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Rapid detection of porcine encephalomyocarditis virus (EMCV) by isothermal reverse transcription recombinase polymerase amplification assays. J Virol Methods 2022; 306:114544. [PMID: 35595156 DOI: 10.1016/j.jviromet.2022.114544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 05/11/2022] [Accepted: 05/12/2022] [Indexed: 11/20/2022]
Abstract
In this study, we combined reverse transcription recombinase polymerase amplification assay with the fluorescence detection platform (qRT-RPA) and lateral flow biosensor (LFB RT-RPA) to allow for rapid detection of porcine encephalomyocarditis virus (EMCV). Primers and probes were designed to target the highly conserved region of 3D gene of porcine EMCV. The optimal reaction condition of qRT-RPA and LFB RT-RPA was set as 42 °C for 20 min. The assays were highly specific to EMCV and no cross-reactions were observed with seven other porcine viruses. With a 10-fold serially diluted EMCV genomic RNA as template, the limit of detection was 1.0 × 102 and 1.0 × 101 copies for qRT-RPA assay and LFB RT-RPA assay, respectively. A total of 92 samples from different sources were examined using qRT-RPA, LFB RT-RPA and qRT-PCR. We found 100% diagnostic agreement between qRT-RPA (23/92) and qRT-PCR (23/92), and 97.83% diagnostic agreement between LFB RT-RPA (25/92) and qRT-PCR (23/92). There was no significant difference in performance between the RT-RPA assays developed in this study and a previously described qRT-PCR. However, RT-RPA assays were rapid and easy to perform while LFB RT-RPA exhibited higher sensitivity for EMCV than qRT-PCR. Therefore, the developed EMCV RT-RPA assays provide an attractive and promising tool for effective detection of EMCV in low-resource settings.
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Development of a Multiplex RT-PCR Assay for Simultaneous Detection of Four Potential Zoonotic Swine RNA Viruses. Vet Sci 2022; 9:vetsci9040176. [PMID: 35448674 PMCID: PMC9029180 DOI: 10.3390/vetsci9040176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Revised: 03/26/2022] [Accepted: 04/04/2022] [Indexed: 11/24/2022] Open
Abstract
Swine viruses like porcine sapovirus (SaV), porcine encephalomyocarditis virus (EMCV), porcine rotavirus A (RVA) and porcine astroviruses (AstV) are potentially zoonotic viruses or suspected of potential zoonosis. These viruses have been detected in pigs with or without clinical signs and often occur as coinfections. Despite the potential public health risks, no assay for detecting them all at once has been developed. Hence, in this study, a multiplex RT-PCR (mRT-PCR) assay was developed for the simultaneous detection of SaV, EMCV, RVA and AstV from swine fecal samples. The PCR parameters were optimized using specific primers for each target virus. The assay’s sensitivity, specificity, reproducibility, and application to field samples have been evaluated. Using a pool of plasmids containing the respective viral target fragments as a template, the developed mRT-PCR successfully detected 2.5 × 103 copies of each target virus. The assay’s specificity was tested using six other swine viruses as a template and did not show any cross-reactivity. A total of 280 field samples were tested with the developed mRT-PCR assay. Positive rates for SaV, EMCV, RVA, and AstV were found to be 24.6% (69/280), 5% (14/280), 4.3% (12/280), and 17.5% (49/280), respectively. Compared to performing separate assays for each virus, this mRT-PCR assay is a simple, rapid, and cost-effective method for detecting mixed or single infections of SaV, EMCV, RVA, and AstV.
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Werid GM, Ibrahim YM, Chen H, Fu L, Wang Y. Molecular Detection and Genetic Characterization of Potential Zoonotic Swine Enteric Viruses in Northern China. Pathogens 2022; 11:pathogens11040417. [PMID: 35456092 PMCID: PMC9031704 DOI: 10.3390/pathogens11040417] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2022] [Revised: 03/23/2022] [Accepted: 03/25/2022] [Indexed: 12/04/2022] Open
Abstract
Despite significant economic and public health implications, swine enteric viruses that do not manifest clinical symptoms are often overlooked, and data on their epidemiology and pathogenesis are still scarce. Here, an epidemiological study was carried out by using reverse transcription-polymerase chain reaction (RT-PCR) and sequence analysis in order to better understand the distribution and genetic diversity of porcine astrovirus (PAstV), porcine encephalomyocarditis virus (EMCV), porcine kobuvirus (PKV), and porcine sapovirus (PSaV) in healthy pigs reared under specific pathogen-free (SPF) or conventional farms. PKV was the most prevalent virus (51.1%, 247/483), followed by PAstV (35.4%, 171/483), then PSaV (18.4%, 89/483), and EMCV (8.7%, 42/483). Overall, at least one viral agent was detected in 300 out of 483 samples. Out of the 300 samples, 54.0% (162/300), 13.0% (39/300), or 1.0% (3/300) were found coinfected by two, three, or four viruses, respectively. To our knowledge, this is the first report of EMCV detection from porcine fecal samples in China. Phylogenetic analysis revealed genetically diverse strains of PAstV, PKV, and PSaV circulating in conventional and SPF farms. Detection of swine enteric viruses with a high coinfection rate in healthy pigs highlights the importance of continuous viral surveillance to minimize future economic and public health risks.
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Affiliation(s)
- Gebremeskel Mamu Werid
- State Key Laboratory of Veterinary Biotechnology, National Poultry Laboratory Animal Resource Center, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin 150069, China; (G.M.W.); (Y.M.I.); (H.C.)
| | - Yassein M. Ibrahim
- State Key Laboratory of Veterinary Biotechnology, National Poultry Laboratory Animal Resource Center, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin 150069, China; (G.M.W.); (Y.M.I.); (H.C.)
| | - Hongyan Chen
- State Key Laboratory of Veterinary Biotechnology, National Poultry Laboratory Animal Resource Center, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin 150069, China; (G.M.W.); (Y.M.I.); (H.C.)
| | - Lizhi Fu
- Chongqing Academy of Animal Science, Chongqing 408599, China
- Correspondence: (L.F.); (Y.W.)
| | - Yue Wang
- State Key Laboratory of Veterinary Biotechnology, National Poultry Laboratory Animal Resource Center, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin 150069, China; (G.M.W.); (Y.M.I.); (H.C.)
- Chongqing Academy of Animal Science, Chongqing 408599, China
- College of Veterinary Medicine, Southwest University, Chongqing 400715, China
- Correspondence: (L.F.); (Y.W.)
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Zhang Y, Zhang Z, Wang Z, Wang Z, Wang C, Feng C, Yuan W, Lin X, Wu S. Development of a droplet digital PCR assay for sensitive detection of porcine circovirus 3. Mol Cell Probes 2018; 43:50-57. [PMID: 30468765 DOI: 10.1016/j.mcp.2018.11.005] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2018] [Revised: 11/19/2018] [Accepted: 11/19/2018] [Indexed: 01/26/2023]
Abstract
Porcine circovirus 3 (PCV3), a newly emerged circovirus, is associated with porcine dermatitis and nephropathy syndrome, reproductive failure and multi-systemic inflammation disease, and is widely distributed in pig populations worldwide. Therefore, developing specific diagnostic assays will be important for controlling this emerging pathogen. In this study, we developed a novel droplet digital PCR (ddPCR) assay targeting the PCV3 cap gene to improve the sensitivity of PCV3 detection. The established assay is highly specific to PCV3, and does not cross react with other important swine pathogens. The assay's detection limit was 1.68 ± 0.29 copies of PCV3 DNA per reaction (n = 8), an approximately 10-fold greater sensitivity than that of our previously developed quantitative real-time PCR (qPCR) assay for the same virus. The ddPCR assay results were highly reproducible, with intra- and inter-assay coefficient of variation values of <9.0%. Of the 239 archived pig tissue and serum samples, 42 tested positive for PCV3 by the ddPCR assay. Among the 42 positive samples, 31 tested positive by the qPCR assay. Notably, PCV3 was detected in the serum samples collected from commercially imported healthy boars from the US, France and the UK during 2011-2017. The overall agreement between the two assays was 95.39% (228/239). Furthermore, the linear regression analysis showed that the ddPCR and the qPCR results were significantly correlated with an R2 value of 0.9945. Collectively, these results indicate that the ddPCR assay is a robust diagnostic tool for sensitive detection of PCV3, even in samples with low viral loads.
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Affiliation(s)
- Yongning Zhang
- Institute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100176, China.
| | - Zhou Zhang
- Institute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100176, China
| | - Zhanying Wang
- College of Animal Science and Technology, Southwest University, Chongqing, 400715, China
| | - Zili Wang
- College of Animal Science and Technology, Southwest University, Chongqing, 400715, China
| | - Caixia Wang
- Institute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100176, China
| | - Chunyan Feng
- Institute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100176, China
| | - Wanzhe Yuan
- College of Veterinary Medicine, Agricultural University of Hebei, Baoding, 071001, China
| | - Xiangmei Lin
- Institute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100176, China
| | - Shaoqiang Wu
- Institute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing, 100176, China.
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5
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Real-time RPA assay for rapid detection and differentiation of wild-type pseudorabies and gE-deleted vaccine viruses. Anal Biochem 2018; 543:122-127. [DOI: 10.1016/j.ab.2017.12.012] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2017] [Revised: 12/08/2017] [Accepted: 12/09/2017] [Indexed: 11/20/2022]
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6
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Liu H, Li Y, Zhang G, Sang S, Wang C, Chang H. Complete genome sequences and phylogenetic analysis of encephalomyocarditis virus strains isolated from pigs and rats origin. INFECTION GENETICS AND EVOLUTION 2017; 55:277-280. [DOI: 10.1016/j.meegid.2017.09.032] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2017] [Revised: 09/07/2017] [Accepted: 09/27/2017] [Indexed: 11/15/2022]
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Wang J, Zhang Y, Wang J, Liu L, Pang X, Yuan W. Development of a TaqMan-based real-time PCR assay for the specific detection of porcine circovirus 3. J Virol Methods 2017; 248:177-180. [PMID: 28743583 DOI: 10.1016/j.jviromet.2017.07.007] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2017] [Revised: 07/17/2017] [Accepted: 07/17/2017] [Indexed: 11/20/2022]
Abstract
Porcine circovirus 3 (PCV3) is a novel circovirus that was associated with porcine dermatitis and nephropathy syndrome, reproductive failure, and multisystemic inflammation. The objective of this study was to develop a rapid, simple, specific and sensitive TaqMan-based real-time PCR assay for PCV3 detection. Specific primers and probe were designed for the cap gene of PCV3 within the conserved region of viral genome. The assay was highly specific for PCV3, without cross-reactions with other non-targeted pig viruses. The detection limit of this assay was 102 copies. The assay had an efficiency of 95.7%, a regression squared value (R2) of 0.994 and showed a linear range of 102-107 copies PCV3 DNA per reaction. The assay was also very reproducible, with the intra- and inter-assay coefficient of variation less than 2.0%. For the 112 archived clinical samples collected from 2014 to March 2017, the PCV3 positive ratio was 12.5% (14/112) with the real-time PCR. The presence of the PCV3 dated back to at least 2014 in China and samples collected in 2017 had the highest PCV3 positive ratio (46.7%, 7/15). The real-time PCR assay could be used for detection of PCV3 in epidemiological and pathogenesis studies.
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Affiliation(s)
- Jianchang Wang
- Center of Inspection and Quarantine, Hebei Entry-Exit Inspection and Quarantine Bureau, Shijiazhuang, Hebei 050051, China
| | - Yongning Zhang
- Institute of Animal Quarantine, Chinese Academy of Inspection and Quarantine, Beijing 100176, China
| | - Jinfeng Wang
- Center of Inspection and Quarantine, Hebei Entry-Exit Inspection and Quarantine Bureau, Shijiazhuang, Hebei 050051, China
| | - Libing Liu
- Center of Inspection and Quarantine, Hebei Entry-Exit Inspection and Quarantine Bureau, Shijiazhuang, Hebei 050051, China
| | - Xiaoyu Pang
- College of Veterinary Medicine, Agricultural University of Hebei, Baoding, Hebei 071001, China
| | - Wanzhe Yuan
- College of Veterinary Medicine, Agricultural University of Hebei, Baoding, Hebei 071001, China.
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Yu H, Huang L, Zhang Y, Hu L, Wang S, Li J, Cai X, Cui S, Weng C. An attenuated EMCV-HB10 strain acts as a live viral vector delivering a foreign gene. J Gen Virol 2016; 97:2280-2290. [PMID: 27392429 DOI: 10.1099/jgv.0.000541] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
We successfully constructed a full-length cDNA infectious clone of the encephalomyocarditis virus (EMCV) HB10 strain and obtained a partially attenuated rEMCV-C9 virus with a shorter poly(C) tract. Our results showed that the length of the EMCV-HB10 poly(C) tract was related to the pathogenicity of the EMCV-HB10 strain in vivo. Using pEMCV-C9 as the backbone, we constructed the novel viral vector pC9-MCS-∆2A by inserting a cDNA fragment containing a 127 amino acid deletion in the 2A protein, a primary cleavage cassette, a FLAG tag and a multiple cloning site (MCS) at the junction of VP1 and ∆2A. Additionally, the enhanced green fluorescent protein (egfp) gene was cloned into the MCS of pC9-MCS-∆2A to test its capacity to express foreign proteins. Insertion of the egfp gene did not affect viral replication, and a decrease in EGFP expression was observed within five serial passages. Furthermore, we found that rC9-EGFP-∆2A was avirulent in vivo, induced neutralizing antibody production and conferred protective immune responses against lethal challenge with EMCV in mice. Taken together, our results demonstrated that we had constructed an attenuated live vector based on an EMCV-HB10 strain with two modified critical virulence factors (the poly(C) tract and 2A protein) that could be used as a candidate live vaccine and a potential live viral vector for foreign antigen delivery.
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Affiliation(s)
- Huibin Yu
- State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, PR China
| | - Li Huang
- State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, PR China
| | - Yuanfeng Zhang
- State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, PR China
| | - Liang Hu
- State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, PR China
| | - Shengnan Wang
- State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, PR China
| | - Jiangnan Li
- State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, PR China
| | - Xuehui Cai
- State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, PR China
| | - Shangjin Cui
- State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, PR China
| | - Changjiang Weng
- State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute of Chinese Academy of Agricultural Sciences, Harbin, PR China
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Liu H, He X, Song X, Xu L, Zhang Y, Zhou G, Zhu W, Chang C, Yin Z, Shi Y, Wang C, Chang H. Isolation and molecular and phylogenetic analyses of encephalomyocarditis virus from wild boar in central China. INFECTION GENETICS AND EVOLUTION 2016; 40:67-72. [PMID: 26917364 DOI: 10.1016/j.meegid.2016.02.025] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2015] [Revised: 02/02/2016] [Accepted: 02/20/2016] [Indexed: 11/26/2022]
Abstract
Encephalomyocarditis virus (EMCV) can infect many host species and cause acute myocarditis and respiratory failure in piglets, reproductive failure in pregnant sows. In this study, an EMCV strain, designated JZ1202, was isolated from semi-captive wild boars that presented with acute myocarditis and sudden death in central China. It was identified by hemagglutination inhibition (HI) assay, reverse transcription polymerase chain reaction (RT-PCR) and genome sequencing. The subsequent results showed that the virus could produce a specific cytopathic effect on BHK cells and could cause clinical symptoms and pathological changes in mice. Complete genome sequencing and multiple sequence alignment indicated that JZ1202 strain was 81.3%-99.9% identical with other isolates worldwide. Phylogenetic analysis of the whole genome, ORF, VP3/VP1 and 3D genes using neighbor-joining method revealed that JZ1202 isolate was grouped into lineage 1. The results of this study confirmed that an EMCV strain JZ 1202 isolated from wild boar in central China was fatal to mice and provided new epidemiologic data on EMCV in China.
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Affiliation(s)
- Huimin Liu
- College of Life Science, Henan Agricultural University, Zhengzhou, Henan Province, China.
| | - Xiuyuan He
- College of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan Province, China
| | - Xiaofeng Song
- College of Life Science, Henan Agricultural University, Zhengzhou, Henan Province, China
| | - Liang Xu
- College of Life Science, Henan Agricultural University, Zhengzhou, Henan Province, China
| | - Yun Zhang
- College of Life Science, Henan Agricultural University, Zhengzhou, Henan Province, China
| | - Guoli Zhou
- College of Life Science, Henan Agricultural University, Zhengzhou, Henan Province, China
| | - Wenjiao Zhu
- College of Life Science, Henan Agricultural University, Zhengzhou, Henan Province, China
| | - Chen Chang
- College of Life Science, Henan Agricultural University, Zhengzhou, Henan Province, China
| | - Zhian Yin
- College of Life Science, Henan Agricultural University, Zhengzhou, Henan Province, China
| | - Yuhang Shi
- College of Life Science, Henan Agricultural University, Zhengzhou, Henan Province, China
| | - Chuanqing Wang
- College of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan Province, China
| | - Hongtao Chang
- College of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, Henan Province, China.
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10
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Isolation, molecular and phylogenetic analysis of encephalomyocarditis virus strain GS01 in China. INFECTION GENETICS AND EVOLUTION 2015; 30:19-26. [DOI: 10.1016/j.meegid.2014.12.004] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2014] [Revised: 11/19/2014] [Accepted: 12/02/2014] [Indexed: 11/17/2022]
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11
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Yuan W, Zheng Y, Sun M, Zhang X, Qi Y, Sun J. Development of a TaqMan-based real-time reverse transcription polymerase chain reaction assay for the detection of encephalomyocarditis virus. J Virol Methods 2014; 207:60-5. [PMID: 24996131 DOI: 10.1016/j.jviromet.2014.06.004] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2014] [Revised: 06/01/2014] [Accepted: 06/03/2014] [Indexed: 11/19/2022]
Abstract
Encephalomyocarditis virus (EMCV) is one of the major zoonosis pathogens and can cause acute myocarditis in young pigs or reproductive failure in sows. In this study, a TaqMan-based real-time reverse transcription polymerase chain reaction (RT-PCR) assay targeting 3D gene of EMCV was developed and their sensitivities and specificities were investigated. The results indicated that the standard curve had a wide dynamic range (10(1)-10(6) copies/μL) with a linear correlation (R(2)) of 0.996 between the cycle threshold (Ct) value and template concentration. The real-time RT-PCR assay is highly sensitive and able to detect 1.4×10(2) copies/μL of EMCV RNA, as no cross-reaction was observed with other viruses. These data suggested that the real-time RT-PCR assay developed in this study will be suitable for future surveillance and specific diagnosis of EMCV-infection.
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Affiliation(s)
- Wanzhe Yuan
- College of Animal Medicine, Agricultural University of Hebei, Baoding 071001, Hebei, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding 071001, Hebei, China; North China Research Center of Animal Epidemic Pathogen Biology, China, Agriculture Ministry, Baoding 071001, Hebei, China
| | - Yingshuai Zheng
- College of Animal Medicine, Agricultural University of Hebei, Baoding 071001, Hebei, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding 071001, Hebei, China; North China Research Center of Animal Epidemic Pathogen Biology, China, Agriculture Ministry, Baoding 071001, Hebei, China
| | - Mingtan Sun
- College of Animal Medicine, Agricultural University of Hebei, Baoding 071001, Hebei, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding 071001, Hebei, China; North China Research Center of Animal Epidemic Pathogen Biology, China, Agriculture Ministry, Baoding 071001, Hebei, China
| | - Xiuyuan Zhang
- College of Animal Medicine, Agricultural University of Hebei, Baoding 071001, Hebei, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding 071001, Hebei, China; North China Research Center of Animal Epidemic Pathogen Biology, China, Agriculture Ministry, Baoding 071001, Hebei, China
| | - Yan Qi
- College of Animal Medicine, Agricultural University of Hebei, Baoding 071001, Hebei, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding 071001, Hebei, China; North China Research Center of Animal Epidemic Pathogen Biology, China, Agriculture Ministry, Baoding 071001, Hebei, China
| | - Jiguo Sun
- College of Animal Medicine, Agricultural University of Hebei, Baoding 071001, Hebei, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding 071001, Hebei, China; North China Research Center of Animal Epidemic Pathogen Biology, China, Agriculture Ministry, Baoding 071001, Hebei, China.
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12
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Yuan W, Wang J, Sun M, Zheng Y, Li L, Zhang X, Sun J. Rapid detection of encephalomyocarditis virus by one-step reverse transcription loop-mediated isothermal amplification method. Virus Res 2014; 189:75-8. [PMID: 24815878 DOI: 10.1016/j.virusres.2014.04.015] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2014] [Revised: 04/11/2014] [Accepted: 04/22/2014] [Indexed: 11/18/2022]
Abstract
The encephalomyocarditis virus (EMCV) can cause acute myocarditis in young pigs or reproductive failure in sows. In this study, a reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay was developed to detect EMCV RNA. The RT-LAMP assay was highly sensitive and able to detect 2.2 × 10(-5)ng of EMCV RNA, as no cross-reaction was observed with other viruses. The RT-LAMP assay was conducted in isothermal (62 °C) conditions within 50 min. The amplified products of EMCV could be detected as ladder-like bands using agarose gel electrophoresis. This is the first report to demonstrate the application of a one-step RT-LAMP assay for the detection of EMCV. The sensitive, specific and rapid RT-LAMP assay developed in this study can be applied widely in clinical diagnosis and field surveillance of EMCV.
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Affiliation(s)
- Wanzhe Yuan
- College of Animal Medicine, Agricultural University of Hebei, Baoding, Hebei 071001, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding, Hebei 071001, China; North China Research Center of Animal Epidemic Pathogen Biology, Chinese Ministry of Agriculture, Baoding, Hebei 071001, China
| | - Jianchang Wang
- Center of Technology, Hebei Entry-Exit Inspection and Quarantine Bureau, Shijiazhuang, Hebei 050051, China
| | - Mingtan Sun
- College of Animal Medicine, Agricultural University of Hebei, Baoding, Hebei 071001, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding, Hebei 071001, China; North China Research Center of Animal Epidemic Pathogen Biology, Chinese Ministry of Agriculture, Baoding, Hebei 071001, China
| | - Yingshuai Zheng
- College of Animal Medicine, Agricultural University of Hebei, Baoding, Hebei 071001, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding, Hebei 071001, China; North China Research Center of Animal Epidemic Pathogen Biology, Chinese Ministry of Agriculture, Baoding, Hebei 071001, China
| | - Limin Li
- College of Animal Medicine, Agricultural University of Hebei, Baoding, Hebei 071001, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding, Hebei 071001, China; North China Research Center of Animal Epidemic Pathogen Biology, Chinese Ministry of Agriculture, Baoding, Hebei 071001, China
| | - Xiuyuan Zhang
- College of Animal Medicine, Agricultural University of Hebei, Baoding, Hebei 071001, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding, Hebei 071001, China; North China Research Center of Animal Epidemic Pathogen Biology, Chinese Ministry of Agriculture, Baoding, Hebei 071001, China
| | - Jiguo Sun
- College of Animal Medicine, Agricultural University of Hebei, Baoding, Hebei 071001, China; Hebei Engineering and Technology Research Center of Veterinary Biotechnology, Baoding, Hebei 071001, China; North China Research Center of Animal Epidemic Pathogen Biology, Chinese Ministry of Agriculture, Baoding, Hebei 071001, China.
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