Selecting lichen functional traits as ecological indicators of the effects of urban environment

Use of lichens as bioindicators of contamination by agrochemicals and metals

The presence or absence of lichens serves as an indicator of the condition of an ecosystem and the degree to which it is contaminated by various agents, such as agrochemicals and metals. Evaluating the use of lichens as bioindicators of agrochemical contamination could provide a more comprehensive perspective of current contamination levels. Monitoring was conducted over a 4-month period in two study areas: one was a well-conserved area contaminated by metals, and the other was an area surrounded by agricultural crops contaminated by agrochemicals. Data on the presence and abundance of lichens in each study area were recorded at 10 monitoring points, a procedure that was repeated 16 times (every 15 days), and concentrations of heavy metals and "organophosphate" agrochemicals in the lichens collected were measured by means of Inductively Coupled Plasma Atomic Emission Spectroscopy (ICP-OES) and Gas Chromatography (GC), respectively. Generalized linear mixed models were used to assess abundance and richness, while general linear mixed models were used to attain Shannon diversity and Simpson dominance indices. Moreover, a multivariate analysis was performed in order to compare the lichen communities in both areas. The results indicated differences between the area contaminated by metals and that contaminated by agrochemicals in terms of abundance and Simpson's dominance index, while no differences were found in the case of the richness and diversity models. The PERMANOVA analysis additionally showed differences between the lichen communities in the two areas. The results also demonstrated that Canoparmelia caroliniana bioaccumulated metals in both areas. The levels of barium, cadmium, and sodium were higher in the area contaminated by metals, while concentrations of chromium and copper were higher in the area contaminated by agrochemicals. Finally, the concentrations of agrochemicals were higher in the area contaminated by agrochemicals and included toxic substances such as Methylparathion and Parathion, which are prohibited in Ecuador. In conclusion, this research underscores the importance of lichens as precise indicators of environmental health and contamination by agrochemicals and metals.

Biomarkers of pollution by glyphosate in the lichens, Parmotrema tinctorium and Usnea barbata

Glyphosate is a herbicide commonly used in agriculture for weed control. Current agricultural production demands vast amounts of this product, which are applied by ground or aerial spraying. The concomitant aerial currents promote glyphosate drift to vegetated or urban areas. In this context, we hypothesized that the lichens, Parmotrema tinctorum and Usnea barbata, could be sensitive to the action of glyphosate and therefore be used to bio-indicate the presence of this herbicide in areas affected by drift. Since living organisms respond in different ways to the action of herbicides, our interest was also to indicate biological markers responsive to the action of glyphosate, through concentrations and exposure times of the thallus, besides identifying the most sensitive species. We evaluated the effect of different concentrations (0.0, 4.8, 9.6, and 19.2 mg L-1) and exposure times (24, 48, and 72 hours) to glyphosate on the morphoanatomy, photobiont vitality, photosynthetic efficiency, and oxidative metabolism of the thalli. We found that the lichens, P. tinctorum and U. barbata, respond to glyphosate stress, with prospects for use in the biomonitoring of pollutant dispersal from plantation areas. When using P. tinctorum as a bioindicator, lichen morphoanatomy, photobiont vitality, and photosynthetic pigment concentration were efficient biomarkers for the effect of concentration and exposure time. For U. barbata, the lichenic morphoanatomy and the activity of SOD and APX enzymes were essential tools to indicate the herbicide action. Parmotrema tinctotum, however, was characterized as more sensitive in bio-indicating the presence of this herbicide to diagnose the air quality in urban areas or vegetation sectors adjacent to agricultural environments.

Lichens as spatially transferable bioindicators for monitoring nitrogen pollution

Excess nitrogen is a pollutant and global problem that harms ecosystems and can severely affect human health. Pollutant nitrogen is becoming more widespread and intensifying in the tropics. There is thus a requirement to develop nitrogen biomonitoring for spatial mapping and trend analysis of tropical biodiversity and ecosystems. In temperate and boreal zones, multiple bioindicators for nitrogen pollution have been developed, with lichen epiphytes among the most sensitive and widely applied. However, the state of our current knowledge on bioindicators is geographically biased, with extensive research effort focused on bioindicators in the temperate and boreal zones. The development of lichen bioindicators in the tropics is further weakened by incomplete taxonomic and ecological knowledge. In this study we performed a literature review and meta-analysis, attempting to identify characteristics of lichens that offer transferability of bioindication into tropical regions. This transferability must overcome the different species pools between source information - drawing on extensive research effort in the temperate and boreal zone - and tropical ecosystems. Focussing on ammonia concentration as the nitrogen pollutant, we identify a set of morphological traits and taxonomic relationships that cause lichen epiphytes to be more sensitive, or more resistant to this excess nitrogen. We perform an independent test of our bioindicator scheme and offer recommendations for its application and future research in the tropics.

Sulfur is in the Air: Cyanolichen Marriages and Pollution

Cyanolichens are symbiotic organisms involving cyanobacteria and fungi (bipartite) or with the addition of an algal partner (tripartite). Cyanolichens are known for their heightened susceptibility to environmental pollution. We focus here on the impacts on cyanolichens due to rising air pollution; we are especially interested in the role of sulfur dioxide on cyanolichen biology. Cyanolichens due to air pollution including sulfur dioxide exposure, show symptomatic changes including degradation of chlorophyll, lipid membrane peroxidation, decrease in ATP production, changes in respiration rate, and alteration of endogenous auxins and ethylene production, although symptoms are known to vary with species and genotype. Sulfur dioxide has been shown to be damaging to photosynthesis but is relatively benign on nitrogen fixation which proposes as a hypothesis that the algal partner may be more in harm's way than the cyanobiont. In fact, the Nostoc cyanobiont of sulfur dioxide-susceptible Lobaria pulmonaria carries a magnified set of sulfur (alkane sulfonate) metabolism genes capable of alkane sulfonate transport and assimilation, which were only unraveled by genome sequencing, a technology unavailable in the 1950-2000 epoch, where most physiology- based studies were performed. There is worldwide a growing corpus of evidence that sulfur has an important role to play in biological symbioses including rhizobia-legumes, mycorrhizae-roots and cyanobacteria-host plants. Furthermore, the fungal and algal partners of L. pulmonaria appear not to have the sulfonate transporter genes again providing the roles of ambient-sulfur (alkanesulfonate metabolism etc.) mediated functions primarily to the cyanobacterial partner. In conclusion, we have addressed here the role of the atmospheric pollutant sulfur dioxide to tripartite cyanolichen viability and suggest that the weaker link is likely to be the photosynthetic algal (chlorophyte) partner and not the nitrogen-fixing cyanobiont.

Evaluation for the spatiotemporal patterns of ecological vulnerability and habitat quality: implications for supporting habitat conservation and healthy sustainable development

Currently, the rapid socioeconomic development and urbanization around the world have caused the ecological environment on the earth surface to become extremely fragile and destroyed. In addition, the increasing demand of human beings for material also leads to the unsustainable development of resources and environment. However, how to achieve the win-win goal between socioeconomic development and ecological protection in the context of these impacts? It is becoming a major problem for governments and policy makers. To further reveal the contradiction between man and land, taking Wuhan metropolitan area as the study area, this study mainly proposed a framework for the comprehensive optimization of landscape pattern and ecological environment and constructed the ecological vulnerability mixed evaluation model. Then, the integrated valuation of ecosystem services and trade-offs (InVEST) model was employed to evaluate the changes in habitat quality, focusing on the analysis of the impact mechanism of the evolution of ecological environment. This study found that the hybrid model of landscape vulnerability can successfully explore the landscape ecological vulnerability of Wuhan metropolitan area from 2000 to 2020, and its spatiotemporal differentiation pattern was obvious. The InVEST model showed that the habitat quality had obvious spatial differentiation. On the whole, the overall quality of the habitat was low and the degradation degree was high. Furthermore, our study also showed that the change of landscape ecological environment was influenced by the common potential of local nature and social economy, rather than a single factor. Finally, the main purpose of this study is to help scientifically formulate habitat protection and landscape planning strategies through in-depth study of landscape ecological environment, so as to alleviate man-land contradiction and support regional sustainable development.

Differential response of two acidophytic lichens to increased reactive nitrogen availability

Lichens are one of the most responsive components of the ecosystem to reactive forms of nitrogen. In this work, we selected the lichen genera Cladonia and Usnea, composed of terricolous and epiphytic lichens respectively, and described as sensitive to nitrogen, to test the effects of different doses of nitrogen on lichen physiological parameters (photobiont and mycobiont vitality, chitin quantification, nitrogen content and stable isotopes analysis). The main objectives were to check if the activation of protective mechanisms could be stimulated in case of chronic stress (low nitrogen increase for prolonged time), and, if so, if a toxicity threshold could be identified above which these mechanisms fail. The two lichen genera were generally affected by prolonged exposure to increased nitrogen availability. However, Cladonia rangiformis was able to maintain physiological functioning at the lowest nitrogen doses used, whereas thalli of Usnea become overwhelmed. Moreover, the mycobiont appeared to be more sensitive than the photobiont responding to lower nitrogen doses. Although only studies of longer duration and testing more nitrogen doses will be able to determine an accurate toxicity threshold, these results give important clues on the use of lichens as biomonitors for the establishment of environmental policies.

Morpho-anatomical variations of Parmotrema pilosum (Parmeliaceae, Ascomycota) in fragmented forests of central Argentina: relationship between forest cover and distance to crops

Forest vegetation is key for buffering microclimatic factors and regulating atmospheric deposition. Epiphytic lichens are sensitive to these factors and can indicate the overall health status of the ecosystem. Specifically, the analysis of morpho-anatomical variations allows us to understand the degree of tolerance or sensitivity of these organisms exposed to agricultural crops and how vegetation might buffer this response. We analyzed variations in vegetative and reproductive characters and injuries in thalli of Parmotrema pilosum as a response to distance to crops and forest cover. The study was conducted in forest patches of the Espinal in central Argentina, an ecosystem threatened by agricultural activity. We selected 10 sites with different forest cover areas and two collection points differing in distance to crops: sites adjacent to (0 m) and far from (150 m) crops. We collected five thalli from each collection point and analyzed variations in morpho-anatomical characters at macro- and microscopic levels. We found a lower number of algae and a higher proportion of simple cilia in individuals at points adjacent to crops. At points with low forest cover, a thinner upper cortex was observed, whereas at points with greater forest cover, an increase of necrosis and greater presence of apothecia were detected. Bleaching was the most frequent injury at sites adjacent to crops, decreasing with increasing forest cover. Conservation and reforestation of Espinal forest patches would promote the propagation of lichens affected by agricultural practices.

Modelling the response of urban lichens to broad-scale changes in air pollution and climate

To create more resilient cities, it is important that we understand the effects of the global change drivers in cities. Biodiversity-based ecological indicators (EIs) can be used for this, as biodiversity is the basis of ecosystem structure, composition, and function. In previous studies, lichens have been used as EIs to monitor the effects of global change drivers in an urban context, but only in single-city studies. Thus, we currently do not understand how lichens are affected by drivers that work on a broader scale. Therefore, our aim was to quantify the variance in lichen biodiversity-based metrics (taxonomic and trait-based) that can be explained by environmental drivers working on a broad spatial scale, in an urban context where local drivers are superimposed. To this end, we performed an unprecedented effort to sample epiphytic lichens in 219 green spaces across a continental gradient from Portugal to Estonia. Twenty-six broad-scale drivers were retrieved, including air pollution and bio-climatic variables, and their dimensionality reduced by means of a principal component analysis (PCA). Thirty-eight lichen metrics were then modelled against the scores of the first two axes of each PCA, and their variance partitioned into pollution and climate components. For the first time, we determined that 15% of the metric variance was explained by broad-scale drivers, with broad-scale air pollution showing more importance than climate across the majority of metrics. Taxonomic metrics were better explained by air pollution, as expected, while climate did not surpass air pollution in any of the trait-based metric groups. Consequently, 85% of the metric variance was shown to occur at the local scale. This suggests that further work is necessary to decipher the effects of climate change. Furthermore, although drivers working within cities are prevailing, both spatial scales must be considered simultaneously if we are to use lichens as EIs in cities at continental to global scales.

Response of Leaf Functional Traits of Landscape Plants to Urban Green Space Environment in Lanzhou, China

Leaf functional traits are the essential components of adaption plant strategies and have different responses to various environments, but our knowledge of how plants adapt to highly complex urban environments through coordinated changes in leaf functional traits is limited. In this study, we studied the response of landscape plants to the environments of sports field (SF), park (PAR), residential green space (RES), and greenway (GW), and analyzed the effects of the different green space environments on trade-off strategies of plants based on leaf functional traits. The results showed that leaf functional traits of plants and adaptation strategies varied among different urban environments in Lanzhou, China. Leaf length (LL), width (LW), area (LA), and special leaf area (SLA) were PAR > SF > RES > GW. Leaf nitrogen (LNC) and phosphorus content (LPC) were SF > PAR > RES > GW. Leaf carbon content (LCC), leaf dry matter content (LDMC), the ratio of leaf carbon and nitrogen (C/N), and the ratio of leaf carbon and phosphorus (C/P) was GW > RES > PAR > SF. The landscape plants in SF and PAR were more adaptive to the urban environment than those in RES and GW. Among different green space environments, landscape plants in SF and PAR tended to have an acquisitive strategy with high LL, LW, LA, SLA, LNC, and LPC. In contrast, plants in RES and GW tended to have a conservative strategy with a high level of concentration of LCC, LDMC, C/N, and C/P.

Tree decay modulates the functional response of lichen communities in Patagonian temperate forests

Epiphytic and epixylic lichens respond negatively to forest degradation, climate change and pollution, but those effects may depend on functional traits or interact with the stage of tree decay. Disentangling the main drivers of lichen communities remains a challenge in regions where lichens are diverse and poorly known, as the case of Patagonian temperate forests. We used a multi-scale approach to evaluate the relationship between environmental variables, tree decay stage and lichens. We sampled lichens across three increasing scales (tree ≪ site ≪ landscape) by selecting 19 landscape units, where trees in four decay stages (snags, logs, cavity trees and healthy trees) were selected within sampling plots. A total of 35 predictors were measured over different scales, including 25 remote sensing indices of forest conditions, climate and air pollutants. Structural Equation Models were used to test the causal linkages of predictors with lichens, distinguishing functional categories (size, growth and reproductive strategy). A total of 69 lichen species were recorded. Cavity trees and logs supported the largest diversity, while snags and healthy trees had the lowest diversity. Functional lichen groups responded differently to fine-scale variables, including the diameter, height, density and pH of trees. Air pollutants affected species with sexual and mixed strategies. Lichens were sensitive to precipitation, temperature and wind speed, with foliose and sexual species responding positively to the latter. The abundance of all species and macrolichens increased with tree senescence and decreased with canopy continuity. Lichens occupying snags and logs responded negatively to primary productivity and tree senescence, but positively to soil organic matter. Our findings suggest: i) the functional structure of lichen communities varies non-linearly with the wood decay process; ii) the reproductive strategy influences the sensitivity to air pollutants, iii) climate variables influence dispersal and colonization of woody substrates; and iv) forest structure/succession interacts with tree decay.

Shifts in Lichen Species and Functional Diversity in a Primeval Forest Ecosystem as a Response to Environmental Changes

Research highlights: shifts in the composition and functional diversity of lichen biota reflect changes in the environment caused by climate warming and eutrophication. Background and objectives: studies on lichen functional diversity and refinement in the functional traits of lichen biota under the pressure of changing environmental factors are currently of great scientific interest. The obtained results are interpreted in relation to specific habitat properties and their modifications due to the potential effects of climate change and atmospheric pollution. The aim of the work was to investigate changes in lichen species composition and functional diversity, as well as to identify factors responsible for them at different forest ecosystem scales. Materials and Methods: we identified factors responsible for changes in lichen biota in a unique Białowieża Forest ecosystem by analyzing shifts in species optima and functional diversity at the forest community, tree phorophyte, and substrate levels. We examined individual lichen species’ responses and temporal shifts in the species composition for each historical and resampled dataset using a community-weighted means of functional lichen traits and Wirth ecological indicator values. Results: the most evident change took place at the level of individual species, which shifted their realized optima: 25 species demonstrated a shift to co-occur with lichens of higher nitrogen demands, 15 demonstrated higher light demands, 14 demonstrated higher temperature preferences, and six demonstrated lower moisture preferences. At the level of forest communities, biota shifted towards the higher proportion of nitrogen-demanding and the lower proportion of moisture-demanding species. At the level of phorophyte species, biota changed towards an increased proportion of lichens of higher temperature preferences. For the substrate level, no directional shifts in lichen species composition were found. Conclusions: climate change has influenced lichen biota in Białowieża Forest, but the main driver of lichen species composition was found to be eutrophication. We suppose that other overlapping factors may contribute to biota shifts, e.g., the extinction and expansion of phorophyte tree species.

Composition and Specialization of the Lichen Functional Traits in a Primeval Forest—Does Ecosystem Organization Level Matter?

Current trends emphasize the importance of the examination of the functional composition of lichens, which may provide information on the species realized niche diversity and community assembly processes, thus enabling one to understand the specific adaptations of lichens and their interaction with the environment. We analyzed the distribution and specialization of diverse morphological, anatomical and chemical (lichen secondary metabolites) traits in lichen communities in a close-to-natural forest of lowland Europe. We considered these traits in relation to three levels of forest ecosystem organization: forest communities, phorophyte species and substrates, in order to recognize the specialization of functional traits to different levels of the forest complexity. Traits related to the sexual reproduction of mycobionts (i.e., ascomata types: lecanoroid apothecia, lecideoid apothecia, arthonioid apothecia, lirellate apothecia, stalked apothecia and perithecia) and asexual reproduction of mycobionts (pycnidia, hyphophores and sporodochia) demonstrated the highest specialization to type of substrate, tree species and forest community. Thallus type (foliose, fruticose, crustose and leprose thalli), ascospore dark pigmentation and asexual reproduction by lichenized diaspores (soredia and isidia) revealed the lowest specialization to tree species and substrate, as well as to forest community. Results indicate that lichen functional trait assemblage distribution should not only be considered at the level of differences in the internal structure of the analyzed forest communities (e.g., higher number of diverse substrates or tree species) but also studied in relation to specific habitat conditions (insolation, moisture, temperature, eutrophication) that are characteristic of a particular forest community. Our work contributes to the understanding of the role of the forest structure in shaping lichen functional trait composition, as well as enhancing our knowledge on community assembly rules of lichen species.

Functional Traits in Lichen Ecology: A Review of Challenge and Opportunity

Community ecology has experienced a major transition, from a focus on patterns in taxonomic composition, to revealing the processes underlying community assembly through the analysis of species functional traits. The power of the functional trait approach is its generality, predictive capacity such as with respect to environmental change, and, through linkage of response and effect traits, the synthesis of community assembly with ecosystem function and services. Lichens are a potentially rich source of information about how traits govern community structure and function, thereby creating opportunity to better integrate lichens into 'mainstream' ecological studies, while lichen ecology and conservation can also benefit from using the trait approach as an investigative tool. This paper brings together a range of author perspectives to review the use of traits in lichenology, particularly with respect to European ecosystems from the Mediterranean to the Arctic-Alpine. It emphasizes the types of traits that lichenologists have used in their studies, both response and effect, the bundling of traits towards the evolution of life-history strategies, and the critical importance of scale (both spatial and temporal) in functional trait ecology.

Ecological environment assessment based on land use simulation: A case study in the Heihe River Basin

Ecological environment assessment can not only provide significant references for effective solutions to regional ecological problems, but also promote the benign interaction of socio-economic-ecological development. This study selected the Heihe River Basin (HRB) as the typical area to comprehensively evaluate the ecological environment from 2010 to 2030 based on the dynamics of land system (DLS) model, which is coupled with the biological abundance index (BAI), vegetation coverage index (VCI), water density index (WDI), land degradation index (LDI), and eco-environment quality index (EQI). The results indicate that the BAI and VCI will be high in the south and east, low in the north and west in general. Under the future baseline scenario, the changes of biological abundance, vegetation coverage, and deteriorating land in the midstream and downstream regions will may seriously hinder restoration of the ecological environment. In particular, the BAI in the midstream and downstream regions will decline more rapidly, with a rate of 10.30% and 18.59%, respectively. The water area will be scattered and less abundant overall, but the WDI in the midstream, that is up to 3.86 in 2030, will be higher than that in other regions. Results also show that the regions with high EQI are mainly located in the northeast and south region. It is predicted that the ecological fragile zones in the future will mainly distribute in the midstream and downstream regions, especially in Jiayuguan City and Jinta County. The EQI will drop by 44.28% and 11.40% during 2010-2030 without external conditions intervened. In addition, Qilian Mountain, Jiuquan City, Gaotai County, Linze County, and Shandan County will also have relatively strong recovery capacities under the influence of ecological policies. All above could provide the basis for the development of future watershed ecological environment management and protection planning.

Modeling the provision of air-quality regulation ecosystem service provided by urban green spaces using lichens as ecological indicators

The UN Sustainable Development Goals states that urban air pollution must be tackled to create more inclusive, safe, resilient and sustainable cities. Urban green infrastructures can mitigate air pollution, but a crucial step to use this knowledge into urban management is to quantify how much air-quality regulation can green spaces provide and to understand how the provision of this ecosystem service is affected by other environmental factors. Considering the insufficient number of air quality monitoring stations in cities to monitor the wide range of natural and anthropic sources of pollution with high spatial resolution, ecological indicators of air quality are an alternative cost-effective tool. The aim of this work was to model the supply of air-quality regulation based on urban green spaces characteristics and other environmental factors. For that, we sampled lichen diversity in the centroids of 42 urban green spaces in Lisbon, Portugal. Species richness was the best biodiversity metric responding to air pollution, considering its simplicity and its significative response to the air pollutants concentration data measured in the existent air quality monitoring stations. Using that metric, we then created a model to estimate the supply of air quality regulation provided by green spaces in all green spaces of Lisbon based on the response to the following environmental drivers: the urban green spaces size and its vegetation density. We also used the unexplained variance of this model to map the background air pollution. Overall, we suggest that management should target the smallest urban green spaces by increasing green space size or tree density. The use of ecological indicators, very flexible in space, allow the understanding and the modeling of the provision of air-quality regulation by urban green spaces, and how urban green spaces can be managed to improve air quality and thus improve human well-being and cities resilience.

Lichen Responses to Disturbance: Clues for Biomonitoring Land-use Effects on Riparian Andean Ecosystems

The transformation of natural ecosystems due to anthropogenic land use is considered one of the main causes of biodiversity loss. Lichens, due to their poikilohydric nature, are very sensitive to natural and anthropogenic disturbances. Therefore, lichen communities have been widely used as bioindicators of climatic and environmental changes. In this study, we evaluated how the species richness and community composition of epiphytic lichens respond to land-use intensity in riparian ecosystems of the Andes in southern Ecuador. Additionally, we evaluate how the richness of six functional traits (photobiont type, growth form, and reproductive strategy) changed across the different land-use intensity. We selected 10 trees in twelve sites for a total de 120 trees, equally divided into four riparian land-use intensities (forest, forest-pasture, pasture and urban). We recorded a total of 140 lichen species. Species richness was highest in the forest sites and decreased towards more anthropogenic land uses. Lichen community composition responded to land-use intensity, and was explained by microclimate variables (e.g., precipitation, percentage forested area) and distance to the forest. Richness of functional traits of lichens also differed significantly among the four land-use intensity and decreased from forests to urban land-use. Taxonomic diversity and functional traits can be effectively applied as bioindicators to assess and monitor the effects of land-use changes in the riparian ecosystems of tropical montane regions.

Testing the Poleotolerance Lichen Response Trait as an Indicator of Anthropic Disturbance in an Urban Environment

Urban environments are densely populated areas buzzing with a wide range of anthropic activities that cause disturbances like air pollution or the heat island effect, threatening both human and environmental health. Mitigating its impacts implies understanding the integrated effects that those disturbances exert on urban environments. Lichen biodiversity is frequently used as an ecological indicator, being able to integrate its effects in a quantifiable way. The poleotolerance response trait classifies lichens according to their tolerance to human disturbance, but it was developed for Italy’s flora and has seldom been applied outside Italy or in urban context studies. The aim of this work was to assess this trait suitability as an indicator of urban anthropic disturbance and test it outside Italy. For that, we sampled lichen diversity in 41 green spaces in Lisbon. Lichens were classified into the respective poleotolerance trait functional groups and their community weighted mean related with three type of environmental variables used as surrogates of urban disturbance. We showed that disturbance-tolerant functional groups could be used as an ecological indicator of the integrated effects of environmental disturbances. Some species were clearly misclassified, so we propose reclassification for those. Natural and seminatural functional groups did not behave as expected. Nevertheless, disturbance-tolerant functional groups have the potential to be used in in other Southern European cities.