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Sharma S, Ali ME. Nonreductive homolytic scission of endoperoxide bond for activation of artemisinin: A parallel mechanism to Heterolytic cleavage. J PHYS ORG CHEM 2022. [DOI: 10.1002/poc.4392] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Shikha Sharma
- Institute of Nano Science and Technology Knowledge City India
| | - Md. Ehesan Ali
- Institute of Nano Science and Technology Knowledge City India
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2
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Mn(III)-catalyzed aerobic oxidation of 2-alkenyl-1,3-diketone enols. Synthesis of 1,2-dioxin-3-ols and natural phytohormone G factors. Tetrahedron 2022. [DOI: 10.1016/j.tet.2022.132631] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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3
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André-Barrès C, Carissan Y, Tuccio B. Theoretical Studies of Autoxidation of 2-Alkylidene-1,3-cyclohexadione Leading to Bicyclic-Hemiketal Endoperoxides. ACS OMEGA 2017; 2:5357-5363. [PMID: 31457804 PMCID: PMC6644581 DOI: 10.1021/acsomega.7b00989] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/13/2017] [Accepted: 08/18/2017] [Indexed: 06/10/2023]
Abstract
Mechanism of the addition of molecular oxygen on the dienolic form of the 2-alkylidene-1,3-cyclohexadione was investigated by quantum chemical calculations using the approximate projection method developed by Yamaguchi. The complete reaction pathway of the formation of the endoperoxide is described. The crossing between triplet and singlet potential energy surfaces has been located. A multireference complete active space self-consistent field calculation has been performed to strengthen the results.
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Affiliation(s)
- Christiane André-Barrès
- LSPCMIB,
UPS, CNRS, UMR 5068, Université de Toulouse, 118 route de Narbonne, 31062 Toulouse cedex 9, France
- Laboratoire
de Synthèse et Physicochimie de Molécules d’Intérêt
Biologique, CNRS, UMR 5068, 31062 Toulouse, France
| | - Yannick Carissan
- iSm2, Centrale Marseille and ICR, Aix Marseille
Université, CNRS, 13397 Marseille, France
| | - Béatrice Tuccio
- iSm2, Centrale Marseille and ICR, Aix Marseille
Université, CNRS, 13397 Marseille, France
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4
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Tcherkez G. The mechanism of Rubisco-catalysed oxygenation. PLANT, CELL & ENVIRONMENT 2016; 39:983-997. [PMID: 26286702 DOI: 10.1111/pce.12629] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2015] [Revised: 07/28/2015] [Accepted: 08/09/2015] [Indexed: 06/04/2023]
Abstract
Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) is the cornerstone of photosynthetic carbon assimilation because it catalyses the fixation of CO2 onto ribulose-1,5-bisphosphate (RuBP). The enzyme also catalyses RuBP oxygenation, thereby evolving phosphoglycolate which is recycled along the photorespiratory pathway. Oxygenation is quantitatively important, because under ordinary gaseous conditions, more than one third of RuBP molecules are oxygenated rather than carboxylated. However, contrary to carboxylation, the chemical mechanism of oxygenation is not well known, and little progress has been made since the early 80s. Here, I review recent experimental data that provide some new insights into the reaction mechanism, and carry out simple calculations of kinetic parameters. Isotope effects suggest that oxygenation is less likely initiated by a redox phenomenon (such as superoxide production) and more likely involves concerted chemical events that imply interactions with protons. A possible energy profile of the reaction is drawn which suggests that the generation of the oxygenated reaction intermediate (peroxide) is irreversible. Possible changes in oxygenation-associated rate constants between Rubisco forms are discussed.
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Affiliation(s)
- Guillaume Tcherkez
- Research School of Biology, ANU College of Medicine, Biology and Environment, Australian National University, Canberra, 2601, ACT, Australia
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5
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Sasaki M, Ando M, Kawahata M, Yamaguchi K, Takeda K. Spontaneous Oxygenation of Siloxy-N-silylketenimines to α-Ketoamides. Org Lett 2016; 18:1598-601. [PMID: 26986936 DOI: 10.1021/acs.orglett.6b00455] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Siloxy-N-silylketenimines generated in situ from O-silyl cyanohydrins were converted to α-ketoamides by brief exposure to air or oxygen. Oxidation under extremely mild conditions can be explained by assuming the intermediacy of a 3-imino-1,2-dioxetane derivative generated via triplet-singlet intersystem crossing after the reaction of siloxy-N-silylketenimines with triplet oxygen.
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Affiliation(s)
- Michiko Sasaki
- Department of Synthetic Organic Chemistry, Institute of Biomedical & Health Sciences, Hiroshima University , 1-2-3 Kasumi, Minami-Ku, Hiroshima 734-8553, Japan
| | - Masafumi Ando
- Department of Synthetic Organic Chemistry, Institute of Biomedical & Health Sciences, Hiroshima University , 1-2-3 Kasumi, Minami-Ku, Hiroshima 734-8553, Japan
| | - Masatoshi Kawahata
- Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University , 1314-1 Shido, Sanuki, Kagawa 769-2193, Japan
| | - Kentaro Yamaguchi
- Pharmaceutical Sciences at Kagawa Campus, Tokushima Bunri University , 1314-1 Shido, Sanuki, Kagawa 769-2193, Japan
| | - Kei Takeda
- Department of Synthetic Organic Chemistry, Institute of Biomedical & Health Sciences, Hiroshima University , 1-2-3 Kasumi, Minami-Ku, Hiroshima 734-8553, Japan
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6
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Gervais A, Lazarski KE, Porco JA. Divergent Total Syntheses of Rhodomyrtosones A and B. J Org Chem 2016; 80:9584-91. [PMID: 26351970 DOI: 10.1021/acs.joc.5b01570] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Herein, we report total syntheses of the tetramethyldihydroxanthene natural product rhodomyrtosone B and the related bis-furan β-triketone natural product rhodomyrtosone A. Nickel-(II)-catalyzed 1,4-conjugate addition of an α-alkylidene-β-dicarbonyl substrate was developed to access the congener rhodomyrtosone B, and oxygenation of the same monoalkylidene derivative followed by cyclization was employed to obtain the bis-furan natural product rhodomyrtosone A.
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Affiliation(s)
- Anais Gervais
- Department of Chemistry, Center for Molecular Discovery (BU-CMD), Boston University , 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States
| | - Kiel E Lazarski
- Department of Chemistry, Center for Molecular Discovery (BU-CMD), Boston University , 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States
| | - John A Porco
- Department of Chemistry, Center for Molecular Discovery (BU-CMD), Boston University , 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States
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8
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Synthesis and antiplasmodial evaluation of cyclopropyl analogs of the G-factor bicyclic peroxide. Tetrahedron 2013. [DOI: 10.1016/j.tet.2013.05.099] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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9
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Abstract
We describe herein the synthesis of a late-stage intermediate en route to cortistatin A. Key transformations included a Snieckus-like cascade sequence culminating in a 6π-electrocyclization, an alkylative dearomatization, and the stereoselective functionalization of the cortistatin A-ring. While the total synthesis we sought was not accomplished, the work sets the stage for several approaches to the preparation of novel analogs via diverted total synthesis.
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Affiliation(s)
- Zhang Wang
- Department of Chemistry, Columbia University, Havemeyer Hall, 3000 Broadway, New York, NY 10027
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10
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Kholdeeva OA, Ivanchikova ID, Zalomaeva OV, Sorokin AB, Skobelev IY, Talsi EP. Mechanistic Insights into Oxidation of 2-Methyl-1-naphthol with Dioxygen: Autoxidation or a Spin-Forbidden Reaction? J Phys Chem B 2011; 115:11971-83. [DOI: 10.1021/jp2055975] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Oxana A. Kholdeeva
- Boreskov Institute of Catalysis, Lavrentiev Avenue 5, Novosibirsk, 630090, Russia
| | - Irina D. Ivanchikova
- Boreskov Institute of Catalysis, Lavrentiev Avenue 5, Novosibirsk, 630090, Russia
| | - Olga V. Zalomaeva
- Boreskov Institute of Catalysis, Lavrentiev Avenue 5, Novosibirsk, 630090, Russia
| | - Alexander B. Sorokin
- Institut de Recherches sur la Catalyse, CNRS, 2, Avenue A. Einstein, 69626 Villeurbanne Cedex, France
| | - Igor Y. Skobelev
- Boreskov Institute of Catalysis, Lavrentiev Avenue 5, Novosibirsk, 630090, Russia
| | - Eugenii P. Talsi
- Boreskov Institute of Catalysis, Lavrentiev Avenue 5, Novosibirsk, 630090, Russia
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Lauricella R, Triquigneaux M, André-Barrès C, Charles L, Tuccio B. 5-Hydroxy-2,2,6,6-tetramethyl-4-(2-methylprop-1-en-yl)cyclohex-4-ene-1,3-dione, a novel cheletropic trap for nitric oxide EPR detection. Chem Commun (Camb) 2010; 46:3675-7. [DOI: 10.1039/c002990d] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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13
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Triquigneaux M, Charles L, André-Barrès C, Tuccio B. A combined spin trapping/EPR/mass spectrometry approach to study the formation of a cyclic peroxide by dienolic precursor autoxidation. Org Biomol Chem 2010; 8:1361-7. [DOI: 10.1039/b921694d] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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14
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Bernat V, Saffon N, Maynadier M, Vial H, André-Barrès C. α-Spiro endoperoxides: synthesis and evaluation of their antimalarial activities. Tetrahedron 2009. [DOI: 10.1016/j.tet.2009.07.030] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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15
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Boag NM, Rao KM. Activation of metal-bound η5-C5Me5 groups to Diels–Alder addition of 3O2 and other dienophiles. Chem Commun (Camb) 2009:1499-501. [DOI: 10.1039/b818537a] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Bernat V, Coste M, André-Barrès C. Autoxidation of 2-alkylidene-1,3-cyclohexanediones as a green process to form bicyclic hemiketal endoperoxides. NEW J CHEM 2009. [DOI: 10.1039/b9nj00398c] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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17
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Bernat V, André-Barrès C, Baltas M, Saffon N, Vial H. Synthesis of antimalarial G-factors endoperoxides: relevant evidence of the formation of a biradical during the autoxidation step. Tetrahedron 2008. [DOI: 10.1016/j.tet.2008.07.047] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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18
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Bernat V, André C, André-Barrès C. Weak chemiluminescence emission during base induced rearrangement of G-factors. Org Biomol Chem 2008; 6:454-7. [PMID: 18219413 DOI: 10.1039/b715491g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A rearrangement in basic medium of the natural endoperoxide G3-factor extracted from Eucalyptus grandis is described. Evidence to support a 1,2-dioxetane intermediate that decomposes with weak luminescence emission (quantum yield) is presented.
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Affiliation(s)
- Virginie Bernat
- Laboratoire de Synthèse et de Physicochimie de Molécules d'Intérêt Biologique, UMR CNRS 5068, Université Paul-Sabatier, 118 route de Narbonne, F-31062 Toulouse cedex 04, France
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Givelet C, Bernat V, Danel M, André-Barrès C, Vial H. New Amino Endoperoxides Belonging to the Antimalarial G-Factor Series. European J Org Chem 2007. [DOI: 10.1002/ejoc.200700086] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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20
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Rostami A, Wang Y, Arif AM, McDonald R, West FG. Intramolecular azide trapping of the Nazarov intermediate: formation of peroxy-bridged indolizidinones via a deep-seated rearrangement and aerobic oxidation. Org Lett 2007; 9:703-6. [PMID: 17256871 PMCID: PMC2530911 DOI: 10.1021/ol070053m] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Cross-conjugated dienones with pendent azide side chains undergo interrupted Nazarov trapping, leading to peroxy-bridged indolizidinones in good yields. This process is proposed to involve skeletal rearrangement of the initial trapping product, with loss of dinitrogen, to give an intermediate 1,4-betaine, which then undergoes reaction with atmospheric oxygen. The endoperoxide products can be reduced under catalytic hydrogenation conditions to furnish alpha-hydroxylactams. [reaction: see text].
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Bäcktorp C, Wass JRTJ, Panas I, Sköld M, Börje A, Nyman G. Theoretical Investigation of Linalool Oxidation. J Phys Chem A 2006; 110:12204-12. [PMID: 17078616 DOI: 10.1021/jp0603278] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
This study concerns the autoxidation of one of the most used fragrances in daily life, linalool (3,7-dimethyl-1,6-octadien-3-ol). It reacts with O2 to form hydroperoxides, which are known to be important contact allergens. Pathways for hydroperoxide formation are investigated by means of quantum mechanical electronic structure calculations. Optimized molecular geometries and harmonic vibrational frequencies are determined using density functional theory (DFT). Insight into how the addition of O2 to linalool occurs is obtained by establishing a theoretical framework and systematically investigating three smaller systems: propene, 2-methyl-2-butene, and 2-methyl-2-pentene. 2-Methyl-2-pentene was chosen as a model system and used to compare with linalool. This theoretical study characterizes the linalool-O2 biradical intermediate state, which constitutes a branching point for the further oxidation reactions pathways. Thus, the observed linalool oxidation product spectrum is discussed in terms of a direct reaction path, the ene-type mechanism, and the radical mechanism. The major hydroperoxide found in experiments is 7-hydroperoxy-3,7-dimethyl-octa-1,5-diene-3-ol, and the calculated results support this finding.
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Affiliation(s)
- Carina Bäcktorp
- Department of Chemistry, Physical Chemistry, Electrochemistry, Dermatochemistry and Skin Allergy, Göteborg University, SE-412 96 Göteborg, Sweden.
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