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Chen A, Zhang B, Bao J. Adaptive evolution of Paecilomyces variotii enhanced the biodetoxification of high-titer inhibitors in pretreated lignocellulosic feedstock. BIORESOURCE TECHNOLOGY 2024; 411:131351. [PMID: 39182793 DOI: 10.1016/j.biortech.2024.131351] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2024] [Revised: 08/07/2024] [Accepted: 08/23/2024] [Indexed: 08/27/2024]
Abstract
High inhibitor concentrations in lignocellulose feedstock negatively affect the degradation rate of biodetoxification strains. This study designed two adaptive laboratory evolutions in solid substrate and liquid medium to boost the biodetoxification capacity of P. variotii to high titers of lignocellulose-derived inhibitors, resulting in two evolved strains AC70 and ZW70. The results showed that the evolutionary adaptation in liquid medium could better boost the acetic acid assimilation compared to that on solid substrate. Transcriptional analysis revealed that the evolved strains exhibited a significant upregulation of adh, acs, ach1, and ackA directly related to the initial steps of acetate and furan aldehydes metabolisms. ZW70 strain can effectively remove the high concentration inhibitors cocktail from the hydrolysates derived from pretreated wheat straw and furfural residues. The biodetoxified hydrolysates by ZW70 were successfully used for cellulose chiral L-lactic acid production with the titers of ∼110 g/L, which were over 20 % higher than that detoxified by parental strain.
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Affiliation(s)
- Agustian Chen
- State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237, China
| | - Bin Zhang
- State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237, China
| | - Jie Bao
- State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, 130 Meilong Road, Shanghai 200237, China.
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Li B, Liu N, Zhao X. Response mechanisms of Saccharomyces cerevisiae to the stress factors present in lignocellulose hydrolysate and strategies for constructing robust strains. BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS 2022; 15:28. [PMID: 35292082 PMCID: PMC8922928 DOI: 10.1186/s13068-022-02127-9] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2021] [Accepted: 03/01/2022] [Indexed: 11/19/2022]
Abstract
Bioconversion of lignocellulosic biomass to biofuels such as bioethanol and high value-added products has attracted great interest in recent decades due to the carbon neutral nature of biomass feedstock. However, there are still many key technical difficulties for the industrial application of biomass bioconversion processes. One of the challenges associated with the microorganism Saccharomyces cerevisiae that is usually used for bioethanol production refers to the inhibition of the yeast by various stress factors. These inhibitive effects seriously restrict the growth and fermentation performance of the strains, resulting in reduced bioethanol production efficiency. Therefore, improving the stress response ability of the strains is of great significance for industrial production of bioethanol. In this article, the response mechanisms of S. cerevisiae to various hydrolysate-derived stress factors including organic acids, furan aldehydes, and phenolic compounds have been reviewed. Organic acids mainly stimulate cells to induce intracellular acidification, furan aldehydes mainly break the intracellular redox balance, and phenolic compounds have a greater effect on membrane homeostasis. These damages lead to inadequate intracellular energy supply and dysregulation of transcription and translation processes, and then activate a series of stress responses. The regulation mechanisms of S. cerevisiae in response to these stress factors are discussed with regard to the cell wall/membrane, energy, amino acids, transcriptional and translational, and redox regulation. The reported key target genes and transcription factors that contribute to the improvement of the strain performance are summarized. Furthermore, the genetic engineering strategies of constructing multilevel defense and eliminating stress effects are discussed in order to provide technical strategies for robust strain construction. It is recommended that robust S. cerevisiae can be constructed with the intervention of metabolic regulation based on the specific stress responses. Rational design with multilevel gene control and intensification of key enzymes can provide good strategies for construction of robust strains.
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Affiliation(s)
- Bo Li
- Key Laboratory of Industrial Biocatalysis, Ministry of Education, Tsinghua University, Beijing, 100084, China.,Institute of Applied Chemistry, Department of Chemical Engineering, Tsinghua University, Beijing, 100084, China
| | - Nan Liu
- Key Laboratory of Industrial Biocatalysis, Ministry of Education, Tsinghua University, Beijing, 100084, China.,Institute of Applied Chemistry, Department of Chemical Engineering, Tsinghua University, Beijing, 100084, China
| | - Xuebing Zhao
- Key Laboratory of Industrial Biocatalysis, Ministry of Education, Tsinghua University, Beijing, 100084, China. .,Institute of Applied Chemistry, Department of Chemical Engineering, Tsinghua University, Beijing, 100084, China.
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Vanmarcke G, Demeke MM, Foulquié-Moreno MR, Thevelein JM. Identification of the major fermentation inhibitors of recombinant 2G yeasts in diverse lignocellulose hydrolysates. BIOTECHNOLOGY FOR BIOFUELS 2021; 14:92. [PMID: 33836811 PMCID: PMC8034183 DOI: 10.1186/s13068-021-01935-9] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/02/2021] [Accepted: 03/20/2021] [Indexed: 05/16/2023]
Abstract
BACKGROUND Presence of inhibitory chemicals in lignocellulose hydrolysates is a major hurdle for production of second-generation bioethanol. Especially cheaper pre-treatment methods that ensure an economical viable production process generate high levels of these inhibitory chemicals. The effect of several of these inhibitors has been extensively studied with non-xylose-fermenting laboratory strains, in synthetic media, and usually as single inhibitors, or with inhibitor concentrations much higher than those found in lignocellulose hydrolysates. However, the relevance of individual inhibitors in inhibitor-rich lignocellulose hydrolysates has remained unclear. RESULTS The relative importance for inhibition of ethanol fermentation by two industrial second-generation yeast strains in five lignocellulose hydrolysates, from bagasse, corn cobs and spruce, has now been investigated by spiking higher concentrations of each compound in a concentration range relevant for industrial hydrolysates. The strongest inhibition was observed with industrially relevant concentrations of furfural causing partial inhibition of both D-glucose and D-xylose consumption. Addition of 3 or 6 g/L furfural strongly reduced the ethanol titer obtained with strain MD4 in all hydrolysates evaluated, in a range of 34 to 51% and of 77 to 86%, respectively. This was followed by 5-hydroxymethylfurfural, acetic acid and formic acid, for which in general, industrially relevant concentrations caused partial inhibition of D-xylose fermentation. On the other hand, spiking with levulinic acid, 4-hydroxybenzaldehyde, 4-hydroxybenzoic acid or vanillin caused little inhibition compared to unspiked hydrolysate. The further evolved MD4 strain generally showed superior performance compared to the previously developed strain GSE16-T18. CONCLUSION The results highlight the importance of individual inhibitor evaluation in a medium containing a genuine mix of inhibitors as well as the ethanol that is produced by the fermentation. They also highlight the potential of increasing yeast inhibitor tolerance for improving industrial process economics.
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Affiliation(s)
- Gert Vanmarcke
- Laboratory of Molecular Cell Biology, Institute of Botany and Microbiology, Department of Biology, KU Leuven, Kasteelpark Arenberg 31, 3001, Leuven-Heverlee, Flanders, Belgium
- Center for Microbiology, VIB, Kasteelpark Arenberg 31, 3001, Leuven-Heverlee, Flanders, Belgium
| | - Mekonnen M Demeke
- Laboratory of Molecular Cell Biology, Institute of Botany and Microbiology, Department of Biology, KU Leuven, Kasteelpark Arenberg 31, 3001, Leuven-Heverlee, Flanders, Belgium
- Center for Microbiology, VIB, Kasteelpark Arenberg 31, 3001, Leuven-Heverlee, Flanders, Belgium
| | - Maria R Foulquié-Moreno
- Laboratory of Molecular Cell Biology, Institute of Botany and Microbiology, Department of Biology, KU Leuven, Kasteelpark Arenberg 31, 3001, Leuven-Heverlee, Flanders, Belgium
- Center for Microbiology, VIB, Kasteelpark Arenberg 31, 3001, Leuven-Heverlee, Flanders, Belgium
| | - Johan M Thevelein
- Laboratory of Molecular Cell Biology, Institute of Botany and Microbiology, Department of Biology, KU Leuven, Kasteelpark Arenberg 31, 3001, Leuven-Heverlee, Flanders, Belgium.
- Center for Microbiology, VIB, Kasteelpark Arenberg 31, 3001, Leuven-Heverlee, Flanders, Belgium.
- NovelYeast bv, Open Bio-Incubator, Erasmus High School, Laarbeeklaan 121, Jette, 1090, Brussels, Belgium.
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Tallarico S, Bonacci S, Mancuso S, Costanzo P, Oliverio M, Procopio A. Quali-quantitative monitoring of chemocatalytic cellulose conversion into lactic acid by FT-NIR spectroscopy. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021; 250:119367. [PMID: 33401184 DOI: 10.1016/j.saa.2020.119367] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2020] [Revised: 12/15/2020] [Accepted: 12/18/2020] [Indexed: 06/12/2023]
Abstract
Chemocatalytic conversion of cellulose into lactic acid is a valuable alternative to simple sugar fermentation. Nevertheless, the procedures still need optimization to be translated to the industrial scale. Such translation would benefit by on-line monitoring of reaction parameters by fast, inexpensive, direct spectroscopic techniques. In this work, we propose the application of FT-NIR spectroscopy as a suitable analytical tool for monitoring the chemocatalytic conversion of cellulose into lactic acid. Comparison between different FT-NIR spectra at different reaction temperatures and times was exploited to qualitatively indicate the feasibility of the reaction. Besides, an FT-NIR prediction model was proposed for rapidly estimating the molar distribution of cellulose catalytic degradation components in the reaction mixtures. The calibration model was based on reference samples analysed by HPLC. The model was validated by an external validation set. Relevant statistical values of Ratio Performance to Deviations (RPD) referred to both calibration and external validation were obtained, thus demonstrating the potential of such analytical technique in process monitoring.
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Affiliation(s)
- Sofia Tallarico
- Dipartimento di Scienze della Salute, Università Magna Græcia di Catanzaro, Viele Europa - Campus Universitario S. Venuta - Loc, Germaneto, 88100 CZ, Italy
| | - Sonia Bonacci
- Dipartimento di Scienze della Salute, Università Magna Græcia di Catanzaro, Viele Europa - Campus Universitario S. Venuta - Loc, Germaneto, 88100 CZ, Italy
| | - Stefano Mancuso
- Dipartimento di Scienze della Salute, Università Magna Græcia di Catanzaro, Viele Europa - Campus Universitario S. Venuta - Loc, Germaneto, 88100 CZ, Italy
| | - Paola Costanzo
- Dipartimento di Scienze della Salute, Università Magna Græcia di Catanzaro, Viele Europa - Campus Universitario S. Venuta - Loc, Germaneto, 88100 CZ, Italy
| | - Manuela Oliverio
- Dipartimento di Scienze della Salute, Università Magna Græcia di Catanzaro, Viele Europa - Campus Universitario S. Venuta - Loc, Germaneto, 88100 CZ, Italy.
| | - Antonio Procopio
- Dipartimento di Scienze della Salute, Università Magna Græcia di Catanzaro, Viele Europa - Campus Universitario S. Venuta - Loc, Germaneto, 88100 CZ, Italy
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Rapid Biochemical Methane Potential Evaluation of Anaerobic Co-Digestion Feedstocks Based on Near Infrared Spectroscopy and Chemometrics. ENERGIES 2021. [DOI: 10.3390/en14051460] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Biochemical methane potential (BMP) of anaerobic co-digestion (co-AD) feedstocks is an essential basis for optimizing ratios of materials. Given the time-consuming shortage of conventional BMP tests, a rapid estimated method was proposed for BMP of co-AD—with straw and feces as feedstocks—based on near infrared spectroscopy (NIRS) combined with chemometrics. Partial least squares with several variable selection algorithms were used for establishing calibration models. Variable selection methods were constructed by the genetic simulated annealing algorithm (GSA) combined with interval partial least squares (iPLS), synergy iPLS, backward iPLS, and competitive adaptive reweighted sampling (CARS), respectively. By comparing the modeling performances of characteristic wavelengths selected by different algorithms, it was found that the model constructed using 57 characteristic wavelengths selected by CARS-GSA had the best prediction accuracy. For the validation set, the determination coefficient, root mean square error and relative root mean square error of the CARS-GSA model were 0.984, 6.293 and 2.600, respectively. The result shows that the NIRS regression model—constructed with characteristic wavelengths, selected by CARS-GSA—can meet actual detection requirements. Based on a large number of samples collected, the method proposed in this study can realize the rapid and accurate determination of the BMP for co-AD raw materials in biogas engineering.
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Li J, Huang H, Zhang M, Wang D. Co-fermentation of magnesium oxide-treated corn stover and corn stover liquor for cellulosic ethanol production and techno-economic analysis. BIORESOURCE TECHNOLOGY 2019; 294:122143. [PMID: 31563114 DOI: 10.1016/j.biortech.2019.122143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2019] [Revised: 09/06/2019] [Accepted: 09/07/2019] [Indexed: 06/10/2023]
Abstract
MgO is an effective catalyst to reduce the recalcitrant structure of corn stover and reduce sugar degradation during pretreatment. To evaluate the economic feasibility of MgO pretreatment, techno-economic analysis was performed at a commercial scale of 700,000 MT stover per year based on the collected experimental data. Compared to LHW pretreatment, MgO pretreatment reduced total capital investment due to elimination of solids washing and increased ethanol yield by 78.4 L/MT stover due to higher xylose yield (53.4 vs 10.9%), thus resulted in a lower minimum ethanol selling price (MESP) of $0.72/liter. Although washing of MgO-pretreated solids improved glucose (73.0 vs 69.5%) and xylose (66.0 vs 53.4%) yields, MESP did not decrease but increase by $0.08/liter due to the high capital cost of solid-liquid separation unit. Tween 80 also improved glucose (73.1 vs 69.5%) and xylose (62.6 vs 53.5%) yields. However, its high cost limited its economic feasibility in ethanol production.
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Affiliation(s)
- Jun Li
- Department of Biological and Agricultural Engineering, Kansas State University, Manhattan, KS 66506, United States
| | - Haibo Huang
- Department of Food Science and Technology, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, United States.
| | - Meng Zhang
- Department of Industrial and Manufacturing Systems Engineering, Kansas State University, Manhattan, KS 66506, United States
| | - Donghai Wang
- Department of Biological and Agricultural Engineering, Kansas State University, Manhattan, KS 66506, United States.
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Li J, Zhang M, Wang D. Enhancing delignification and subsequent enzymatic hydrolysis of corn stover by magnesium oxide-ethanol pretreatment. BIORESOURCE TECHNOLOGY 2019; 279:124-131. [PMID: 30716604 DOI: 10.1016/j.biortech.2019.01.123] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2018] [Revised: 01/24/2019] [Accepted: 01/25/2019] [Indexed: 05/14/2023]
Abstract
Corn stover pretreatment by MgO-ethanol was investigated to improve sugar recovery by reducing sugar degradation and enhance enzymatic hydrolysis by improving delignification and reducing inhibitor formation. Results showed MgO as an effective additive and Lewis base, functioned to neutralize the acids released from hemicellulose during pretreatment, reduce monosaccharide degradation and inhibitor formation, and enhance delignification. The optimal pretreatment conditions were 50% ethanol, 0.08 mol/L MgO, and 10% solid loading at 190 °C for 40 min. Under optimal conditions, 98% glucose and 92% xylose were recovered with 89% glucan and 71% xylan recoveries and 60% lignin removal. A total sugar yield of 63% on a received biomass basis after enzymatic hydrolysis was obtained with 78% glucose and 41% xylose yields. The resulting biomass slurry was near-neutral and free of furfural and 5-hydroxymethylfurfural. Thus, the process to isolate high-purity value-added lignin and recover sugars from biomass liquor can be largely simplified.
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Affiliation(s)
- Jun Li
- Department of Biological and Agricultural Engineering, Kansas State University, Manhattan, KS 66506, United States
| | - Meng Zhang
- Department of Industrial and Manufacturing Systems Engineering, Kansas State University, Manhattan, KS 66506, United States
| | - Donghai Wang
- Department of Biological and Agricultural Engineering, Kansas State University, Manhattan, KS 66506, United States.
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