1
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Guzmán Ramírez JE, Mancilla Percino T. Synthesis of N-aminophalimides derived from α-amino acids: Theoretical study to find them as HDAC8 inhibitors by docking simulations and in vitro assays. Chem Biol Drug Des 2023; 102:1367-1386. [PMID: 37641461 DOI: 10.1111/cbdd.14323] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2023] [Revised: 08/02/2023] [Accepted: 08/03/2023] [Indexed: 08/31/2023]
Abstract
Phthalimides are valuable for synthesis and biological properties. New acetamides 3(a-c) and 4(a-c) were synthesized and characterized as precursors for novel N-aminophalimides 5(a-c) and 6(a-c). Structures of 4a, 5(a-b), and 6(a-b) were confirmed by single crystal X-ray. Docking studies identified compounds with favorable Gibbs free energy values for binding to histone deacetylase 8 (HDAC8), an enzyme targeted for anticancer drug development. These compounds bound to both the orthosteric and allosteric pockets of HDAC8, similar to Trichostatin A (TSA), an HDAC8 inhibitor. 6(a-c) contain hydroxyacetamide moiety as a zinc-binding group, a phthalimide moiety as a capping group, and aminoacetamide moiety as a linker group, which are important for ligand-receptor binding. ΔG values indicated that compounds 5b, 6b, and 6c had higher affinity for HDAC8 in the allosteric pocket compared to TSA. In vitro evaluation of inhibitory activities on HDAC8 revealed that compounds 3(a-c) and 5(a-c) showed similar inhibitory effects (IC50 ) ranging from 0.445 to 0.751 μM. Compounds 6(a-c) showed better affinity, with 6a (IC50 = 28 nM) and 6b (IC50 = 0.18 μM) showing potent inhibitory effects slightly lower than TSA (IC50 = 26 nM). These findings suggest that the studied compounds hold promise as potential candidates for further biological investigations.
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Affiliation(s)
- José Eduardo Guzmán Ramírez
- Departamento de Química, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Ciudad de México, Mexico
| | - Teresa Mancilla Percino
- Departamento de Química, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Ciudad de México, Mexico
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2
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Bhosle MR, Palke A, Bondle GM, Sarkate AP, Azad R, Burra PVLS. Efficient Synthesis of Densely Functionalized Pyrido[2,3-d]Pyrimidines via Three-component One-pot Domino Knoevenagel aza-Diels Alder Reaction and Induces Apoptosis in Human Cancer Cell Lines via Inhibiting Aurora A and B Kinases. Polycycl Aromat Compd 2022. [DOI: 10.1080/10406638.2022.2143538] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Manisha R. Bhosle
- Department of Chemistry, Dr. Babasaheb Ambedkar, Marathwada University, Aurangabad, India
| | - Amruta Palke
- Department of Chemistry, Dr. Babasaheb Ambedkar, Marathwada University, Aurangabad, India
| | - Giribala M. Bondle
- Department of Chemistry, Dr. Babasaheb Ambedkar, Marathwada University, Aurangabad, India
| | - Aniket P. Sarkate
- Department of Chemical Technology, Dr. Babasaheb Ambedkar, Marathwada University, Aurangabad, India
| | - Rajaram Azad
- Department of Animal Biology, University of Hyderabad, Hyderabad, India
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3
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Madhu D, Jetti VR, Narsaiah B, Punna N. 3-Trifluoroacetyl-quinolin-2(1 H)-ones as Carbonyl and Acid Surrogates in the Passerini-/Ugi-Type Reaction. J Org Chem 2022; 87:2301-2314. [PMID: 35157465 DOI: 10.1021/acs.joc.1c02107] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Herein, we report tailored 3-trifluoroacetyl-quinolin-2(1H)-ones (1) as carbonyl and acid surrogates in Passerini- and Ugi-type reactions for the synthesis of α-trifluoromethyl-α-hydroxy carboxamides (4) and α-trifluoromethyl α-amino acids (6) in high yields, respectively. The reaction proceeds under mild reaction conditions via an exocyclic carboximidate intermediate (3). The amide group in compound 1 acts as an acid component as well as a reversible oxygen nucleophile to facilitate the reaction.
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Affiliation(s)
- Desagoni Madhu
- Department of Organic Synthesis & Process Chemistry, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad 500007, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Vatsala Rani Jetti
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Banda Narsaiah
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Nagender Punna
- Department of Organic Synthesis & Process Chemistry, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad 500007, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
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4
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Barna B, Gáti T, Kotschy A, Tasnádi G. Chemo‐enzymatic One‐Pot Two‐Step Functionalization of 1,2,3,4‐Tetrahydroisoquinolines by Monoamine Oxidase‐Ugi‐Joullié‐reaction Sequence. European J Org Chem 2022. [DOI: 10.1002/ejoc.202101545] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Bence Barna
- Servier Research Institute of Medicinal Chemistry Servier Research Institute of Medicinal Chemistry Záhony utca 7 1031 HUNGARY
| | - Tamás Gáti
- Servier Research Institute of Medicinal Chemistry Servier Research Institute of Medicinal Chemistry Záhony utca 7 1031 HUNGARY
| | - András Kotschy
- Servier Research Institute of Medicinal Chemistry Servier Research Institute of Medicinal Chemistry Záhony utca 7 1031 HUNGARY
| | - Gábor Tasnádi
- Servier Research Institute of Medicinal Chemistry Servier Research Institute of Medicinal Chemistry Záhony utca 7 1031 Budapest HUNGARY
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5
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One-pot synthesis of polysubstituted quinazolin-4(3H)-ones via sequential oxidative Ugi/Staudinger/aza-Wittig reactions starting from tertiary amines. Tetrahedron 2021. [DOI: 10.1016/j.tet.2021.132368] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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6
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Pan N, Xinen Lee M, Bunel L, Grimaud L, Vitale MR. Electrochemical TEMPO-Catalyzed Oxidative Ugi-Type Reaction. ACS ORGANIC & INORGANIC AU 2021; 1:18-22. [PMID: 36855635 PMCID: PMC9954374 DOI: 10.1021/acsorginorgau.1c00003] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Oxidative isocyanide-based multicomponent reactions (oxidative IMCRs) are very useful tools for the rapid construction of molecular diversity starting from readily available and stable substrates. Despite all their benefits, such multicomponent reactions are underdeveloped and strictly limited to 3-component processes. Indeed, in the presence of several reaction partners, the oxidation event needs to be rigorously chemoselective, which becomes incredibly more intricate as the number of reactive components increases. Nonetheless, we could overcome this significant pitfall and reach the first oxidative Ugi-type 4-IMCR by capitalizing on a very mild and green TEMPO-catalyzed electro-oxidation process. Employing alcohols as aldehyde surrogates and in the notable absence of any supporting electrolyte, this transformation proved to be extremely chemoselective in the presence of an amine and was compatible with a wide range of alcohols, amines, isocyanides, and carboxylic acids.
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Affiliation(s)
- Na Pan
- Laboratoire des
biomolécules, LBM, Département de chimie, École
Normale Supérieure, PSL University,
Sorbonne Université, CNRS, 75005 Paris, France,Shanghai Engineering Research Center of Molecular Therapeutics and
New Drug Development, SCME, East China Normal
University, 3663 Zhongshanbei Road, Shanghai 200062, China
| | - Maegan Xinen Lee
- Laboratoire des
biomolécules, LBM, Département de chimie, École
Normale Supérieure, PSL University,
Sorbonne Université, CNRS, 75005 Paris, France
| | - Louis Bunel
- Laboratoire des
biomolécules, LBM, Département de chimie, École
Normale Supérieure, PSL University,
Sorbonne Université, CNRS, 75005 Paris, France
| | - Laurence Grimaud
- Laboratoire des
biomolécules, LBM, Département de chimie, École
Normale Supérieure, PSL University,
Sorbonne Université, CNRS, 75005 Paris, France,
| | - Maxime R. Vitale
- Laboratoire des
biomolécules, LBM, Département de chimie, École
Normale Supérieure, PSL University,
Sorbonne Université, CNRS, 75005 Paris, France,
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7
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Singh P, Mritunjay. Progress of Dialkyl Azodicarboxylates in Organic Transformations. ASIAN J ORG CHEM 2021. [DOI: 10.1002/ajoc.202100104] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Pushpinder Singh
- Department of Chemistry DAV University, Jalandhar Jalandhar-Pathankot National highway, Sarmastpur Jalandhar Punjab 144012 India
| | - Mritunjay
- Department of Chemistry DAV University, Jalandhar Jalandhar-Pathankot National highway, Sarmastpur Jalandhar Punjab 144012 India
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8
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Srinivasulu C, Sagar NR, Vishwanatha TM, Durgamma S, Sureshbabu VV. Synthesis of N β-Protected Amino Sulfenyl Methyl Formamides and Sulfonyl Methyl Formamides: A Simple Protocol. ACS OMEGA 2021; 6:4680-4686. [PMID: 33644575 PMCID: PMC7905828 DOI: 10.1021/acsomega.0c05419] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/06/2020] [Accepted: 01/22/2021] [Indexed: 06/12/2023]
Abstract
Chiral amino acid-derived formamides represent one of the most versatile components in multicomponent reactions. Herein, we describe a facile synthesis of Nβ-protected amino sulfenyl methyl formamides and sulfonyl methyl formamides via the Mannich reaction of Nα-protected amino alkyl thiols followed by oxidation using 3-chloroperbenzoic acid (m-CPBA). This protocol is applicable to a wide range of Fmoc- and Cbz-protected amino acids. Notably, the reaction provides high yield and retains the stereochemistry of the chiral center of the starting component.
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9
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Flores-Reyes JC, Islas-Jácome A, González-Zamora E. The Ugi three-component reaction and its variants. Org Chem Front 2021. [DOI: 10.1039/d1qo00313e] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
A broad variety of α-aminoamide-based compounds have been synthesized via the three-component version of the Ugi reaction (U-3CR) or by any of its variants (Ugi-Zhu-3CR, Orru-3CR, Ugi-4C-3CR, Ugi-Joullié-3CR, GBB-3CR, Ugi-Reissert-3CR, and so on).
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Affiliation(s)
- Julio César Flores-Reyes
- Departamento de Química, Universidad Autónoma Metropolitana-Iztapalapa, San Rafael Atlixco 186, Col. Vicentina, Iztapalapa, C.P. 09340, Ciudad de Mexico
| | - Alejandro Islas-Jácome
- Departamento de Química, Universidad Autónoma Metropolitana-Iztapalapa, San Rafael Atlixco 186, Col. Vicentina, Iztapalapa, C.P. 09340, Ciudad de Mexico
| | - Eduardo González-Zamora
- Departamento de Química, Universidad Autónoma Metropolitana-Iztapalapa, San Rafael Atlixco 186, Col. Vicentina, Iztapalapa, C.P. 09340, Ciudad de Mexico
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10
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Abstract
This review highlights the state-of-the-art advances in C(sp3)–H functionalization involving isocyanides through the synergistic combination of isocyanide insertion and C(sp3)–H bond activation.
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Affiliation(s)
- Weixiang Wang
- Department of Chemistry
- Innovative Drug Research Center
- School of Medicine
- Shanghai University
- Shanghai 200444
| | - Tianqi Liu
- Department of Chemistry
- Innovative Drug Research Center
- School of Medicine
- Shanghai University
- Shanghai 200444
| | - Chang-Hua Ding
- Department of Chemistry
- Innovative Drug Research Center
- School of Medicine
- Shanghai University
- Shanghai 200444
| | - Bin Xu
- Department of Chemistry
- Innovative Drug Research Center
- School of Medicine
- Shanghai University
- Shanghai 200444
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11
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Xu YW, Wang J, Wang G, Zhen L. Diethyl Azodicarboxylate-Promoted Oxidative [3 + 2] Cycloaddition for the Synthesis of Pyrrolo[2,1-a]isoquinolines. J Org Chem 2020; 86:91-102. [DOI: 10.1021/acs.joc.0c01567] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Ya-Wen Xu
- Key Laboratory of Drug Metabolism and Pharmacokinetics, China Pharmaceutical University, 24 Tongjia Xiang, Nanjing 210009, Jiangsu, China
| | - Jiankun Wang
- Key Laboratory of Drug Metabolism and Pharmacokinetics, China Pharmaceutical University, 24 Tongjia Xiang, Nanjing 210009, Jiangsu, China
| | - Guangji Wang
- Key Laboratory of Drug Metabolism and Pharmacokinetics, China Pharmaceutical University, 24 Tongjia Xiang, Nanjing 210009, Jiangsu, China
| | - Le Zhen
- Key Laboratory of Drug Metabolism and Pharmacokinetics, China Pharmaceutical University, 24 Tongjia Xiang, Nanjing 210009, Jiangsu, China
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12
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Ding MW, Sun M, Zhao L, Yu YL. DEAD-Mediated Oxidative Ugi/Aza-Wittig Reaction for the Synthesis of 5-(1,2,3,4-Tetrahydroisoquinolin-1-yl)-1,3,4-oxadiazoles Starting from (N-Isocyanimine)triphenylphosphorane. SYNTHESIS-STUTTGART 2020. [DOI: 10.1055/s-0040-1705967] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
AbstractA one-pot protocol for the synthesis of 5-(1,2,3,4-tetrahydroisoquinolin-1-yl)-1,3,4-oxadiazoles via DEAD-mediated oxidative Ugi/aza-Wittig reaction has been developed. The reaction of (N-isocyanimine)triphenylphosphorane, carboxylic acids, and N-aryl-1,2,3,4-tetrahydroisoquinolines produced polysubstituted 5-(1,2,3,4-tetrahydroisoquinolin-1-yl)-1,3,4-oxadiazoles directly in good yields in the presence of DEAD as an oxidant.
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13
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Nazeri MT, Farhid H, Mohammadian R, Shaabani A. Cyclic Imines in Ugi and Ugi-Type Reactions. ACS COMBINATORIAL SCIENCE 2020; 22:361-400. [PMID: 32574488 DOI: 10.1021/acscombsci.0c00046] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Ugi four-component reactions (U-4CRs) are widely recognized as being highly efficient for the synthesis of pseudopeptides. However, the products of these reactions are not so interesting as drug candidates because they are not conformationally restricted enough for a potent interaction with biological targets. One possible way to overcome this problem is to replace amine and oxo components in the U-4CRs with cyclic imines in so-called Joullié-Ugi three-component reactions (JU-3CRs). This approach provides a robust single-step route to peptide moieties connected to N-heterocyclic motifs that are found as core skeletons in many natural products and pharmaceutical compounds. JU-3CRs also provide much better diastereoselectivity than their four-component analogues. We survey here the redesign of many synthetic routes for the efficient preparation of a wide variety of three-, five-, six-, and seven-membered heterocyclic compounds connected to the peptide backbone. Additionally, in the Ugi reactions based on the cyclic imines, α-acidic isocyanides, or azides can be replaced with normal isocyanides or acids, respectively, leading to the synthesis of N-heterocycles attached to oxazoles or tetrazoles, which are of great pharmaceutical significance. This Review includes all research articles related to Ugi reactions based on the cyclic imines to the year 2020 and will be useful to chemists in designing novel synthetic routes for the synthesis of individual and combinatorial libraries of natural products and drug-like compounds.
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Affiliation(s)
- Mohammad Taghi Nazeri
- Faculty of Chemistry, Shahid Beheshti University, G. C., P.O. Box 19396-4716, 1983963113 Tehran, Iran
| | - Hassan Farhid
- Faculty of Chemistry, Shahid Beheshti University, G. C., P.O. Box 19396-4716, 1983963113 Tehran, Iran
| | - Reza Mohammadian
- Faculty of Chemistry, Shahid Beheshti University, G. C., P.O. Box 19396-4716, 1983963113 Tehran, Iran
| | - Ahmad Shaabani
- Faculty of Chemistry, Shahid Beheshti University, G. C., P.O. Box 19396-4716, 1983963113 Tehran, Iran
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14
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Sun M, Zhao L, Ding MW. One-Pot–Three-Component Synthesis of 2-(1,2,3,4-Tetrahydroisoquinolin-1-yl)oxazoles via DEAD-Promoted Oxidative Ugi/Wittig Reaction. J Org Chem 2019; 84:14313-14319. [DOI: 10.1021/acs.joc.9b02016] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Mei Sun
- Key Laboratory of Pesticide & Chemical Biology of Ministry of Education, Hubei International Scientific and Technological Cooperation Base of Pesticide and Green Synthesis, Central China Normal University, Wuhan 430079, P. R. China
| | - Long Zhao
- Key Laboratory of Pesticide & Chemical Biology of Ministry of Education, Hubei International Scientific and Technological Cooperation Base of Pesticide and Green Synthesis, Central China Normal University, Wuhan 430079, P. R. China
| | - Ming-Wu Ding
- Key Laboratory of Pesticide & Chemical Biology of Ministry of Education, Hubei International Scientific and Technological Cooperation Base of Pesticide and Green Synthesis, Central China Normal University, Wuhan 430079, P. R. China
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15
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Ambule MD, Tripathi S, Ghoshal A, Srivastava AK. IBX-mediated oxidative addition of isocyanides to cyclic secondary amines: total syntheses of alangiobussine and alangiobussinine. Chem Commun (Camb) 2019; 55:10872-10875. [PMID: 31433406 DOI: 10.1039/c9cc05215a] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
The present study describes a robust and general method for the synthesis of C(1)-carboxamides through IBX-mediated oxidative addition of isocyanides to tryptolines and 1,2,3,4-tetrahydroisoquinolines. In this transformation, IBX plays a dual role of an oxidant and Lewis acid to activate imine facilitating isocyanide addition. Detailed mechanistic investigations were performed by isotopic labeling and real-time NMR experiments. The method was utilized for the gram scale syntheses of two alkaloids alangiobussine and alangiobussinine in 63% and 45% overall yield, respectively.
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Affiliation(s)
- Mayur D Ambule
- Division of Medicinal and Process Chemistry, CSIR-Central Drug Research Institute, Sector-10, Jankipuram Extension, Lucknow-226031, India.
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