1
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Singh Y, Choudhury CK, Ghosh R, Singh RS. Computational investigation of the effects of polymer grafting on the effective interaction between silica nanoparticles in water. SOFT MATTER 2024; 20:7122-7132. [PMID: 39193982 DOI: 10.1039/d4sm00512k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/29/2024]
Abstract
Understanding and control of the effective interaction between nanoscale building blocks (colloids or nanoparticles) dispersed in a solvent is an important prerequisite for the development of bottom-up design strategies for soft functional materials. Here, we have employed all-atom molecular dynamics simulations to investigate the impact of polymer grafting on the solvent-mediated effective interaction between the silica nanoparticles (Si-NPs) in water, and in turn, on its bulk structural and thermodynamic properties. We found that the nature of the short grafting polymers [characterized by their interaction with water (hydrophobicity or hydrophilicity) and molecular weight] has a profound effect on the range and strength of the effective interaction between the Si-NPs. The hydrophobic polymer [such as polyethylene (PE)]-grafting of Si-NP gives rise to a more attractive interaction between the Si-NPs compared to the hydrophilic polymer [such as polyethylene glycol (PEG)] and non-grafted cases. This study further provides fundamental insights into the molecular origin of the observed behavior of the effective pair interactions between the grafted Si-NPs. For PE-grafted Si-NPs, the confined water (water inside the cavity formed by a pair of Si-NPs) undergoes a partial dewetting transition on approaching below a critical inter-particle separation leading to a stronger attractive interaction. Furthermore, we report that the effective attraction between the PE-grafted Si-NPs can be reliably controlled by changing the grafting PE density. We have also investigated the bulk structural and thermodynamic behavior of the coarse-grained Si-NP system where the particles interact via effective interaction in the absence of water. We believe that the insights gained from this work are important prerequisites for formulating rational bottom-up design strategies for functional materials where nano- (or, colloidal) particles are the building blocks.
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Affiliation(s)
- Yuvraj Singh
- Department of Physics, Indian Institute of Science Education and Research (IISER) Tirupati, Tirupati, Andhra Pradesh 517619, India
| | | | - Rikhia Ghosh
- Department of Pharmacological Sciences, Icahn School of Medicine, Mount Sinai, New York 10029, USA
| | - Rakesh S Singh
- Department of Chemistry, Indian Institute of Science Education and Research (IISER) Tirupati, Tirupati, Andhra Pradesh 517619, India.
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2
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Zhu G, Gao L, Wang Y, Tlusty T, Yan LT. Programmable Potentials Choreograph Defects in a Colloidal Crystal Shell. PHYSICAL REVIEW LETTERS 2024; 132:048201. [PMID: 38335345 DOI: 10.1103/physrevlett.132.048201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Revised: 11/06/2023] [Accepted: 12/19/2023] [Indexed: 02/12/2024]
Abstract
Crystallization on spherical surfaces is obliged by topology to induce lattice defects. But controlling the organization of such defects remains a great challenge due to the long-range constraints of the curved geometry. Here, we report on DNA-coated colloids whose programmable interaction potentials can be used to regulate the arrangement of defects and even achieve perfect icosahedral order on a sphere. Combined simulations and theoretical analysis show how the potential can be tuned by changing the temperature, thereby controlling the number of defects. An explicit expression for the effective potential is derived, allowing us to distinguish the effects of entropic repulsion and enthalpic attraction. Altogether, the present findings provide insights into the physics of crystallization on curved spaces and may be used for designing desired crystal geometries.
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Affiliation(s)
- Guolong Zhu
- School of Physics and Electronics, Hunan University, Changsha 410082, China
- State Key Laboratory of Chemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
- Center for Soft and Living Matter, Institute for Basic Science (IBS), Ulsan 44919, South Korea
| | - Lijuan Gao
- State Key Laboratory of Chemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Yuming Wang
- State Key Laboratory of Chemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
| | - Tsvi Tlusty
- Center for Soft and Living Matter, Institute for Basic Science (IBS), Ulsan 44919, South Korea
- Departments of Physics and Chemistry, Ulsan National Institute of Science and Technology, Ulsan 44919, South Korea
| | - Li-Tang Yan
- State Key Laboratory of Chemical Engineering, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China
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3
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Rovigatti L, Sciortino F. Designing Enhanced Entropy Binding in Single-Chain Nanoparticles. PHYSICAL REVIEW LETTERS 2022; 129:047801. [PMID: 35939033 DOI: 10.1103/physrevlett.129.047801] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2022] [Revised: 06/24/2022] [Accepted: 07/01/2022] [Indexed: 06/15/2023]
Abstract
Single-chain nanoparticles (SCNPs) are a new class of bio- and soft-matter polymeric objects in which a fraction of the monomers are able to form equivalently intra- or interpolymer bonds. Here we numerically show that a fully entropic gas-liquid phase separation can take place in SCNP systems. Control over the discontinuous (first-order) change-from a phase of independent diluted (fully-bonded) polymers to a phase in which polymers entropically bind to each other to form a (fully-bonded) polymer network-can be achieved by a judicious design of the patterns of reactive monomers along the polymer chain. Such a sensitivity arises from a delicate balance between the distinct entropic contributions controlling the binding.
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Affiliation(s)
- Lorenzo Rovigatti
- Department of Physics, Sapienza Università di Roma, Piazzale A. Moro 2, IT-00185 Roma, Italy and CNR-ISC Uos Sapienza, Piazzale A. Moro 2, IT-00185 Roma, Italy
| | - Francesco Sciortino
- Department of Physics, Sapienza Università di Roma, Piazzale A. Moro 2, IT-00185 Roma, Italy
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4
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Appeldorn JH, Lemcke S, Speck T, Nikoubashman A. Employing Artificial Neural Networks to Identify Reaction Coordinates and Pathways for Self-Assembly. J Phys Chem B 2022; 126:5007-5016. [DOI: 10.1021/acs.jpcb.2c02232] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Jörn H. Appeldorn
- Institute of Physics, Johannes Gutenberg-University Mainz, Staudingerweg 7-9, 55128 Mainz, Germany
| | - Simon Lemcke
- Institute of Physics, Johannes Gutenberg-University Mainz, Staudingerweg 7-9, 55128 Mainz, Germany
| | - Thomas Speck
- Institute of Physics, Johannes Gutenberg-University Mainz, Staudingerweg 7-9, 55128 Mainz, Germany
| | - Arash Nikoubashman
- Institute of Physics, Johannes Gutenberg-University Mainz, Staudingerweg 7-9, 55128 Mainz, Germany
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5
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Wei X, Chen C, Zhao Y, Harazinska E, Bathe M, Hernandez R. Molecular Structure of Single-Stranded DNA on the ZnS Surface of Quantum Dots. ACS NANO 2022; 16:6666-6675. [PMID: 35405067 PMCID: PMC9048700 DOI: 10.1021/acsnano.2c01178] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Accepted: 04/06/2022] [Indexed: 06/14/2023]
Abstract
DNA-based nanoparticle assemblies have emerged as leading candidates in the development of bioimaging materials, photonic devices, and computing materials. Here, we combine atomistic simulations and experiments to characterize the wrapping mechanism of chimeric single-stranded DNA (ssDNA) on CdSe-ZnS (core-shell) quantum dots (QDs) at different ratios of the phosphorothioate (PS) modification of the bases. We use an implicit solvent, all-atom ssDNA model to match the experimentally calculated ssDNA conformation at low salt concentrations. Through simulation, we find that 3-mercaptopropionic acid (MPA) induces electrostatic repulsion and O-(2-mercaptoethyl)-Ó-methyl-hexa (ethylene glycol) (mPEG) induces steric exclusion, and both reduce the binding affinity of ssDNA. In both simulation and experiment, we find that ssDNA is closer to the QD surface when the QD size is larger. The effect of the PS-base ratio on the conformation of ssDNA is also elaborated in this work. We found through MD simulations, and confirmed by transmission electron microscopy, that the maximum valence numbers are 1, 2, and 3 on QDs of 6, 9, and 14 nm in diameter, respectively. We conclude that the maximum ssDNA valence number is linearly related to the QD size, n ∝ R, and justify this finding through an electrostatic repulsion mechanism.
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Affiliation(s)
- Xingfei Wei
- Department
of Chemistry, Chemical & Biomolecular Engineering and Materials Science
& Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Chi Chen
- Department
of Biological Engineering, Massachusetts
Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Yinong Zhao
- Department
of Chemistry, Chemical & Biomolecular Engineering and Materials Science
& Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Ewa Harazinska
- Department
of Chemistry, Chemical & Biomolecular Engineering and Materials Science
& Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Mark Bathe
- Department
of Biological Engineering, Massachusetts
Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Rigoberto Hernandez
- Department
of Chemistry, Chemical & Biomolecular Engineering and Materials Science
& Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States
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6
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Paciolla M, Likos CN, Moreno AJ. Validity of Effective Potentials in Crowded Solutions of Linear and Ring Polymers with Reversible Bonds. Macromolecules 2022; 55:2659-2674. [PMID: 35444345 PMCID: PMC9011144 DOI: 10.1021/acs.macromol.1c02610] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Revised: 03/03/2022] [Indexed: 11/28/2022]
Abstract
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We perform simulations
to compute the effective potential between
the centers-of-mass of two polymers with reversible bonds. We investigate
the influence of the topology on the potential by employing linear
and ring backbones for the precursor (unbonded) polymer, finding that
it leads to qualitatively different effective potentials. In the linear
and ring cases the potentials can be described by Gaussians and generalized
exponentials, respectively. The interactions are more repulsive for
the ring topology, in analogy with known results in the absence of
bonding. We also investigate the effect of the specific sequence of
the reactive groups along the backbone (periodic or with different
degrees of randomness), establishing that it has a significant impact
on the effective potentials. When the reactive sites of both polymers
are chemically orthogonal so that only intramolecular bonds are possible,
the interactions become more repulsive the closer to periodic the
sequence is. The opposite effect is found if both polymers have the
same types of reactive sites and intermolecular bonds can be formed.
We test the validity of the effective potentials in solution, in a
broad range of concentrations from high dilution to far above the
overlap concentration. For this purpose, we compare simulations of
the effective fluid and test particle route calculations with simulations
of the real all-monomer system. Very good agreement is found for the
reversible linear polymers, indicating that unlike in their nonbonding
counterparts many-body effects are minor even far above the overlap
concentration. The agreement for the reversible rings is less satisfactory,
and at high concentration the real system does not show the clustering
behavior predicted by the effective potential. Results similar to
the former ones are found for the partial self-correlations in ring/linear
mixtures. Finally, we investigate the possibility of creating, at
high concentrations, a gel of two interpenetrated reversible networks.
For this purpose we simulate a 50/50 two-component mixture of reversible
polymers with orthogonal chemistry for the reactive sites, so that
intermolecular bonds are only formed between polymers of the same
component. As predicted by both the theoretical phase diagram and
the simulations of the effective fluid, the two networks in the all-monomer
mixture do not interpenetrate, and phase separation (demixing) is
observed instead.
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Affiliation(s)
- Mariarita Paciolla
- Centro de Física de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain
| | - Christos N. Likos
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090 Vienna, Austria
| | - Angel J. Moreno
- Centro de Física de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, 20018 San Sebastián, Spain
- Donostia International Physics Center, Paseo Manuel de Lardizabal 4, 20018 San Sebastián, Spain
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7
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Larson RG, Van Dyk AK, Chatterjee T, Ginzburg VV. Associative Thickeners for Waterborne Paints: Structure, Characterization, Rheology, and Modeling. Prog Polym Sci 2022. [DOI: 10.1016/j.progpolymsci.2022.101546] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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8
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Peng B, Liu Z, Jiang Y. Aggregation of DNA-Grafted Nanoparticles in Water: The Critical Role of Sequence-Dependent Conformation of DNA Coating. J Phys Chem B 2022; 126:847-857. [DOI: 10.1021/acs.jpcb.1c09450] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Bo Peng
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Kowloon, Hong Kong, China
| | - Zhu Liu
- Department of Chemistry, Washington State University, Pullman, Washington 99164, United States
| | - Yi Jiang
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Kowloon, Hong Kong, China
- State Key Laboratory of Marine Pollution, City University of Hong Kong, Kowloon, Hong Kong, China
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9
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Affiliation(s)
- Jason S. Kahn
- Department of Chemical Engineering Columbia University New York NY 10027 USA
- Center for Functional Nanomaterials Brookhaven National Laboratory Upton NY 11973 USA
| | - Oleg Gang
- Department of Chemical Engineering Columbia University New York NY 10027 USA
- Department of Applied Physics and Applied Mathematics Columbia University New York NY 10027 USA
- Center for Functional Nanomaterials Brookhaven National Laboratory Upton NY 11973 USA
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10
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Formanek M, Rovigatti L, Zaccarelli E, Sciortino F, Moreno AJ. Gel Formation in Reversibly Cross-Linking Polymers. Macromolecules 2021. [DOI: 10.1021/acs.macromol.0c02670] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Maud Formanek
- Centro de Física de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain
- Sainsbury Laboratory, University of Cambridge, 47 Bateman Street, CB2 1LR Cambridge, U.K
| | - Lorenzo Rovigatti
- Dipartimento di Fisica, Università di Roma La Sapienza, Piazzale Aldo Moro 2, IT-00185 Roma, Italy
- CNR-ISC Uos Sapienza, Piazzale Aldo Moro 2, IT-00185 Roma, Italy
| | - Emanuela Zaccarelli
- Dipartimento di Fisica, Università di Roma La Sapienza, Piazzale Aldo Moro 2, IT-00185 Roma, Italy
- CNR-ISC Uos Sapienza, Piazzale Aldo Moro 2, IT-00185 Roma, Italy
| | - Francesco Sciortino
- Dipartimento di Fisica, Università di Roma La Sapienza, Piazzale Aldo Moro 2, IT-00185 Roma, Italy
| | - Angel J. Moreno
- Centro de Física de Materiales (CSIC, UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain
- Donostia International Physics Center (DIPC), Paseo Manuel de Lardizabal 4, E-20018 San Sebastián, Spain
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11
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Kahn JS, Gang O. Designer Nanomaterials through Programmable Assembly. Angew Chem Int Ed Engl 2021; 61:e202105678. [PMID: 34128306 DOI: 10.1002/anie.202105678] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Indexed: 11/08/2022]
Abstract
Nanoparticles have long been recognized for their unique properties, leading to exciting potential applications across optics, electronics, magnetism, and catalysis. These specific functions often require a designed organization of particles, which includes the type of order as well as placement and relative orientation of particles of the same or different kinds. DNA nanotechnology offers the ability to introduce highly addressable bonds, tailor particle interactions, and control the geometry of bindings motifs. Here, we discuss how developments in structural DNA nanotechnology have enabled greater control over 1D, 2D, and 3D particle organizations through programmable assembly. This Review focuses on how the use of DNA binding between nanocomponents and DNA structural motifs has progressively allowed the rational formation of prescribed particle organizations. We offer insight into how DNA-based motifs and elements can be further developed to control particle organizations and how particles and DNA can be integrated into nanoscale building blocks, so-called "material voxels", to realize designer nanomaterials with desired functions.
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Affiliation(s)
- Jason S Kahn
- Department of Chemical Engineering, Columbia University, New York, NY, 10027, USA.,Center for Functional Nanomaterials, Brookhaven National Laboratory, Upton, NY, 11973, USA
| | - Oleg Gang
- Department of Chemical Engineering, Columbia University, New York, NY, 10027, USA.,Department of Applied Physics and Applied Mathematics, Columbia University, New York, NY, 10027, USA.,Center for Functional Nanomaterials, Brookhaven National Laboratory, Upton, NY, 11973, USA
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12
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Sato T, Kobayashi Y, Michioka T, Arai N. Self-assembly of polymer-tethered nanoparticles with uniform and Janus surfaces in nanotubes. SOFT MATTER 2021; 17:4047-4058. [PMID: 33725068 DOI: 10.1039/d1sm00009h] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
In this study, a coarse-grained molecular simulation was performed to investigate the morphologies and phase diagrams of self-assembled polymer-tethered nanoparticles (NPs) confined in nanotubes (NTs). Unlike ordinary NPs, polymer-tethered NPs have two distinct characteristic lengths, which are key factors that determine their self-assembly. Herein, two distinct types of NT walls and three types of polymer-tethered NPs were considered: hydrophilic and hydrophobic walls, and hydrophilic, hydrophobic, and Janus surfaces. First, the qualitative phase diagrams of the axial pressure, Pz, versus the ratio of the NT radius to the NP radius, L, were derived. The results revealed that diverse self-assembled morphologies, which are not formed in non-tethered NPs, were observed in the polymer-tethered NPs. For example, three types of ordered structures with different structural characteristic lengths, depending on Pz, were obtained. In addition, the effect of the chemical nature of the polymer-tethered NP surface on the self-assembled morphology confined in NTs was investigated. Clusters of water molecules were formed, particularly in the hydrophobic polymer-tethered NPs, and these clusters caused the structural distortion of the NP. Moreover, in the polymer-tethered NPs with the Janus amphiphilic surface, the hydrophobic and hydrophilic polymer tethered NPs assembled in the axial direction to form an ordered structure, and a double-helix structure was formed at L = 3.0 in the hydrophobic NT. The results of these simulations indicate that the self-assembly behaviours of polymer-tethered NPs can be qualitatively predicted based on the chemical nature of the NT walls and the surface design of the polymer-tethered NP.
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Affiliation(s)
- Takumi Sato
- Department of Mechanical Engineering, Keio University, Kohoku-ku, Yokohama, Japan.
| | - Yusei Kobayashi
- Department of Mechanical Engineering, Keio University, Kohoku-ku, Yokohama, Japan.
| | - Takenobu Michioka
- Department of Mechanical Engineering, Kindai University, Higashi-Osaka, Osaka, Japan
| | - Noriyoshi Arai
- Department of Mechanical Engineering, Keio University, Kohoku-ku, Yokohama, Japan.
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13
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Yu AC, Lian H, Kong X, Lopez Hernandez H, Qin J, Appel EA. Physical networks from entropy-driven non-covalent interactions. Nat Commun 2021; 12:746. [PMID: 33531475 PMCID: PMC7854746 DOI: 10.1038/s41467-021-21024-7] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Accepted: 01/08/2021] [Indexed: 12/22/2022] Open
Abstract
Physical networks typically employ enthalpy-dominated crosslinking interactions that become more dynamic at elevated temperatures, leading to network softening. Moreover, standard mathematical frameworks such as time-temperature superposition assume network softening and faster dynamics at elevated temperatures. Yet, deriving a mathematical framework connecting the crosslinking thermodynamics to the temperature-dependent viscoelasticity of physical networks suggests the possibility for entropy-driven crosslinking interactions to provide alternative temperature dependencies. This framework illustrates that temperature negligibly affects crosslink density in reported systems, but drastically influences crosslink dynamics. While the dissociation rate of enthalpy-driven crosslinks is accelerated at elevated temperatures, the dissociation rate of entropy-driven crosslinks is negligibly affected or even slowed under these conditions. Here we report an entropy-driven physical network based on polymer-nanoparticle interactions that exhibits mechanical properties that are invariant with temperature. These studies provide a foundation for designing and characterizing entropy-driven physical crosslinking motifs and demonstrate how these physical networks access thermal properties that are not observed in current physical networks.
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Affiliation(s)
- Anthony C Yu
- Department of Materials Science & Engineering, Stanford University, Stanford, CA, USA
| | - Huada Lian
- Department of Materials Science & Engineering, Stanford University, Stanford, CA, USA
- Department of Chemical Engineering, Stanford University, Stanford, CA, USA
| | - Xian Kong
- Department of Chemical Engineering, Stanford University, Stanford, CA, USA
| | | | - Jian Qin
- Department of Chemical Engineering, Stanford University, Stanford, CA, USA
| | - Eric A Appel
- Department of Materials Science & Engineering, Stanford University, Stanford, CA, USA.
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14
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He Z, Yin H, Chang CC, Wang G, Liang X. Interfacing DNA with Gold Nanoparticles for Heavy Metal Detection. BIOSENSORS 2020; 10:E167. [PMID: 33172098 PMCID: PMC7694790 DOI: 10.3390/bios10110167] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/09/2020] [Revised: 11/02/2020] [Accepted: 11/04/2020] [Indexed: 12/12/2022]
Abstract
The contamination of heavy metals (e.g., Hg, Pb, Cd and As) poses great risks to the environment and human health. Rapid and simple detection of heavy metals of considerable toxicity in low concentration levels is an important task in biological and environmental analysis. Among the many convenient detection methods for heavy metals, DNA-inspired gold nanoparticles (DNA-AuNPs) have become a well-established approach, in which assembly/disassembly of AuNPs is used for colorimetric signaling of the recognition event between DNA and target heavy metals at the AuNP interface. This review focuses on the recent efforts of employing DNA to manipulate the interfacial properties of AuNPs, as well as the major advances in the colorimetric detection of heavy metals. Beginning with the introduction of the fundamental aspects of DNA and AuNPs, three main strategies of constructing DNA-AuNPs with DNA binding-responsive interface are discussed, namely, crosslinking, electrostatic interaction and base pair stacking. Then, recent achievements in colorimetric biosensing of heavy metals based on manipulation of the interface of DNA-AuNPs are surveyed and compared. Finally, perspectives on challenges and opportunities for future research in this field are provided.
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Affiliation(s)
- Zhiyu He
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, China; (Z.H.); (H.Y.); (X.L.)
| | - Huiling Yin
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, China; (Z.H.); (H.Y.); (X.L.)
| | - Chia-Chen Chang
- Department of Medical Biotechnology and Laboratory Sciences, College of Medicine, Chang Gung University, Taoyuan 33302, Taiwan;
- Kidney Research Center, Department of Nephrology, Chang Gung Memorial Hospital, Taoyuan 33302, Taiwan
| | - Guoqing Wang
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, China; (Z.H.); (H.Y.); (X.L.)
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266237, China
| | - Xingguo Liang
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, China; (Z.H.); (H.Y.); (X.L.)
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266237, China
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15
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Lanfranco R, Jana PK, Bruylants G, Cicuta P, Mognetti BM, Di Michele L. Adaptable DNA interactions regulate surface triggered self assembly. NANOSCALE 2020; 12:18616-18620. [PMID: 32970063 DOI: 10.1039/d0nr04461j] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
DNA-mediated multivalent interactions between colloidal particles have been extensively applied for their ability to program bulk phase behaviour and dynamic processes. Exploiting the competition between different types of DNA-DNA bonds, here we experimentally demonstrate the selective triggering of colloidal self-assembly in the presence of a functionalised surface, which induces changes in particle-particle interactions. Besides its relevance to the manufacturing of layered materials with controlled thickness, the intrinsic signal-amplification features of the proposed interaction scheme make it valuable for biosensing applications.
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Affiliation(s)
- Roberta Lanfranco
- Cavendish Laboratory, University of Cambridge, JJ Thomson Avenue, Cambridge, CB3 0HE, UK
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