1
|
Coupier G, Podgorski T. Comment on "Dynamics and rheology of vesicles under confined Poiseuille flow" by Z. Gou, H. Zhang, A. Nait-Ouhra, M. Abbasi, A. Farutin and C. Misbah, Soft Matter, 2023, 19, 9101. SOFT MATTER 2024; 20:6677-6680. [PMID: 39082841 DOI: 10.1039/d3sm01679j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/02/2024]
Abstract
In a recent paper, [Gou et al., Soft Matter, 2023, 19, 9101-9114] studied numerically the viscosity of a confined suspension of vesicles flowing in a channel as a function of vesicle concentration. In order to discuss the genericity of the observed behaviour, namely a nearly constant effective viscosity at low concentrations, we complement their study by a comparison with the few existing ones in the literature. In particular, we highlight that they fail to reproduce well established results for blood viscosity in microcirculation, thereby suggesting that the conclusions regarding the optimization of cell transport and oxygenation may not apply. We conclude with a quick discussion on potential improvements regarding numerical modeling, as long as physiological relevance is sought.
Collapse
Affiliation(s)
- Gwennou Coupier
- Université Grenoble Alpes, CNRS, LIPhy, F-38000 Grenoble, France.
| | - Thomas Podgorski
- Université Grenoble Alpes, CNRS, Grenoble INP, LRP, F-38000 Grenoble, France.
| |
Collapse
|
2
|
Perillo MA, Burgos I, Clop EM, Sanchez JM, Nolan V. The role of water in reactions catalysed by hydrolases under conditions of molecular crowding. Biophys Rev 2023; 15:639-660. [PMID: 37681097 PMCID: PMC10480385 DOI: 10.1007/s12551-023-01104-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2023] [Accepted: 07/23/2023] [Indexed: 09/09/2023] Open
Abstract
Under macromolecular crowding (MC) conditions such as cellular, extracellular, food and other environments of biotechnological interest, the thermodynamic activity of the different macromolecules present in the system is several orders of magnitude higher than in dilute solutions. In this state, the diffusion rates are affected by the volume exclusion induced by the crowders. Immiscible liquid phases, which may arise in MC by liquid-liquid phase separation, may induce a dynamic confinement of reactants, products and/or enzymes, tuning reaction rates. In cellular environments and other crowding conditions, membranes and macromolecules provide, on the whole, large surfaces that can perturb the solvent, causing its immobilisation by adsorption in the short range and also affecting the solvent viscosity in the long range. The latter phenomenon can affect the conformation of a protein and/or the degree of association of its protomers and, consequently, its activity. Changes in the water structure can also alter the enzyme-substrate interaction, and, in the case of hydrolytic enzymes, where water is one of the substrates, it also affects the reaction mechanism. Here, we review the evidence for how macromolecular crowding affects the catalysis induced by hydrolytic enzymes, focusing on the structure and dynamics of water.
Collapse
Affiliation(s)
- Maria A. Perillo
- Facultad de Ciencias Exactas, Físicas y Naturales, ICTA and Departamento de Química, Cátedra de Química Biológica, Universidad Nacional de Córdoba, Av. Vélez Sársfield 1611, 5016 Córdoba, Argentina
- CONICET, Instituto de Investigaciones Biológicas y Tecnológicas (IIByT), Córdoba, Argentina
| | - Inés Burgos
- CONICET, Instituto de Investigaciones Biológicas y Tecnológicas (IIByT), Córdoba, Argentina
- Facultad de Ciencias Exactas, Físicas y Naturales, ICTA and Departamento de Química Industrial y Aplicada, Cátedra de Química Biológica, Universidad Nacional de Córdoba, Av. Vélez Sársfield 1611, 5016 Córdoba, Argentina
| | - Eduardo M. Clop
- Facultad de Ciencias Exactas, Físicas y Naturales, ICTA and Departamento de Química, Cátedra de Química Biológica, Universidad Nacional de Córdoba, Av. Vélez Sársfield 1611, 5016 Córdoba, Argentina
- CONICET, Instituto de Investigaciones Biológicas y Tecnológicas (IIByT), Córdoba, Argentina
| | - Julieta M. Sanchez
- Facultad de Ciencias Exactas, Físicas y Naturales, ICTA and Departamento de Química, Cátedra de Química Biológica, Universidad Nacional de Córdoba, Av. Vélez Sársfield 1611, 5016 Córdoba, Argentina
- CONICET, Instituto de Investigaciones Biológicas y Tecnológicas (IIByT), Córdoba, Argentina
- Institut de Biotecnologia I de Biomedicina, Universitat Autònoma de Barcelona, Bellaterra, 08193 Barcelona, Spain
- Departament de Genètica I de Microbiologia, Universitat Autònoma de Barcelona, Bellaterra, 08193 Barcelona, Spain
- CIBER de Bioingeniería Biomateriales y Nanomedicina (CIBER-BBN), Bellaterra, 08193 Barcelona, Spain
| | - Verónica Nolan
- Facultad de Ciencias Exactas, Físicas y Naturales, ICTA and Departamento de Química, Cátedra de Química Biológica, Universidad Nacional de Córdoba, Av. Vélez Sársfield 1611, 5016 Córdoba, Argentina
- CONICET, Instituto de Investigaciones Biológicas y Tecnológicas (IIByT), Córdoba, Argentina
| |
Collapse
|
3
|
Ivanov YD, Tatur VY, Shumov ID, Kozlov AF, Valueva AA, Ivanova IA, Ershova MO, Ivanova ND, Stepanov IN, Lukyanitsa AA, Ziborov VS. The Effect of a Rotating Cone on Horseradish Peroxidase Aggregation on Mica Revealed by Atomic Force Microscopy. MICROMACHINES 2022; 13:1947. [PMID: 36363968 PMCID: PMC9697547 DOI: 10.3390/mi13111947] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Revised: 11/03/2022] [Accepted: 11/08/2022] [Indexed: 06/16/2023]
Abstract
Our study reported herein aims to determine whether an electromagnetic field, induced triboelectrically by a metallic cone, rotating at a frequency of 167 Hz, has an effect on the properties of the horseradish peroxidase (HRP) enzyme. Atomic force microscopy (AFM) was employed to detect even the most subtle effects on single enzyme molecules. In parallel, a macroscopic method (spectrophotometry) was used to reveal whether the enzymatic activity of HRP in solution was affected. An aqueous solution of the enzyme was incubated at a distance of 2 cm from the rotating cone. The experiments were performed at various incubation times. The control experiments were performed with a non-rotating cone. The incubation of the HRP solution was found to cause the disaggregation of the enzyme. At longer incubation times, this disaggregation was found to be accompanied by the formation of higher-order aggregates; however, no change in the HRP enzymatic activity was observed. The results of our experiments could be of interest in the development of enzyme-based biosensors with rotating elements such as stirrers. Additionally, the results obtained herein are important for the correct interpretation of data obtained with such biosensors.
Collapse
Affiliation(s)
- Yuri D. Ivanov
- Institute of Biomedical Chemistry, Pogodinskaya Str., 10 Build. 8, 119121 Moscow, Russia
- Joint Institute for High Temperatures of the Russian Academy of Sciences, 125412 Moscow, Russia
| | - Vadim Y. Tatur
- Foundation of Perspective Technologies and Novations, 115682 Moscow, Russia
| | - Ivan D. Shumov
- Institute of Biomedical Chemistry, Pogodinskaya Str., 10 Build. 8, 119121 Moscow, Russia
| | - Andrey F. Kozlov
- Institute of Biomedical Chemistry, Pogodinskaya Str., 10 Build. 8, 119121 Moscow, Russia
| | - Anastasia A. Valueva
- Institute of Biomedical Chemistry, Pogodinskaya Str., 10 Build. 8, 119121 Moscow, Russia
| | - Irina A. Ivanova
- Institute of Biomedical Chemistry, Pogodinskaya Str., 10 Build. 8, 119121 Moscow, Russia
| | - Maria O. Ershova
- Institute of Biomedical Chemistry, Pogodinskaya Str., 10 Build. 8, 119121 Moscow, Russia
| | - Nina D. Ivanova
- Foundation of Perspective Technologies and Novations, 115682 Moscow, Russia
- Moscow State Academy of Veterinary Medicine and Biotechnology Named after Skryabin, 109472 Moscow, Russia
| | - Igor N. Stepanov
- Foundation of Perspective Technologies and Novations, 115682 Moscow, Russia
| | - Andrei A. Lukyanitsa
- Foundation of Perspective Technologies and Novations, 115682 Moscow, Russia
- Faculty of Computational Mathematics and Cybernetics, Moscow State University, 119991 Moscow, Russia
| | - Vadim S. Ziborov
- Institute of Biomedical Chemistry, Pogodinskaya Str., 10 Build. 8, 119121 Moscow, Russia
- Joint Institute for High Temperatures of the Russian Academy of Sciences, 125412 Moscow, Russia
| |
Collapse
|
4
|
Meuwly M, Karplus M. The functional role of the hemoglobin-water interface. Mol Aspects Med 2021; 84:101042. [PMID: 34756740 DOI: 10.1016/j.mam.2021.101042] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Accepted: 09/27/2021] [Indexed: 02/06/2023]
Abstract
The interface between hemoglobin (Hb) and its environment, in particular water, is of great physiological relevance. Here, results from in vitro, in vivo, and computational experiments (molecular dynamics simulations) are summarized and put into perspective. One of the main findings from the computations is that the stability of the deoxy, ligand-free T-state (T0) can be stabilized relative to the deoxy R-state (R0) only in sufficiently large simulation boxes for the hydrophobic effect to manifest itself. This effect directly influences protein stability and is operative also under physiological conditions. Furthermore, molecular simulations provide a dynamical interpretation of the Perutz model for Hb function. Results from experiments using higher protein concentrations and realistic cellular environments are also discussed. One of the next great challenges for computational studies, which as we show is likely to be taken up in the near future, is to provide a molecular-level understanding of the dynamics of proteins in such crowded environments.
Collapse
Affiliation(s)
- Markus Meuwly
- Department of Chemistry, University of Basel, Klingelbergstrasse 80, CH-4056, Basel, Switzerland; Department of Chemistry, Brown University, Providence RI, USA.
| | - Martin Karplus
- Department of Chemistry, Harvard University, USA; Laboratoire de Chimie Biophysique, ISIS, Université de Strasbourg, 67000, Strasbourg, France.
| |
Collapse
|
5
|
Matrai AA, Varga G, Tanczos B, Barath B, Varga A, Horvath L, Bereczky Z, Deak A, Nemeth N. In vitro effects of temperature on red blood cell deformability and membrane stability in human and various vertebrate species. Clin Hemorheol Microcirc 2021; 78:291-300. [PMID: 33682704 DOI: 10.3233/ch-211118] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
BACKGROUND The effects of temperature on micro-rheological variables have not been completely revealed yet. OBJECTIVE To investigate micro-rheological effects of heat treatment in human, rat, dog, and porcine blood samples. METHODS Red blood cell (RBC) - buffer suspensions were prepared and immersed in a 37, 40, and 43°C heat-controlled water bath for 10 minutes. Deformability, as well as mechanical stability of RBCs were measured in ektacytometer. These tests were also examined in whole blood samples at various temperatures, gradually between 37 and 45°C in the ektacytometer. RESULTS RBC deformability significantly worsened in the samples treated at 40 and 43°C, more expressed in human, porcine, rat, and in smaller degree in canine samples. The way of heating (incubation vs. ektacytometer temperation) and the composition of the sample (RBC-PBS suspension or whole blood) resulted in the different magnitude of RBC deformability deterioration. Heating affected RBC membrane (mechanical) stability, showing controversial alterations. CONCLUSION Significant changes occur in RBC deformability by increasing temperature, showing inter-species differences. The magnitude of alterations is depending on the way of heating and the composition of the sample. The results may contribute to better understanding the micro-rheological deterioration in hyperthermia or fever.
Collapse
Affiliation(s)
- Adam Attila Matrai
- Department of Operative Techniques and Surgical Research, Faculty of Medicine, University of Debrecen, Debrecen, Hungary.,Doctoral School of Clinical Medicine, University of Debrecen, Debrecen, Hungary
| | - Gabor Varga
- Department of Operative Techniques and Surgical Research, Faculty of Medicine, University of Debrecen, Debrecen, Hungary.,Doctoral School of Clinical Medicine, University of Debrecen, Debrecen, Hungary
| | - Bence Tanczos
- Department of Operative Techniques and Surgical Research, Faculty of Medicine, University of Debrecen, Debrecen, Hungary.,Doctoral School of Clinical Medicine, University of Debrecen, Debrecen, Hungary
| | - Barbara Barath
- Department of Operative Techniques and Surgical Research, Faculty of Medicine, University of Debrecen, Debrecen, Hungary.,Doctoral School of Clinical Medicine, University of Debrecen, Debrecen, Hungary
| | - Adam Varga
- Department of Operative Techniques and Surgical Research, Faculty of Medicine, University of Debrecen, Debrecen, Hungary.,Doctoral School of Clinical Medicine, University of Debrecen, Debrecen, Hungary
| | - Laszlo Horvath
- Department of Pharmaceutical Surveillance and Economics, Faculty of Pharmacy, University of Debrecen, Debrecen, Hungary
| | - Zsuzsanna Bereczky
- Division of Clinical Laboratory Science, Department of Laboratory Medicine, Faculty of Medicine, University of Debrecen, Debrecen, Hungary
| | - Adam Deak
- Department of Operative Techniques and Surgical Research, Faculty of Medicine, University of Debrecen, Debrecen, Hungary
| | - Norbert Nemeth
- Department of Operative Techniques and Surgical Research, Faculty of Medicine, University of Debrecen, Debrecen, Hungary
| |
Collapse
|
6
|
Isiksacan Z, Serhatlioglu M, Elbuken C. In vitro analysis of multiple blood flow determinants using red blood cell dynamics under oscillatory flow. Analyst 2021; 145:5996-6005. [PMID: 32720945 DOI: 10.1039/d0an00604a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The flow behavior of blood is determined mainly by red blood cell (RBC) deformation and aggregation as well as blood viscoelasticity. These intricately interdependent parameters should be monitored by healthcare providers to understand all aspects of circulatory flow dynamics under numerous cases including cardiovascular and infectious diseases. Current medical instruments and microfluidic systems lack the ability to quantify these parameters all at once and in physiologically relevant flow conditions. This work presents a handheld platform and a measurement method for quantitative analysis of multiple of these parameters from 50 μl undiluted blood inside a miniaturized channel. The assay is based on an optical transmission analysis of collective RBC deformation and aggregation under near-infrared illumination during a 1 s damped oscillatory flow and at stasis, respectively. Measurements with blood of different hemo-rheological properties demonstrate that the presented approach holds a potential for initiating simultaneous and routine on-chip blood flow analysis even in resource-poor settings.
Collapse
Affiliation(s)
- Ziya Isiksacan
- UNAM - National Nanotechnology Research Center and Institute of Materials Science and Nanotechnology, Bilkent University, 06800, Ankara, Turkey.
| | | | | |
Collapse
|
7
|
Briole A, Podgorski T, Abou B. Molecular rotors as intracellular probes of red blood cell stiffness. SOFT MATTER 2021; 17:4525-4537. [PMID: 33949619 DOI: 10.1039/d1sm00321f] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The deformability of red blood cells is an essential parameter that controls the rheology of blood as well as its circulation in the body. Characterizing the rigidity of the cells and their heterogeneity in a blood sample is thus a key point in the understanding of occlusive phenomena, particularly in the case of erythrocytic diseases in which healthy cells coexist with pathological cells. However, measuring intracellular rheology in small biological compartments requires the development of specific techniques. We propose a technique based on molecular rotors - viscosity-sensitive fluorescent probes - to evaluate the above key point. DASPI molecular rotor has been identified with spectral fluorescence properties decoupled from those of hemoglobin, the main component of the cytosol. After validation of the rotor as a viscosity probe in model fluids, we showed by confocal microscopy that, in addition to binding to the membrane, the rotor penetrates spontaneously and uniformly into red blood cells. Experiments on red blood cells whose rigidity is varied with temperature, show that molecular rotors can detect variations in their overall rigidity. A simple model allowed us to separate the contribution of the cytosol from that of the membrane, allowing a qualitative determination of the variation of cytosol viscosity with temperature, consistent with independent measurements of the viscosity of hemoglobin solutions. Our experiments show that the rotor can be used to study the intracellular rheology of red blood cells at the cellular level, as well as the heterogeneity of this stiffness in a blood sample. This opens up new possibilities for biomedical applications, diagnosis and disease monitoring.
Collapse
Affiliation(s)
- Alice Briole
- Laboratoire Matière et Systèmes Complexes, UMR 7057 CNRS - Université de Paris, 75013 Paris, France.
| | - Thomas Podgorski
- Laboratoire Rhéologie et Procédés, UMR 5520 CNRS-UGA-G.INP - Domaine Universitaire, BP 53 38041 Grenoble Cedex 9, France.
| | - Bérengère Abou
- Laboratoire Matière et Systèmes Complexes, UMR 7057 CNRS - Université de Paris, 75013 Paris, France.
| |
Collapse
|
8
|
Pinho D, Rodrigues RO, Faustino V, Yaginuma T, Exposto J, Lima R. Red blood cells radial dispersion in blood flowing through microchannels: The role of temperature. J Biomech 2015; 49:2293-2298. [PMID: 26671221 DOI: 10.1016/j.jbiomech.2015.11.037] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2015] [Accepted: 11/07/2015] [Indexed: 01/22/2023]
Abstract
The behavior of suspensions of individual blood cells, such as red blood cells (RBCs), flowing through microvessels and microfluidic systems depend strongly on the hematocrit (Hct), microvessel topology and cell properties. Although it is well known that blood rheological properties are temperature dependent, to the best of our knowledge no work has studied the role of the temperature on the RBCs dispersion. A powerful way to investigate this latter effect is through a high-speed video microscopy system, which provides detailed flow measurements of each individual RBC. Hence, the effect of temperature on the RBCs dispersion flowing through a 100μm glass capillary was examined by means of a confocal micro-PTV system. Hundreds of labeled RBCs were tracked at moderate Hct (12%) and at four different temperatures, i.e., 25°C, 32°C, 37°C and 42°C. The results yielded an enhancement of the RBCs diffusion as the temperature increases. Hence, our findings show that RBCs radial dispersion is temperature dependent and as a result the temperature should not be ignored in future blood flow studies. We believe that this finding is important for a better understanding of blood mass transport mechanisms under both physiological and pathological conditions.
Collapse
Affiliation(s)
- Diana Pinho
- Polytechnic Institute of Bragança, ESTiG/IPB, C. Sta. Apolónia, 5301-857 Bragança, Portugal; CEFT, Faculdade de Engenharia da Universidade do Porto (FEUP), R. Dr. Roberto Frias, 4200-465 Porto, Portugal
| | - Raquel O Rodrigues
- Polytechnic Institute of Bragança, ESTiG/IPB, C. Sta. Apolónia, 5301-857 Bragança, Portugal; LCM - Laboratory of Catalysis and Materials - Associate Laboratory LSRE/LCM, Faculdade de Engenharia, da Universidade do Porto (FEUP), R. Dr. Roberto Frias, 4200-465 Porto, Portugal
| | - Vera Faustino
- Unidade de Investigação em Microssistemas Eletromecânicos (MEMS), Campus de Azurém, 4800-058 Guimarães, Portugal
| | - Tomoko Yaginuma
- Polytechnic Institute of Bragança, ESTiG/IPB, C. Sta. Apolónia, 5301-857 Bragança, Portugal
| | - José Exposto
- Polytechnic Institute of Bragança, ESTiG/IPB, C. Sta. Apolónia, 5301-857 Bragança, Portugal
| | - Rui Lima
- Polytechnic Institute of Bragança, ESTiG/IPB, C. Sta. Apolónia, 5301-857 Bragança, Portugal; CEFT, Faculdade de Engenharia da Universidade do Porto (FEUP), R. Dr. Roberto Frias, 4200-465 Porto, Portugal; MEtRiCS, DME, School of Engineering, University of Minho, Campus de Azurém, 4800-058 Guimarães, Portugal.
| |
Collapse
|
9
|
Pershin SM. Ortho-para spin conversion of H2O in aqueous solutions as a quantum factor of the Konovalov paradox. Biophysics (Nagoya-shi) 2015. [DOI: 10.1134/s0006350914060165] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
|
10
|
NMR-based molecular ruler for determining the depth of intercalants within the lipid bilayer. Part V: A comparison of liposomes, bioliposomes and erythrocyte ghosts. Chem Phys Lipids 2014; 184:52-60. [DOI: 10.1016/j.chemphyslip.2014.10.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2014] [Revised: 10/06/2014] [Accepted: 10/08/2014] [Indexed: 11/20/2022]
|
11
|
Nesterov SV, Skorobogatova YA, Yaguzhinsky LS. Specific properties of the mitochondrial oxidative phosphorylation system operating as a supercomplex. Biophysics (Nagoya-shi) 2014. [DOI: 10.1134/s0006350914060141] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
|
12
|
Picosecond dynamics in haemoglobin from different species: A quasielastic neutron scattering study. Biochim Biophys Acta Gen Subj 2014; 1840:2989-99. [DOI: 10.1016/j.bbagen.2014.06.007] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2014] [Revised: 06/10/2014] [Accepted: 06/11/2014] [Indexed: 11/22/2022]
|
13
|
Pershin SM. Effect of quantum differences of ortho and para H2O spin-isomers on water properties: Biophysical aspect. Biophysics (Nagoya-shi) 2014. [DOI: 10.1134/s0006350913050114] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
|
14
|
Bassam R, Digel I, Hescheler J, Artmann AT, Artmann GM. Effects of spermine NONOate and ATP on protein aggregation: light scattering evidences. BMC BIOPHYSICS 2013; 6:1. [PMID: 23289636 PMCID: PMC3561150 DOI: 10.1186/2046-1682-6-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/09/2012] [Accepted: 12/18/2012] [Indexed: 11/10/2022]
Abstract
UNLABELLED BACKGROUND AND OBJECTIVE Regulating protein function in the cell by small molecules, provide a rapid, reversible and tunable tool of metabolic control. However, due to its complexity the issue is poorly studied so far. The effects of small solutes on protein behavior can be studied by examining changes of protein secondary structure, in its hydrodynamic radius as well as its thermal aggregation. The study aim was to investigate effects of adenosine-5'-triphosphate (ATP), spermine NONOate (NO donor) as well as sodium/potassium ions on thermal aggregation of albumin and hemoglobin. To follow aggregation of the proteins, their diffusion coefficients were measured by quasi-elastic light scattering (QELS) at constant pH (7.4) in the presence of solutes over a temperature range from 25°C to 80°C. RESULTS AND DISCUSSION 1) Spermine NONOate persistently decreased the hemoglobin aggregation temperature Tairrespectively of the Na+/K+ environment, 2) ATP alone had no effect on the protein's thermal stability but it facilitated protein's destabilization in the presence of spermine NONOate and 3) mutual effects of ATP and NO were strongly influenced by particular buffer ionic compositions. CONCLUSION The ATP effect on protein aggregation was ambiguous: ATP alone had no effect on the protein's thermal stability but it facilitated protein's destabilization in the presence of nitric oxide. The magnitude and direction of the observed effects strongly depended on concentrations of K+ and Na+ in the solution.
Collapse
Affiliation(s)
- Rasha Bassam
- Institute of Bioengineering (IFB), Aachen University of Applied Sciences, 52428 Juelich, Germany.
| | | | | | | | | |
Collapse
|
15
|
Bassam R, Hescheler J, Temiz-Artmann A, Artmann GM, Digel I. Effects of spermine NONOate and ATP on the thermal stability of hemoglobin. BMC BIOPHYSICS 2012; 5:16. [PMID: 22929146 PMCID: PMC3443461 DOI: 10.1186/2046-1682-5-16] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/03/2012] [Accepted: 08/17/2012] [Indexed: 12/21/2022]
Abstract
Background Minor changes in protein structure induced by small organic and inorganic molecules can result in significant metabolic effects. The effects can be even more profound if the molecular players are chemically active and present in the cell in considerable amounts. The aim of our study was to investigate effects of a nitric oxide donor (spermine NONOate), ATP and sodium/potassium environment on the dynamics of thermal unfolding of human hemoglobin (Hb). The effect of these molecules was examined by means of circular dichroism spectrometry (CD) in the temperature range between 25°C and 70°C. The alpha-helical content of buffered hemoglobin samples (0.1 mg/ml) was estimated via ellipticity change measurements at a heating rate of 1°C/min. Results Major results were: 1) spermine NONOate persistently decreased the hemoglobin unfolding temperature Tuirrespectively of the Na + /K + environment, 2) ATP instead increased the unfolding temperature by 3°C in both sodium-based and potassium-based buffers and 3) mutual effects of ATP and NO were strongly influenced by particular buffer ionic compositions. Moreover, the presence of potassium facilitated a partial unfolding of alpha-helical structures even at room temperature. Conclusion The obtained data might shed more light on molecular mechanisms and biophysics involved in the regulation of protein activity by small solutes in the cell.
Collapse
Affiliation(s)
- Rasha Bassam
- Institute of Bioengineering (IFB), Aachen University of Applied Sciences, 52428 Juelich, Germany.
| | | | | | | | | |
Collapse
|
16
|
Fibrinogen effects on erythrocyte nitric oxide mobilization in presence of acetylcholine. Life Sci 2012; 91:1017-22. [PMID: 22796369 DOI: 10.1016/j.lfs.2012.06.035] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2011] [Revised: 06/25/2012] [Accepted: 06/27/2012] [Indexed: 11/20/2022]
Abstract
AIMS The objectives of this study were to evaluate the effects of high fibrinogen concentration on erythrocyte deformability on mobilization of nitric oxide (NO) and of its metabolites in the presence of acetylcholine (ACh) in healthy human blood samples. MAIN METHODS Levels of NO were evaluated by amperometric method. Nitrite, nitrate and S-nitrosoglutathione (GSNO) were measured using the spectrophotometric Griess reaction. Erythrocyte deformability was determined using the Rheodyn SSD laser diffractometer. KEY FINDINGS In the presence of high concentrations of fibrinogen and ACh (10 μM) in the blood samples from healthy humans the erythrocyte nitrites, nitrates and GSNO concentrations increased without significant changes in NO efflux. Mobilization of NO in erythrocytes' presence was enhanced in the presence of ACh and high fibrinogen levels. SIGNIFICANCE These results suggest that during inflammation when both ACh and high levels of fibrinogen are present, NO delivery by erythrocytes might be compromised by their NO scavenging ability that acts as a compensatory mechanism against the overproduced NO by endothelial inducible nitric oxide synthase.
Collapse
|
17
|
Stadler AM, Garvey CJ, Bocahut A, Sacquin-Mora S, Digel I, Schneider GJ, Natali F, Artmann GM, Zaccai G. Thermal fluctuations of haemoglobin from different species: adaptation to temperature via conformational dynamics. J R Soc Interface 2012; 9:2845-55. [PMID: 22696485 PMCID: PMC3479923 DOI: 10.1098/rsif.2012.0364] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Thermodynamic stability, configurational motions and internal forces of haemoglobin (Hb) of three endotherms (platypus, Ornithorhynchus anatinus; domestic chicken, Gallus gallus domesticus and human, Homo sapiens) and an ectotherm (salt water crocodile, Crocodylus porosus) were investigated using circular dichroism, incoherent elastic neutron scattering and coarse-grained Brownian dynamics simulations. The experimental results from Hb solutions revealed a direct correlation between protein resilience, melting temperature and average body temperature of the different species on the 0.1 ns time scale. Molecular forces appeared to be adapted to permit conformational fluctuations with a root mean square displacement close to 1.2 Å at the corresponding average body temperature of the endotherms. Strong forces within crocodile Hb maintain the amplitudes of motion within a narrow limit over the entire temperature range in which the animal lives. In fully hydrated powder samples of human and chicken, Hb mean square displacements and effective force constants on the 1 ns time scale showed no differences over the whole temperature range from 10 to 300 K, in contrast to the solution case. A complementary result of the study, therefore, is that one hydration layer is not sufficient to activate all conformational fluctuations of Hb in the pico- to nanosecond time scale which might be relevant for biological function. Coarse-grained Brownian dynamics simulations permitted to explore residue-specific effects. They indicated that temperature sensing of human and chicken Hb occurs mainly at residues lining internal cavities in the β-subunits.
Collapse
Affiliation(s)
- A M Stadler
- Institute for Complex Systems (ICS-5: Molecular Biophysics), Forschungszentrum Jülich, Jülich, Germany.
| | | | | | | | | | | | | | | | | |
Collapse
|
18
|
Afri M, Naqqash ME, Frimer AA. Using fluorescence to locate intercalants within the lipid bilayer of liposomes, bioliposomes and erythrocyte ghosts. Chem Phys Lipids 2011; 164:759-65. [PMID: 21939642 DOI: 10.1016/j.chemphyslip.2011.09.002] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2011] [Revised: 08/15/2011] [Accepted: 09/06/2011] [Indexed: 11/15/2022]
Abstract
In previous work, we have shown the utility of the "NMR technique" in locating intercalants within the lipid bilayer. We describe herein the development of a more sensitive and complementary "fluorescence technique" for this purpose and its application to liposomes, bioliposomes and erythrocyte ghosts. This technique is based on the observation in selected compounds of an excellent correlation between the emission wavelength (λ(em)) and Dimroth-Reichardt E(T)(30) polarity parameter for the solvent in which the fluorescence emission spectrum was obtained.
Collapse
Affiliation(s)
- Michal Afri
- Department of Chemistry, Bar Ilan University, Ramat Gan, Israel.
| | | | | |
Collapse
|
19
|
|
20
|
Stadler AM, van Eijck L, Demmel F, Artmann G. Macromolecular dynamics in red blood cells investigated using neutron spectroscopy. J R Soc Interface 2010; 8:590-600. [PMID: 20739313 DOI: 10.1098/rsif.2010.0306] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
We present neutron scattering measurements on the dynamics of haemoglobin (Hb) in human red blood cells (RBCs) in vivo. Global and internal Hb dynamics were measured in the ps to ns time and Å length scales using quasi-elastic neutron backscattering spectroscopy. We observed the cross over from global Hb short-time to long-time self-diffusion. Both short- and long-time diffusion coefficients agree quantitatively with predicted values from the hydrodynamic theory of non-charged hard-sphere suspensions when a bound water fraction of around 0.23 gram H(2)O per gram Hb is taken into account. The higher amount of water in the cells facilitates internal protein fluctuations in the ps time scale when compared with fully hydrated Hb powder. Slower internal dynamics of Hb in RBCs in the ns time range were found to be rather similar to results obtained with fully hydrated protein powders, solutions and Escherichia coli cells.
Collapse
|
21
|
Drozdov AV, Nagorskaya TP, Masyukevich SV, Gorshkov ES. Quantum mechanical aspects of the effects of weak magnetic fields on biological objects. Biophysics (Nagoya-shi) 2010. [DOI: 10.1134/s0006350910040251] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
|
22
|
Stadler AM. Dynamics in Biological Systems as seen by QENS. Z PHYS CHEM 2010. [DOI: 10.1524/zpch.2010.6099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
Abstract
Quasielastic incoherent neutron scattering is a well suited and established experimental method to study protein and water dynamics in the picosecond to nanosecond time- and Ångstrom length-scale. Using deuterium labelling either protein or water motions can be selected and brought into focus. Protein and cell water dynamics were separately studied in red blood cells. A consistent picture of cytoplasmic water and protein dynamics in whole cells is emerging from recent experimental results.
Collapse
|
23
|
From powder to solution: hydration dependence of human hemoglobin dynamics correlated to body temperature. Biophys J 2009; 96:5073-81. [PMID: 19527667 DOI: 10.1016/j.bpj.2009.03.043] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2009] [Revised: 02/25/2009] [Accepted: 03/30/2009] [Indexed: 11/23/2022] Open
Abstract
A transition in hemoglobin (Hb), involving partial unfolding and aggregation, has been shown previously by various biophysical methods. The correlation between the transition temperature and body temperature for Hb from different species, suggested that it might be significant for biological function. To focus on such biologically relevant human Hb dynamics, we studied the protein internal picosecond motions as a response to hydration, by elastic and quasielastic neutron scattering. Rates of fast diffusive motions were found to be significantly enhanced with increasing hydration from fully hydrated powder to concentrated Hb solution. In concentrated protein solution, the data showed that amino acid side chains can explore larger volumes above body temperature than expected from normal temperature dependence. The body temperature transition in protein dynamics was absent in fully hydrated powder, indicating that picosecond protein dynamics responsible for the transition is activated only at a sufficient level of hydration. A collateral result from the study is that fully hydrated protein powder samples do not accurately describe all aspects of protein picosecond dynamics that might be necessary for biological function.
Collapse
|
24
|
Hemoglobin senses body temperature. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2009; 38:589-600. [PMID: 19238378 DOI: 10.1007/s00249-009-0410-8] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2008] [Revised: 01/20/2009] [Accepted: 01/29/2009] [Indexed: 10/21/2022]
Abstract
UNLABELLED When aspirating human red blood cells (RBCs) into 1.3 mum pipettes (DeltaP = -2.3 kPa), a transition from blocking the pipette below a critical temperature T(c) = 36.3 +/- 0.3 degrees C to passing it above the T(c) occurred (micropipette passage transition). With a 1.1 mum pipette no passage was seen which enabled RBC volume measurements also above T(c). With increasing temperature RBCs lost volume significantly faster below than above a T(c) = 36.4 +/- 0.7 (volume transition). Colloid osmotic pressure (COP) measurements of RBCs in autologous plasma (25 degrees C < or = T < or = 39.5 degrees C) showed a T (c) at 37.1 +/- 0.2 degrees C above which the COP rapidly decreased (COP transition). In NMR T(1)-relaxation time measurements, the T(1) of RBCs in autologous plasma changed from a linear (r = 0.99) increment below T(c) = 37 +/- 1 degrees C at a rate of 0.023 s/K into zero slope above T(c) (RBC T(1) transition). IN CONCLUSION An amorphous hemoglobin-water gel formed in the spherical trail, the residual partial sphere of the aspirated RBC. At T(c), a sudden fluidization of the gel occurs. All changes mentioned above happen at a distinct T(c) close to body temperature. The T(c) is moved +0.8 degrees C to higher temperatures when a D(2)O buffer is used. We suggest a mechanism similar to a "glass transition" or a "colloidal phase transition". At T(c), the stabilizing Hb bound water molecules reach a threshold number enabling a partial Hb unfolding. Thus, Hb senses body temperature which must be inscribed in the primary structure of hemoglobin and possibly other proteins.
Collapse
|
25
|
Stadler AM, Digel I, Artmann GM, Embs JP, Zaccai G, Büldt G. Hemoglobin dynamics in red blood cells: correlation to body temperature. Biophys J 2008; 95:5449-61. [PMID: 18708462 PMCID: PMC2586580 DOI: 10.1529/biophysj.108.138040] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
A transition in hemoglobin behavior at close to body temperature has been discovered recently by micropipette aspiration experiments on single red blood cells (RBCs) and circular dichroism spectroscopy on hemoglobin solutions. The transition temperature was directly correlated to the body temperatures of a variety of species. In an exploration of the molecular basis for the transition, we present neutron scattering measurements of the temperature dependence of hemoglobin dynamics in whole human RBCs in vivo. The data reveal a change in the geometry of internal protein motions at 36.9 degrees C, at human body temperature. Above that temperature, amino acid side-chain motions occupy larger volumes than expected from normal temperature dependence, indicating partial unfolding of the protein. Global protein diffusion in RBCs was also measured and the findings compared favorably with theoretical predictions for short-time self-diffusion of noncharged hard-sphere colloids. The results demonstrated that changes in molecular dynamics in the picosecond time range and angstrom length scale might well be connected to a macroscopic effect on whole RBCs that occurs at body temperature.
Collapse
|
26
|
Delcea M, Krastev R, Gutberlet T, Pum D, Sleytr UB, Toca-Herrera JL. Thermal stability, mechanical properties and content of bacterial protein layers recrystallized on polyelectrolyte multilayers. SOFT MATTER 2008; 4:1414-1421. [PMID: 32907106 DOI: 10.1039/b719408k] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The influence of the temperature on the surface topology, layer thickness and density of recrystallized bacterial S-layers from Bacillus sphaericus CCM2177 on polyelectrolyte multilayers in contact with liquid water was investigated. A quartz crystal microbalance with dissipation (QCM-D) was used to monitor the build-up of the polyelectrolyte multilayer and the adsorption of S-layer protein (1600 ng cm-2). The critical temperature (55 °C) at which the S-layer loses its 2-D structure was obtained from atomic force microscopy (AFM) and confirmed by neutron reflectometry (NR) experiments. The process of S-layer denaturation was found to be irreversible. Aggregates of denatured S-proteins resist lower loads than the crystalline nanostructure formed from folded S-proteins. The combination of the QCM-D results with the scattering length density and film thickness (14 nm) obtained from neutron reflectometry studies permitted the estimation of the density of adsorbed S-protein together with the bound water (M = 1.16 g cm-3), the dry protein scattering length density (2.02 × 10-6 Å-2) and the S-protein mass density (1.48 g cm-3). The results confirmed that S-proteins form very loosely packed layers on polyelectrolyte multilayers incorporating a water volume fraction of around 68%.
Collapse
Affiliation(s)
- Mihaela Delcea
- Biosurfaces Unit, CIC BiomaGUNE, Paseo Miramón 182, 20009 San Sebastián, Spain.
| | - Rumen Krastev
- Max-Planck Institute of Colloids and Interfaces, 14424 Golm/Potsdam, Germany
| | - Thomas Gutberlet
- Laboratory for Neutron Scattering, Paul Scherrer Institute, Villigen PSI, CH-5232, Switzerland
| | - Dietmar Pum
- Center for Nanobiotechnology, University of Natural Resources and Applied Life Sciences, Gregor-Mendel Str. 33, A-1180 Vienna, Austria
| | - Uwe Bernd Sleytr
- Center for Nanobiotechnology, University of Natural Resources and Applied Life Sciences, Gregor-Mendel Str. 33, A-1180 Vienna, Austria
| | | |
Collapse
|
27
|
Molecular processes in biological thermosensation. JOURNAL OF BIOPHYSICS 2008; 2008:602870. [PMID: 20130806 PMCID: PMC2814129 DOI: 10.1155/2008/602870] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 02/11/2008] [Accepted: 04/16/2008] [Indexed: 12/30/2022]
Abstract
Since thermal gradients are almost everywhere, thermosensation could represent one of the oldest sensory transduction processes that evolved in organisms. There are many examples of temperature changes affecting the physiology of living cells. Almost all classes of biological macromolecules in a cell (nucleic acids, lipids, proteins) can present a target of the temperature-related stimuli. This review discusses some features of different classes of temperature-sensing molecules as well as molecular and biological processes that involve thermosensation. Biochemical, structural, and thermodynamic approaches are applied in the paper to organize the existing knowledge on molecular mechanisms of thermosensation. Special attention is paid to the fact that thermosensitive function cannot be assigned to any particular functional group or spatial structure but is rather of universal nature. For instance, the complex of thermodynamic, structural, and functional features of hemoglobin family proteins suggests their possible accessory role as “molecular thermometers”.
Collapse
|
28
|
Nonlinear relationship between level of blood flow and skin temperature for different dynamics of temperature change. Biophys J 2008; 94:L78-80. [PMID: 18339767 DOI: 10.1529/biophysj.107.127860] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
We present a study of the relationship between blood flow and skin temperature under different dynamics of skin-temperature-change: locally induced thermal shock and well controlled, gradual change. First, we demonstrate memory phenomena for blood flow and skin temperature under both conditions. Secondly, we point out that the "hysteresis" loops obtained are dependent on initial conditions, indicating physiological response times of more than twenty minutes. We also show that under thermal shock the level of blood flow is preserved up to some characteristic temperature limit, independently of subject.
Collapse
|
29
|
Auth T, Safran SA, Gov NS. Fluctuations of coupled fluid and solid membranes with application to red blood cells. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2007; 76:051910. [PMID: 18233690 DOI: 10.1103/physreve.76.051910] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2007] [Revised: 08/01/2007] [Indexed: 05/21/2023]
Abstract
The fluctuation spectra and the intermembrane interaction of two membranes at a fixed average distance are investigated. Each membrane can either be a fluid or a solid membrane, and in isolation, its fluctuations are described by a bare or a wave-vector-dependent bending modulus, respectively. The membranes interact via their excluded-volume interaction; the average distance is maintained by an external, homogeneous pressure. For strong coupling, the fluctuations can be described by a single, effective membrane that combines the elastic properties. For weak coupling, the fluctuations of the individual, noninteracting membranes are recovered. The case of a composite membrane consisting of one fluid and one solid membrane can serve as a microscopic model for the plasma membrane and cytoskeleton of the red blood cell. We find that, despite the complex microstructure of bilayers and cytoskeletons in a real cell, the fluctuations with wavelengths lambda greater, similar 400 nm are well described by the fluctuations of a single, polymerized membrane (provided that there are no inhomogeneities of the microstructure). The model is applied to the fluctuation data of discocytes ("normal" red blood cells), a stomatocyte, and an echinocyte. The elastic parameters of the membrane and an effective temperature that quantifies active, metabolically driven fluctuations are extracted from the experiments.
Collapse
Affiliation(s)
- Thorsten Auth
- Weizmann Institute of Science, Department of Materials and Interfaces, P.O. Box 26, Rehovot 76100, Israel
| | | | | |
Collapse
|
30
|
Zerlin KFT, Kasischke N, Digel I, Maggakis-Kelemen C, Temiz Artmann A, Porst D, Kayser P, Linder P, Artmann GM. Structural transition temperature of hemoglobins correlates with species' body temperature. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2007; 37:1-10. [PMID: 17390129 DOI: 10.1007/s00249-007-0144-4] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2006] [Revised: 02/01/2007] [Accepted: 02/08/2007] [Indexed: 11/25/2022]
Abstract
Human red blood cells (RBCs) exhibit sudden changes in their biophysical properties at body temperature (T (B)). RBCs were seen to undergo a spontaneous transition from blockage to passage at T (C) = 36.4 +/- 0.3 degrees C, when the temperature dependency of RBC-passages through 1.3 mum narrow micropipettes was observed. Moreover, concentrated hemoglobin solutions (45 g/dl) showed a viscosity breakdown between 36 and 37 degrees C. With human hemoglobin, a structural transition was observed at T (B) as circular dichroism (CD) experiments revealed. This leads to the assumption that a species' body temperature occupies a unique position on the temperature scale and may even be imprinted in the structure of certain proteins. In this study, it was investigated whether hemoglobins of species with a T (B) different from those of human show temperature transitions and whether those were also linked to the species' T (B). The main conclusion was drawn from dynamic light scattering (DLS) and CD experiments. It was observed that such structural temperature transitions did occur in hemoglobins from all studied species and were correlated linearly (slope 0.81, r = 0.95) with the species' body temperature. We presumed that alpha-helices of hemoglobin were able to unfold more readily around T (B). alpha-helical unfolding would initiate molecular aggregation causing RBC passage and viscosity breakdown as mentioned above. Thus, structural molecular changes of hemoglobin could determine biophysical effects visible on a macroscopic scale. It is hypothesized that the species' body temperature was imprinted into the structure of hemoglobins.
Collapse
|
31
|
Digel I, Maggakis-Kelemen C, Zerlin KF, Linder P, Kasischke N, Kayser P, Porst D, Temiz Artmann A, Artmann GM. Body temperature-related structural transitions of monotremal and human hemoglobin. Biophys J 2006; 91:3014-21. [PMID: 16844747 PMCID: PMC1578488 DOI: 10.1529/biophysj.106.087809] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
In this study, temperature-related structural changes were investigated in human, duck-billed platypus (Ornithorhynchus anatinus, body temperature T(b) = 31-33 degrees C), and echidna (Tachyglossus aculeatus, body temperature T(b) = 32-33 degrees C) hemoglobin using circular dichroism spectroscopy and dynamic light scattering. The average hydrodynamic radius (R(h)) and fractional (normalized) change in the ellipticity (F(obs)) at 222 +/- 2 nm of hemoglobin were measured. The temperature was varied stepwise from 25 degrees C to 45 degrees C. The existence of a structural transition of human hemoglobin at the critical temperature T(c) between 36-37 degrees C was previously shown by micropipette aspiration experiments, viscosimetry, and circular dichroism spectroscopy. Based on light-scattering measurements, this study proves the onset of molecular aggregation at T(c). In two different monotremal hemoglobins (echidna and platypus), the critical transition temperatures were found between 32-33 degrees C, which are close to the species' body temperature T(b). The data suggest that the correlation of the structural transition's critical temperature T(c) and the species' body temperature T(b) is not mere coincidence but, instead, is a more widespread structural phenomenon possibly including many other proteins.
Collapse
Affiliation(s)
- I Digel
- Department of Cellular Engineering, University of Applied Sciences Aachen, 52428 Juelich, Germany.
| | | | | | | | | | | | | | | | | |
Collapse
|
32
|
Abstract
The flow-induced mechanical deformation of a human red blood cell (RBC) during thermal transition between room temperature and 42.0 degrees C is interrogated by laser tweezer experiments. Based on the experimental geometry of the deformed RBC, the surface stresses are determined with the aid of computational fluid dynamics simulation. It is found that the RBC is more deformable while heating through 37.0 degrees C to 42.0 degrees C, especially at a higher flow velocity due to a thermal-fluid effect. More importantly, the degree of RBC deformation is irreversible and becomes softer, and finally reaches a plateau (at a uniform flow velocity U > 60 microm s(-1)) after the heat treatment, which is similar to a strain-hardening dominated process. In addition, computational simulated stress is found to be dependent on the progression of thermotropic phase transition. Overall, the current study provides new insights into the highly coupled temperature and hydrodynamic effects on the biomechanical properties of human erythrocyte in a model hydrodynamic flow system.
Collapse
Affiliation(s)
- Ji-Jinn Foo
- Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG), Pfotenhauerstrasse 108, 01307 Dresden, Germany
| | | | | | | |
Collapse
|
33
|
Liau A, Karnik R, Majumdar A, Cate JHD. Mixing Crowded Biological Solutions in Milliseconds. Anal Chem 2005; 77:7618-25. [PMID: 16316169 DOI: 10.1021/ac050827h] [Citation(s) in RCA: 72] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
In vitro studies of biological reactions are rarely performed in conditions that reflect their native intracellular environments where macromolecular crowding can drastically change reaction rates. Kinetics experiments require reactants to be mixed on a time scale faster than that of the reaction. Unfortunately, highly concentrated solutions of crowding agents such as bovine serum albumin and hemoglobin that are viscous and sticky are extremely difficult to mix rapidly. We demonstrate a new droplet-based microfluidic mixer that induces chaotic mixing of crowded solutions in milliseconds due to protrusions of the microchannel walls that generate oscillating interfacial shear within the droplets. Mixing in the microfluidic mixer is characterized, mechanisms underlying mixing are discussed, and evidence of biocompatibility is presented. This microfluidic platform will allow for the first kinetic studies of biological reactions with millisecond time resolution under conditions of macromolecular crowding similar to those within cells.
Collapse
Affiliation(s)
- Albert Liau
- Biophysics Program, Department of Mechanical Engineering, University of California, Berkeley, 94720, USA
| | | | | | | |
Collapse
|
34
|
Artmann GM, Burns L, Canaves JM, Temiz-Artmann A, Schmid-Schönbein GW, Chien S, Maggakis-Kelemen C. Circular dichroism spectra of human hemoglobin reveal a reversible structural transition at body temperature. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2004; 33:490-6. [PMID: 15045474 DOI: 10.1007/s00249-004-0401-8] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2003] [Revised: 03/09/2004] [Accepted: 03/10/2004] [Indexed: 11/29/2022]
Abstract
Previously we have shown that human red blood cells (RBCs) undergo a sudden change from blocking to passing through a 1.3+/-0.2-microm micropipette when applying an aspiration pressure of 2.3 kPa at a critical transition temperature (Tc = 36.4+/-0.3 degrees C). Low-shear viscosity measurements suggested that changes in the molecular properties of hemoglobin might be responsible for this effect. To evaluate structural changes in hemoglobin at the critical temperature, we have used circular dichroism (CD) spectroscopy. The thermal denaturation curves of human hemoglobin A (HbA) and hemoglobin S (HbS) upon heating between 25 and 60 degrees C were non-linear and showed accelerated denaturation between 35 and 39 degrees C with a midpoint at 37.2+/-0.6 degrees C. The transition was reversible below 39 degrees C and independent of solution pH (pH 6.8-7.8). It was also independent of the oxygenation state of hemoglobin, since a sample that was extensively deoxygenated with N2 showed a similar transition by CD. These findings suggest that a structural change in hemoglobin may enable the cellular passage phenomenon as well as the temperature-dependent decrease in viscosity of RBC solutions.
Collapse
Affiliation(s)
- Gerhard M Artmann
- Department of Cellular Engineering, University of Applied Sciences Aachen, Ginsterweg 1, 52428 Jülich, Germany.
| | | | | | | | | | | | | |
Collapse
|
35
|
MacDonald RI, Cummings JA. Stabilities of folding of clustered, two-repeat fragments of spectrin reveal a potential hinge in the human erythroid spectrin tetramer. Proc Natl Acad Sci U S A 2004; 101:1502-7. [PMID: 14747656 PMCID: PMC341761 DOI: 10.1073/pnas.0308059100] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2003] [Indexed: 12/17/2022] Open
Abstract
The large size of spectrin, the flexible protein promoting reversible deformation of red cells, has been an obstacle to elucidating the molecular mechanism of its function. By studying cloned fragments of the repeating unit domain, we have found a correspondence between positions of selected spectrin repeats in a tetramer with their stabilities of folding. Six fragments consisting of two spectrin repeats were selected for study primarily on the basis of the predicted secondary structures of their linker regions. Fragments with a putatively helical linker were more stable to urea- and heat-induced unfolding than those with a putatively nonhelical linker. Two of the less stably folded fragments, human erythroid alpha-spectrin repeats 13 and 14 (HEalpha13,14) and human erythroid beta-spectrin repeats 8 and 9 (HEbeta8,9), are located opposite each other on antiparallel spectrin dimers. At least partial unfolding of these repeats under physiological conditions indicates that they may serve as a hinge. Also less stably folded, the fragment of human erythroid alpha-spectrin repeats 4 and 5 (HEalpha4,5) lies opposite the site of interaction between the partial repeats at the C- and N-terminal ends of beta- and alpha-spectrin, respectively, on the opposing dimer. More stably folded fragments, human erythroid alpha-spectrin repeats 1 and 2 (HEalpha1,2) and human erythroid alpha-spectrin repeats 2 and 3 (HEalpha2,3), lie nearly opposite each other on antiparallel spectrin dimers of a tetramer. These clusterings along the spectrin tetramer of repeats with similar stabilities of folding may have relevance for spectrin function, particularly for its well known flexibility.
Collapse
Affiliation(s)
- Ruby I MacDonald
- Department of Biochemistry, Molecular Biology, and Cell Biology, Northwestern University, Evanston, IL 60208, USA.
| | | |
Collapse
|
36
|
Kuzman D, Svetina S, Waugh RE, Zeks B. Elastic properties of the red blood cell membrane that determine echinocyte deformability. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2003; 33:1-15. [PMID: 13680208 DOI: 10.1007/s00249-003-0337-4] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2003] [Accepted: 06/14/2003] [Indexed: 11/29/2022]
Abstract
The natural biconcave shape of red blood cells (RBC) may be altered by injury or environmental conditions into a spiculated form (echinocyte). An analysis is presented of the effect of such a transformation on the resistance of RBC to entry into capillary sized cylindrical tubes. The analysis accounts for the elasticity of the membrane skeleton in dilation and shear, and the local and nonlocal resistance of the bilayer to bending, the latter corresponding to different area strains in the two leaflets of the bilayer. The shape transformation is assumed to be driven by the equilibrium area difference (delta A(0), the difference between the equilibrium areas of the bilayer leaflets), which also affects the energy of deformation. The cell shape is approximated by a parametric model. Shape parameters, skeleton shear deformation, and the skeleton density of deformed membrane relative to the skeleton density of undeformed membrane are obtained by minimization of the corresponding thermodynamic potential. Experimentally, delta A(0) is modified and the corresponding discocyte-echinocyte shape transition obtained by high-pressure aspiration into a narrow pipette, and the deformability of the resulting echinocyte is examined by whole cell aspiration into a larger pipette. We conclude that the deformability of the echinocyte can be accounted for by the mechanical behavior of the normal RBC membrane, where the equilibrium area difference delta A(0) is modified.
Collapse
Affiliation(s)
- D Kuzman
- Institute of Biophysics, Faculty of Medicine, University of Ljubljana, Lipiceva 2, 1000, Ljubljana, Slovenia.
| | | | | | | |
Collapse
|
37
|
Piagnerelli M, Boudjeltia KZ, Vanhaeverbeek M, Vincent JL. Red blood cell rheology in sepsis. Intensive Care Med 2003; 29:1052-61. [PMID: 12802488 DOI: 10.1007/s00134-003-1783-2] [Citation(s) in RCA: 113] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 03/27/2003] [Indexed: 12/25/2022]
Abstract
Changes in red blood cell (RBC) function can contribute to alterations in microcirculatory blood flow and cellular dysoxia in sepsis. Decreases in RBC and neutrophil deformability impair the passage of these cells through the microcirculation. While the role of leukocytes has been the focus of many studies in sepsis, the role of erythrocyte rheological alterations in this syndrome has only recently been investigated. RBC rheology can be influenced by many factors, including alterations in intracellular calcium and adenosine triphosphate (ATP) concentrations, the effects of nitric oxide, a decrease in some RBC membrane components such as sialic acid, and an increase in others such as 2,3 diphosphoglycerate. Other factors include interactions with white blood cells and their products (reactive oxygen species), or the effects of temperature variations. Understanding the mechanisms of altered RBC rheology in sepsis, and the effects on blood flow and oxygen transport, may lead to improved patient management and reductions in morbidity and mortality.
Collapse
Affiliation(s)
- M Piagnerelli
- Department of Intensive Care, Erasme University Hospital, Free University of Brussels, 808 route de Lennik, 1070, Brussels, Belgium
| | | | | | | |
Collapse
|
38
|
Maggakis-Kelemen C, Bork M, Kayser P, Biselli M, Artmann GM. Biological and mechanical quality of red blood cells cultured from human umbilical cord blood stem cells. Med Biol Eng Comput 2003; 41:350-6. [PMID: 12803302 DOI: 10.1007/bf02348442] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Human umbilical cord blood (CB) has moved from the status of biological waste to that of a valuable source of haematopoietic stem (HS) cells. There are potentially three major clinical applications for HS cells and ex vivo-expanded HS cells: reconstitution of haematopoiesis in patients undergoing chemotherapy; gene therapy (e.g. in thalassaemia, sickle cell anaemia); and large-scale production of mature blood cells. Erythropoiesis is accomplished by highly complex interactions of haematopoietic progenitor cells, stromal cells and cytokines in the bone marrow. Among them, erythropoietin is the principal regulator. Ex vivo cell culture experiments to obtain mature red blood cells were the focus of this study. Attempts to elucidate appropriate medium components and amounts of haematopoietic growth factors were successful: enucleated and haemoglobin-filled erythroid cells were obtained from primitive HS cells. Dimethylsulphoxide (DMSO) was found to be of particular importance as an efficient differentiation inducer. The differentiation process was followed microscopically and by fluorescence-activated cell sorting (FACS). Using the micropipette aspiration technique, the elastic properties of erythroid cells were evaluated as erythropoiesis progressed. Discocyte-like cells, comprising reticulocytes and finally differentiated red blood cells, showed an about ten-fold higher membrane shear modulus compared with control cells.
Collapse
Affiliation(s)
- C Maggakis-Kelemen
- Cell Biophysics, Department of Cellular Engineering, University of Applied Sciences Aachen, Germany.
| | | | | | | | | |
Collapse
|
39
|
Maggakis-Kelemen C, Biselli M, Artmann GM. Determination of the elastic shear modulus of cultured human red blood cells. BIOMED ENG-BIOMED TE 2003; 47 Suppl 1 Pt 1:106-9. [PMID: 12451786 DOI: 10.1515/bmte.2002.47.s1a.106] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
In this study we investigated the mechanical properties of in vitro cultured red blood cells (RBCs) in a liquid system. We used human umbilical cord blood as a highly efficient source of hematopoietic stem cells (HS). Our first goal was to establish an optimal medium composition in order to yield finally differentiated RBCs, i.e. enucleated and hemoglobin-filled cells. Different stages of cell differentiation were distinguished based on morphological observations and flow cytometry measurements. By means of the micropipette aspiration technique we estimated the deformability characteristics of the cultured cells. Up to the stage of oxiphilic normoblasts they readily deformed. Reticulocytes and mature RBCs showed an enhanced stiffness as compared to RBCs obtained from donors.
Collapse
|
40
|
Kelemen C, Chien S, Artmann GM. Temperature transition of human hemoglobin at body temperature: effects of calcium. Biophys J 2001; 80:2622-30. [PMID: 11371439 PMCID: PMC1301450 DOI: 10.1016/s0006-3495(01)76232-7] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
We studied the effects of calcium ion concentration on the temperature dependence of rheological behavior of human red blood cells (RBCs) and concentrated hemoglobin solutions. Our previous study (G. M. Artmann, C. Kelemen, D. Porst, G. Büldt, and S. Chien, 1998, Biophys. J., 75:3179-3183) showed a critical temperature (Tc) of 36.4 +/- 0.3 degrees C at which the RBCs underwent a transition from non-passage to passage through 1.3 microm micropipettes in response to an aspiration pressure of -2.3 kPa. An increase in intracellular Ca2+ concentration by using the ionophore A23187 reduced the passability of intact RBCs through small micropipettes above T(c); the micropipette diameter needed for >90% passage increased to 1.7 microm. Viscometry of concentrated hemoglobin solutions (45 and 50 g/dl) showed a sudden viscosity transition at 36 +/- 1 degrees C (Tc(eta)) at all calcium concentrations investigated. Below Tc(eta), the viscosity value of the concentrated hemoglobin solution at 1.8 mM Ca(2+) was higher than that at other concentrations (0.2 microM, 9 mM, and 18 mM). Above Tc(eta), the viscosity was almost Ca2+ independent. At 1.8 mM Ca2+ and 36 +/- 1 degrees C, the activation energy calculated from the viscometry data showed a strong dependence on the hemoglobin concentration. We propose that the transition of rheological behavior is attributable to a high-to-low viscosity transition mediated by a partial release of the hemoglobin-bound water.
Collapse
Affiliation(s)
- C Kelemen
- Department of Cell Biophysics, University of Applied Sciences Aachen, D-52428 Juelich, Germany.
| | | | | |
Collapse
|
41
|
Abstract
The erythrocyte membrane's ability to withstand the stresses of circulation has its origins in various levels of structural organization. Central to this membrane's structure-function relationships is a quasi-two-dimensional meshwork of spectrin-actin-protein 4.1 that imparts a resilence to the overlying plasma membrane. New insights into the nonlinear microelasticity of this substructure are being provided by experiments that range from elegant atomic force microscopy tests of single spectrin chains to patterned photobleaching of the micropipette-deformed network. Breakthroughs in atomic level structure determinations are further complemented by emerging biophysical studies of transgenically engineered mice lacking specific erythrocyte membrane proteins. Recent theoretical efforts (computational approaches most notably) also have begun to correlate molecular scale aspects of structure with mechanical measures. All of this recent activity in the biophysics of erythrocyte structure-function is certain to challenge and refine some of the most basic tenets in cell membrane structure-function.
Collapse
Affiliation(s)
- D E Discher
- Institute for Medicine and Engineering and School of Applied Science and Engineering, University of Pennsylvania, Philadelphia 19104-6315, USA
| |
Collapse
|
42
|
Lee JC, Wong DT, Discher DE. Direct measures of large, anisotropic strains in deformation of the erythrocyte cytoskeleton. Biophys J 1999; 77:853-64. [PMID: 10423431 PMCID: PMC1300377 DOI: 10.1016/s0006-3495(99)76937-7] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Abstract
The erythrocyte's spectrin-actin membrane skeleton is directly shown to be capable of sustaining large, anisotropic strains. Photobleaching of an approximately 1-micrometer stripe in rhodamine phalloidin-labeled actin appears stable up to at least 37 degrees C, and is used to demonstrate large in-surface stretching during elastic deformation of the skeleton. Principal extension or stretch ratios of at least approximately 200% and contractions down to approximately 40%, both referenced to an essentially undistorted cell, are visually demonstrated in micropipette-imposed deformation. Such anisotropic straining is seen to be consistent at a qualitative level with now classic analyses (Evans. 1973. Biophys. J. 13:941-954) and is generally nonhomogeneous though axisymmetric down to the submicron scale. Local, direct measurements of stretching prove quantitatively consistent (within approximately 10%) with integrated estimates that are based simply on a measured relative density distribution of actin. The measurements are also in close agreement with direct computation of mean spectrin chain extension in full statistical mechanical simulations of a coarse-grained network held in a micropipette. Finally, as a cell thermally fragments near approximately 48 degrees C, the patterned photobleaching demonstrates a destructuring of the surface network in a process that is more readily attributable to transitions in spectrin than in F-actin.
Collapse
Affiliation(s)
- J C Lee
- Institute for Medicine and Engineering, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | | | | |
Collapse
|