reported associations between inflammation genes and BP. METHODS We analyzed SNP-SNP interactions among 31 SNPs from genes involved in renal ion balance and 30 SNPs from genes involved in inflammation using data from the Framingham Heart Study. RESULTS No evidence of association was found for interactions among renal ion balance SNPs for either systolic or diastolic BP. A group of 3 interactions involving 6 inflammation genes (IKBKB-NFKBIA, IKBKE-CHUK, and ADIPOR2-RETN) showed evidence of association with diastolic BP with an FDR of 4.2%; no single interaction reached experiment-wide significance. CONCLUSIONS This study identified promising and biologically plausible candidates for interactions between inflammation genes that may be associated with DBP. Analysis using the FDR may allow detection of signals in the presence of modest noise (false positives) that a stringent approach based on Bonferroni-corrected P value thresholds may miss.
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Affiliation(s)
- Jacob J Basson
- Division of Biostatistics, Washington University School of Medicine, St. Louis, Missouri, USA;
| | - Lisa de Las Fuentes
- Division of Biostatistics, Washington University School of Medicine, St. Louis, Missouri, USA; Department of Medicine, Cardiovascular Division, Washington University School of Medicine, St. Louis, Missouri, USA
| | - Dabeeru C Rao
- Division of Biostatistics, Washington University School of Medicine, St. Louis, Missouri, USA
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