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Chernov NM, Shutov RV, Sipkina NY, Krivchun MN, Yakovlev IP. A Flexible Synthetic Approach to Fluorescent Chromeno[4,3-b]pyridines and Pyrano[3,2-c]chromenes from Electron-Deficient 3-Vinylchromones. Chempluschem 2021; 86:1256-1266. [PMID: 34472730 DOI: 10.1002/cplu.202100296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Revised: 08/18/2021] [Indexed: 11/09/2022]
Abstract
We report a flexible approach to the synthesis of phenanthrene-like heterocycles through organocatalytic ANRORC (Addition of the Nucleophile, Ring Opening, and Ring Closure) reaction of electron-deficient 3-vinylchromones with cyanoacetamide. Addition of highly basic DBU (1,8-diazabicyclo[5.4.0]undec-7-ene) or tetramethylguanidine (TMG) at 80 °C leads to chromeno[4,3-b]pyridines in good yields, whereas Et3 N at 20 °C made it possible to obtain the less accessible pyrano[3,2-c]chromenes and their 2-imines. The synthesis proceeds in mild conditions (EtOH, 20-80 °C), is versatile and applicable for a wide scope of reactants. The obtained compounds show bright fluorescence in the range 460-595 nm with high quantum yields (up to 0.84) in various solvents (MeCN, DMSO, EtOH, H2 O).
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Affiliation(s)
- Nikita M Chernov
- Organic Chemistry Department, Saint-Petersburg State Chemical Pharmaceutical University, Prof. Popov st., 14, Saint-Petersburg, 197376, Russia
| | - Roman V Shutov
- Organic Chemistry Department, Saint-Petersburg State Chemical Pharmaceutical University, Prof. Popov st., 14, Saint-Petersburg, 197376, Russia
| | - Nadezhda Yu Sipkina
- Analytical Center, Saint-Petersburg State Chemical Pharmaceutical University, Prof. Popov st., 14, Saint-Petersburg, 197376, Russia
| | - Maxim N Krivchun
- Organic Chemistry Department, Saint-Petersburg State Institute of Technology, Moskovsky av., 26, Saint-Petersburg, 190013, Russia
| | - Igor P Yakovlev
- Organic Chemistry Department, Saint-Petersburg State Chemical Pharmaceutical University, Prof. Popov st., 14, Saint-Petersburg, 197376, Russia
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2
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A novel and efficient synthesis of 3-aryl-5-(2-hydroxybenzoyl)pyridin-2(1H)-ones by re-cyclization of N-(oxopyranochromenyl)acetamides and their antineoplastic screening. CHEMICAL PAPERS 2019. [DOI: 10.1007/s11696-018-0566-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Dolatkhah Z, Javanshir S, Sadr AS, Hosseini J, Sardari S. Synthesis, Molecular Docking, Molecular Dynamics Studies, and Biological Evaluation of 4H-Chromone-1,2,3,4-tetrahydropyrimidine-5-carboxylate Derivatives as Potential Antileukemic Agents. J Chem Inf Model 2017; 57:1246-1257. [PMID: 28524659 DOI: 10.1021/acs.jcim.6b00138] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
A series of 4H-chromone-1,2,3,4-tetrahydropyrimidine-5-carboxylates derivatives were synthesized via a three component one-pot condensation of chromone-3-carbaldehyde, alkyl acetoacetate, and urea or thiourea, using MCM-41-SO3H as efficient nanocatalysts and evaluated for their anticancer activity using a combined in silico docking and molecular dynamics protocol to estimate the binding affinity of the title compounds with the Bcr-Abl oncogene. Two programs, AutoDock 4 and AutoDock Vina software were applied to dock the target protein with synthesized compounds and ATP. AutoDock runs resulted in binding energy scores from -7.8 to -10.16 kcal/mol for AutoDock 4 and -6.9 to -8.5 (kcal/mol) for AutoDock Vina. Furthermore, molecular dynamics (MD) simulations are performed using Gromacs for up to 20 ns simulation time investigating the stability of a ligand-protein complex. Finally, a theoretical experiment using MD simulation for 10 ns was performed without defining the initial coordinates, and the affinity binding of ligand to receptors was directly studied, which revealed that the ligand approaches the active sites. The relative free binding energy for the structure 06 (S06), which has the highest binding energy in Autodock 4 and Autodock Vina (-10.10 and -8.5 kcal/mol, respectively), was also evaluated by molecular mechanics (MM) with Poisson-Boltzmann (PB) and a surface area solvation (MM-PBSA) method using g_mmpbsa tools for the last 15 ns MD. On the basis of binding energy scores, a negative binding energy value of 73.6 kcal/mol, S06, was recognized as the dominant potential inhibitors. The cytotoxic properties of S06 was evaluated against three cell lines, acute T cell leukemia (Jurkat), human chronic myelogenous leukemia, (K562) and human foreskin fibroblast (Hu02) using the microculture tetrazolium test MTT assay. Cisplatin was used as the reference agent. The results indicated that S06 has a higher safety index (SI = 0.73, IC50 = 152.64 μg/mL for Jurkat and IC50 = 110.25 μg/mL for Hu02, P < 0.05 means ± SD for four independent experiments) compared to cisplatin (SI = 0.56, IC50 = 8.86 μg/mL for Jurkat and IC50 = 4.96 μg/mL for Hu02). The in silico results indicated that the proposed structures, which have no toxic effects, are potential tyrosine kinase inhibitors (TKIs) that target Bcr-Abl and thus prevent uncontrolled cell growth (proliferation) but not necessarily cell death (apoptosis) and might potentially constitute an interesting novel class of targeted antileukemic drugs, which deserve further studies.
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Affiliation(s)
- Zahra Dolatkhah
- Heterocyclic Chemistry Research Laboratory, Department of Chemistry, Iran University of Science and Technology , Tehran 16846-13114, Iran
| | - Shahrzad Javanshir
- Heterocyclic Chemistry Research Laboratory, Department of Chemistry, Iran University of Science and Technology , Tehran 16846-13114, Iran
| | - Ahmad Shahir Sadr
- Bioinformatics Research Center, Sabzevar University of Medical Sciences , Sabzevar 9613873136, Iran.,Bioinformatics Research Center, Cheragh Medical Institute and Hospital , Kabul 1001-1007, Afghanistan
| | - Jaber Hosseini
- Heterocyclic Chemistry Research Laboratory, Department of Chemistry, Iran University of Science and Technology , Tehran 16846-13114, Iran
| | - Soroush Sardari
- Drug Design and Bioinformatics Unit, Department of Medical Biotechnology, Biotechnology Research Center, Pasteur Institute of Iran , Pasteur Avenue, Tehran 13164, Iran
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Parmar BD, Sutariya TR, Brahmbhatt GC, Parmar NJ, Kant R, Gupta VK. A Base-Catalyzed, Domino Aldol/hetero-Diels-Alder Synthesis of Tricyclic Pyrano[3,4-c]chromenes in Glycerol. J Org Chem 2016; 81:4955-64. [PMID: 27171909 DOI: 10.1021/acs.joc.6b00107] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The domino aldol/hetero-Diels-Alder synthesis of some new tricyclic pyrano[3,4-c]chromene derivatives has been achieved successfully after assembling a variety of acyclic or cyclic monoketones with prenyl ether-tethered aldehydes in the presence of 1,8-diazabicyclo[5.4.0]undec-7-ene in glycerol at 120 °C. The hitherto unreported stereochemical outcome of this synthetic sequence was studied and established on the basis of single-crystal X-ray diffraction data and 2D NMR NOESY spectroscopy along with the isolation and characterization of the intermediate Aldol condensation product.
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Affiliation(s)
- Bhagyashri D Parmar
- Department of Chemistry, Sardar Patel University , Vallabh Vidyanagar, Anand District, Gujarat 388120, India
| | - Tushar R Sutariya
- Department of Chemistry, Sardar Patel University , Vallabh Vidyanagar, Anand District, Gujarat 388120, India
| | - Gaurangkumar C Brahmbhatt
- Department of Chemistry, Sardar Patel University , Vallabh Vidyanagar, Anand District, Gujarat 388120, India
| | - Narsidas J Parmar
- Department of Chemistry, Sardar Patel University , Vallabh Vidyanagar, Anand District, Gujarat 388120, India
| | - Rajni Kant
- Post-Graduate Department of Physics, University of Jammu , Jammu Tawi 180006, India
| | - Vivek K Gupta
- Post-Graduate Department of Physics, University of Jammu , Jammu Tawi 180006, India
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Akkurt M, Horton PN, Mohamed SK, Younes SHH, Albayati MR. Crystal structure of 3-amino-1-(4-chloro-phen-yl)-1H-benzo[f]chromene-2-carbo-nitrile. Acta Crystallogr E Crystallogr Commun 2015; 71:o481-2. [PMID: 26279919 PMCID: PMC4518915 DOI: 10.1107/s2056989015011159] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2015] [Accepted: 06/08/2015] [Indexed: 11/10/2022]
Abstract
In the title compound, C20H13ClN2O, the chloro-benzene ring is almost perpendicular to the mean plane of the naphthalene ring system, making a dihedral angle of 81.26 (8)°. The 4H-pyran ring fused with the naphthalene ring system has a flattened boat conformation. In the crystal, N-H⋯N hydrogen bonds generate chains along the b-axis direction. Further N-H⋯N hydrogen bonds link these chains into sheets parallel to (010). The crystal packing also features C-H⋯π inter-actions. The crystal studied was an inversion twin with a 0.557 (16):0.443 (16) domain ratio.
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Affiliation(s)
- Mehmet Akkurt
- Department of Physics, Faculty of Sciences, Erciyes University, 38039 Kayseri, Turkey
| | - Peter N. Horton
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, England
| | - Shaaban K. Mohamed
- Chemistry and Environmental Division, Manchester Metropolitan University, Manchester M1 5GD, England
- Chemistry Department, Faculty of Science, Minia University, 61519 El-Minia, Egypt
| | - Sabry H. H. Younes
- Chemistry Department, Faculty of Science, Sohag University, 82524 Sohag, Egypt
| | - Mustafa R. Albayati
- Kirkuk University, College of Science, Department of Chemistry, Kirkuk, Iraq
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Rajkumar K, Suman P, Raju BC. Facile construction of novel heterocyclic compounds: three-component, one-pot synthesis of 2-hydroxybenzoyl-1,2-dihydropyridine-3-carboxylates, ketones, pyridone-3-carboxylates and benzopyrido-1,3-oxazole-4-carboxylates. RSC Adv 2015. [DOI: 10.1039/c5ra10185a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Abstract
A facile method has been developed for the preparation of novel heterocyclic compounds facilitated by 3-oxobutanoates and 1,3-diketones possessing a trihalo group. This three-component, one-pot protocol provided heterocyclic compounds without a catalyst.
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Affiliation(s)
- Kommera Rajkumar
- Natural Products Chemistry Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad-500 007
- India
- AcSIR-Indian Institute of Chemical Technology
| | - Pathi Suman
- Natural Products Chemistry Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad-500 007
- India
| | - Bhimapaka China Raju
- Natural Products Chemistry Division
- CSIR-Indian Institute of Chemical Technology
- Hyderabad-500 007
- India
- AcSIR-Indian Institute of Chemical Technology
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Sepay N, Dey SP. Synthesis and Chemical Reactivity of 4-Oxo-4 H-1-benzopyran-3-carboxaldehyde. J Heterocycl Chem 2014. [DOI: 10.1002/jhet.2001] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Nayim Sepay
- Department of Chemistry; R.K.Mission Vivekananda Centenary College; Rahara Kolkata 700 118 West Bengal India
| | - Sankar P. Dey
- Department of Chemistry; Srikrishna College; Bagula Nadia-741502 West Bengal India
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Synthesis of new series of 3-hydroxy/acetoxy-2-phenyl-4H-chromen-4-ones and their biological importance. J CHEM SCI 2013. [DOI: 10.1007/s12039-013-0420-z] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Synthesis, reactions and antineoplastic activity of 3-(2-oxo-2H-chromen-3-yl)-2-oxo-2H,5H-pyrano[3,2-c]chromene derivatives. OPEN CHEM 2013. [DOI: 10.2478/s11532-012-0184-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
AbstractThe key 3-(2-oxo-2H-chromen-3-yl)-2-oxo-2H,5H-pyrano[3,2-c]chromen-5-yl acetates 3 were synthesized in high yields by cyclocondensation of 4-oxo-4H-chromen-3-carbaldehydes 1 with coumarin-3-acetic acids 2 under mild conditions. The reaction pathway involves aldol condensation and subsequent intramolecular lactonization to afford 2-oxo-2H,5H-pyrano[3,2-c]chromene skeleton 3. Further treatment of acetates 3 with alcohols, water or nitrogen containing compounds led to 5-alkoxy-, 5-hydroxy- or 5-acylamino-2H,5H-pyrano[3,2-c]chromen-2-ones 4-6 via nucleophilic substitution of acetyloxy group at C-5. Acetates and hydroxyl derivatives 3 and 5 undergo facile rearrangement in an acid medium yielding 5-hydroxypyrano[2,3-b]chromen-2(10aH)-ones 7. Twelve prepared compounds were evaluated on their antineoplastic activities on 60 human tumour cell line panels in NCI USA. The obtained biological results confirmed that 3-(2-oxo-2H-chromen-3-yl)-2H,5H-pyrano[3,2-c]chromen-2-one represents a new leading skeleton suitable for further antitumour activity study.
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Li Z, Ke F, Deng H, Xu H, Xiang H, Zhou X. Synthesis of disulfides and diselenides by copper-catalyzed coupling reactions in water. Org Biomol Chem 2013; 11:2943-6. [DOI: 10.1039/c3ob40464a] [Citation(s) in RCA: 72] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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El-Shaaer HM, Ibrahim SS, Abd-Elmonem WR, Ibrahim CG. An efficient cyclocondensation reactions, antimicrobial activity and molecular orbital calculations of α-benzopyrone derivatives. EUROPEAN JOURNAL OF CHEMISTRY 2012; 3:172-178. [DOI: 10.5155/eurjchem.3.2.172-178.582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
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Plaskon AS, Grygorenko OO, Ryabukhin SV. Recyclizations of 3-formylchromones with binucleophiles. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.01.077] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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Wang X, Lu G, Yan F, Ma W, Wu L. Zr(HSO4)4-catalyzed one-pot three-component synthesis of 7-alkyl-6H,7H-naphtho[1′,2′:5,6]pyrano[3,2-c]chromen-6-ones. J Heterocycl Chem 2011. [DOI: 10.1002/jhet.755] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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El-Shaaer HM, Abdel-Aziz SAG, Hanafy FI, Ali TES, El-Fauomy AZ. Synthesis, antifungal activity and semi-empirical AM1-MO calculations of some new 4-oxo-4H-chromene derivatives. ACTA ACUST UNITED AC 2011. [DOI: 10.5155/eurjchem.2.2.158-162.381] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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15
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Raju BC, Rao RN, Suman P, Yogeeswari P, Sriram D, Shaik TB, Kalivendi SV. Synthesis, structure–activity relationship of novel substituted 4H-chromen-1,2,3,4-tetrahydropyrimidine-5-carboxylates as potential anti-mycobacterial and anticancer agents. Bioorg Med Chem Lett 2011; 21:2855-9. [PMID: 21507635 DOI: 10.1016/j.bmcl.2011.03.079] [Citation(s) in RCA: 84] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2010] [Revised: 03/09/2011] [Accepted: 03/23/2011] [Indexed: 11/17/2022]
Affiliation(s)
- B China Raju
- Organic Chemistry Division-1, Indian Institute of Chemical Technology, Hyderabad 500 607, India.
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Highly efficient three-component, one-pot synthesis of dihydropyrano[3,2-c]chromene derivatives. MONATSHEFTE FUR CHEMIE 2010. [DOI: 10.1007/s00706-010-0383-4] [Citation(s) in RCA: 68] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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