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Farkas D, Dobránszki J. Vegetal memory through the lens of transcriptomic changes - recent progress and future practical prospects for exploiting plant transcriptional memory. PLANT SIGNALING & BEHAVIOR 2024; 19:2383515. [PMID: 39077764 PMCID: PMC11290777 DOI: 10.1080/15592324.2024.2383515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2024] [Revised: 07/12/2024] [Accepted: 07/15/2024] [Indexed: 07/31/2024]
Abstract
Plant memory plays an important role in the efficient and rapid acclimation to a swiftly changing environment. In addition, since plant memory can be inherited, it is also of adaptive and evolutionary importance. The ability of a plant to store, retain, retrieve and delete information on acquired experience is based on cellular, biochemical and molecular networks in the plants. This review offers an up-to-date overview on the formation, types, checkpoints of plant memory based on our current knowledge and focusing on its transcriptional aspects, the transcriptional memory. Roles of long and small non-coding RNAs are summarized in the regulation, formation and the cooperation between the different layers of the plant memory, i.e. in the establishment of epigenetic changes associated with memory formation in plants. The RNA interference mechanisms at the RNA and DNA level and the interplays between them are also presented. Furthermore, this review gives an insight of how exploitation of plant transcriptional memory may provide new opportunities for elaborating promising cost-efficient, and effective strategies to cope with the ever-changing environmental perturbations, caused by climate change. The potentials of plant memory-based methods, such as crop priming, cross acclimatization, memory modification by miRNAs and associative use of plant memory, in the future's agriculture are also discussed.
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Affiliation(s)
- Dóra Farkas
- Centre for Agricultural Genomics and Biotechnology, Faculty of the Agricultural and Food Science and Environmental Management, University of Debrecen, Nyíregyháza, Hungary
| | - Judit Dobránszki
- Centre for Agricultural Genomics and Biotechnology, Faculty of the Agricultural and Food Science and Environmental Management, University of Debrecen, Nyíregyháza, Hungary
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Bulgakov VP, Fialko AV, Yugay YA. Involvement of epigenetic factors in flavonoid accumulation during plant cold adaptation. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 216:109096. [PMID: 39250844 DOI: 10.1016/j.plaphy.2024.109096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2024] [Revised: 08/26/2024] [Accepted: 09/03/2024] [Indexed: 09/11/2024]
Abstract
Plant responses to cold stress include either induction of flavonoid biosynthesis as part of defense responses or initially elevated levels of these substances to mitigate sudden temperature fluctuations. The role of chromatin modifying factors and, in general, epigenetic variability in these processes is not entirely clear. In this work, we review the literature to establish the relationship between flavonoids, cold and chromatin modifications. We demonstrate the relationship between cold acclimation and flavonoid accumulation, and then describe the cold adaptation signaling pathways and their relationship with chromatin modifying factors. Particular attention was paid to the cold signaling module OST1-HOS1-ICE1 and the novel function of the E3 ubiquitin protein ligase HOS1 (a protein involved in chromatin modification during cold stress) in flavonoid regulation.
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Affiliation(s)
- Victor P Bulgakov
- Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch of the Russian Academy of Sciences, 159 Stoletija Str., Vladivostok, 690022, Russia; Institute of Automation and Control Processes, Far Eastern Branch of the Russian Academy of Sciences, 5 Radio Str., Vladivostok, 690041, Russia.
| | - Alexandra V Fialko
- Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch of the Russian Academy of Sciences, 159 Stoletija Str., Vladivostok, 690022, Russia; Institute of Automation and Control Processes, Far Eastern Branch of the Russian Academy of Sciences, 5 Radio Str., Vladivostok, 690041, Russia
| | - Yulia A Yugay
- Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch of the Russian Academy of Sciences, 159 Stoletija Str., Vladivostok, 690022, Russia
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Gill SS, Khan NA, Agarwala N, Singh K, Sunkar R, Tuteja N. ncRNAs in plant development and stress responses. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 214:108950. [PMID: 39034172 DOI: 10.1016/j.plaphy.2024.108950] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/23/2024]
Affiliation(s)
- Sarvajeet Singh Gill
- Stress Physiology and Molecular Biology Lab, Centre for Biotechnology, Maharshi Dayanand University, Rohtak, 124 001, Haryana, India.
| | - Nafees A Khan
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Aligarh Muslim University, Aligarh, 202002, India.
| | - Niraj Agarwala
- Department of Botany, Gauhati University, Gopinath Bordoloi Nagar, Guwahati, Assam, 781014, India.
| | - Kashmir Singh
- Department of Biotechnology, Panjab University, Chandigarh, India.
| | - Ramanjulu Sunkar
- Department of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK, 74078, USA.
| | - Narendra Tuteja
- Plant Molecular Biology Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
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Mardani-Korrani F, Amooaghaie R, Ahadi A, Ghanadian M. RBOH-dependent signaling is involved in He-Ne laser-induced salt tolerance and production of rosmarinic acid and carnosol in Salvia officinalis. BMC PLANT BIOLOGY 2024; 24:798. [PMID: 39179969 PMCID: PMC11344448 DOI: 10.1186/s12870-024-05502-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Accepted: 08/12/2024] [Indexed: 08/26/2024]
Abstract
BACKGROUND In the past two decades, the impacts of Helium-Neon (He-Ne) laser on stress resistance and secondary metabolism in plants have been studied, but the signaling pathway which by laser regulates this process remains unclear. Therefore, the current study sought to explore the role of RBOH-dependent signaling in He-Ne laser-induced salt tolerance and elicitation of secondary metabolism in Salvia officinalis. Seeds were primed with He-Ne laser (6 J cm- 2) and peroxide hydrogen (H2O2, 5 mM) and 15-old-day plants were exposed to two salinity levels (0, 75 mM NaCl). RESULTS Salt stress reduced growth parameters, chlorophyll content and relative water content (RWC) and increased malodialdehyde (MDA) and H2O2 contents in leaves of 45-old-day plants. After 48 h of salt exposure, higher transcription levels of RBOH (encoding NADPH oxidase), PAL (phenylalanine ammonia-lyase), and RAS (rosmarinic acid synthase) were recorded in leaves of plants grown from seeds primed with He-Ne laser and/or H2O2. Despite laser up-regulated RBOH gene in the early hours of exposing to salinity, H2O2 and MDA contents were lower in leaves of these plants after 30 days. Seed pretreatment with He-Ne laser and/or H2O2 augmented the accumulation of anthocyanins, total phenol, carnasol, and rosmarinic acid and increased total antioxidant capacity under non-saline and more extensively at saline conditions. Indeed, these treatments improved RWC, and K+/Na+ ratio, enhanced the activities of superoxide dismutase and ascorbate peroxidase and proline accumulation, and significantly decreased membrane injury and H2O2 content in leaves of 45-old-day plants under salt stress. However, applying diphenylene iodonium (DPI as an inhibitor of NADPH oxidase) and N, N-dimethyl thiourea (DMTU as a H2O2 scavenger) after laser priming reversed the aforementioned effects which in turn resulted in the loss of laser-induced salt tolerance and secondary metabolism. CONCLUSIONS These findings for the first time deciphered that laser can induce a transient RBOH-dependent H2O2 burst, which might act as a downstream signal to promote secondary metabolism and salt stress alleviation in S. officinalis plants.
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Affiliation(s)
| | - Rayhaneh Amooaghaie
- Plant Science Department, Science Faculty, Shahrekord University, Shahrekord, Iran.
- Biotechnology Research Institute, Shahrekord University, Shahrekord, Iran.
| | - Alimohammad Ahadi
- Genetic Department, Science Faculty, Shahrekord University, Shahrekord, Iran
| | - Mustafa Ghanadian
- Pharmacognosy Department, Isfahan Pharmaceutical Sciences Research Center, Isfahan University of Medical Sciences, Isfahan, Iran
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Permana BH, Krobthong S, Yingchutrakul Y, Thiravetyan P, Treesubsuntorn C. Sansevieria trifasciata's specific metabolite improves tolerance and efficiency for particulate matter and volatile organic compound removal. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 355:124199. [PMID: 38788990 DOI: 10.1016/j.envpol.2024.124199] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 04/23/2024] [Accepted: 05/17/2024] [Indexed: 05/26/2024]
Abstract
Phytoremediation has become famous for removing particulate matter (PM) and volatile organic compounds (VOCs), but the ability is affected by plant health. Lately, the priming technique was a simple approach to studying improving plant tolerance against abiotic stress by specific metabolites that accumulated, known as "memory", but the mechanism underlying this mechanism and how long this "memory" was retained in the plant was a lack of study. Sansevieria trifasciata was primed for one week for PM and VOC stress to improve plant efficiency on PM and VOC. After that, the plant was recovered for two- or five-weeks, then re-exposed to the same stress with similar PM and VOC concentrations from cigarette smoke. Primed S. trifasciata showed improved removal of PMs entirely within 2 h and VOC within 24 h. The primed plant can maintain a malondialdehyde (MDA) level and retain the "memory" for two weeks. Metabolomics analysis showed that an ornithine-related compound was accumulated as a responsive metabolite under exposure to PM and VOC stress. Exogenous ornithine can maintain plant efficiency and prevent stress by increasing proline and antioxidant enzymes. This study is the first to demonstrate plant "memory" mechanisms under PM and VOC stress.
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Affiliation(s)
- Bayu Hadi Permana
- School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok, 10150, Thailand
| | - Sucheewin Krobthong
- Interdisciplinary Graduate Program in Genetic Engineering, Kasetsart University, Bangkok, 10900, Thailand
| | - Yodying Yingchutrakul
- Proteomics Research Team, National Omics Center, NSTDA, Pathum Thani, 12120, Thailand
| | - Paitip Thiravetyan
- School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok, 10150, Thailand
| | - Chairat Treesubsuntorn
- School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bangkok, 10150, Thailand.
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Bester AU, Shimoia EP, Da-Silva CJ, Posso DA, Carvalho IR, Corrêa FM, de Oliveira ACB, do Amarante L. Enhancing stress resilience in soybeans ( Glycine max): assessing the efficacy of priming and cross-priming for mitigating water deficit and waterlogging effects. FUNCTIONAL PLANT BIOLOGY : FPB 2024; 51:FP24064. [PMID: 39163496 DOI: 10.1071/fp24064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 07/31/2024] [Indexed: 08/22/2024]
Abstract
Priming enables plants to respond more promptly, minimise damage, and survive subsequent stress events. Here, we aimed to assess the efficacy of priming and cross-priming in mitigating the stress caused by waterlogging and/or dehydration in soybeans (Glycine max ). Soybean plants were cultivated in a greenhouse in plastic pots in which soil moisture was maintained at pot capacity through irrigation. The first stress was applied in plants at the vegetative stage for 5days and involved either dehydration or waterlogging, depending on the treatment. Subsequently, the plants were irrigated or drained and maintained at pot capacity until the second stress. For the second stress, the conditions were repeated in plants at the reproductive stage. We then evaluated the levels of hydrogen peroxide (H2 O2 ), lipid peroxidation, total soluble sugars (TSS), amino acids, proline, and starch, and the activity of antioxidant, fermentative, and aminotransferase enzymes. Under waterlogging and dehydration, priming and cross-priming significantly increased the activity of antioxidant enzymes and the levels of TSS, amino acids, and proline while reducing H2 O2 concentration and lipid peroxidation. Under waterlogging, priming suppressed fermentative activity and increased carbohydrate content. This demonstrates that soybean plants activate their defence systems more promptly when subjected to priming.
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Affiliation(s)
- Adriano U Bester
- Departamento de Botânica, Universidade Federal de Pelotas, Capão do Leão 96160-000, Brazil
| | - Eduardo P Shimoia
- Departamento de Botânica, Universidade Federal de Pelotas, Capão do Leão 96160-000, Brazil
| | - Cristiane J Da-Silva
- Departamento de Botânica, Universidade Federal de Pelotas, Capão do Leão 96160-000, Brazil
| | - Douglas A Posso
- Departamento de Botânica, Universidade Federal de Pelotas, Capão do Leão 96160-000, Brazil
| | - Ivan R Carvalho
- Departamento de Estudos Agrários, Universidade Regional do Noroeste do Estado do Rio Grande do Sul, Ijuí 97800-000, Brazil
| | - Fernanda M Corrêa
- Departamento de Botânica, Universidade Federal de Pelotas, Capão do Leão 96160-000, Brazil
| | - Ana C B de Oliveira
- Empresa Brasileira de Pesquisa Agropecuária, Embrapa Clima Temperado, Pelotas 96010-971, Brazil
| | - Luciano do Amarante
- Departamento de Botânica, Universidade Federal de Pelotas, Capão do Leão 96160-000, Brazil
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Tripathi DK, Bhat JA, Antoniou C, Kandhol N, Singh VP, Fernie AR, Fotopoulos V. Redox Regulation by Priming Agents Toward a Sustainable Agriculture. PLANT & CELL PHYSIOLOGY 2024; 65:1087-1102. [PMID: 38591871 PMCID: PMC11287215 DOI: 10.1093/pcp/pcae031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Accepted: 03/21/2024] [Indexed: 04/10/2024]
Abstract
Plants are sessile organisms that are often subjected to a multitude of environmental stresses, with the occurrence of these events being further intensified by global climate change. Crop species therefore require specific adaptations to tolerate climatic variability for sustainable food production. Plant stress results in excess accumulation of reactive oxygen species leading to oxidative stress and loss of cellular redox balance in the plant cells. Moreover, enhancement of cellular oxidation as well as oxidative signals has been recently recognized as crucial players in plant growth regulation under stress conditions. Multiple roles of redox regulation in crop production have been well documented, and major emphasis has focused on key redox-regulated proteins and non-protein molecules, such as NAD(P)H, glutathione, peroxiredoxins, glutaredoxins, ascorbate, thioredoxins and reduced ferredoxin. These have been widely implicated in the regulation of (epi)genetic factors modulating growth and health of crop plants, with an agricultural context. In this regard, priming with the employment of chemical and biological agents has emerged as a fascinating approach to improve plant tolerance against various abiotic and biotic stressors. Priming in plants is a physiological process, where prior exposure to specific stressors induces a state of heightened alertness, enabling a more rapid and effective defense response upon subsequent encounters with similar challenges. Priming is reported to play a crucial role in the modulation of cellular redox homeostasis, maximizing crop productivity under stress conditions and thus achieving yield security. By taking this into consideration, the present review is an up-to-date critical evaluation of promising plant priming technologies and their role in the regulation of redox components toward enhanced plant adaptations to extreme unfavorable environmental conditions. The challenges and opportunities of plant priming are discussed, with an aim of encouraging future research in this field toward effective application of priming in stress management in crops including horticultural species.
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Affiliation(s)
- Durgesh Kumar Tripathi
- Crop Nano Biology and Molecular Stress Physiology Lab, Amity Institute of Organic Agriculture, Amity University Uttar Pradesh, AUUP Campus Sector-125, Noida 201313, India
| | | | - Chrystalla Antoniou
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology, Limassol 3036, Cyprus
| | - Nidhi Kandhol
- Crop Nano Biology and Molecular Stress Physiology Lab, Amity Institute of Organic Agriculture, Amity University Uttar Pradesh, AUUP Campus Sector-125, Noida 201313, India
| | - Vijay Pratap Singh
- Plant Physiology Laboratory, Department of Botany, C.M.P. Degree College, A Constituent Post Graduate College of University of Allahabad, Prayagraj 211002, India
| | - Alisdair R Fernie
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, Potsdam-Golm 14476, Germany
| | - Vasileios Fotopoulos
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology, Limassol 3036, Cyprus
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Kalisz A, Kornaś A, Gil J, Rudolphi-Szydło E, Gawrońska K, Sieprawska A, Jafari H, Mahdavinia GR, Kulak M, Gohari G, Fotopoulos V. Foliar spraying with amino acids and their chitosan nanocomposites as promising way to alleviate abiotic stress in iceberg lettuce grown at different temperatures. Sci Rep 2024; 14:17208. [PMID: 39060430 PMCID: PMC11282281 DOI: 10.1038/s41598-024-68005-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Accepted: 07/18/2024] [Indexed: 07/28/2024] Open
Abstract
We analyzed the effects of foliar spraying with amino acids, chitosan (CHS) and nanocomposites (NCs) of chitosan with the amino acids proline, L-cysteine and glycine betaine (CHS-Pro NCs; CHS-Cys NCs, CHS-GB NCs, respectively) on the changes in the physiological and biochemical parameters of iceberg lettuce grown at the control temperature (20 °C) and under chilling conditions (4 °C). The physicochemical parameters of the phospholipid monolayers (PLs) extracted from plants showed the effects of the treatments on the properties of the monolayers, namely, the packing density and flexibility. We observed increased accumulation of proline at 4 °C, and differences in the concentrations of sugars in most of the analyzed variants were a consequence of the lowered temperature and/or the use of organic compounds. A temperature of 4 °C caused a significant increase in the L-ascorbic acid level compared with that at 20 °C. Differences were also found in glutathione (GSH) content depending on the temperature and treatment with the tested organic compounds. CHS NCs loaded with Pro and GB were effective at increasing the amount of phenols under stress temperature conditions. We noted that a significant increase in the antioxidant activity of plants at 4 °C occurred after priming with Cys, CHS-Cys NCs, Pro and CHS-Pro NCs, and the CHS nanocomposites were more effective in this respect. Both low-temperature stress and foliar spraying of lettuce with various organic compounds caused changes in the activity of antioxidant enzymes. Two forms of dismutase (SOD), iron superoxide dismutase (FeSOD) and copper/zinc superoxide dismutase (Cu/ZnSOD), were identified in extracts from the leaves of iceberg lettuce seedlings. The application of the tested organic compounds, alone or in combination with CHS, increased the amount of malondialdehyde (MDA) in plants grown under controlled temperature conditions. Chilling caused an increase in the content of MDA, but some organic compounds mitigated the impact of low temperature. Compared with that of plants subjected to 20 °C, the fresh weight of plants exposed to chilling decreased. However, the tested compounds caused a decrease in fresh weight at 4 °C compared with the corresponding control samples. An interesting exception was the use of Cys, for which the difference in the fresh weight of plants grown at 20 °C and 4 °C was not statistically significant. After Cys application, the dry weight of the chilled plants was greater than that of the chilled control plants but was also greater than that of the other treated plants in this group. To our knowledge, this is the first report demonstrating that engineered chitosan-amino acid nanocomposites could be applied as innovative protective agents to mitigate the effects of chilling stress in crop plants.
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Affiliation(s)
- Andrzej Kalisz
- Department of Horticulture, University of Agriculture in Krakow, 29 Listopada 54, 31-425, Kraków, Poland.
| | - Andrzej Kornaś
- Institute of Biology and Earth Sciences, University of the National Education Commission, Krakow, Podchorążych 2, 30-084, Kraków, Poland.
| | - Joanna Gil
- Department of Horticulture, University of Agriculture in Krakow, 29 Listopada 54, 31-425, Kraków, Poland
| | - Elżbieta Rudolphi-Szydło
- Institute of Biology and Earth Sciences, University of the National Education Commission, Krakow, Podchorążych 2, 30-084, Kraków, Poland
| | - Katarzyna Gawrońska
- Institute of Biology and Earth Sciences, University of the National Education Commission, Krakow, Podchorążych 2, 30-084, Kraków, Poland
| | - Apolonia Sieprawska
- Institute of Biology and Earth Sciences, University of the National Education Commission, Krakow, Podchorążych 2, 30-084, Kraków, Poland
| | - Hessam Jafari
- Polymer Research Laboratory, Department of Chemistry, Faculty of Science, University of Maragheh, Maragheh, Iran
| | - Gholam Reza Mahdavinia
- Polymer Research Laboratory, Department of Chemistry, Faculty of Science, University of Maragheh, Maragheh, Iran
| | - Muhittin Kulak
- Department of Herbal and Animal Production, Vocational School of Technical Sciences, Igdir University, Iğdır, Turkey
| | - Gholamreza Gohari
- Department of Horticulture, Faculty of Agriculture, University of Maragheh, Maragheh, Iran
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology, Limassol, Cyprus
| | - Vasileios Fotopoulos
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology, Limassol, Cyprus
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Körner T, Zinkernagel J, Röhlen-Schmittgen S. Thermopriming Induces Time-Limited Tolerance to Salt Stress. Int J Mol Sci 2024; 25:7698. [PMID: 39062938 PMCID: PMC11277441 DOI: 10.3390/ijms25147698] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2024] [Revised: 07/07/2024] [Accepted: 07/10/2024] [Indexed: 07/28/2024] Open
Abstract
Implementing sustainable crop protection practices is crucial to protect global harvests and ensure high-quality food supplies. While priming is an established method in seed production for the fortification of plants against various stresses, it is not yet a standard practice in transplant cultivation. Thus, we evaluated the long-term effects of thermopriming-a heat-based priming technique-on the growth, development, and fruit yield of tomato plants. Following a recovery period of about six weeks for thermoprimed plants without stress inducers, we subjected them to subsequent salt stress to ascertain the persistence of the priming effects. Additionally, we compared the efficacy of thermopriming with benzothiadiazole (BTH), a chemical elicitor, in enhancing plant resilience to abiotic stress. While BTH application negatively impacted both plant growth and fruit health, thermopriming showed no such adverse effects on these parameters. Instead, thermopriming initially enhanced the plant defense mechanisms by increasing the accumulation of protective phenols and flavonoids in the leaves. Interestingly, while thermopriming did not alter the response to salt stress, it notably strengthened the overall resilience of the plants. Our findings underscore both the potential and temporal constraints of thermopriming memory. Nonetheless, primed plants exhibited temporarily increased stress tolerance, offering a means to safeguard the offspring.
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Affiliation(s)
| | | | - Simone Röhlen-Schmittgen
- Department of Vegetable Crops, Hochschule Geisenheim University, 65366 Geisenheim, Germany; (T.K.)
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Réthoré E, Pelletier S, Balliau T, Zivy M, Avelange-Macherel MH, Macherel D. Multi-scale analysis of heat stress acclimation in Arabidopsis seedlings highlights the primordial contribution of energy-transducing organelles. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 119:300-331. [PMID: 38613336 DOI: 10.1111/tpj.16763] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 03/08/2024] [Accepted: 03/14/2024] [Indexed: 04/14/2024]
Abstract
Much progress has been made in understanding the molecular mechanisms of plant adaptation to heat stress. However, the great diversity of models and stress conditions, and the fact that analyses are often limited to a small number of approaches, complicate the picture. We took advantage of a liquid culture system in which Arabidopsis seedlings are arrested in their development, thus avoiding interference with development and drought stress responses, to investigate through an integrative approach seedlings' global response to heat stress and acclimation. Seedlings perfectly tolerate a noxious heat shock (43°C) when subjected to a heat priming treatment at a lower temperature (38°C) the day before, displaying a thermotolerance comparable to that previously observed for Arabidopsis. A major effect of the pre-treatment was to partially protect energy metabolism under heat shock and favor its subsequent rapid recovery, which was correlated with the survival of seedlings. Rapid recovery of actin cytoskeleton and mitochondrial dynamics were another landmark of heat shock tolerance. The omics confirmed the role of the ubiquitous heat shock response actors but also revealed specific or overlapping responses to priming, heat shock, and their combination. Since only a few components or functions of chloroplast and mitochondria were highlighted in these analyses, the preservation and rapid recovery of their bioenergetic roles upon acute heat stress do not require extensive remodeling of the organelles. Protection of these organelles is rather integrated into the overall heat shock response, thus allowing them to provide the energy required to elaborate other cellular responses toward acclimation.
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Affiliation(s)
- Elise Réthoré
- Univ Angers, Institut Agro Rennes-Angers, INRAE, IRHS-UMR 1345, F-49000, Angers, France
| | - Sandra Pelletier
- Univ Angers, Institut Agro Rennes-Angers, INRAE, IRHS-UMR 1345, F-49000, Angers, France
| | - Thierry Balliau
- INRAE, PAPPSO, UMR/UMR Génétique Végétale, Gif sur Yvette, France
| | - Michel Zivy
- INRAE, PAPPSO, UMR/UMR Génétique Végétale, Gif sur Yvette, France
| | | | - David Macherel
- Univ Angers, Institut Agro Rennes-Angers, INRAE, IRHS-UMR 1345, F-49000, Angers, France
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11
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Stipcich P, Pansini A, Ceccherelli G. Resistance of Posidonia oceanica seedlings to warming: Investigating the importance of the lag-phase duration between two heat events to thermo-priming. MARINE POLLUTION BULLETIN 2024; 204:116515. [PMID: 38796990 DOI: 10.1016/j.marpolbul.2024.116515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2024] [Revised: 04/16/2024] [Accepted: 05/20/2024] [Indexed: 05/29/2024]
Abstract
The increase of marine heat waves (MHWs) occurrence is exacerbated in Mediterranean Sea and temperature resilience-enhancing strategies on key species, such as the seagrass Posidonia oceanica, need to be investigated. "Priming" describes a stimulus that prepares an organism for an improved response to upcoming environmental changes by triggering a memory that remains during a lag-phase. The aim of this study, conducted in Sardinia (Italy), was to investigate whether the development of thermo-primed P. oceanica seedlings is affected by a field simulated MHW depending on the duration of the lag-phase. After the thermo-priming stimulus, seedlings had a 0, 7 or 14 days lag-phase and after that, for each lag-phase group, half of the seedlings experienced a simulated MHW (the other half served as controls). Some other seedlings did not experience either the priming stimulus or the lag-phase. Results did not show any evidence of a memory triggered by the priming stimulus, but they highlighted the importance of an acclimation phase before the highest temperature: seedlings that experienced a gradual increase of temperature had a higher number of leaves and shorter leaf necrosis length compared to seedlings that had a lag-phase between two heat events. Regardless the priming stimulus, MHWs slowed down the development of the leaf and root length. Considering the increase of temperature fluctuations, testing different intensities of priming and different length of lag-phase is necessary to provide information about the adaptive success of the species.
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Affiliation(s)
- Patrizia Stipcich
- Department of Chemical Physical Mathematical and Natural Sciences, University of Sassari, Via Piandanna 4, 07100 Sassari, Italy; Department of Biology, University of Naples Federico II, Naples, Italy; National Biodiversity Future Centre, Palermo, Italy.
| | - Arianna Pansini
- Department of Chemical Physical Mathematical and Natural Sciences, University of Sassari, Via Piandanna 4, 07100 Sassari, Italy
| | - Giulia Ceccherelli
- Department of Chemical Physical Mathematical and Natural Sciences, University of Sassari, Via Piandanna 4, 07100 Sassari, Italy; National Biodiversity Future Centre, Palermo, Italy
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Gelaw TA, Sanan-Mishra N. Molecular priming with H 2O 2 and proline triggers antioxidant enzyme signals in maize seedlings during drought stress. Biochim Biophys Acta Gen Subj 2024; 1868:130633. [PMID: 38762030 DOI: 10.1016/j.bbagen.2024.130633] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 04/25/2024] [Accepted: 05/15/2024] [Indexed: 05/20/2024]
Abstract
BACKGROUND Drought and water stress impose major limitations to crops, including Maize, as they affect the plant biology at multiple levels. Drought activates the cellular signalling machinery to maintain the osmotic and ROS homeostasis for controlling plant response and adaptation to stress. Molecular priming of seeds plays a significant role in imparting stress tolerance by helping plants to remember the stress, which improves their response when they encounter stress again. METHODS In this study, we examined the effect of priming maize seeds with H2O2 and proline, individually or in combination, on response to drought stress. We investigated the role of molecular priming on the physiological, biochemical and molecular response of maize seedlings during drought stress. RESULTS We observed that seed-priming played a significant role in mediating stress tolerance of seedlings under drought stress as indicated by changes in growth, biochemical properties, pigment and osmolyte accumulation, antioxidant enzyme activities, gas exchange parameters and gene expression. Seed-priming resulted in reduced expression of specific miRNAs to increase target transcripts associated with synthesis of osmolytes and maintenance of ROS homeostasis for reducing potential damage to the cellular components. CONCLUSIONS Seed-priming induced changes in the growth, biochemical properties, pigment and osmolyte accumulation, antioxidant enzyme activities, gas exchange parameters and gene expression, though the response was dependent on the genotype, as well as concentration and combination of the priming agents.
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Affiliation(s)
- Temesgen Assefa Gelaw
- Plant RNAi Biology Group, International Centre for Genetic Engineering and Biotechnology, 110067 New Delhi, India; Department of Biotechnology, College of Agriculture and Natural Resource Sciences, Debre Birhan University, 445 Debre Birhan, Ethiopia
| | - Neeti Sanan-Mishra
- Plant RNAi Biology Group, International Centre for Genetic Engineering and Biotechnology, 110067 New Delhi, India.
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13
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Barbut FR, Cavel E, Donev EN, Gaboreanu I, Urbancsok J, Pandey G, Demailly H, Jiao D, Yassin Z, Derba-Maceluch M, Master ER, Scheepers G, Gutierrez L, Mellerowicz EJ. Integrity of xylan backbone affects plant responses to drought. FRONTIERS IN PLANT SCIENCE 2024; 15:1422701. [PMID: 38984158 PMCID: PMC11231379 DOI: 10.3389/fpls.2024.1422701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Accepted: 06/07/2024] [Indexed: 07/11/2024]
Abstract
Drought is a major factor affecting crops, thus efforts are needed to increase plant resilience to this abiotic stress. The overlapping signaling pathways between drought and cell wall integrity maintenance responses create a possibility of increasing drought resistance by modifying cell walls. Here, using herbaceous and woody plant model species, Arabidopsis and hybrid aspen, respectively, we investigated how the integrity of xylan in secondary walls affects the responses of plants to drought stress. Plants, in which secondary wall xylan integrity was reduced by expressing fungal GH10 and GH11 xylanases or by affecting genes involved in xylan backbone biosynthesis, were subjected to controlled drought while their physiological responses were continuously monitored by RGB, fluorescence, and/or hyperspectral cameras. For Arabidopsis, this was supplemented with survival test after complete water withdrawal and analyses of stomatal function and stem conductivity. All Arabidopsis xylan-impaired lines showed better survival upon complete watering withdrawal, increased stomatal density and delayed growth inhibition by moderate drought, indicating increased resilience to moderate drought associated with modified xylan integrity. Subtle differences were recorded between xylan biosynthesis mutants (irx9, irx10 and irx14) and xylanase-expressing lines. irx14 was the most drought resistant genotype, and the only genotype with increased lignin content and unaltered xylem conductivity despite its irx phenotype. Rosette growth was more affected by drought in GH11- than in GH10-expressing plants. In aspen, mild downregulation of GT43B and C genes did not affect drought responses and the transgenic plants grew better than the wild-type in drought and well-watered conditions. Both GH10 and GH11 xylanases strongly inhibited stem elongation and root growth in well-watered conditions but growth was less inhibited by drought in GH11-expressing plants than in wild-type. Overall, plants with xylan integrity impairment in secondary walls were less affected than wild-type by moderately reduced water availability but their responses also varied among genotypes and species. Thus, modifying the secondary cell wall integrity can be considered as a potential strategy for developing crops better suited to withstand water scarcity, but more research is needed to address the underlying molecular causes of this variability.
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Affiliation(s)
- Félix R Barbut
- Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umeå, Sweden
| | - Emilie Cavel
- Centre de Ressources Régionales en Biologie Moléculaire (CRRBM), University of Picardie Jules Verne, Amiens, France
| | - Evgeniy N Donev
- Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umeå, Sweden
| | - Ioana Gaboreanu
- Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umeå, Sweden
| | - János Urbancsok
- Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umeå, Sweden
| | - Garima Pandey
- Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umeå, Sweden
| | - Hervé Demailly
- Centre de Ressources Régionales en Biologie Moléculaire (CRRBM), University of Picardie Jules Verne, Amiens, France
| | - Dianyi Jiao
- Centre de Ressources Régionales en Biologie Moléculaire (CRRBM), University of Picardie Jules Verne, Amiens, France
| | - Zakiya Yassin
- RISE Research Institutes of Sweden, Built Environment Division, Stockholm, Sweden
| | - Marta Derba-Maceluch
- Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umeå, Sweden
| | - Emma R Master
- Department of Chemical Engineering and Applied Chemistry Department, University of Toronto, Toronto, ON, Canada
| | - Gerhard Scheepers
- RISE Research Institutes of Sweden, Built Environment Division, Stockholm, Sweden
| | - Laurent Gutierrez
- Centre de Ressources Régionales en Biologie Moléculaire (CRRBM), University of Picardie Jules Verne, Amiens, France
| | - Ewa J Mellerowicz
- Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Department of Forest Genetics and Plant Physiology, Umeå, Sweden
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14
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Wang L, Lin Y, Hou G, Yang M, Peng Y, Jiang Y, He C, She M, Chen Q, Li M, Zhang Y, Zhang Y, Wang Y, He W, Wang X, Tang H, Luo Y. A histone deacetylase, FaSRT1-2, plays multiple roles in regulating fruit ripening, plant growth and stresses resistance of cultivated strawberry. PLANT, CELL & ENVIRONMENT 2024; 47:2258-2273. [PMID: 38482979 DOI: 10.1111/pce.14885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Revised: 02/29/2024] [Accepted: 03/03/2024] [Indexed: 04/30/2024]
Abstract
Sirtuins (SRTs) are a group of nicotinamide adenine dinucleotide (NAD+)-dependent deacetylase that target both histone and nonhistone proteins. The biological function of SRT in horticultural plants has been rarely studied. In this study, FaSRT1-2 was identified as a key member of the 8 FaSRTs encoded in cultivated strawberry genome. Transient overexpression of FaSRT1-2 in strawberry fruit accelerated ripening, increased the content of anthocyanins and sugars, enhanced ripening-related gene expression. Moreover, stable transformation of FaSRT1-2 in strawberry plants resulted in enhanced vegetative growth, increased sensitivity to heat stress and increased susceptibility to Botrytis cinerea infection. Interestingly, knocking out the homologous gene in woodland strawberry had the opposite effects. Additionally, we found the content of stress-related hormone abscisic acid (ABA) was decreased, while the growth-related gibberellin (GA) concentration was increased in FaSRT1-2 overexpression lines. Gene expression analysis revealed induction of heat shock proteins, transcription factors, stress-related and antioxidant genes in the FaSRT1-2-overexpressed plants while knocked-out of the gene had the opposite impact. In conclusion, our findings demonstrated that FaSRT1-2 could positively promote strawberry plant vegetative growth and fruit ripening by affecting ABA and GA pathways. However, it negatively regulates the resistance to heat stress and B. cinerea infection by influencing the related gene expression.
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Affiliation(s)
- Liangxin Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Yuanxiu Lin
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Guoyan Hou
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Min Yang
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Yuting Peng
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Yuyan Jiang
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Caixia He
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Musha She
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Qing Chen
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Mengyao Li
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Yong Zhang
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Yunting Zhang
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Yan Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Wen He
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Xiaorong Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Haoru Tang
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Ya Luo
- College of Horticulture, Sichuan Agricultural University, Chengdu, Sichuan, China
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15
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Baranova EN, Kononenko NV, Lapshin PV, Nechaeva TL, Khaliluev MR, Zagoskina NV, Smirnova EA, Yuorieva NO, Raldugina GN, Chaban IA, Kurenina LV, Gulevich AA. Superoxide Dismutase Premodulates Oxidative Stress in Plastids for Protection of Tobacco Plants from Cold Damage Ultrastructure Damage. Int J Mol Sci 2024; 25:5544. [PMID: 38791585 PMCID: PMC11122273 DOI: 10.3390/ijms25105544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2024] [Revised: 05/16/2024] [Accepted: 05/17/2024] [Indexed: 05/26/2024] Open
Abstract
ROS-dependent induction of oxidative damage can be used as a trigger initiating genetically determined non-specific protection in plant cells and tissues. Plants are potentially able to withstand various specific (toxic, osmotic) factors of abiotic effects, but do not have sufficient or specific sensitivity to form an adequate effective response. In this work, we demonstrate one of the possible approaches for successful cold acclimation through the formation of effective protection of photosynthetic structures due to the insertion of the heterologous FeSOD gene into the tobacco genome under the control of the constitutive promoter and equipped with a signal sequence targeting the protein to plastid. The increased enzymatic activity of superoxide dismutase in the plastid compartment of transgenic tobacco plants enables them to tolerate the oxidative factor of environmental stresses scavenging ROS. On the other hand, the cost of such resistance is quite high and, when grown under normal conditions, disturbs the arrangement of the intrachloroplastic subdomains leading to the modification of stromal thylakoids, probably significantly affecting the photosynthesis processes that regulate the efficiency of photosystem II. This is partially compensated for by the fact that, at the same time, under normal conditions, the production of peroxide induces the activation of ROS detoxification enzymes. However, a violation of a number of processes, such as the metabolism of accumulation, and utilization and transportation of sugars and starch, is significantly altered, which leads to a shift in metabolic chains. The expected step for further improvement of the applied technology could be both the use of inducible promoters in the expression cassette, and the addition of other genes encoding for hydrogen peroxide-scavenging enzymes in the genetic construct that are downstream in the metabolic chain.
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Affiliation(s)
- Ekaterina N. Baranova
- All-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya St. 42, 127550 Moscow, Russia (M.R.K.); (E.A.S.); (I.A.C.); (L.V.K.)
- N.V. Tsitsin Main Botanical Garden of Russian Academy of Sciences, 127276 Moscow, Russia
- Moscow K.A. Timiryazev Agricultural Academy (RSAU-MTAA), Russian State Agrarian University, Timiryazevskaya 49, 127434 Moscow, Russia
| | - Neonila V. Kononenko
- All-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya St. 42, 127550 Moscow, Russia (M.R.K.); (E.A.S.); (I.A.C.); (L.V.K.)
| | - Pyotr V. Lapshin
- Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya St. 35, 127276 Moscow, Russia (T.L.N.); (N.V.Z.)
| | - Tatiana L. Nechaeva
- Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya St. 35, 127276 Moscow, Russia (T.L.N.); (N.V.Z.)
| | - Marat R. Khaliluev
- All-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya St. 42, 127550 Moscow, Russia (M.R.K.); (E.A.S.); (I.A.C.); (L.V.K.)
- Moscow K.A. Timiryazev Agricultural Academy (RSAU-MTAA), Russian State Agrarian University, Timiryazevskaya 49, 127434 Moscow, Russia
| | - Natalia V. Zagoskina
- Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya St. 35, 127276 Moscow, Russia (T.L.N.); (N.V.Z.)
| | - Elena A. Smirnova
- All-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya St. 42, 127550 Moscow, Russia (M.R.K.); (E.A.S.); (I.A.C.); (L.V.K.)
- Biology Faculty, Lomonosov Moscow State University, Leninskie Gory 1, Building 12, 119991 Moscow, Russia
- Department of Biology, MSU-BIT University, Shenzhen 518172, China
| | - Natalya O. Yuorieva
- Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya St. 35, 127276 Moscow, Russia (T.L.N.); (N.V.Z.)
| | - Galina N. Raldugina
- Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya St. 35, 127276 Moscow, Russia (T.L.N.); (N.V.Z.)
| | - Inna A. Chaban
- All-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya St. 42, 127550 Moscow, Russia (M.R.K.); (E.A.S.); (I.A.C.); (L.V.K.)
| | - Ludmila V. Kurenina
- All-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya St. 42, 127550 Moscow, Russia (M.R.K.); (E.A.S.); (I.A.C.); (L.V.K.)
| | - Alexander A. Gulevich
- All-Russia Research Institute of Agricultural Biotechnology, Timiryazevskaya St. 42, 127550 Moscow, Russia (M.R.K.); (E.A.S.); (I.A.C.); (L.V.K.)
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16
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Bulgakov VP. Chromatin modifications and memory in regulation of stress-related polyphenols: finding new ways to control flavonoid biosynthesis. Crit Rev Biotechnol 2024:1-17. [PMID: 38697923 DOI: 10.1080/07388551.2024.2336529] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Accepted: 03/18/2024] [Indexed: 05/05/2024]
Abstract
The influence of epigenetic factors on plant defense responses and the balance between growth and defense is becoming a central area in plant biology. It is believed that the biosynthesis of secondary metabolites can be regulated by epigenetic factors, but this is not associated with the formation of a "memory" to the previous biosynthetic status. This review shows that some epigenetic effects can result in epigenetic memory, which opens up new areas of research in secondary metabolites, in particular flavonoids. Plant-controlled chromatin modifications can lead to the generation of stress memory, a phenomenon through which information regarding past stress cues is retained, resulting in a modified response to recurring stress. How deeply are the mechanisms of chromatin modification and memory generation involved in the control of flavonoid biosynthesis? This article collects available information from the literature and interactome databases to address this issue. Visualization of the interaction of chromatin-modifying proteins with the flavonoid biosynthetic machinery is presented. Chromatin modifiers and "bookmarks" that may be involved in the regulation of flavonoid biosynthesis through memory have been identified. Through different mechanisms of chromatin modification, plants can harmonize flavonoid metabolism with: stress responses, developmental programs, light-dependent processes, flowering, and longevity programs. The available information points to the possibility of developing chromatin-modifying technologies to control flavonoid biosynthesis.
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Affiliation(s)
- Victor P Bulgakov
- Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch of the Russian Academy of Sciences, Vladivostok, Russia
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17
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Ganie SA, McMulkin N, Devoto A. The role of priming and memory in rice environmental stress adaptation: Current knowledge and perspectives. PLANT, CELL & ENVIRONMENT 2024; 47:1895-1915. [PMID: 38358119 DOI: 10.1111/pce.14855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 12/21/2023] [Accepted: 01/31/2024] [Indexed: 02/16/2024]
Abstract
Plant responses to abiotic stresses are dynamic, following the unpredictable changes of physical environmental parameters such as temperature, water and nutrients. Physiological and phenotypical responses to stress are intercalated by periods of recovery. An earlier stress can be remembered as 'stress memory' to mount a response within a generation or transgenerationally. The 'stress priming' phenomenon allows plants to respond quickly and more robustly to stressors to increase survival, and therefore has significant implications for agriculture. Although evidence for stress memory in various plant species is accumulating, understanding of the mechanisms implicated, especially for crops of agricultural interest, is in its infancy. Rice is a major food crop which is susceptible to abiotic stresses causing constraints on its cultivation and yield globally. Advancing the understanding of the stress response network will thus have a significant impact on rice sustainable production and global food security in the face of climate change. Therefore, this review highlights the effects of priming on rice abiotic stress tolerance and focuses on specific aspects of stress memory, its perpetuation and its regulation at epigenetic, transcriptional, metabolic as well as physiological levels. The open questions and future directions in this exciting research field are also laid out.
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Affiliation(s)
- Showkat Ahmad Ganie
- Department of Biological Sciences, Plant Molecular Science and Centre of Systems and Synthetic Biology, Royal Holloway University of London, Egham, Surrey, UK
| | - Nancy McMulkin
- Department of Biological Sciences, Plant Molecular Science and Centre of Systems and Synthetic Biology, Royal Holloway University of London, Egham, Surrey, UK
| | - Alessandra Devoto
- Department of Biological Sciences, Plant Molecular Science and Centre of Systems and Synthetic Biology, Royal Holloway University of London, Egham, Surrey, UK
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18
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Li H, Huang X, Zhan A. Context-dependent antioxidant defense system (ADS)-based stress memory in response to recurrent environmental challenges in congeneric invasive species. MARINE LIFE SCIENCE & TECHNOLOGY 2024; 6:315-330. [PMID: 38827126 PMCID: PMC11136907 DOI: 10.1007/s42995-024-00228-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/25/2023] [Accepted: 04/01/2024] [Indexed: 06/04/2024]
Abstract
Marine ecosystems are facing escalating environmental fluctuations owing to climate change and human activities, imposing pressures on marine species. To withstand recurring environmental challenges, marine organisms, especially benthic species lacking behavioral choices to select optimal habitats, have to utilize well-established strategies such as the antioxidant defense system (ADS) to ensure their survival. Therefore, understanding of the mechanisms governing the ADS-based response is essential for gaining insights into adaptive strategies for managing environmental challenges. Here we conducted a comparative analysis of the physiological and transcriptional responses based on the ADS during two rounds of 'hypersalinity-recovery' challenges in two model congeneric invasive ascidians, Ciona robusta and C. savignyi. Our results demonstrated that C. savignyi exhibited higher tolerance and resistance to salinity stresses at the physiological level, while C. robusta demonstrated heightened responses at the transcriptional level. We observed distinct transcriptional responses, particularly in the utilization of two superoxide dismutase (SOD) isoforms. Both Ciona species developed physiological stress memory with elevated total SOD (T-SOD) and glutathione (GSH) responses, while only C. robusta demonstrated transcriptional stress memory. The regulatory distinctions within the Nrf2-Keap1 signalling pathway likely explain the formation disparity of transcriptional stress memory between both Ciona species. These findings support the 'context-dependent stress memory hypothesis', emphasizing the emergence of species-specific stress memory at diverse regulatory levels in response to recurrent environmental challenges. Our results enhance our understanding of the mechanisms of environmental challenge management in marine species, particularly those related to the ADS. Supplementary Information The online version contains supplementary material available at 10.1007/s42995-024-00228-y.
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Affiliation(s)
- Hanxi Li
- Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 China
- University of Chinese Academy of Sciences, Beijing, 100049 China
| | - Xuena Huang
- Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 China
| | - Aibin Zhan
- Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085 China
- University of Chinese Academy of Sciences, Beijing, 100049 China
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19
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Eljebbawi A, Hutin S, Zubieta C, Stahl Y. Environmental signals driving liquid-liquid phase separation - a molecular memory in plants? FRONTIERS IN PLANT SCIENCE 2024; 15:1391043. [PMID: 38736449 PMCID: PMC11082374 DOI: 10.3389/fpls.2024.1391043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/24/2024] [Accepted: 04/17/2024] [Indexed: 05/14/2024]
Affiliation(s)
- Ali Eljebbawi
- Institute for Developmental Genetics, Heinrich-Heine University, Düsseldorf, Germany
| | - Stephanie Hutin
- Laboratoire de Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre National de la Recherche Scientifique, Commissariat à l’énergie Atomique et aux Énergies Alternatives, Institut National de Recherche pour l’agriculture, l’alimentation et l’environnement, Institut de Recherche Interdisciplinaire de Grenoble, Grenoble, France
| | - Chloe Zubieta
- Laboratoire de Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre National de la Recherche Scientifique, Commissariat à l’énergie Atomique et aux Énergies Alternatives, Institut National de Recherche pour l’agriculture, l’alimentation et l’environnement, Institut de Recherche Interdisciplinaire de Grenoble, Grenoble, France
| | - Yvonne Stahl
- Institute for Developmental Genetics, Heinrich-Heine University, Düsseldorf, Germany
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20
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Xu WB, Cao F, Liu P, Yan K, Guo QH. The multifaceted role of RNA-based regulation in plant stress memory. FRONTIERS IN PLANT SCIENCE 2024; 15:1387575. [PMID: 38736453 PMCID: PMC11082352 DOI: 10.3389/fpls.2024.1387575] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/18/2024] [Accepted: 04/15/2024] [Indexed: 05/14/2024]
Abstract
Plants have evolved interconnected regulatory pathways which enable them to respond and adapt to their environments. In plants, stress memory enhances stress tolerance through the molecular retention of prior stressful experiences, fostering rapid and robust responses to subsequent challenges. Mounting evidence suggests a close link between the formation of stress memories and effective future stress responses. However, the mechanism by which environmental stressors trigger stress memory formation is poorly understood. Here, we review the current state of knowledge regarding the RNA-based regulation on stress memory formation in plants and discuss research challenges and future directions. Specifically, we focus on the involvement of microRNAs (miRNAs), small interfering RNAs (siRNAs), long non-coding RNAs (lncRNAs), and alternative splicing (AS) in stress memory formation. miRNAs regulate target genes via post-transcriptional silencing, while siRNAs trigger stress memory formation through RNA-directed DNA methylation (RdDM). lncRNAs guide protein complexes for epigenetic regulation, and AS of pre-mRNAs is crucial to plant stress memory. Unraveling the mechanisms underpinning RNA-mediated stress memory formation not only advances our knowledge of plant biology but also aids in the development of improved stress tolerance in crops, enhancing crop performance and global food security.
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Affiliation(s)
- Wei-Bo Xu
- State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, Shandong, China
| | - Fan Cao
- State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, Shandong, China
| | - Peng Liu
- Donald Danforth Plant Science Center, St. Louis, MO, United States
| | - Kang Yan
- State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, Shandong, China
| | - Qian-Huan Guo
- State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Taian, Shandong, China
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21
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Wang L, Chang C. Stomatal improvement for crop stress resistance. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:1823-1833. [PMID: 38006251 DOI: 10.1093/jxb/erad477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Accepted: 11/23/2023] [Indexed: 11/26/2023]
Abstract
The growth and yield of crop plants are threatened by environmental challenges such as water deficit, soil flooding, high salinity, and extreme temperatures, which are becoming increasingly severe under climate change. Stomata contribute greatly to plant adaptation to stressful environments by governing transpirational water loss and photosynthetic gas exchange. Increasing evidence has revealed that stomata formation is shaped by transcription factors, signaling peptides, and protein kinases, which could be exploited to improve crop stress resistance. The past decades have seen unprecedented progress in our understanding of stomata formation, but most of these advances have come from research on model plants. This review highlights recent research in stomata formation in crops and its multifaceted functions in abiotic stress tolerance. Current strategies, limitations, and future directions for harnessing stomatal development to improve crop stress resistance are discussed.
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Affiliation(s)
- Lu Wang
- College of Life Sciences, Qingdao University, Qingdao, Shandong, China
| | - Cheng Chang
- College of Life Sciences, Qingdao University, Qingdao, Shandong, China
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22
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Kashyap S, Agarwala N, Sunkar R. Understanding plant stress memory traits can provide a way for sustainable agriculture. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024; 340:111954. [PMID: 38092267 DOI: 10.1016/j.plantsci.2023.111954] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 12/05/2023] [Accepted: 12/07/2023] [Indexed: 01/01/2024]
Abstract
Being sessile, plants encounter various biotic and abiotic threats in their life cycle. To minimize the damages caused by such threats, plants have acquired sophisticated response mechanisms. One major such response includes memorizing the encountered stimuli in the form of a metabolite, hormone, protein, or epigenetic marks. All of these individually as well as together, facilitate effective transcriptional and post-transcriptional responses upon encountering the stress episode for a second time during the life cycle and in some instances even in the future generations. This review attempts to highlight the recent advances in the area of plant memory. A detailed understanding of plant memory has the potential to offer solutions for developing climate-resilient crops for sustainable agriculture.
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Affiliation(s)
- Sampurna Kashyap
- Department of Botany, Gauhati University, Gopinath Bordoloi Nagar, Jalukbari, Guwahati, Assam, 781014, India
| | - Niraj Agarwala
- Department of Botany, Gauhati University, Gopinath Bordoloi Nagar, Jalukbari, Guwahati, Assam, 781014, India.
| | - Ramanjulu Sunkar
- Department of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK, United States
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Morgado D, Fanesi A, Martin T, Tebbani S, Bernard O, Lopes F. Exploring the dynamics of astaxanthin production in Haematococcus pluvialis biofilms using a rotating biofilm-based system. Biotechnol Bioeng 2024; 121:991-1004. [PMID: 38098364 DOI: 10.1002/bit.28624] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Revised: 11/27/2023] [Accepted: 12/05/2023] [Indexed: 02/20/2024]
Abstract
Microalgae biofilm emerged as a solid alternative to conventional suspended cultures which present high operative costs and complex harvesting processes. Among several designs, rotating biofilm-based systems stand out for their scalability, although their primary applications have been in wastewater treatment and aquaculture. In this work, a rotating system was utilized to produce a high-value compound (astaxanthin) using Haematococcus pluvialis biofilms. The effect of nitrogen regime, light intensity, and light history on biofilm traits was assessed to better understand how to efficiently operate the system. Our results show that H. pluvialis biofilms follow the classical growth stages described for bacterial biofilms (from adhesion to maturation) and that a two-stage (green and red stages) allowed to reach astaxanthin productivities of 204 mg m-2 d-1 . The higher light intensity applied during the red stage (400 and 800 µmol m-2 s-1 ) combined with nitrogen depletion stimulated similar astaxanthin productivities. However, by training the biofilms during the green stage, using mild-light intensity (200 µmol m-2 s-1 ), a process known as priming, the final astaxanthin productivity was enhanced by 40% with respect to biofilms pre-exposed to 50 µmol m-2 s-1 . Overall, this study shows the possibility of utilizing rotating microalgae biofilms to produce high-value compounds laying the foundation for further biotechnological applications of these emerging systems.
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Affiliation(s)
- David Morgado
- CentraleSupélec, Laboratoire Génie des Procédés et Matériaux (LGPM), Université Paris-Saclay, Gif-sur-Yvette, France
| | - Andrea Fanesi
- CentraleSupélec, Laboratoire Génie des Procédés et Matériaux (LGPM), Université Paris-Saclay, Gif-sur-Yvette, France
| | - Thierry Martin
- CentraleSupélec, Laboratoire Génie des Procédés et Matériaux (LGPM), Université Paris-Saclay, Gif-sur-Yvette, France
| | - Sihem Tebbani
- CentraleSupélec, CNRS, Laboratoire des Signaux et Systèmes (L2S), Université Paris-Saclay, Gif-sur-Yvette, France
| | - Olivier Bernard
- INRIA, Centre d'Université Côte d'Azur, Biocore, CNRS, Sorbonne Université, Sophia-Antipolis, France
| | - Filipa Lopes
- CentraleSupélec, Laboratoire Génie des Procédés et Matériaux (LGPM), Université Paris-Saclay, Gif-sur-Yvette, France
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24
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Herrera JC, Savoi S, Dostal J, Elezovic K, Chatzisavva M, Forneck A, Savi T. The legacy of past droughts induces water-sparingly behaviour in Grüner Veltliner grapevines. PLANT BIOLOGY (STUTTGART, GERMANY) 2024. [PMID: 38315499 DOI: 10.1111/plb.13620] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Accepted: 01/08/2024] [Indexed: 02/07/2024]
Abstract
Drought is becoming more frequent and severe in numerous wine-growing regions. Nevertheless, limited research has examined the legacy of recurrent droughts, focusing on leaf physiology and anatomy over consecutive seasons. We investigated drought legacies (after 2 years of drought exposure) in potted grapevines, focusing on stomatal behaviour under well-watered conditions during the third year. Vines were subjected for two consecutive years to short- (SD) or long-term (LD) seasonal droughts, or well-watered conditions (WW). In the third year, all plants were grown without water limitation. Water potential and gas exchange were monitored throughout the three seasons, while leaf morpho-anatomical traits were measured at the end of the third year. During droughts (1st and 2nd year), stem water potential of SD and LD plants fell below -1.1 MPa, with a consequent 75% reduction in stomatal conductance (gs ) compared to WW. In the 3rd year, when all vines were daily irrigated to soil capacity (midday stem water potential ~ -0.3 MPa), 45% lower values of gs were observed in the ex-LD group compared to both ex-SD and ex-WW. Reduced midrib vessel diameter, lower leaf theoretical hydraulic conductivity, and smaller stomata were measured in ex-LD leaves compared to ex-SD and ex-WW, likely contributing to the reduced gas exchange. Our findings suggest that grapevines exposed to drought may adopt a more water-conserving strategy in subsequent seasons, irrespective of current soil water availability, with the degree of change influenced by the intensity and duration of past drought events.
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Affiliation(s)
- J C Herrera
- Department of Crop Sciences, Institute of Viticulture and Pomology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - S Savoi
- Department of Agricultural, Forest and Food Sciences, University of Turin, Grugliasco, Italy
| | - J Dostal
- Department of Crop Sciences, Institute of Viticulture and Pomology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - K Elezovic
- Department of Crop Sciences, Institute of Viticulture and Pomology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - M Chatzisavva
- Department of Crop Sciences, Institute of Viticulture and Pomology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - A Forneck
- Department of Crop Sciences, Institute of Viticulture and Pomology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - T Savi
- Department of Integrative Biology and Biodiversity Research, Institute of Botany, University of Natural Resources and Life Sciences, Vienna, Austria
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Siddique AB, Parveen S, Rahman MZ, Rahman J. Revisiting plant stress memory: mechanisms and contribution to stress adaptation. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2024; 30:349-367. [PMID: 38623161 PMCID: PMC11016036 DOI: 10.1007/s12298-024-01422-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Revised: 02/04/2024] [Accepted: 02/22/2024] [Indexed: 04/17/2024]
Abstract
Highly repetitive adverse environmental conditions are encountered by plants multiple times during their lifecycle. These repetitive encounters with stresses provide plants an opportunity to remember and recall the experiences of past stress-associated responses, resulting in better adaptation towards those stresses. In general, this phenomenon is known as plant stress memory. According to our current understanding, epigenetic mechanisms play a major role in plants stress memory through DNA methylation, histone, and chromatin remodeling, and modulating non-coding RNAs. In addition, transcriptional, hormonal, and metabolic-based regulations of stress memory establishment also exist for various biotic and abiotic stresses. Plant memory can also be generated by priming the plants using various stressors that improve plants' tolerance towards unfavorable conditions. Additionally, the application of priming agents has been demonstrated to successfully establish stress memory. However, the interconnection of all aspects of the underlying mechanisms of plant stress memory is not yet fully understood, which limits their proper utilization to improve the stress adaptations in plants. This review summarizes the recent understanding of plant stress memory and its potential applications in improving plant tolerance towards biotic and abiotic stresses.
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Affiliation(s)
- Abu Bakar Siddique
- Tasmanian Institute of Agriculture, University of Tasmania, Prospect, TAS 7250 Australia
| | - Sumaya Parveen
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka, 1207 Bangladesh
| | - Md Zahidur Rahman
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka, 1207 Bangladesh
| | - Jamilur Rahman
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka, 1207 Bangladesh
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Agathokleous E, Rillig MC, Peñuelas J, Yu Z. One hundred important questions facing plant science derived using a large language model. TRENDS IN PLANT SCIENCE 2024; 29:210-218. [PMID: 37394309 DOI: 10.1016/j.tplants.2023.06.008] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Revised: 06/10/2023] [Accepted: 06/12/2023] [Indexed: 07/04/2023]
Abstract
Artificial intelligence (AI) is advancing rapidly and continually evolving in various fields. Recently, the release of ChatGPT has sparked significant public interest. In this study, we revisit the '100 Important Questions Facing Plant Science' by leveraging ChatGPT as a valuable tool for generating thought-provoking questions relevant to plant science. These questions primarily revolve around the utilization of plants in product development, understanding plant mechanisms, plant-environment interactions, and enhancing plant traits, with an emphasis on sustainable product development. While ChatGPT may not capture certain crucial aspects highlighted by scientists, it offers valuable insights into the questions generated by experts. Our analysis demonstrates that ChatGPT can be cautiously employed as a supportive tool to facilitate, streamline, and expedite specific tasks in plant science.
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Affiliation(s)
- Evgenios Agathokleous
- Key Laboratory of Ecosystem Carbon Source and Sink, China Meteorological Administration (ECSS-CMA), School of Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing, 210044, China; Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters (CIC-FEMD), Nanjing University of Information Science & Technology, Nanjing, China.
| | - Matthias C Rillig
- Freie Universität Berlin, Institut für Biologie, Altensteinstr. 6, D-14195, Berlin, Germany; Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), D-14195, Berlin, Germany
| | - Josep Peñuelas
- CSIC, Global Ecology Unit CREAF-CSIC-UAB, Bellaterra, Catalonia 08193, Spain; CREAF, Cerdanyola del Vallès, Catalonia 08193, Spain
| | - Zhen Yu
- Key Laboratory of Ecosystem Carbon Source and Sink, China Meteorological Administration (ECSS-CMA), School of Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing, 210044, China; Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters (CIC-FEMD), Nanjing University of Information Science & Technology, Nanjing, China.
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27
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Zuo G, Huo J, Yang X, Mei W, Zhang R, Khan A, Feng N, Zheng D. Photosynthetic mechanisms underlying NaCl-induced salinity tolerance in rice (Oryza sativa). BMC PLANT BIOLOGY 2024; 24:41. [PMID: 38195408 PMCID: PMC10777521 DOI: 10.1186/s12870-024-04723-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Accepted: 01/01/2024] [Indexed: 01/11/2024]
Abstract
BACKGROUND Salinity stress is an environmental constraint that normally develops concurrently under field conditions, resulting in drastic limitation of rice plant growth and grain productivity. The objective of this study was to explore the alleviating effects of NaCl pre-treatment on rice seedlings as well as the salt tolerance mechanisms by evaluating morph-physiological traits. RESULTS Variety Huanghuazhan, either soaked in distilled water or 25 mg/L Prohexadione calcium (Pro-Ca), were first hardened with varying concentrations of NaCl solutions (0 and 50 mM NaCl), and then subjected to varying degrees of salt stress (0 and 100 mM NaCl), indicated by S0, S1, S2 and S3, respectively. Growth analysis suggested that NaCl-pretreatment improved the root/shoot ratio in water-soaked rice plant at DAP 0. Data related to the reaction center density, photosynthetic electron transport efficiency, trapping efficiency were compared before (CK) using performance Index (PIabs). Compared to S2 (Pro-Ca-S2) treatment, PIabs did not show any difference with plants pre-treated with NaCl (S3 or Pro-Ca-S3). Rather than PIabs, significant difference was found in photosynthetic electron transport efficiency (ΨEo). The ΨEo value in Pro-S2 was significantly lowered as compared to Pro-S3 treatment at DAP 7, and the decrease rate was about 6.5%. Correlation analysis indicated leaf PIabs was weak correlated with plant biomass while the quantum yield for reduction of the PSI end electron acceptors, trapped energy flux per reaction center and PSII antenna size displayed strong positive correlation with biomass. Additional analysis revealed that 100 mM NaCl significantly reduced leaf linear electron flux under low-light conditions, regardless of whether seedlings had been pre-treated with 50 mM NaCl or not. CONCLUSIONS NaCl-induced salt tolerance was related to the robust photosynthetic machinery.
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Affiliation(s)
- Guanqiang Zuo
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524008, China
- College of Natural Resources and Environment, Northwest A&F University, Xianyang, 712100, China
| | - Jingxin Huo
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524008, China
| | - Xiaohui Yang
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524008, China
| | - Wanqi Mei
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524008, China
| | - Rui Zhang
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524008, China
| | - Aaqil Khan
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524008, China
| | - Naijie Feng
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524008, China
- National Saline-tolerant Rice Technology Innovation Center, South China, Zhanjiang, 524008, China
- Shenzhen Institute of Guangdong Ocean University, Shenzhen, 518108, China
| | - Dianfeng Zheng
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, 524008, China.
- National Saline-tolerant Rice Technology Innovation Center, South China, Zhanjiang, 524008, China.
- Shenzhen Institute of Guangdong Ocean University, Shenzhen, 518108, China.
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28
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Hudson J, Egan S. Marine diseases and the Anthropocene: Understanding microbial pathogenesis in a rapidly changing world. Microb Biotechnol 2024; 17:e14397. [PMID: 38217393 PMCID: PMC10832532 DOI: 10.1111/1751-7915.14397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 12/20/2023] [Indexed: 01/15/2024] Open
Abstract
Healthy marine ecosystems are paramount for Earth's biodiversity and are key to sustaining the global economy and human health. The effects of anthropogenic activity represent a pervasive threat to the productivity of marine ecosystems, with intensifying environmental stressors such as climate change and pollution driving the occurrence and severity of microbial diseases that can devastate marine ecosystems and jeopardise food security. Despite the potentially catastrophic outcomes of marine diseases, our understanding of host-pathogen interactions remains an understudied aspect of both microbiology and environmental research, especially when compared to the depth of information available for human and agricultural systems. Here, we identify three avenues of research in which we can advance our understanding of marine disease in the context of global change, and make positive steps towards safeguarding marine communities for future generations.
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Affiliation(s)
- Jennifer Hudson
- Centre for Marine Science and Innovation, School of Biological, Earth and Environmental SciencesThe University of New South WalesSydneyNew South WalesAustralia
| | - Suhelen Egan
- Centre for Marine Science and Innovation, School of Biological, Earth and Environmental SciencesThe University of New South WalesSydneyNew South WalesAustralia
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29
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Charng YY, Chen CJ. Letter to the Editor: The Role of HSFA2 in Within-Generational Plasticity and Transgenerational Memory of the Heat-Induced Early Flowering Phenotype in Arabidopsis. PLANT & CELL PHYSIOLOGY 2023; 64:1383-1385. [PMID: 37664911 DOI: 10.1093/pcp/pcad100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Revised: 08/11/2023] [Accepted: 09/02/2023] [Indexed: 09/05/2023]
Affiliation(s)
- Yee-Yung Charng
- Agricultural Biotechnology Research Center, Academia Sinica, Taipei, Taiwan 11529, ROC
| | - Chun-Jen Chen
- Agricultural Biotechnology Research Center, Academia Sinica, Taipei, Taiwan 11529, ROC
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30
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Cappetta E, Del Regno C, Conte M, Castro-Hinojosa C, Del Sol-Fernández S, Vergata C, Buti M, Curcio R, Onder A, Mazzei P, Funicello N, De Pasquale S, Terzaghi M, Del Gaudio P, Leone A, Martinelli F, Moros M, Ambrosone A. An Integrated Multilevel Approach Unveils Complex Seed-Nanoparticle Interactions and Their Implications for Seed Priming. ACS NANO 2023; 17:22539-22552. [PMID: 37931310 DOI: 10.1021/acsnano.3c06172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2023]
Abstract
Nanotechnology has the potential to revolutionize agriculture with the introduction of engineered nanomaterials. However, their use is hindered by high cost, marginal knowledge of their interactions with plants, and unpredictable effects related to massive use in crop cultivation. Nanopriming is an innovative seed priming technology able to match economic, agronomic, and environmental needs in agriculture. The present study was focused on unveiling, by a multilevel integrated approach, undisclosed aspects of seed priming mediated by iron oxide magnetic nanoparticles in pepper seeds (Capsicum annuum), one of the most economically important crops worldwide. Inductively coupled plasma atomic emission mass spectrometry and scanning electron microscopy were used to quantify the MNP uptake and assess seed surface changes. Magnetic resonance imaging mapped the distribution of MNPs prevalently in the seed coat. The application of MNPs significantly enhanced the root and vegetative growth of pepper plants, whereas seed priming with equivalent Fe concentrations supplied as FeCl3 did not yield these positive effects. Finally, global gene expression by RNA-sequencing identified more than 2,200 differentially expressed genes, most of them involved in plant developmental processes and defense mechanisms. Collectively, these data provide evidence on the link between structural seed changes and an extensive transcriptional reprogramming, which boosts the plant growth and primes the embryo to cope with environmental challenges that might occur during the subsequent developmental and growth stages.
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Affiliation(s)
- Elisa Cappetta
- Department of Pharmacy, University of Salerno, Fisciano 84084, Italy
| | - Carmine Del Regno
- Department of Pharmacy, University of Salerno, Fisciano 84084, Italy
| | - Marisa Conte
- Department of Pharmacy, University of Salerno, Fisciano 84084, Italy
| | - Christian Castro-Hinojosa
- Instituto de Nanociencia y Materiales de Aragón, INMA (CSIC-Universidad de Zaragoza), Zaragoza 50009, Spain
| | - Susel Del Sol-Fernández
- Instituto de Nanociencia y Materiales de Aragón, INMA (CSIC-Universidad de Zaragoza), Zaragoza 50009, Spain
| | - Chiara Vergata
- Department of Biology, University of Florence, Sesto Fiorentino 50019, Italy
| | - Matteo Buti
- Department of Agriculture, Food, Environmental and Forestry Sciences (DAGRI), University of Florence, Firenze 50144, Italy
| | - Rossella Curcio
- Department of Pharmacy, University of Salerno, Fisciano 84084, Italy
| | - Anil Onder
- Department of Pharmacy, University of Salerno, Fisciano 84084, Italy
| | - Pierluigi Mazzei
- Department of Pharmacy, University of Salerno, Fisciano 84084, Italy
| | - Nicola Funicello
- Department of Physics 'E.R. Caianiello', University of Salerno, Fisciano 84084, Italy
| | - Salvatore De Pasquale
- Department of Physics 'E.R. Caianiello', University of Salerno, Fisciano 84084, Italy
| | - Mattia Terzaghi
- Department of Biosciences, Biotechnologies and Environment, University of Bari Aldo Moro, Bari 70121, Italy
| | | | - Antonietta Leone
- Department of Pharmacy, University of Salerno, Fisciano 84084, Italy
| | - Federico Martinelli
- Department of Biology, University of Florence, Sesto Fiorentino 50019, Italy
| | - Maria Moros
- Instituto de Nanociencia y Materiales de Aragón, INMA (CSIC-Universidad de Zaragoza), Zaragoza 50009, Spain
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), Madrid 28029, Spain
| | - Alfredo Ambrosone
- Department of Pharmacy, University of Salerno, Fisciano 84084, Italy
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Kovalchuk I. Role of Epigenetic Factors in Response to Stress and Establishment of Somatic Memory of Stress Exposure in Plants. PLANTS (BASEL, SWITZERLAND) 2023; 12:3667. [PMID: 37960024 PMCID: PMC10648063 DOI: 10.3390/plants12213667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 10/18/2023] [Accepted: 10/21/2023] [Indexed: 11/15/2023]
Abstract
All species are well adapted to their environment. Stress causes a magnitude of biochemical and molecular responses in plants, leading to physiological or pathological changes. The response to various stresses is genetically predetermined, but is also controlled on the epigenetic level. Most plants are adapted to their environments through generations of exposure to all elements. Many plant species have the capacity to acclimate or adapt to certain stresses using the mechanism of priming. In most cases, priming is a somatic response allowing plants to deal with the same or similar stress more efficiently, with fewer resources diverted from growth and development. Priming likely relies on multiple mechanisms, but the differential expression of non-coding RNAs, changes in DNA methylation, histone modifications, and nucleosome repositioning play a crucial role. Specifically, we emphasize the role of BRM/CHR17, BRU1, FGT1, HFSA2, and H2A.Z proteins as positive regulators, and CAF-1, MOM1, DDM1, and SGS3 as potential negative regulators of somatic stress memory. In this review, we will discuss the role of epigenetic factors in response to stress, priming, and the somatic memory of stress exposures.
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Affiliation(s)
- Igor Kovalchuk
- Department of Biological Sciences, University of Lethbridge, Lethbridge, AB T1K 3M4, Canada
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Feijó ADR, Viana VE, Balbinot A, Fipke MV, Souza GM, do Amarante L, Avila LAD. Water Deficit at Vegetative Stage Induces Tolerance to High Temperature during Anthesis in Rice. PLANTS (BASEL, SWITZERLAND) 2023; 12:3133. [PMID: 37687380 PMCID: PMC10490413 DOI: 10.3390/plants12173133] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Revised: 08/22/2023] [Accepted: 08/29/2023] [Indexed: 09/10/2023]
Abstract
BACKGROUND Crop yields have been affected by many different biotic and abiotic factors. Generally, plants experience more than one stress during their life cycle, and plants can tolerate multiple stresses and develop cross-tolerance. The expected rise in atmospheric CO2 concentration ([CO2]) can contribute to cross-tolerance. Priming is a strategy to increase yield or to maintain yield under stress conditions. Thus, our objective was to evaluate if priming the rice plants with water deficit during the vegetative stage can induce tolerance to heat stress at anthesis and to evaluate the contribution of e[CO2]. METHODS The experiment was arranged in a completely randomized design in a factorial arrangement. Factor A consisted of the following treatments: water deficit at four-leaf stage (no-stress, and drought stress), heat at anthesis (normal temperature, high temperature), and priming with water deficit at four-leaf stage and heat stress at anthesis; and Factor B was two [CO2] treatments: a[CO2] = 400 ± 40 μmol mol-1 and e[CO2] = 700 ± 40 μmol mol-1. We assessed the effect of the treatments on plant growth, yield, biochemical, and transcriptome alterations. RESULTS Although e[CO2] affected rice growth parameters, it did not affect the priming effect. Primed plants showed an increase in yield and number of panicles per plant. Primed plants showed upregulation of OsHSP16.9A, OsHSP70.1, and OsHSP70.6. These results showed induced cross-tolerance. CONCLUSIONS Water deficit at the rice vegetative stage reduces the effect of heat stress at the reproductive stage. Water deficit at the vegetative stage can be used, after further testing in field conditions, to reduce the effect of heat stress during flowering in rice.
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Affiliation(s)
- Anderson da Rosa Feijó
- Plant Physiology Graduate Program, Federal University of Pelotas, Pelotas 96160-000, Brazil
| | - Vívian Ebeling Viana
- Crop Protection Graduate Program, Federal University of Pelotas, Pelotas 96015-560, Brazil
| | - Andrisa Balbinot
- Crop Protection Graduate Program, Federal University of Pelotas, Pelotas 96015-560, Brazil
| | - Marcus Vinicius Fipke
- Crop Protection Graduate Program, Federal University of Pelotas, Pelotas 96015-560, Brazil
| | - Gustavo Maia Souza
- Plant Physiology Graduate Program, Federal University of Pelotas, Pelotas 96160-000, Brazil
| | - Luciano do Amarante
- Plant Physiology Graduate Program, Federal University of Pelotas, Pelotas 96160-000, Brazil
| | - Luis Antonio de Avila
- Department of Soil and Crop Sciences, Mississippi State University, Mississippi State, MS 39762, USA
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Zhang M, Trushina NK, Lang T, Hahn M, Pasmanik-Chor M, Sharon A. Serine peptidases and increased amounts of soluble proteins contribute to heat priming of the plant pathogenic fungus Botrytis cinerea. mBio 2023; 14:e0107723. [PMID: 37409814 PMCID: PMC10470532 DOI: 10.1128/mbio.01077-23] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Accepted: 05/23/2023] [Indexed: 07/07/2023] Open
Abstract
Botrytis cinerea causes gray mold disease in leading crop plants. The disease develops only at cool temperatures, but the fungus remains viable in warm climates and can survive periods of extreme heat. We discovered a strong heat priming effect in which the exposure of B. cinerea to moderately high temperatures greatly improves its ability to cope with subsequent, potentially lethal temperature conditions. We showed that priming promotes protein solubility during heat stress and discovered a group of priming-induced serine-type peptidases. Several lines of evidence, including transcriptomics, proteomics, pharmacology, and mutagenesis data, link these peptidases to the B. cinerea priming response, highlighting their important roles in regulating priming-mediated heat adaptation. By imposing a series of sub-lethal temperature pulses that subverted the priming effect, we managed to eliminate the fungus and prevent disease development, demonstrating the potential for developing temperature-based plant protection methods by targeting the fungal heat priming response. IMPORTANCE Priming is a general and important stress adaptation mechanism. Our work highlights the importance of priming in fungal heat adaptation, reveals novel regulators and aspects of heat adaptation mechanisms, and demonstrates the potential of affecting microorganisms, including pathogens through manipulations of the heat adaptation response.
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Affiliation(s)
- Mingzhe Zhang
- School of Plant Sciences and Food Security, Tel Aviv University, Tel Aviv, Israel
| | - Naomi Kagan Trushina
- School of Plant Sciences and Food Security, Tel Aviv University, Tel Aviv, Israel
| | - Tabea Lang
- School of Plant Sciences and Food Security, Tel Aviv University, Tel Aviv, Israel
- Department of Biology, Technical University of Kaiserslautern, Kaiserslautern, Germany
| | - Matthias Hahn
- Department of Biology, Technical University of Kaiserslautern, Kaiserslautern, Germany
| | | | - Amir Sharon
- School of Plant Sciences and Food Security, Tel Aviv University, Tel Aviv, Israel
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Wang X, Tan NWK, Chung FY, Yamaguchi N, Gan ES, Ito T. Transcriptional Regulators of Plant Adaptation to Heat Stress. Int J Mol Sci 2023; 24:13297. [PMID: 37686100 PMCID: PMC10487819 DOI: 10.3390/ijms241713297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 08/20/2023] [Accepted: 08/24/2023] [Indexed: 09/10/2023] Open
Abstract
Heat stress (HS) is becoming an increasingly large problem for food security as global warming progresses. As sessile species, plants have evolved different mechanisms to cope with the disruption of cellular homeostasis, which can impede plant growth and development. Here, we summarize the mechanisms underlying transcriptional regulation mediated by transcription factors, epigenetic regulators, and regulatory RNAs in response to HS. Additionally, cellular activities for adaptation to HS are discussed, including maintenance of protein homeostasis through protein quality control machinery, and autophagy, as well as the regulation of ROS homeostasis via a ROS-scavenging system. Plant cells harmoniously regulate their activities to adapt to unfavorable environments. Lastly, we will discuss perspectives on future studies for improving urban agriculture by increasing crop resilience to HS.
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Affiliation(s)
- Xuejing Wang
- Department of Biological Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma 630-0192, Nara, Japan; (X.W.); (N.Y.)
| | - Nicholas Wui Kiat Tan
- School of Applied Science, Republic Polytechnic, Singapore 738964, Singapore; (N.W.K.T.); (F.Y.C.)
| | - Fong Yi Chung
- School of Applied Science, Republic Polytechnic, Singapore 738964, Singapore; (N.W.K.T.); (F.Y.C.)
| | - Nobutoshi Yamaguchi
- Department of Biological Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma 630-0192, Nara, Japan; (X.W.); (N.Y.)
| | - Eng-Seng Gan
- School of Applied Science, Republic Polytechnic, Singapore 738964, Singapore; (N.W.K.T.); (F.Y.C.)
| | - Toshiro Ito
- Department of Biological Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma 630-0192, Nara, Japan; (X.W.); (N.Y.)
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Liu L, Zhang P, Feng G, Hou W, Liu T, Gai Z, Shen Y, Qiu X, Li X. Salt priming induces low-temperature tolerance in sugar beet via xanthine metabolism. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 201:107810. [PMID: 37321038 DOI: 10.1016/j.plaphy.2023.107810] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 05/07/2023] [Accepted: 05/31/2023] [Indexed: 06/17/2023]
Abstract
To understand the physiological mechanisms involved in xanthine metabolism during salt priming for improving low-temperature tolerance, salt priming (SP), xanthine dehydrogenase inhibitor (XOI), exogenous allantoin (EA), and back-supplemented EA (XOI + EA) treatments were given and the low-temperature tolerance of sugar beet was tested. Under low-temperature stress, salt priming promoted the growth of sugar beet leaves and increased the maximum quantum efficiency of PS II (Fv/Fm). However, during salt priming, either XOI or EA treatment alone increased the content of reactive oxygen species (ROS), such as superoxide anion and hydrogen peroxide, in the leaves under low-temperature stress. XOI treatment increased allantoinase activity with its gene (BvallB) expression under low-temperature stress. Compared to the XOI treatment, the EA treatment alone and the XOI + EA treatment increased the activities of antioxidant enzymes. At low temperatures, the sucrose content and the activity of key carbohydrate enzymes (AGPase, Cylnv, and FK) were significantly reduced by XOI compared to the changes under salt priming. XOI also stimulated the expression of protein phosphatase 2C and sucrose non-fermenting1-related protein kinase (BvSNRK2). The results of a correlation network analysis showed that BvallB was positively correlated with malondialdehyde, D-Fructose-6-phosphate, and D-Glucose-6-phosphate, and negatively correlated with BvPOX42, BvSNRK2, dehydroascorbate reductase, and catalase. These results suggested that salt-induced xanthine metabolism modulated ROS metabolism, photosynthetic carbon assimilation, and carbohydrate metabolism, thus enhancing low-temperature tolerance in sugar beet. Additionally, xanthine and allantoin were found to play key roles in plant stress resistance.
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Affiliation(s)
- Lei Liu
- College of Resources and Environment / Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Jilin Agricultural University, Changchun, 130118, China; State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China
| | - Pengfei Zhang
- College of Agriculture, Northeast Agricultural University, Harbin, 150030, China
| | - Guozhong Feng
- College of Resources and Environment / Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Jilin Agricultural University, Changchun, 130118, China
| | - Wenfeng Hou
- College of Resources and Environment / Key Laboratory of Straw Comprehensive Utilization and Black Soil Conservation, Jilin Agricultural University, Changchun, 130118, China
| | - Tianhao Liu
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China
| | - Zhijia Gai
- Jiamusi Branch, Heilongjiang Academy of Agricultural Sciences, Jiamusi, 154007, China
| | - Yanhui Shen
- Shandong (Linyi) Institute of Modern Agriculture, Zhejiang University, Linyi, 276000, China
| | - Xin Qiu
- College of Economics and Management, Jilin Agricultural University, Changchun, 130118, China
| | - Xiangnan Li
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China; College of Advanced Agricultural Sciences, University of Chinese Academy of Sciences, Beijing, 100049, China.
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36
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Hollwey E, Briffa A, Howard M, Zilberman D. Concepts, mechanisms and implications of long-term epigenetic inheritance. Curr Opin Genet Dev 2023; 81:102087. [PMID: 37441873 DOI: 10.1016/j.gde.2023.102087] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2023] [Revised: 06/19/2023] [Accepted: 06/21/2023] [Indexed: 07/15/2023]
Abstract
Many modes and mechanisms of epigenetic inheritance have been elucidated in eukaryotes. Most of them are relatively short-term, generally not exceeding one or a few organismal generations. However, emerging evidence indicates that one mechanism, cytosine DNA methylation, can mediate epigenetic inheritance over much longer timescales, which are mostly or completely inaccessible in the laboratory. Here we discuss the evidence for, and mechanisms and implications of, such long-term epigenetic inheritance. We argue that compelling evidence supports the long-term epigenetic inheritance of gene body methylation, at least in the model angiosperm Arabidopsis thaliana, and that variation in such methylation can therefore serve as an epigenetic basis for phenotypic variation in natural populations.
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Affiliation(s)
| | - Amy Briffa
- Department of Computational and Systems Biology, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK
| | - Martin Howard
- Department of Computational and Systems Biology, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK
| | - Daniel Zilberman
- Institute of Science and Technology, 3400 Klosterneuburg, Austria.
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37
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Chen S, Ten Tusscher KHWJ, Sasidharan R, Dekker SC, de Boer HJ. Parallels between drought and flooding: An integrated framework for plant eco-physiological responses to water stress. PLANT-ENVIRONMENT INTERACTIONS (HOBOKEN, N.J.) 2023; 4:175-187. [PMID: 37583875 PMCID: PMC10423978 DOI: 10.1002/pei3.10117] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Accepted: 06/18/2023] [Indexed: 08/17/2023]
Abstract
Drought and flooding occur at opposite ends of the soil moisture spectrum yet their resulting stress responses in plants share many similarities. Drought limits root water uptake to which plants respond with stomatal closure and reduced leaf gas exchange. Flooding limits root metabolism due to soil oxygen deficiency, which also limits root water uptake and leaf gas exchange. As drought and flooding can occur consecutively in the same system and resulting plant stress responses share similar mechanisms, a single theoretical framework that integrates plant responses over a continuum of soil water conditions from drought to flooding is attractive. Based on a review of recent literature, we integrated the main plant eco-physiological mechanisms in a single theoretical framework with a focus on plant water transport, plant oxygen dynamics, and leaf gas exchange. We used theory from the soil-plant-atmosphere continuum modeling as "backbone" for our framework, and subsequently incorporated interactions between processes that regulate plant water and oxygen status, abscisic acid and ethylene levels, and the resulting acclimation strategies in response to drought, waterlogging, and complete submergence. Our theoretical framework provides a basis for the development of mathematical models to describe plant responses to the soil moisture continuum from drought to flooding.
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Affiliation(s)
- Siluo Chen
- Computational Developmental Biology, Department of Biology Utrecht University Utrecht The Netherlands
- Centre for Complex System Studies Utrecht University Utrecht The Netherlands
| | | | - Rashmi Sasidharan
- Plant Stress Resilience, Institute of Environmental Biology Utrecht University Utrecht The Netherlands
| | - Stefan C Dekker
- Environmental Sciences, Copernicus Institute of Sustainable Development Utrecht University Utrecht The Netherlands
| | - Hugo J de Boer
- Environmental Sciences, Copernicus Institute of Sustainable Development Utrecht University Utrecht The Netherlands
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38
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Khoshniat P, Rafudeen MS, Seifi A. ABA spray on Arabidopsis seedlings increases mature plants vigor under optimal and water-deficit conditions partly by enhancing nitrogen assimilation. PHYSIOLOGIA PLANTARUM 2023; 175:e13979. [PMID: 37616011 DOI: 10.1111/ppl.13979] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2023] [Revised: 05/20/2023] [Accepted: 07/14/2023] [Indexed: 08/25/2023]
Abstract
Here, we report the effects of a single abscisic acid (ABA) spray on Arabidopsis seedlings on growth, development, primary metabolism, and response to water-deficit stress in adult and next-generation plants. The experiments were performed over 2 years in two different laboratories in Iran and South Africa. In each experiment, fifty 7-day-old Arabidopsis seedlings were sprayed with 10 μM ABA, 1 mM H2 O2 , distilled water, or left without spraying as priming treatments. Water-deficit stress was applied on half of the plants in each treatment by withholding water 2 days after spraying. Results showed that a single ABA spray at the cotyledonary stage significantly increased plant biomass and delayed flowering. The ABA spray significantly enhanced drought tolerance so that the survival rate after rehydration was 100 and 33% in the first and the second experiments, respectively, for ABA-treated plants compared to 35 and 0% for water-sprayed plants. This enhanced drought tolerance was not inheritable. Metabolomics analyses suggested that ABA probably increases the antioxidant capacity of the plant cells and modulates tricarboxylic acid cycle toward enhanced nitrogen assimilation. Strikingly, we also observed that the early water spray decreases mature plant resilience under water-deficit conditions and cause substantial transient metabolomics perturbations.
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Affiliation(s)
- Parisa Khoshniat
- Department of Biotechnology and Plant Breeding, Faculty of Agriculture, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Muhammad Suhail Rafudeen
- Department of Molecular and Cell Biology, Plant Stress Laboratory, University of Cape Town, Cape Town, South Africa
| | - Alireza Seifi
- Department of Biotechnology and Plant Breeding, Faculty of Agriculture, Ferdowsi University of Mashhad, Mashhad, Iran
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39
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Panda K, Mohanasundaram B, Gutierrez J, McLain L, Castillo SE, Sheng H, Casto A, Gratacós G, Chakrabarti A, Fahlgren N, Pandey S, Gehan MA, Slotkin RK. The plant response to high CO 2 levels is heritable and orchestrated by DNA methylation. THE NEW PHYTOLOGIST 2023; 238:2427-2439. [PMID: 36918471 DOI: 10.1111/nph.18876] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2022] [Accepted: 03/07/2023] [Indexed: 05/19/2023]
Abstract
Plant responses to abiotic environmental challenges are known to have lasting effects on the plant beyond the initial stress exposure. Some of these lasting effects are transgenerational, affecting the next generation. The plant response to elevated carbon dioxide (CO2 ) levels has been well studied. However, these investigations are typically limited to plants grown for a single generation in a high CO2 environment while transgenerational studies are rare. We aimed to determine transgenerational growth responses in plants after exposure to high CO2 by investigating the direct progeny when returned to baseline CO2 levels. We found that both the flowering plant Arabidopsis thaliana and seedless nonvascular plant Physcomitrium patens continue to display accelerated growth rates in the progeny of plants exposed to high CO2 . We used the model species Arabidopsis to dissect the molecular mechanism and found that DNA methylation pathways are necessary for heritability of this growth response. More specifically, the pathway of RNA-directed DNA methylation is required to initiate methylation and the proteins CMT2 and CMT3 are needed for the transgenerational propagation of this DNA methylation to the progeny plants. Together, these two DNA methylation pathways establish and then maintain a cellular memory to high CO2 exposure.
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Affiliation(s)
- Kaushik Panda
- Donald Danforth Plant Science Center, St Louis, MO, 63132, USA
| | | | - Jorge Gutierrez
- Donald Danforth Plant Science Center, St Louis, MO, 63132, USA
| | - Lauren McLain
- Donald Danforth Plant Science Center, St Louis, MO, 63132, USA
| | | | - Hudanyun Sheng
- Donald Danforth Plant Science Center, St Louis, MO, 63132, USA
| | - Anna Casto
- Donald Danforth Plant Science Center, St Louis, MO, 63132, USA
| | - Gustavo Gratacós
- Department of Computer Science & Engineering, Washington University in St Louis, St Louis, MO, 63130, USA
| | - Ayan Chakrabarti
- Department of Computer Science & Engineering, Washington University in St Louis, St Louis, MO, 63130, USA
| | - Noah Fahlgren
- Donald Danforth Plant Science Center, St Louis, MO, 63132, USA
| | - Sona Pandey
- Donald Danforth Plant Science Center, St Louis, MO, 63132, USA
| | - Malia A Gehan
- Donald Danforth Plant Science Center, St Louis, MO, 63132, USA
| | - R Keith Slotkin
- Donald Danforth Plant Science Center, St Louis, MO, 63132, USA
- Division of Biological Sciences, University of Missouri, MO, 65211, Columbia, USA
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40
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Li Q, Wang X, Sun Z, Wu Y, Malkodslo MM, Ge J, Jing Z, Zhou Q, Cai J, Zhong Y, Huang M, Jiang D. DNA methylation levels of TaP5CS and TaBADH are associated with enhanced tolerance to PEG-induced drought stress triggered by drought priming in wheat. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 200:107769. [PMID: 37263071 DOI: 10.1016/j.plaphy.2023.107769] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Revised: 05/04/2023] [Accepted: 05/15/2023] [Indexed: 06/03/2023]
Abstract
Drought priming is a promising strategy to enhance tolerance to recurred drought in wheat. However, the underlying mechanisms of priming-induced tolerance are far from clear. Here, three different priming intensities (P1D, P2D, P3D) and two varieties with different sensitivities to drought priming were used to investigate the effects and mechanisms of drought priming. Results showed light (P1D) or moderate (P2D) drought priming intensity induced positive effects for the drought sensitive variety (YM16), while high (P3D) priming intensity brought a negative impact on the plant drought resistant. For drought insensitive one (XM33), light priming intensity had no significant effect on tolerance to drought, while moderate or high intensity showed better priming effects. Moderate priming induced higher leaf water potential and also the osmolytes levels. Consistent with the proline and betaine, the related synthetic enzymatic activities, as well as the expression of TaP5CS and TaBADH were higher in P2D in YM16 and P3D in XM33. The contents of proline and betaine showed a positive correlation with activities of SOD, CAT, GR, AsA, and GSH contents, and a negative correlation with O2.-, H2O2, and MDA contents. Further analysis revealed CG demethylation of ATG-proximal regions in the promoter of TaP5CS and TaBADH were involved in promoting the synthesis of proline and betaine in primed plants. Collectively, these findings demonstrate drought priming effect was variety independent but depended on the priming severity, and demethylation of TaP5CS and TaBADH involved in the accumulation of osmolytes which contribute to the enhanced drought tolerance induced by priming.
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Affiliation(s)
- Qing Li
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Xiao Wang
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China.
| | - Zhuangzhuang Sun
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Yixin Wu
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Maguje Masa Malkodslo
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Jiakun Ge
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Zihan Jing
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Qin Zhou
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Jian Cai
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Yingxin Zhong
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Mei Huang
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Dong Jiang
- National Technique Innovation Center for Regional Wheat Production, Key Laboratory of Crop Ecophysiology, Ministry of Agriculture, Nanjing Agricultural University, Nanjing, 210095, China.
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41
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Kumar S, Seem K, Mohapatra T. Biochemical and Epigenetic Modulations under Drought: Remembering the Stress Tolerance Mechanism in Rice. Life (Basel) 2023; 13:life13051156. [PMID: 37240801 DOI: 10.3390/life13051156] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2023] [Revised: 05/07/2023] [Accepted: 05/09/2023] [Indexed: 05/28/2023] Open
Abstract
A plant, being a sessile organism, needs to modulate biochemical, physiological, and molecular responses to the environment in a quick and efficient manner to be protected. Drought stress is a frequently occurring abiotic stress that severely affects plant growth, development, and productivity. Short- and long-term memories are well-known phenomena in animals; however, the existence of such remembrance in plants is still being discovered. In this investigation, different rice genotypes were imposed with drought stress just before flowering and the plants were re-watered for recovery from the stress. Seeds collected from the stress-treated (stress-primed) plants were used to raise plants for the subsequent two generations under a similar experimental setup. Modulations in physio-biochemical (chlorophyll, total phenolics and proline contents, antioxidant potential, lipid peroxidation) and epigenetic [5-methylcytosine (5-mC)] parameters were analyzed in the leaves of the plants grown under stress as well as after recovery. There was an increase in proline (>25%) and total phenolic (>19%) contents, antioxidant activity (>7%), and genome-wide 5-mC level (>56%), while a decrease (>9%) in chlorophyll content was recorded to be significant under the stress. Interestingly, a part of the increased proline content, total phenolics content, antioxidant activity, and 5-mC level was retained even after the withdrawal of the stress. Moreover, the increased levels of biochemical and epigenetic parameters were observed to be transmitted/inherited to the subsequent generations. These might help in developing stress-tolerant crops and improving crop productivity under the changing global climate for sustainable food production and global food security.
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Affiliation(s)
- Suresh Kumar
- Division of Biochemistry, ICAR-Indian Agricultural Research Institute, New Delhi 110012, India
| | - Karishma Seem
- Division of Biochemistry, ICAR-Indian Agricultural Research Institute, New Delhi 110012, India
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42
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Li Q, Liu N, Wu C. Novel insights into maize (Zea mays) development and organogenesis for agricultural optimization. PLANTA 2023; 257:94. [PMID: 37031436 DOI: 10.1007/s00425-023-04126-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2022] [Accepted: 03/22/2023] [Indexed: 06/19/2023]
Abstract
In maize, intrinsic hormone activities and sap fluxes facilitate organogenesis patterning and plant holistic development; these hormone movements should be a primary focus of developmental biology and agricultural optimization strategies. Maize (Zea mays) is an important crop plant with distinctive life history characteristics and structural features. Genetic studies have extended our knowledge of maize developmental processes, genetics, and molecular ecophysiology. In this review, the classical life cycle and life history strategies of maize are analyzed to identify spatiotemporal organogenesis properties and develop a definitive understanding of maize development. The actions of genes and hormones involved in maize organogenesis and sex determination, along with potential molecular mechanisms, are investigated, with findings suggesting central roles of auxin and cytokinins in regulating maize holistic development. Furthermore, investigation of morphological and structural characteristics of maize, particularly node ubiquity and the alternate attachment pattern of lateral organs, yields a novel regulatory model suggesting that maize organ initiation and subsequent development are derived from the stimulation and interaction of auxin and cytokinin fluxes. Propositions that hormone activities and sap flow pathways control organogenesis are thoroughly explored, and initiation and development processes of distinctive maize organs are discussed. Analysis of physiological factors driving hormone and sap movement implicates cues of whole-plant activity for hormone and sap fluxes to stimulate maize inflorescence initiation and organ identity determination. The physiological origins and biogenetic mechanisms underlying maize floral sex determination occurring at the tassel and ear spikelet are thoroughly investigated. The comprehensive outline of maize development and morphogenetic physiology developed in this review will enable farmers to optimize field management and will provide a reference for de novo crop domestication and germplasm improvement using genome editing biotechnologies, promoting agricultural optimization.
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Affiliation(s)
- Qinglin Li
- Crop Genesis and Novel Agronomy Center, Yangling, 712100, Shaanxi, China.
| | - Ning Liu
- Shandong ZhongnongTiantai Seed Co., Ltd, Pingyi, 273300, Shandong, China
| | - Chenglai Wu
- State Key Laboratory of Crop Biology, Shandong Agricultural University, Tai'an, 271018, Shandong, China.
- College of Agronomy, Shandong Agricultural University, Tai'an, 271018, Shandong, China.
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43
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Jeong BR, Jang J, Jin E. Genome engineering via gene editing technologies in microalgae. BIORESOURCE TECHNOLOGY 2023; 373:128701. [PMID: 36746216 DOI: 10.1016/j.biortech.2023.128701] [Citation(s) in RCA: 13] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/02/2023] [Revised: 01/27/2023] [Accepted: 02/01/2023] [Indexed: 06/18/2023]
Abstract
CRISPR-Cas has revolutionized genetic modification with its comparative simplicity and accuracy, and it can be used even at the genomic level. Microalgae are excellent feedstocks for biofuels and nutraceuticals because they contain high levels of fatty acids, carotenoids, and other metabolites; however, genome engineering for microalgae is not yet as developed as for other model organisms. Microalgal engineering at the genetic and metabolic levels is relatively well established, and a few genomic resources are available. Their genomic information was used for a "safe harbor" site for stable transgene expression in microalgae. This review proposes further genome engineering schemes including the construction of sgRNA libraries, pan-genomic and epigenomic resources, and mini-genomes, which can together be developed into synthetic biology for carbon-based engineering in microalgae. Acetyl-CoA is at the center of carbon metabolic pathways and is further reviewed for the production of molecules including terpenoids in microalgae.
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Affiliation(s)
- Byeong-Ryool Jeong
- Department of Life Science, Research Institute for Natural Sciences, Hanyang University, Seoul 04763, Korea
| | - Junhwan Jang
- Department of Life Science, Research Institute for Natural Sciences, Hanyang University, Seoul 04763, Korea
| | - EonSeon Jin
- Department of Life Science, Research Institute for Natural Sciences, Hanyang University, Seoul 04763, Korea; Hanyang Institute of Bioscience and Biotechnology, Hanyang University, Seoul 04763, Korea.
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44
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Volaire F, Barkaoui K, Grémillet D, Charrier G, Dangles O, Lamarque LJ, Martin-StPaul N, Chuine I. Is a seasonally reduced growth potential a convergent strategy to survive drought and frost in plants? ANNALS OF BOTANY 2023; 131:245-254. [PMID: 36567631 PMCID: PMC9992932 DOI: 10.1093/aob/mcac153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2022] [Accepted: 12/14/2022] [Indexed: 06/17/2023]
Abstract
BACKGROUND Plants have adapted to survive seasonal life-threatening frost and drought. However, the timing and frequency of such events are impacted by climate change, jeopardizing plant survival. Understanding better the strategies of survival to dehydration stress is therefore timely and can be enhanced by the cross-fertilization of research between disciplines (ecology, physiology), models (woody, herbaceous species) and types of stress (drought, frost). SCOPE We build upon the 'growth-stress survival' trade-off, which underpins the identification of global plant strategies across environments along a 'fast-slow' economics spectrum. Although phenological adaptations such as dormancy are crucial to survive stress, plant global strategies along the fast-slow economic spectrum rarely integrate growth variations across seasons. We argue that the growth-stress survival trade-off can be a useful framework to identify convergent plant ecophysiological strategies to survive both frost and drought. We review evidence that reduced physiological activity, embolism resistance and dehydration tolerance of meristematic tissues are interdependent strategies that determine thresholds of mortality among plants under severe frost and drought. We show that complete dormancy, i.e. programmed growth cessation, before stress occurrence, minimizes water flows and maximizes dehydration tolerance during seasonal life-threatening stresses. We propose that incomplete dormancy, i.e. the programmed reduction of growth potential during the harshest seasons, could be an overlooked but major adaptation across plants. Quantifying stress survival in a range of non-dormant versus winter- or summer-dormant plants, should reveal to what extent incomplete to complete dormancy could represent a proxy for dehydration tolerance and stress survival. CONCLUSIONS Our review of the strategies involved in dehydration stress survival suggests that winter and summer dormancy are insufficiently acknowledged as plant ecological strategies. Incorporating a seasonal fast-slow economics spectrum into global plant strategies improves our understanding of plant resilience to seasonal stress and refines our prevision of plant adaptation to extreme climatic events.
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Affiliation(s)
- Florence Volaire
- CEFE, Université Montpellier, INRAE, CNRS, EPHE, IRD, F-34090 Montpellier, France
| | - Karim Barkaoui
- CIRAD, UMR ABSys, F-34398 Montpellier, France
- ABSys, Université F-34060 Montpellier, CIHEAM-IAMM, CIRAD, INRAE, Institut Agro, Montpellier, France
| | - David Grémillet
- CEFE, Université Montpellier, CNRS, EPHE, IRD, F-34090 Montpellier, France
- Percy FitzPatrick Institute of African Ornithology, University of Cape Town, Rondebosch, South Africa
| | - Guillaume Charrier
- Université Clermont Auvergne, INRAE, PIAF, F-63000 Clermont Ferrand, France
| | - Olivier Dangles
- CEFE, Université Montpellier, CNRS, EPHE, IRD, F-34090 Montpellier, France
| | - Laurent J Lamarque
- Département des Sciences de l’Environnement, Université du Québec à Trois-Rivières, Trois-Rivières, QC, G9A 5H7, Canada
| | - Nicolas Martin-StPaul
- INRAE, URFM, Domaine Saint Paul, Centre de recherche PACA, 228 route de l’Aérodrome, CS 40509, Domaine Saint-Paul, Site Agroparc, France
| | - Isabelle Chuine
- CEFE, Université Montpellier, CNRS, EPHE, IRD, F-34090 Montpellier, France
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Singiri JR, Priyanka G, Trishla VS, Adler-Agmon Z, Grafi G. Moonlight Is Perceived as a Signal Promoting Genome Reorganization, Changes in Protein and Metabolite Profiles and Plant Growth. PLANTS (BASEL, SWITZERLAND) 2023; 12:1121. [PMID: 36903981 PMCID: PMC10004791 DOI: 10.3390/plants12051121] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/12/2023] [Revised: 02/20/2023] [Accepted: 02/27/2023] [Indexed: 06/18/2023]
Abstract
Rhythmic exposure to moonlight has been shown to affect animal behavior, but its effects on plants, often observed in lunar agriculture, have been doubted and often regarded as myth. Consequently, lunar farming practices are not well scientifically supported, and the influence of this conspicuous environmental factor, the moon, on plant cell biology has hardly been investigated. We studied the effect of full moonlight (FML) on plant cell biology and examined changes in genome organization, protein and primary metabolite profiles in tobacco and mustard plants and the effect of FML on the post-germination growth of mustard seedlings. Exposure to FML was accompanied by a significant increase in nuclear size, changes in DNA methylation and cleavage of the histone H3 C-terminal region. Primary metabolites associated with stress were significantly increased along with the expression of stress-associated proteins and the photoreceptors phytochrome B and phototropin 2; new moon experiments disproved the light pollution effect. Exposure of mustard seedlings to FML enhanced growth. Thus, our data show that despite the low-intensity light emitted by the moon, it is an important environmental factor perceived by plants as a signal, leading to alteration in cellular activities and enhancement of plant growth.
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Cifuentes L, González M, Pinto-Irish K, Álvarez R, Coba de la Peña T, Ostria-Gallardo E, Franck N, Fischer S, Barros G, Castro C, Ortiz J, Sanhueza C, Del-Saz NF, Bascunan-Godoy L, Castro PA. Metabolic imprint induced by seed halo-priming promotes a differential physiological performance in two contrasting quinoa ecotypes. FRONTIERS IN PLANT SCIENCE 2023; 13:1034788. [PMID: 36865946 PMCID: PMC9971973 DOI: 10.3389/fpls.2022.1034788] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/02/2022] [Accepted: 12/14/2022] [Indexed: 06/18/2023]
Abstract
"Memory imprint" refers to the process when prior exposure to stress prepares the plant for subsequent stress episodes. Seed priming is a strategy to change the performance of seedlings to cope with stress; however, mechanisms associated with the metabolic response are fragmentary. Salinity is one of the major abiotic stresses that affect crop production in arid and semiarid areas. Chenopodium quinoa Willd. (Amaranthaceae) is a promising crop to sustain food security and possesses a wide genetic diversity of salinity tolerance. To elucidate if the metabolic memory induced by seed halo-priming (HP) differs among contrasting saline tolerance plants, seeds of two ecotypes of Quinoa (Socaire from Atacama Salar, and BO78 from Chilean Coastal/lowlands) were treated with a saline solution and then germinated and grown under different saline conditions. The seed HP showed a more positive impact on the sensitive ecotype during germination and promoted changes in the metabolomic profile in both ecotypes, including a reduction in carbohydrates (starch) and organic acids (citric and succinic acid), and an increase in antioxidants (ascorbic acid and α-tocopherol) and related metabolites. These changes were linked to a further reduced level of oxidative markers (methionine sulfoxide and malondialdehyde), allowing improvements in the energy use in photosystem II under saline conditions in the salt-sensitive ecotype. In view of these results, we conclude that seed HP prompts a "metabolic imprint" related to ROS scavenger at the thylakoid level, improving further the physiological performance of the most sensitive ecotype.
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Affiliation(s)
| | - Máximo González
- Laboratorio de Fisiología Vegetal, Centro de Estudios Avanzados en Zonas Áridas (CEAZA), La Serena, Chile
| | - Katherine Pinto-Irish
- Laboratorio de Fisiología Vegetal, Centro de Estudios Avanzados en Zonas Áridas (CEAZA), La Serena, Chile
| | - Rodrigo Álvarez
- Laboratorio de Fisiología Vegetal, Centro de Estudios Avanzados en Zonas Áridas (CEAZA), La Serena, Chile
| | - Teodoro Coba de la Peña
- Laboratorio de Fisiología Vegetal, Centro de Estudios Avanzados en Zonas Áridas (CEAZA), La Serena, Chile
| | - Enrique Ostria-Gallardo
- Laboratorio de Fisiología Vegetal, Centro de Estudios Avanzados en Zonas Áridas (CEAZA), La Serena, Chile
| | - Nicolás Franck
- Centro de Estudios en Zonas Áridas (CEZA), Facultad de Ciencias Agronómicas, Universidad de Chile, Coquimbo, Chile
| | - Susana Fischer
- Laboratorio de Fisiología Vegetal, Departamento de Producción vegetal Facultad de Agronomía, Universidad de Concepción, Concepción, Chile
| | - Gabriel Barros
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Catalina Castro
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - José Ortiz
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Carolina Sanhueza
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Néstor Fernández Del-Saz
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Luisa Bascunan-Godoy
- Laboratorio de Fisiología Vegetal, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Patricio A. Castro
- Departamento de Fisiología, Facultad de Ciencias Biológicas, Universidad de Concepción, Concepción, Chile
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47
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Impact of climate perturbations on seeds and seed quality for global agriculture. Biochem J 2023; 480:177-196. [PMID: 36749123 DOI: 10.1042/bcj20220246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2022] [Revised: 01/05/2023] [Accepted: 01/16/2023] [Indexed: 02/08/2023]
Abstract
In agriculture, seeds are the most basic and vital input on which croplands productivity depends. These implies a good starting material, good production lines and good storage options. High-quality seed lots must be free of pests and pathogens and contain a required degree of genetic purity. Seeds need also to be stored in good condition between harvest and later sowing, to insure later on the field a good plant density and higher crop yield. In general, these parameters are already widely accepted and considered in many countries where advanced technologies evaluate them. However, the more and more frequently devastating climate changes observed around the world has put seed quality under threat, and current seeds may not be adapted to hazardous and unpredictable conditions. Climate-related factors such as temperature and water availability directly affect seed development and later germination. For these reasons, investigating seed quality in response to climate changes is a step to propose new crop varieties and practices that will bring solutions for our future.
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48
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Gallusci P, Agius DR, Moschou PN, Dobránszki J, Kaiserli E, Martinelli F. Deep inside the epigenetic memories of stressed plants. TRENDS IN PLANT SCIENCE 2023; 28:142-153. [PMID: 36404175 DOI: 10.1016/j.tplants.2022.09.004] [Citation(s) in RCA: 19] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Revised: 09/26/2022] [Accepted: 09/30/2022] [Indexed: 06/16/2023]
Abstract
Recent evidence sheds light on the peculiar type of plant intelligence. Plants have developed complex molecular networks that allow them to remember, choose, and make decisions depending on the stress stimulus, although they lack a nervous system. Being sessile, plants can exploit these networks to optimize their resources cost-effectively and maximize their fitness in response to multiple environmental stresses. Even more interesting is the capability to transmit this experience to the next generation(s) through epigenetic modifications that add to the classical genetic inheritance. In this opinion article, we present concepts and perspectives regarding the capabilities of plants to sense, perceive, remember, re-elaborate, respond, and to some extent transmit to their progeny information to adapt more efficiently to climate change.
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Affiliation(s)
- Philippe Gallusci
- Ecophysiologie et Génomique Fonctionnelle de la Vigne (EGFV), University of Bordeaux, Bordeaux Sciences Agro, INRAE, ISVV, Villenave d'Ornon, France
| | - Dolores R Agius
- Centre of Molecular Medicine and Biobanking, University of Malta, Msida, Malta; Ġ.F. Abela Junior College, Ġuzè Debono Square, Msida, Malta
| | - Panagiotis N Moschou
- Department of Plant Biology, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, Uppsala, Sweden; Department of Biology, University of Crete, Heraklion, Greece; Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Greece
| | - Judit Dobránszki
- Centre for Agricultural Genomics and Biotechnology, University of Debrecen, Debrecen, Hungary
| | - Eirini Kaiserli
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, UK
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49
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Cadavid IC, Balbinott N, Margis R. Beyond transcription factors: more regulatory layers affecting soybean gene expression under abiotic stress. Genet Mol Biol 2023; 46:e20220166. [PMID: 36706026 PMCID: PMC9881580 DOI: 10.1590/1678-4685-gmb-2022-0166] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2022] [Accepted: 11/18/2022] [Indexed: 01/28/2023] Open
Abstract
Abiotic stresses such as nutritional imbalance, salt, light intensity, and high and low temperatures negatively affect plant growth and development. Through the course of evolution, plants developed multiple mechanisms to cope with environmental variations, such as physiological, morphological, and molecular adaptations. Epigenetic regulation, transcription factor activity, and post-transcriptional regulation operated by RNA molecules are mechanisms associated with gene expression regulation under stress. Epigenetic regulation, including histone and DNA covalent modifications, triggers chromatin remodeling and changes the accessibility of transcription machinery leading to alterations in gene activity and plant homeostasis responses. Soybean is a legume widely produced and whose productivity is deeply affected by abiotic stresses. Many studies explored how soybean faces stress to identify key elements and improve productivity through breeding and genetic engineering. This review summarizes recent progress in soybean gene expression regulation through epigenetic modifications and circRNAs pathways, and points out the knowledge gaps that are important to study by the scientific community. It focuses on epigenetic factors participating in soybean abiotic stress responses, and chromatin modifications in response to stressful environments and draws attention to the regulatory potential of circular RNA in post-transcriptional processing.
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Affiliation(s)
- Isabel Cristina Cadavid
- Universidade Federal do Rio Grande do Sul, Centro de Biotecnologia, Programa de Pós-graduação em Biologia Celular e Molecular (PPGBCM), Porto Alegre, Brazil
| | - Natalia Balbinott
- Universidade Federal do Rio Grande do Sul, Departamento de Genética, Programa de Pós-graduação em Genética e Biologia Molecular (PPGBM), Porto Alegre, Brazil
| | - Rogerio Margis
- Universidade Federal do Rio Grande do Sul, Centro de Biotecnologia, Programa de Pós-graduação em Biologia Celular e Molecular (PPGBCM), Porto Alegre, Brazil
- Universidade Federal do Rio Grande do Sul, Departamento de Genética, Programa de Pós-graduação em Genética e Biologia Molecular (PPGBM), Porto Alegre, Brazil
- Universidade Federal do Rio Grande do Sul, Departamento de Biofisica, Porto Alegre, Brazil
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50
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Couée I. Perspectives in Plant Abiotic Stress Signaling. Methods Mol Biol 2023; 2642:429-444. [PMID: 36944892 DOI: 10.1007/978-1-0716-3044-0_23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/23/2023]
Abstract
State-of-the-art collections of strategies, approaches, and methods are immediately useful for ongoing characterizations or for novel discoveries in the scientific field of plant abiotic stress signaling. It must however be kept in mind that, in the future, these strategies, approaches, and methods will be facing a number of increasingly complex issues. The development of the necessary confrontation of laboratory-based knowledge on abiotic stress signaling mechanisms with real-life in natura situations of plant-stress interactions involves at least five levels of complexity: (i) plant biodiversity, (ii) the spatio-temporal heterogeneity of stress-related parameters, (iii) the unknowns of future stress-related constraints, (iv) the influence of biotic interactions, (v) the crosstalk between various signaling pathways and their final integration into physiological responses. These complexities are major bottlenecks for assessing the evolutionary, ecological, and agronomical relevance of abiotic stress signaling studies. All of the presently-described strategies, approaches, and methods will have to be gradually complemented with the development of real-time and in natura tools, with systematic application of mathematical modeling to complex interactions and with further research on the impact of stress memory mechanisms on long-term responses.
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Affiliation(s)
- Ivan Couée
- UMR 6553 ECOBIO (Ecosystems-Biodiversity-Evolution), Centre National de la Recherche Scientifique (CNRS), University of Rennes, Rennes, France.
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