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Merski I, Yin J, VanderLinden RT, Rainier JD. The Role of N-Substitution in Regio- and Stereoselective Vinylogous Imidonaphthoquinone (VINAquinone) [2 + 2] Photocycloadditions. Org Lett 2024; 26:4921-4925. [PMID: 38814707 DOI: 10.1021/acs.orglett.4c01418] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/01/2024]
Abstract
Described in this manuscript are intramolecular [2 + 2] photocycloadditions of readily available vinylogous imidonaphthoquinones whose regio- and diastereoselectivity is dependent on the substitution on the vinylogous imide. When exposed to 419 nm light, 2° vinylogous imidonaphthoquinones give novel bridged tetracyclic aza-anthraquinones from a rare crossed [2 + 2] cycloaddition reaction. In contrast, exposure of the corresponding 3° substrates to white light leads to linear adducts. Also outlined here are auxiliary controlled diastereoselective reactions and cyclobutane fragmentations as a means of generating the spirofused γ-lactam moiety present in the ansalactam family of natural product.
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Affiliation(s)
- Ian Merski
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84108, United States
| | - Jinya Yin
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84108, United States
| | - Ryan T VanderLinden
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84108, United States
| | - Jon D Rainier
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84108, United States
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2
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Zhu F, Li Z, Wu XF. Nickel-Catalyzed Aminofluoroalkylative Cyclization of Styrenes with Ethyl Fluoroacetate and Anilines toward Fluoro-γ-Lactams. Org Lett 2023; 25:8535-8539. [PMID: 37985463 DOI: 10.1021/acs.orglett.3c03589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2023]
Abstract
A novel method for the nickel-catalyzed multicomponent aminofluoroalkylation/cyclization of styrenes with ethyl fluoroacetate and anilines has been developed. This protocol provides general and efficient access to a diverse range of fluoro-γ-lactams from simple and readily available starting materials. Control experiments prove the involvement of radical intermediates and excluded the presence of 2-fluoro-N-phenylacetamide.
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Affiliation(s)
- Fengxiang Zhu
- School of Chemistry and Chemical Engineering, Shanxi University, Taiyuan 030006, China
| | - Ziyan Li
- School of Chemistry and Chemical Engineering, Shanxi University, Taiyuan 030006, China
| | - Xiao-Feng Wu
- Institution Dalian National Laboratory for Clean Energy, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- Leibniz-Institut für Katalyse e.V., Rostock 18059, Germany
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3
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Ibrahim AH, Attia EZ, Hofny HA, Alsenani F, Zayed A, Rateb ME, Abdelmohsen UR, Desoukey SY, Fouad MA, Kamel MS. Metabolic profiling and biological potential of the marine sponge associated Nocardiopsis sp. UR67 along with docking studies. Nat Prod Res 2023; 37:3531-3537. [PMID: 35666810 DOI: 10.1080/14786419.2022.2084396] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Revised: 05/07/2022] [Accepted: 05/24/2022] [Indexed: 10/18/2022]
Abstract
This work was performed to dig into the phytochemical composition and bioactivities of Nocardiopsis sp. UR67 associated with the marine sponge Callyspongia sp. It was fermented in suspension and immobilised in calcium alginate bead cultures. The ethyl acetate extracts, afforded from the broth in each case named EG-49 and J-48g, respectively, revealed 16 chemical principles mostly belonging to polyketides, macrolides, and peptides. EG-49 and J-48g displayed anti-Candida albicans activity with IC50 values of 8.1 and 8.3 µg/mL, and a substantial cytotoxic effect against lung adenocarcinoma H1650 at IC50 12.6 and 13.7 µg/mL, respectively. However, only EG-49 exhibited a noteworthy anti-trypanosomal activity at 7.5 µg/mL. Molecular docking of the characterised compounds against Trypanosoma brucei trypanothione reductase demonstrated the highest binding models of griseochelin-methyl ester (9) and filipin-II (11), which drew considerable significance of the metabolites derived from Nocardiopsis sp. UR67 developing potential T. brucei trypanothione reductase inhibitors.
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Affiliation(s)
- Alyaa Hatem Ibrahim
- Department of Pharmacognosy, Faculty of Pharmacy, Sohag University, Sohag, Egypt
| | - Eman Zekry Attia
- Department of Pharmacognosy, Faculty of Pharmacy, Minia University, Minia, Egypt
| | - Heba A Hofny
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Sohag University, Sohag, Egypt
| | - Faisal Alsenani
- Department of Pharmacognosy, College of Pharmacy, Umm Al-Qura University, Makkah, Saudi Arabia
| | - Ahmed Zayed
- Department of Pharmacognosy, College of Pharmacy, Tanta University, Tanta, Egypt
- Institute of Bioprocess Engineering, Technical University of Kaiserslautern, Kaiserslautern, Germany
| | - Mostafa E Rateb
- School of Computing, Engineering & Physical Sciences, University of the West of Scotland, Paisley, UK
| | - Usama Ramadan Abdelmohsen
- Department of Pharmacognosy, Faculty of Pharmacy, Minia University, Minia, Egypt
- Department of Pharmacognosy, Faculty of Pharmacy, Deraya University, New Minia City, Egypt
| | - Samar Yehia Desoukey
- Department of Pharmacognosy, Faculty of Pharmacy, Minia University, Minia, Egypt
| | - Mostafa Ahmed Fouad
- Department of Pharmacognosy, Faculty of Pharmacy, Minia University, Minia, Egypt
| | - Mohamed Salah Kamel
- Department of Pharmacognosy, Faculty of Pharmacy, Minia University, Minia, Egypt
- Department of Pharmacognosy, Faculty of Pharmacy, Deraya University, New Minia City, Egypt
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4
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Ye F, Zhao X, Shi Y, Hu Y, Ding Y, Lu C, Li Y, Wang H, Lu G, Shen Y. Deciphering the Timing of Naphthalenic Ring Formation in the Biosynthesis of 8-Deoxyrifamycins. Org Lett 2023; 25:6474-6478. [PMID: 37634191 DOI: 10.1021/acs.orglett.3c02039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/29/2023]
Abstract
Although the biosynthesis of rifamycin has been studied for three decades, the biosynthetic formation of the naphthalenic ring remains unclear. In this study, by deletion of all post-PKS modification genes, we identified macrolactam precursors released from rif PKS. Isolated prorifamycins (M3 and M4) have a benzenic chromophore and exist in two sets of macrocyclic atropisomers. The transformation from prorifamycins to benzenoid (5) and naphthalenoid (6) was suggested to be a non-enzymatic process, which is an off-PKS assembly.
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Affiliation(s)
- Feng Ye
- Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical Sciences, Cheeloo College of Medicine, Shandong University, Jinan, Shandong 250012, China
| | - Xia Zhao
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, Shandong 250100, China
| | - Yanrong Shi
- Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical Sciences, Cheeloo College of Medicine, Shandong University, Jinan, Shandong 250012, China
| | - Yanlei Hu
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, Shandong 250100, China
| | - Yanjiao Ding
- Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical Sciences, Cheeloo College of Medicine, Shandong University, Jinan, Shandong 250012, China
| | - Chunhua Lu
- Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical Sciences, Cheeloo College of Medicine, Shandong University, Jinan, Shandong 250012, China
| | - Yaoyao Li
- Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical Sciences, Cheeloo College of Medicine, Shandong University, Jinan, Shandong 250012, China
| | - Haoxin Wang
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China
| | - Gang Lu
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, Shandong 250100, China
| | - Yuemao Shen
- Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical Sciences, Cheeloo College of Medicine, Shandong University, Jinan, Shandong 250012, China
- State Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong 266237, China
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5
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Liu L, Liu Y, Wu Q, Zhao X, Li Y, Chen G, Bi S. Mechanistic Investigation into the Regio-Controllable Hydroallylations of Alkynes with Allylborons under Pd-Based Synergetic Catalyses. J Org Chem 2023; 88:4536-4545. [PMID: 36930045 DOI: 10.1021/acs.joc.3c00004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/18/2023]
Abstract
Density functional theory calculations were employed to investigate the Pd-catalyzed regio-selective hydroallylations of alkynes with allylborons: cooperation of Cu(OAc)2 and dppe resulting in 1,4-dienes while combination of AdCO2H and PCy3 leading to 1,5-dienes. A unified rationalization mechanism called "Lewis-acid-base-interaction promoted deprotonation/3,3-rearrangement" was proposed. Compared with the commonly reported metathesis pathway to only afford the metal-allyl intermediate, in the newly established mechanism, an additional Brønsted acid (as an initiator of the Pd0 oxidative addition) is generated by the interaction of the allylboron (Lewis acid) B atom with the nBuOH (Lewis base) O atom, and subsequent 3,3-rearrangement ensures the thermodynamic feasibility of the reaction. In addition, it was found that excess Cu(OAc)2 plays two potential roles in the oxidative addition/alkyne insertion: (i) the participation of one AcO- of Cu(OAc)2 ensures a large orbital overlap between the migrating H and Pd atoms, facilitating the formal AcO-H cleavage and (ii) the extra (OAc)2Cu···O(carboxyl) σ-coordination indirectly contributes to the (Me)C≡C(Ph) insertion into the Pd-H bond. Further analysis showed that the origin of the regioselectivity is closely related to the employed phosphorus ligand. These revealed results, which have been overlooked in the previous documents, would aid the development of new related catalytic reactions.
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Affiliation(s)
- Lingjun Liu
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, P. R. China
| | - Yuxia Liu
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, P. R. China.,Shaanxi Key Laboratory of Chemical Additives for Industry, College of Chemistry and Chemical Engineering, Shaanxi University of Science and Technology, Xi'an 710021, China
| | - Qiao Wu
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, P. R. China
| | - Xufang Zhao
- Shaanxi Key Laboratory of Chemical Additives for Industry, College of Chemistry and Chemical Engineering, Shaanxi University of Science and Technology, Xi'an 710021, China
| | - Yulin Li
- Key Laboratory of Tibetan Medicine Research and Qinghai Key Laboratory of Qinghai-Tibet Plateau Biological Resources, Northwest Institute of Plateau Biology, Chinese Academy of Science, Xining, Qinghai 810001, P. R. China
| | - Guang Chen
- Shaanxi Key Laboratory of Chemical Additives for Industry, College of Chemistry and Chemical Engineering, Shaanxi University of Science and Technology, Xi'an 710021, China.,Key Laboratory of Tibetan Medicine Research and Qinghai Key Laboratory of Qinghai-Tibet Plateau Biological Resources, Northwest Institute of Plateau Biology, Chinese Academy of Science, Xining, Qinghai 810001, P. R. China
| | - Siwei Bi
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, P. R. China
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6
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Kanwal A, Bilal M, Rasool N, Zubair M, Shah SAA, Zakaria ZA. Total Synthesis of Terpenes and Their Biological Significance: A Critical Review. Pharmaceuticals (Basel) 2022; 15:1392. [PMID: 36422521 PMCID: PMC9699253 DOI: 10.3390/ph15111392] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Revised: 10/13/2022] [Accepted: 10/24/2022] [Indexed: 09/10/2024] Open
Abstract
Terpenes are a group of natural products made up of molecules with the formula (C5H8)n that are typically found in plants. They are widely employed in the medicinal, flavor, and fragrance industries. The total synthesis of terpenes as well as their origin and biological potential are discussed in this review.
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Affiliation(s)
- Aqsa Kanwal
- Department of Chemistry, Government College University, Faisalabad 38000, Pakistan
| | - Muhammad Bilal
- School of Chemistry and Chemical Engineering, Shandong University, Jinan 250100, China
| | - Nasir Rasool
- Department of Chemistry, Government College University, Faisalabad 38000, Pakistan
| | - Muhammad Zubair
- Department of Chemistry, Government College University, Faisalabad 38000, Pakistan
| | - Syed Adnan Ali Shah
- Faculty of Pharmacy, Universiti Teknologi MARA Cawangan Selangor Kampus Puncak Alam, Bandar Puncak Alam 42300, Selangor, Malaysia
- Atta-ur-Rahman Institute for Natural Product Discovery (AuRIns), Universiti Teknologi MARA Cawangan Selangor Kampus Puncak Alam, Bandar Puncak Alam 42300, Selangor, Malaysia
| | - Zainul Amiruddin Zakaria
- Borneo Research on Algesia, Inflammation and Neurodegeneration (BRAIN) Group, Faculty of Medicine and Health Sciences, Sabah Universiti Malaysia, Jalan UMS, Kota Kinabalu 88400, Sabah, Malaysia
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7
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M S AKB, Mohan S, K T A, Chandramouli M, Alaganandam K, Ningaiah S, Babu KS, Somappa SB. Marine Based Natural Products: Exploring the Recent Developments in the Identification of Antimicrobial Agents. Chem Biodivers 2022; 19:e202200513. [PMID: 36000304 DOI: 10.1002/cbdv.202200513] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Accepted: 08/23/2022] [Indexed: 11/09/2022]
Abstract
The marine ecosystem is the less explored, biologically diverse, and vastest resource to discover novel antimicrobial agents. In recent decades' antimicrobial drugs are losing their effectiveness due to the growing resistance among pathogens, which causes diseases to have considerable death rates across the globe. Therefore, there is a need for the discovery of new antibacterials that can reach the market. There is a gradual growth of compounds from marine sources which are entering the clinical trials. Thus, the prominence of marine natural products in the field of drug design and discovery across the academia and pharmaceutical industry is gaining attention. Herein, the present review covers nearly 200 marine based antimicrobial agents of 11 structural classes discovered from the year 2010 to 2022. All the discussed compounds have exhibited medium to high antimicrobial activity in inhibiting various microorganisms.
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Affiliation(s)
- Ajay Krishna B M S
- NIIST-CSIR: National Institute for Interdisciplinary Science and Technology CSIR, Chemical Sciences and Technology Division, Sir C V Raman Buiding, Chemical Sciences and Technology Division, 695019, Thiruvanathapuram, INDIA
| | - Sangeetha Mohan
- NIIST-CSIR: National Institute for Interdisciplinary Science and Technology CSIR, Chemical Sciences and Technology Division, Sir C V Raman Buiding, Chemical Sciences and Technology Division, CSIR-NIIST, 695019, Thiruvananthapuram, INDIA
| | - Ashitha K T
- NIIST-CSIR: National Institute for Interdisciplinary Science and Technology CSIR, Chemical Sciences and Technology Division, Sir C V Raman Buiding, Chemical Sciences and Technology Division, 695019, Thiruvananthapuram, INDIA
| | - Manasa Chandramouli
- Visvesvaraya Technological University, School of Chemistry, Visvesvaraya Technological University, 570 002, Mysore, INDIA
| | - Kumaran Alaganandam
- NIIST-CSIR: National Institute for Interdisciplinary Science and Technology CSIR, Chemical Sciences and Technology Division, Sir C V Raman Buiding, Chemical Sciences and Technology Division, TC 51/2151, Lal Lane, Industrial estate po., 695019, Thiruvananthapuram, INDIA
| | - Srikantamurthy Ningaiah
- Visvesvaraya Technological University, School of Chemistry, Vidyavardhaka College of Engineering, CSIR-NIIST, 570 002, Mysore, INDIA
| | - K Suresh Babu
- IICT: Indian Institute of Chemical Technology, Natural Products and Drug Discovery, IICT Campus, Hyderabad, INDIA
| | - Sasidhar B Somappa
- NIIST-CSIR: National Institute for Interdisciplinary Science and Technology CSIR, Organic Chemistry Section, Chemical Sciences and Technology Division, Sir C V Raman Block, Chemical Sciences and Technology Division, Industrial estate po., 695019, Thiruvananthapuram, INDIA
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8
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dos Santos JDN, João SA, Martín J, Vicente F, Reyes F, Lage OM. iChip-Inspired Isolation, Bioactivities and Dereplication of Actinomycetota from Portuguese Beach Sediments. Microorganisms 2022; 10:1471. [PMID: 35889190 PMCID: PMC9319460 DOI: 10.3390/microorganisms10071471] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Revised: 07/13/2022] [Accepted: 07/19/2022] [Indexed: 02/01/2023] Open
Abstract
Oceans hold a stunning number of unique microorganisms, which remain unstudied by culture-dependent methods due to failures in establishing the right conditions for these organisms to grow. In this work, an isolation effort inspired by the iChip was performed using marine sediments from Memoria beach, Portugal. The isolates obtained were identified by 16S rRNA gene analysis, fingerprinted using BOX-PCR and ERIC-PCR, searched for the putative presence of secondary metabolism genes associated with polyketide synthase I (PKS-I) and non-ribosomal peptide synthetases (NRPS), screened for antimicrobial activity against Escherichia coli ATCC 25922 and Staphylococcus aureus ATCC 29213, and had bioactive extracts dereplicated by LC/HRMS. Of the 158 isolated strains, 96 were affiliated with the phylum Actinomycetota, PKS-I and NRPS genes were detected in 53 actinomycetotal strains, and 11 proved to be bioactive (10 against E. coli, 1 against S. aureus and 1 against both pathogens). Further bioactivities were explored using an "one strain many compounds" approach, with six strains showing continued bioactivity and one showing a novel one. Extract dereplication showed the presence of several known bioactive molecules and potential novel ones in the bioactive extracts. These results indicate the use of the bacteria isolated here as sources of new bioactive natural products.
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Affiliation(s)
- José Diogo Neves dos Santos
- Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre S/N, 4169-007 Porto, Portugal; (S.A.J.); (O.M.L.)
- Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, 4450-208 Matosinhos, Portugal
| | - Susana Afonso João
- Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre S/N, 4169-007 Porto, Portugal; (S.A.J.); (O.M.L.)
- Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, 4450-208 Matosinhos, Portugal
| | - Jesús Martín
- Fundación MEDINA, Centro de Excelencia en Investigación de Medicamentos Innovadores en Andalucía, Avenida del Conocimiento, 34 Parque Tecnológico de Ciencias de la Salud, 18016 Granada, Spain; (J.M.); (F.V.); (F.R.)
| | - Francisca Vicente
- Fundación MEDINA, Centro de Excelencia en Investigación de Medicamentos Innovadores en Andalucía, Avenida del Conocimiento, 34 Parque Tecnológico de Ciencias de la Salud, 18016 Granada, Spain; (J.M.); (F.V.); (F.R.)
| | - Fernando Reyes
- Fundación MEDINA, Centro de Excelencia en Investigación de Medicamentos Innovadores en Andalucía, Avenida del Conocimiento, 34 Parque Tecnológico de Ciencias de la Salud, 18016 Granada, Spain; (J.M.); (F.V.); (F.R.)
| | - Olga Maria Lage
- Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre S/N, 4169-007 Porto, Portugal; (S.A.J.); (O.M.L.)
- Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, 4450-208 Matosinhos, Portugal
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Chaves-Pouso A, Álvarez-Constantino AM, Fañanás-Mastral M. Enantio- and Diastereoselective Copper-Catalyzed Allylboration of Alkynes with Allylic gem-Dichlorides. Angew Chem Int Ed Engl 2022; 61:e202117696. [PMID: 35263483 PMCID: PMC9314970 DOI: 10.1002/anie.202117696] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2021] [Indexed: 11/06/2022]
Abstract
Allylic gem-dichlorides are shown to be efficient substrates for catalytic asymmetric allylboration of alkynes. The method employs a chiral NHC-Cu catalyst capable of generating in a single step chiral skipped dienes bearing a Z-alkenyl chloride, a trisubstituted E-alkenyl boronate and a bis-allylic stereocenter with excellent levels of chemo-, regio- enantio- and diastereoselectivity. This high degree of functionalization makes these products versatile building blocks as illustrated with the synthesis of several optically active compounds. DFT calculations support the key presence of a metal cation bridge ligand-substrate interaction and account for the stereoselectivity outcome.
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Affiliation(s)
- Andrea Chaves-Pouso
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Andrés M Álvarez-Constantino
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Martín Fañanás-Mastral
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
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10
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Hu H, Li BS, Xu JL, Sun W, Wang Y, Sun M. Rh(III)-Catalyzed spiroannulation of ketimines with cyclopropenones via sequential C-H/C-C bond activation. Chem Commun (Camb) 2022; 58:4743-4746. [PMID: 35323830 DOI: 10.1039/d2cc00421f] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An unprecedented Rh(III)-catalyzed [3+3]-spiroannulation of ketimines with cyclopropenones to access spiro[4,5]dienones has been developed. Sequential C-H/C-C bond activation and subsequent nucleophilic addition are disclosed in this process. This procedure represents the first example of the construction of spirolactams utilising cyclopropenones as 3C synthons. The remarkable advantages of this protocol are excellent chemo- and regio-selectivity, wide functional group tolerance, high reaction yields, and tolerance towards H2O.
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Affiliation(s)
- Hong Hu
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an 710127, China.
| | - Bin-Shi Li
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an 710127, China.
| | - Jing-Lei Xu
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an 710127, China.
| | - Wei Sun
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an 710127, China.
| | - Yong Wang
- BGI-Shenzhen, Shenzhen 518083, China.
| | - Meng Sun
- Key Laboratory of Synthetic and Natural Functional Molecule of the Ministry of Education, College of Chemistry and Materials Science, Northwest University, Xi'an 710127, China. .,State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian 116024, China
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11
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Chaves‐Pouso A, Álvarez‐Constantino AM, Fañanás‐Mastral M. Enantio‐ and Diastereoselective Copper‐Catalyzed Allylboration of Alkynes with Allylic
gem
‐Dichlorides. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202117696] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Andrea Chaves‐Pouso
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) Departamento de Química Orgánica Universidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Andrés M. Álvarez‐Constantino
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) Departamento de Química Orgánica Universidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Martín Fañanás‐Mastral
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS) Departamento de Química Orgánica Universidade de Santiago de Compostela 15782 Santiago de Compostela Spain
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12
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Skrzypczak N, Przybylski P. Modifications, biological origin and antibacterial activity of naphthalenoid ansamycins. Nat Prod Rep 2022; 39:1653-1677. [PMID: 35244668 DOI: 10.1039/d2np00002d] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Covering: 2011 to 2021Structural division of natural naphthalenoid ansamycins, regarding the type of the core and length of the ansa chain, and their biosynthetic pathways in microorganisms are discussed. The great biosynthetic plasticity of natural naphthalenoid ansamycins is reflected in their structural variety due to the alterations within ansa bridge or naphthalenoid core portions. A comparison between the biological potency of natural and semisynthetic naphthalenoid ansamycins was performed and discussed in relation to the molecular targets in cells. The antibacterial potency of naphthalenoid ansamycins seems to be dependent on the ansa chain length and conformational flexibility - the higher flexibility of the ansa chain the better biological outcome is noted.
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Affiliation(s)
- Natalia Skrzypczak
- Faculty of Chemistry, Adam Mickiewicz University, Uniwersytetu Poznanskiego 8, 61-614 Poznan, Poland.
| | - Piotr Przybylski
- Faculty of Chemistry, Adam Mickiewicz University, Uniwersytetu Poznanskiego 8, 61-614 Poznan, Poland.
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13
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β‐Nitrostyrenes
as a valuable precursor for synthesis of β‐aryl‐γ‐lactam and 2‐oxo‐1,2‐dihydroquinoline derivatives. J Heterocycl Chem 2022. [DOI: 10.1002/jhet.4446] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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14
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Escalante A, Mendoza-Flores R, Gosset G, Bolívar F. The aminoshikimic acid pathway in bacteria as source of precursors for the synthesis of antibacterial and antiviral compounds. J Ind Microbiol Biotechnol 2021; 48:6347350. [PMID: 34374768 PMCID: PMC8788734 DOI: 10.1093/jimb/kuab053] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2021] [Accepted: 08/03/2021] [Indexed: 11/16/2022]
Abstract
The aminoshikimic acid (ASA) pathway comprises a series of reactions resulting in the synthesis of 3-amino-5-hydroxybenzoic acid (AHBA), present in bacteria such as Amycolatopsis mediterranei and Streptomyces. AHBA is the precursor for synthesizing the mC7N units, the characteristic structural component of ansamycins and mitomycins antibiotics, compounds with important antimicrobial and anticancer activities. Furthermore, aminoshikimic acid, another relevant intermediate of the ASA pathway, is an attractive candidate for a precursor for oseltamivir phosphate synthesis, the most potent anti-influenza neuraminidase inhibitor treatment of both seasonal and pandemic influenza. This review discusses the relevance of the key intermediate AHBA as a scaffold molecule to synthesize diverse ansamycins and mitomycins. We describe the structure and control of the expression of the model biosynthetic cluster rif in A. mediterranei to synthesize ansamycins and review several current pharmaceutical applications of these molecules. Additionally, we discuss some relevant strategies developed for overproducing these chemicals, focusing on the relevance of the ASA pathway intermediates kanosamine, AHAB, and ASA.
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Affiliation(s)
- Adelfo Escalante
- Departamento de Ingeniería Celular y Biocatálisis, Instituto de Biotecnología. Universidad Nacional Autónoma de México, Av. Universidad 2001, Colonia Chamilpa, 62210, Cuernavaca, Morelos, México
| | - Rubén Mendoza-Flores
- Departamento de Ingeniería Celular y Biocatálisis, Instituto de Biotecnología. Universidad Nacional Autónoma de México, Av. Universidad 2001, Colonia Chamilpa, 62210, Cuernavaca, Morelos, México
| | - Guillermo Gosset
- Departamento de Ingeniería Celular y Biocatálisis, Instituto de Biotecnología. Universidad Nacional Autónoma de México, Av. Universidad 2001, Colonia Chamilpa, 62210, Cuernavaca, Morelos, México
| | - Francisco Bolívar
- Departamento de Ingeniería Celular y Biocatálisis, Instituto de Biotecnología. Universidad Nacional Autónoma de México, Av. Universidad 2001, Colonia Chamilpa, 62210, Cuernavaca, Morelos, México
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15
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Liang Z, Lin YC, Pierce JG. Stereoselective Synthesis of the Spirocyclic γ-Lactam Core of the Ansalactams. Org Lett 2021; 23:9559-9562. [PMID: 34846908 PMCID: PMC9437948 DOI: 10.1021/acs.orglett.1c03782] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Ansalactam A is an ansa macrolide natural product that contains a densely functionalized spiro-γ-lactam core containing three contiguous stereocenters. This unusual motif distinguishes it from other members of this family and represents a significant synthetic challenge. Herein, we report the development of a stereoselective formal [3+2] cycloaddition reaction for the construction of this key spiro-γ-lactam motif for the first time, thereby enabling access to the northern domain of ansalactam A.
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Affiliation(s)
- Zhanhao Liang
- Department of Chemistry and Comparative Medicine Institute, NC State University, Raleigh, North Carolina, USA
| | - You-Chen Lin
- Department of Chemistry and Comparative Medicine Institute, NC State University, Raleigh, North Carolina, USA
| | - Joshua G. Pierce
- Department of Chemistry and Comparative Medicine Institute, NC State University, Raleigh, North Carolina, USA
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16
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Ryu MJ, Hillman PF, Lee J, Hwang S, Lee EY, Cha SS, Yang I, Oh DC, Nam SJ, Fenical W. Antibacterial Meroterpenoids, Merochlorins G-J from the Marine Bacterium Streptomyces sp. Mar Drugs 2021; 19:md19110618. [PMID: 34822489 PMCID: PMC8624273 DOI: 10.3390/md19110618] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 10/28/2021] [Accepted: 10/28/2021] [Indexed: 11/16/2022] Open
Abstract
Four new chlorinated meroterpenoids, merochlorins G-J (1-4), and 10, a dihydronaphthalenedione precursor, along with known merochlorins A (5) and C-F (6-9), were obtained from cultivation of the bacterium strain Streptomyces sp. CNH-189, which was isolated from marine sediment. The planar structures of compounds 1-4 and 10 were elucidated by interpretation of MS, UV, and NMR spectroscopic data. The relative configurations of compounds 1-4 were determined via analysis of nuclear Overhauser effect (NOE) spectroscopic data, after which their absolute configurations were established by comparing the experimental electronic circular dichroism (ECD) spectra of compounds 1-4 to those of previously reported possible enantiomer models and DP4 calculations. Compound 3 displayed strong antibacterial activities against Bacillus subtilis, Kocuria rhizophila, and Staphylococcus aureus, with MIC values of 1, 2, and 2 μg/mL, respectively, whereas compound 1 exhibited weak antibacterial effects on these three strains, with a 16-32 μg/mL MIC value range.
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Affiliation(s)
- Min-Ji Ryu
- Department of Chemistry and Nanoscience, Ewha Womans University, Seoul 03760, Korea; (M.-J.R.); (P.F.H.); (J.L.); (E.-Y.L.); (S.-S.C.)
| | - Prima F. Hillman
- Department of Chemistry and Nanoscience, Ewha Womans University, Seoul 03760, Korea; (M.-J.R.); (P.F.H.); (J.L.); (E.-Y.L.); (S.-S.C.)
| | - Jihye Lee
- Department of Chemistry and Nanoscience, Ewha Womans University, Seoul 03760, Korea; (M.-J.R.); (P.F.H.); (J.L.); (E.-Y.L.); (S.-S.C.)
- Laboratories of Marine New Drugs, Redone Seoul, Seoul 08594, Korea
| | - Sunghoon Hwang
- Natural Products Research Institute, College of Pharmacy, Seoul National University, Seoul 08826, Korea; (S.H.); (D.-C.O.)
| | - Eun-Young Lee
- Department of Chemistry and Nanoscience, Ewha Womans University, Seoul 03760, Korea; (M.-J.R.); (P.F.H.); (J.L.); (E.-Y.L.); (S.-S.C.)
| | - Sun-Shin Cha
- Department of Chemistry and Nanoscience, Ewha Womans University, Seoul 03760, Korea; (M.-J.R.); (P.F.H.); (J.L.); (E.-Y.L.); (S.-S.C.)
| | - Inho Yang
- Department of Convergence Study on the Ocean Science and Technology, Korea Maritime and Ocean University, Busan 49112, Korea;
| | - Dong-Chan Oh
- Natural Products Research Institute, College of Pharmacy, Seoul National University, Seoul 08826, Korea; (S.H.); (D.-C.O.)
| | - Sang-Jip Nam
- Department of Chemistry and Nanoscience, Ewha Womans University, Seoul 03760, Korea; (M.-J.R.); (P.F.H.); (J.L.); (E.-Y.L.); (S.-S.C.)
- Correspondence: (S.-J.N.); (W.F.)
| | - William Fenical
- Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92093-0204, USA
- Correspondence: (S.-J.N.); (W.F.)
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17
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Patil R, Jadhav M, Salunke-Gawali S, Lande DN, Gejji SP, Chakravarty D. 1H and 13C NMR chemical shifts of 2- n-alkylamino-naphthalene-1,4-diones. Heliyon 2021; 7:e06044. [PMID: 33553738 PMCID: PMC7848645 DOI: 10.1016/j.heliyon.2021.e06044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2020] [Revised: 09/29/2020] [Accepted: 01/18/2021] [Indexed: 10/25/2022] Open
Abstract
1H as well as 13C chemical shifts of 32 compounds of C (3) substituted 2-(n-alkylamino)-3R-naphthalene-1,4-dione (where n-alkyl: methyl, to octyl, R = H, Cl, Br, and CH3) are investigated through 1H, 13C, DEPT, gDQCOSY, and gHSQCAD NMR experiments and M06-2X/6-311++G (d,p) density functional theory are discussed. Single crystal X-ray structure of Br-3, as well as 18 different derivatives of naphthalene-1,4-diones, are revealed for its inter and intra-molecular hydrogen bonding interactions.
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Affiliation(s)
- Rishikesh Patil
- Department of Chemistry, Savitribai Phule Pune University, Pune, 411007, Maharashtra State, India
| | - Mahesh Jadhav
- Department of Chemistry, Savitribai Phule Pune University, Pune, 411007, Maharashtra State, India
| | - Sunita Salunke-Gawali
- Department of Chemistry, Savitribai Phule Pune University, Pune, 411007, Maharashtra State, India
| | - Dipali N Lande
- Department of Chemistry, Savitribai Phule Pune University, Pune, 411007, Maharashtra State, India
| | - Shridhar P Gejji
- Department of Chemistry, Savitribai Phule Pune University, Pune, 411007, Maharashtra State, India
| | - Debamitra Chakravarty
- Central Instrumentation Facility, Savitribai Phule Pune University, Pune, 411007, Maharashtra State, India
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18
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Azzi E, Ghigo G, Parisotto S, Pellegrino F, Priola E, Renzi P, Deagostino A. Visible Light Mediated Photocatalytic N-Radical Cascade Reactivity of γ,δ-Unsaturated N-Arylsulfonylhydrazones: A General Approach to Structurally Diverse Tetrahydropyridazines. J Org Chem 2021; 86:3300-3323. [DOI: 10.1021/acs.joc.0c02605] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Emanuele Azzi
- Department of Chemistry, University of Torino, Via Pietro Giuria, 7-10125 Torino, Italy
| | - Giovanni Ghigo
- Department of Chemistry, University of Torino, Via Pietro Giuria, 7-10125 Torino, Italy
| | - Stefano Parisotto
- Department of Chemistry, University of Torino, Via Pietro Giuria, 7-10125 Torino, Italy
- Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, 106 91 Stockholm, Sweden
| | - Francesco Pellegrino
- Department of Chemistry, University of Torino, Via Pietro Giuria, 7-10125 Torino, Italy
| | - Emanuele Priola
- Department of Chemistry, University of Torino, Via Pietro Giuria, 7-10125 Torino, Italy
| | - Polyssena Renzi
- Department of Chemistry, University of Torino, Via Pietro Giuria, 7-10125 Torino, Italy
| | - Annamaria Deagostino
- Department of Chemistry, University of Torino, Via Pietro Giuria, 7-10125 Torino, Italy
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19
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Wang C, Lu Y, Cao S. Antimicrobial compounds from marine actinomycetes. Arch Pharm Res 2020; 43:677-704. [PMID: 32691395 DOI: 10.1007/s12272-020-01251-0] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Accepted: 07/14/2020] [Indexed: 04/03/2023]
Abstract
Marine actinomycetes were the main origin of marine natural products in the past 40 years. This review was to present the sources, structures and antimicrobial activities of 313 new natural products from marine actinomycetes reported from 1976 to 2019.
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Affiliation(s)
- Cong Wang
- Department of Pharmaceutical Sciences, Daniel K. Inouye College of Pharmacy, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI, 96720, USA.,Guangxi Key Laboratory of Chemistry and Engineering of Forest Products, School of Chemistry and Chemical Engineering, Guangxi University for Nationalities, Nanning, 530006, China
| | - Yuanyu Lu
- Guangxi Key Laboratory of Chemistry and Engineering of Forest Products, School of Chemistry and Chemical Engineering, Guangxi University for Nationalities, Nanning, 530006, China
| | - Shugeng Cao
- Department of Pharmaceutical Sciences, Daniel K. Inouye College of Pharmacy, University of Hawai'i at Hilo, 200 W. Kawili St., Hilo, HI, 96720, USA.
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20
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Novel enzymatic reduction of α-amido- and α-cyanoalkyl-β-keto esters catalyzed by ketoreductases. MOLECULAR CATALYSIS 2020. [DOI: 10.1016/j.mcat.2020.110952] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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21
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Nong XH, Tu ZC, Qi SH. Ansamycin derivatives from the marine-derived Streptomyces sp. SCSGAA 0027 and their cytotoxic and antiviral activities. Bioorg Med Chem Lett 2020; 30:127168. [DOI: 10.1016/j.bmcl.2020.127168] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Revised: 03/30/2020] [Accepted: 04/02/2020] [Indexed: 11/26/2022]
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22
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Uyanik M, Sahara N, Katade O, Ishihara K. Chemoselective Oxidative Spiroetherification and Spiroamination of Arenols Using I+/Oxone Catalysis. Org Lett 2019; 22:560-564. [DOI: 10.1021/acs.orglett.9b04324] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Muhammet Uyanik
- Graduate School of Engineering, Nagoya University, Furo-cho, Chikusa, Nagoya 464-8603, Japan
| | - Naoto Sahara
- Graduate School of Engineering, Nagoya University, Furo-cho, Chikusa, Nagoya 464-8603, Japan
| | - Outa Katade
- Graduate School of Engineering, Nagoya University, Furo-cho, Chikusa, Nagoya 464-8603, Japan
| | - Kazuaki Ishihara
- Graduate School of Engineering, Nagoya University, Furo-cho, Chikusa, Nagoya 464-8603, Japan
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23
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Rivera‐Chao E, Mitxelena M, Varela JA, Fañanás‐Mastral M. Copper‐Catalyzed Enantioselective Allylboration of Alkynes: Synthesis of Highly Versatile Multifunctional Building Blocks. Angew Chem Int Ed Engl 2019; 58:18230-18234. [DOI: 10.1002/anie.201910707] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2019] [Revised: 09/13/2019] [Indexed: 01/23/2023]
Affiliation(s)
- Eva Rivera‐Chao
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Maider Mitxelena
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Jesús A. Varela
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Martín Fañanás‐Mastral
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela 15782 Santiago de Compostela Spain
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24
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Ganesh Kumar M, Veeresh K, Nalawade SA, Nithun RV, Gopi HN. Direct Transformation of N-Protected α,β-Unsaturated γ-Amino Amides into γ-Lactams through a Base-Mediated Molecular Rearrangement. J Org Chem 2019; 84:15145-15153. [PMID: 31657563 DOI: 10.1021/acs.joc.9b01936] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Here, we are reporting a single-step transformation of N-protected α,β-unsaturated γ-amino amides into 5,5-disubstituted γ-lactams through a base-mediated new molecular rearrangement. In contrast to the known N- to C(O) cyclization of saturated γ-amino acids into corresponding γ-lactams, the new rearrangement involves the cyclization between N-terminal Cγ- to C-terminal amide N. The cyclization process was initiated by the migration of double bond from α,β → β,γ position. The enamine-imine tautomerization of the new β,γ-double bond and subsequent 5-exo-trig cyclization of terminal amide leads to the formation of N-protected 5,5-disubstituted γ-lactam. The structures of various γ-lactams obtained from the rearrangement were studied in single crystals. Overall, the results reported here demonstrate the facile and single-step transformation of N-protected α,β-unsaturated γ-amino amides into γ-lactams and provided an excellent opportunity to construct small-molecule peptidomimetics.
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Affiliation(s)
- Mothukuri Ganesh Kumar
- Department of Chemistry , Indian Institute of Science Education and Research , Dr. Homi Bhabha Road , Pune 411 008 , India
| | - Kuruva Veeresh
- Department of Chemistry , Indian Institute of Science Education and Research , Dr. Homi Bhabha Road , Pune 411 008 , India
| | - Sachin A Nalawade
- Department of Chemistry , Indian Institute of Science Education and Research , Dr. Homi Bhabha Road , Pune 411 008 , India
| | - Raj V Nithun
- Department of Chemistry , Indian Institute of Science Education and Research , Dr. Homi Bhabha Road , Pune 411 008 , India
| | - Hosahudya N Gopi
- Department of Chemistry , Indian Institute of Science Education and Research , Dr. Homi Bhabha Road , Pune 411 008 , India
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25
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Demachi A, Uchida R, Arima S, Nagamitsu T, Hashimoto J, Komatsu M, Kozone I, Shin-Ya K, Tomoda H, Ikeda H. An Unusual Extender Unit Is Incorporated into the Modular Polyketide Synthase of Scopranones Biosynthesis. Biochemistry 2019; 58:5066-5073. [PMID: 31756295 DOI: 10.1021/acs.biochem.9b00908] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Scopranones, produced by Streptomyces sp. BYK-11038, are the novel bone morphogenetic protein inhibitors characterized by atypical two scoop-like moieties and a 3-furanone moiety. Two scoop-like moieties connected to a 3-furanone have not previously been reported in natural products, and their biosynthesis must occur via a unique pathway. Feeding experiments using 13C-labeled precursors indicated that scopranones were synthesized from three acetates and three butyrates in polyketide-type biosynthesis. Genome mining of Streptomyces sp. BYK-11038 revealed that the candidate biosynthetic gene cluster contains 21 open reading frames (ORFs), including three modular polyketide synthases (PKSs; SprA, SprB, and SprC), which were composed of 4 modules with one loading module and 18 additional ORFs (SprD to SprU) spanning a distance of 55 kbp. The characterization of in-frame deletion mutants and feeding experiments with the predicted extender units indicated that two genes, sprP and sprR, encoding discrete 3-oxoacyl-ACP synthases, and a gene, sprO, encoding crotonyl-CoA reductase, were involved in assembling an unusual C8 branched extender unit, 2-(2-ethylbutyl)malonyl-CoA. Additionally, three ORFs, sprM, sprN, and sprT, encoding cytochrome P450s and a monooxygenase, are important tailoring enzymes in post-PKS modification. SprT is an essential enzyme for decarboxylative ring contraction via oxidation, which converts the 2-pyranone to a 3-furanone.
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Affiliation(s)
- Ayumu Demachi
- Medicinal Research Laboratory, School of Pharmacy and Graduate School of Pharmaceutical Sciences , Kitasato University , 5-9-1 Shirokane , Minato-ku , Tokyo 108-8641 , Japan
| | - Ryuji Uchida
- Faculty of Pharmaceutical Sciences , Tohoku Medical and Pharmaceutical University , 4-4-1 Komatsushima, Aoba-ku , Sendai , Miyagi 981-8558 , Japan
| | - Shiho Arima
- Medicinal Research Laboratory, School of Pharmacy and Graduate School of Pharmaceutical Sciences , Kitasato University , 5-9-1 Shirokane , Minato-ku , Tokyo 108-8641 , Japan
| | - Tohru Nagamitsu
- Medicinal Research Laboratory, School of Pharmacy and Graduate School of Pharmaceutical Sciences , Kitasato University , 5-9-1 Shirokane , Minato-ku , Tokyo 108-8641 , Japan
| | - Junko Hashimoto
- Japan Biological Informatics Consortium , 2-4-7 Aomi, Koto-ku , Tokyo 135-8073 , Japan
| | - Mamoru Komatsu
- Kitasato Institute for Life Sciences , Kitasato University , 1-15-1 Kitasato, Minami-ku , Sagamihara , Kanagawa 252-0373 , Japan
| | - Ikuko Kozone
- Japan Biological Informatics Consortium , 2-4-7 Aomi, Koto-ku , Tokyo 135-8073 , Japan
| | - Kazuo Shin-Ya
- National Institute of Advanced Industrial Science and Technology , 2-4-7 Aomi, Koto-ku , Tokyo 135-0064 , Japan
| | - Hiroshi Tomoda
- Medicinal Research Laboratory, School of Pharmacy and Graduate School of Pharmaceutical Sciences , Kitasato University , 5-9-1 Shirokane , Minato-ku , Tokyo 108-8641 , Japan
| | - Haruo Ikeda
- Kitasato Institute for Life Sciences , Kitasato University , 1-15-1 Kitasato, Minami-ku , Sagamihara , Kanagawa 252-0373 , Japan
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26
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Rivera‐Chao E, Mitxelena M, Varela JA, Fañanás‐Mastral M. Copper‐Catalyzed Enantioselective Allylboration of Alkynes: Synthesis of Highly Versatile Multifunctional Building Blocks. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201910707] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Eva Rivera‐Chao
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Maider Mitxelena
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Jesús A. Varela
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Martín Fañanás‐Mastral
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS)Departamento de Química OrgánicaUniversidade de Santiago de Compostela 15782 Santiago de Compostela Spain
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27
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Guo S, Liu Y, Zhao L, Zhang X, Fan X. Rhodium-Catalyzed Selective Oxidative (Spiro)annulation of 2-Arylindoles by Using Benzoquinone as a C2 or C1 Synthon. Org Lett 2019; 21:6437-6441. [PMID: 31386384 DOI: 10.1021/acs.orglett.9b02336] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Rhodium-catalyzed substrate-tunable oxidative annulation and spiroannulation reactions of 2-arylindoles with benzoquinone leading to 9H-dibenzo[a,c]carbazol-3-ols and new spirocyclic products are reported. Intriguingly, with 2-aryl-substituted indoles, benzoquinone could act as a C2 synthon to afford dibenzo[a,c]carbazoles. On the contrary, when 2-aryl-3-substituted indoles were used, benzoquinone switched to act as a C1 synthon to furnish spirocyclic compounds. In addition, further transformations of the obtained products demonstrate the synthetic utility of the present protocol.
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Affiliation(s)
- Shenghai Guo
- Henan Key Laboratory of Organic Functional Molecules and Drug Innovation, Collaborative Innovation Center of Henan Province for Green Manufacturing of Fine Chemicals, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, School of Chemistry and Chemical Engineering , Henan Normal University , Xinxiang , Henan 453007 , China
| | - Yangfan Liu
- Henan Key Laboratory of Organic Functional Molecules and Drug Innovation, Collaborative Innovation Center of Henan Province for Green Manufacturing of Fine Chemicals, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, School of Chemistry and Chemical Engineering , Henan Normal University , Xinxiang , Henan 453007 , China
| | - Lu Zhao
- Henan Key Laboratory of Organic Functional Molecules and Drug Innovation, Collaborative Innovation Center of Henan Province for Green Manufacturing of Fine Chemicals, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, School of Chemistry and Chemical Engineering , Henan Normal University , Xinxiang , Henan 453007 , China
| | - Xinying Zhang
- Henan Key Laboratory of Organic Functional Molecules and Drug Innovation, Collaborative Innovation Center of Henan Province for Green Manufacturing of Fine Chemicals, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, School of Chemistry and Chemical Engineering , Henan Normal University , Xinxiang , Henan 453007 , China
| | - Xuesen Fan
- Henan Key Laboratory of Organic Functional Molecules and Drug Innovation, Collaborative Innovation Center of Henan Province for Green Manufacturing of Fine Chemicals, Key Laboratory of Green Chemical Media and Reactions, Ministry of Education, School of Chemistry and Chemical Engineering , Henan Normal University , Xinxiang , Henan 453007 , China
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28
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Ryu MJ, Hwang S, Kim S, Yang I, Oh DC, Nam SJ, Fenical W. Meroindenon and Merochlorins E and F, Antibacterial Meroterpenoids from a Marine-Derived Sediment Bacterium of the Genus Streptomyces. Org Lett 2019; 21:5779-5783. [PMID: 31298867 DOI: 10.1021/acs.orglett.9b01440] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Meroterpenoids, meroindenon (1) and merochlorins E (2) and F (3), were isolated from a marine-derived bacterium belonging to the genus Streptomyces. Their chemical structures were established using extensive analysis of MS, UV, ECD, and NMR spectroscopic data. Compounds 1-3 possess a tetrahydroxynaphthalene core and a C15-isoprene unit. Compounds 2 and 3 exhibited strong antibacterial activities against B. subtilis, K. rhizophila, and S. aureus, with a range of MIC values from 1 to 2 μg/mL.
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Affiliation(s)
- Min-Ji Ryu
- Department of Chemistry and Nanoscience , Ewha Womans University , Seoul 03760 , Republic of Korea
| | - Sunghoon Hwang
- Natural Products Research Institute, College of Pharmacy , Seoul National University , Seoul 08826 , Republic of Korea
| | - Sojeong Kim
- Graduate School of Industrial Pharmaceutical Sciences , Ewha Womans University , Seoul 03760 , Republic of Korea
| | - Inho Yang
- Department of Convergence Study on the Ocean Science and Technology , Korea Maritime and Ocean University , Busan 49112 , Republic of Korea
| | - Dong-Chan Oh
- Natural Products Research Institute, College of Pharmacy , Seoul National University , Seoul 08826 , Republic of Korea
| | - Sang-Jip Nam
- Department of Chemistry and Nanoscience , Ewha Womans University , Seoul 03760 , Republic of Korea
| | - William Fenical
- Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography , University of California San Diego , La Jolla , California 92093-0204 , United States
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29
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Bilyk O, Samborskyy M, Leadlay PF. The biosynthetic pathway to ossamycin, a macrocyclic polyketide bearing a spiroacetal moiety. PLoS One 2019; 14:e0215958. [PMID: 31039188 PMCID: PMC6490886 DOI: 10.1371/journal.pone.0215958] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2019] [Accepted: 04/11/2019] [Indexed: 01/08/2023] Open
Abstract
Ossamycin from Streptomyces hygroscopicus var. ossamyceticus is an antifungal and cytotoxic polyketide and a potent inhibitor of the mitochondrial ATPase. Analysis of a near-complete genome sequence of the ossamycin producer has allowed the identification of the 127-kbp ossamycin biosynthetic gene cluster. The presence in the cluster of a specific crotonyl-CoA carboxylase/reductase homologue suggests that the 5-methylhexanoate extension unit used in construction of the macrocyclic core is incorporated intact from the unusual precursor isobutyrylmalonyl-CoA. Surprisingly, the modular polyketide synthase uses only 14 extension modules to accomplish 15 cycles of polyketide chain extension, a rare example of programmed iteration on a modular polyketide synthase. Specific deletion of genes encoding cytochrome P450 enzymes has given insight into the late-stage tailoring of the ossamycin macrocycle required for the attachment of the unusual 2,3,4,6-deoxyaminohexose sugar l-ossamine to C-8 of the ossamycin macrocycle. The ossamycin cluster also encodes a putative spirocyclase enzyme, OssO, which may play a role in establishing the characteristic spiroketal moiety of the natural product.
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Affiliation(s)
- Oksana Bilyk
- Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom
- * E-mail:
| | - Markiyan Samborskyy
- Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom
| | - Peter F. Leadlay
- Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom
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30
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Nofiani R, Philmus B, Nindita Y, Mahmud T. 3-Ketoacyl-ACP synthase (KAS) III homologues and their roles in natural product biosynthesis. MEDCHEMCOMM 2019; 10:1517-1530. [PMID: 31673313 DOI: 10.1039/c9md00162j] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2019] [Accepted: 04/29/2019] [Indexed: 11/21/2022]
Abstract
The 3-ketoacyl-ACP synthase (KAS) III proteins are one of the most abundant enzymes in nature, as they are involved in the biosynthesis of fatty acids and natural products. KAS III enzymes catalyse a carbon-carbon bond formation reaction that involves the α-carbon of a thioester and the carbonyl carbon of another thioester. In addition to the typical KAS III enzymes involved in fatty acid and polyketide biosynthesis, there are proteins homologous to KAS III enzymes that catalyse reactions that are different from that of the traditional KAS III enzymes. Those include enzymes that are responsible for a head-to-head condensation reaction, the formation of acetoacetyl-CoA in mevalonate biosynthesis, tailoring processes via C-O bond formation or esterification, as well as amide formation. This review article highlights the diverse reactions catalysed by this class of enzymes and their role in natural product biosynthesis.
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Affiliation(s)
- Risa Nofiani
- Department of Pharmaceutical Sciences , Oregon State University , Corvallis , OR 97333 , USA . .,Department of Chemistry , Universitas Tanjungpura , Pontianak , Indonesia
| | - Benjamin Philmus
- Department of Pharmaceutical Sciences , Oregon State University , Corvallis , OR 97333 , USA .
| | - Yosi Nindita
- Department of Pharmaceutical Sciences , Oregon State University , Corvallis , OR 97333 , USA .
| | - Taifo Mahmud
- Department of Pharmaceutical Sciences , Oregon State University , Corvallis , OR 97333 , USA .
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31
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Brandstätter M, Freis M, Huwyler N, Carreira EM. Total Synthesis of (−)‐Merochlorin A. Angew Chem Int Ed Engl 2019; 58:2490-2494. [DOI: 10.1002/anie.201813090] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2018] [Indexed: 01/07/2023]
Affiliation(s)
- Marco Brandstätter
- Laboratorium für Organische Chemie, HCI H335Eidgenössiche Technische Hochschule Zürich Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
| | - Manuel Freis
- Laboratorium für Organische Chemie, HCI H335Eidgenössiche Technische Hochschule Zürich Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
| | - Nikolas Huwyler
- Laboratorium für Organische Chemie, HCI H335Eidgenössiche Technische Hochschule Zürich Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
| | - Erick M. Carreira
- Laboratorium für Organische Chemie, HCI H335Eidgenössiche Technische Hochschule Zürich Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
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32
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Brandstätter M, Freis M, Huwyler N, Carreira EM. Total Synthesis of (−)-Merochlorin A. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201813090] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Marco Brandstätter
- Laboratorium für Organische Chemie, HCI H335; Eidgenössiche Technische Hochschule Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
| | - Manuel Freis
- Laboratorium für Organische Chemie, HCI H335; Eidgenössiche Technische Hochschule Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
| | - Nikolas Huwyler
- Laboratorium für Organische Chemie, HCI H335; Eidgenössiche Technische Hochschule Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
| | - Erick M. Carreira
- Laboratorium für Organische Chemie, HCI H335; Eidgenössiche Technische Hochschule Zürich; Vladimir-Prelog-Weg 3 8093 Zürich Switzerland
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33
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Dehydrative Synthesis of Functionalized Skipped Dienes from Stabilized Phosphonium Ylides and Allylic Alcohols in Water. Adv Synth Catal 2019. [DOI: 10.1002/adsc.201801266] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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34
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Zhang Z, Cao P, Shang NN, Yang J, Wang L, Yan Y, Huang SX. Naphthomycin-derived macrolactams with two new carbon skeletons from endophytic Streptomyces. Org Chem Front 2019. [DOI: 10.1039/c8qo01107a] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A cytotoxic ansamycin class of natural products with two new carbon skeletons was isolated and characterized from endophytic Streptomyces.
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Affiliation(s)
- Zhouxin Zhang
- State Key Laboratory of Phytochemistry and Plant Resources in West China
- CAS Center for Excellence in Molecular Plant Sciences
- Kunming Institute of Botany
- Chinese Academy of Sciences
- Kunming 650204
| | - Pei Cao
- State Key Laboratory of Phytochemistry and Plant Resources in West China
- CAS Center for Excellence in Molecular Plant Sciences
- Kunming Institute of Botany
- Chinese Academy of Sciences
- Kunming 650204
| | - Ning-Ning Shang
- State Key Laboratory of Phytochemistry and Plant Resources in West China
- CAS Center for Excellence in Molecular Plant Sciences
- Kunming Institute of Botany
- Chinese Academy of Sciences
- Kunming 650204
| | - Jing Yang
- State Key Laboratory of Phytochemistry and Plant Resources in West China
- CAS Center for Excellence in Molecular Plant Sciences
- Kunming Institute of Botany
- Chinese Academy of Sciences
- Kunming 650204
| | - Li Wang
- State Key Laboratory of Phytochemistry and Plant Resources in West China
- CAS Center for Excellence in Molecular Plant Sciences
- Kunming Institute of Botany
- Chinese Academy of Sciences
- Kunming 650204
| | - Yijun Yan
- State Key Laboratory of Phytochemistry and Plant Resources in West China
- CAS Center for Excellence in Molecular Plant Sciences
- Kunming Institute of Botany
- Chinese Academy of Sciences
- Kunming 650204
| | - Sheng-Xiong Huang
- State Key Laboratory of Phytochemistry and Plant Resources in West China
- CAS Center for Excellence in Molecular Plant Sciences
- Kunming Institute of Botany
- Chinese Academy of Sciences
- Kunming 650204
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35
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Li Z, Zhu D, Shen Y. Discovery of novel bioactive natural products driven by genome mining. Drug Discov Ther 2018; 12:318-328. [DOI: 10.5582/ddt.2018.01066] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Zhongyue Li
- Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University
| | - Deyu Zhu
- School of Basic Medical Sciences, Shandong University
| | - Yuemao Shen
- Key Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University
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36
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Fan Y, Wang C, Wang L, Chairoungdua A, Piyachaturawat P, Fu P, Zhu W. New Ansamycins from the Deep-Sea-Derived Bacterium Ochrobactrum sp. OUCMDZ-2164. Mar Drugs 2018; 16:md16080282. [PMID: 30111735 PMCID: PMC6117703 DOI: 10.3390/md16080282] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2018] [Revised: 08/07/2018] [Accepted: 08/12/2018] [Indexed: 01/19/2023] Open
Abstract
Two new ansamycins, trienomycins H (1) and I (2), together with the known trienomycinol (3), were isolated from the fermentation broth of the deep-sea-derived bacterium Ochrobactrum sp. OUCMDZ-2164. Their structures, including their absolute configurations, were elucidated based on spectroscopic analyses, ECD spectra, and Marfey’s method. Compound 1 exhibited cytotoxic effects on A549 and K562 cell lines with IC50 values of 15 and 23 μM, respectively.
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Affiliation(s)
- Yaqin Fan
- Key Laboratory of Marine Drugs, Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China.
- Laboratory for Marine Drugs and Bioproducts, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266003, China.
| | - Cong Wang
- Key Laboratory of Marine Drugs, Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China.
- Guangxi Key Laboratory of Chemistry and Engineering of Forest Products, School of Chemistry and Chemical Engineering, Guangxi University for Nationalities, Nanning 530006, China.
| | - Liping Wang
- State Key Laboratory of Functions and Applications of Medicinal Plants, Guizhou Medical University, Guiyang 550014, China.
| | - Arthit Chairoungdua
- Department of Physiology, Faculty of Science, Mahidol University, Bangkok 10400, Thailand.
| | - Pawinee Piyachaturawat
- Department of Physiology, Faculty of Science, Mahidol University, Bangkok 10400, Thailand.
| | - Peng Fu
- Key Laboratory of Marine Drugs, Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China.
- Laboratory for Marine Drugs and Bioproducts, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266003, China.
| | - Weiming Zhu
- Key Laboratory of Marine Drugs, Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China.
- Laboratory for Marine Drugs and Bioproducts, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266003, China.
- State Key Laboratory of Functions and Applications of Medicinal Plants, Guizhou Medical University, Guiyang 550014, China.
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37
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Parisotto S, Palagi L, Prandi C, Deagostino A. Cooperative Iodide Pd(0)-Catalysed Coupling of Alkoxyallenes and N
-Tosylhydrazones: A Selective Synthesis of Conjugated and Skipped Dienes. Chemistry 2018; 24:5484-5488. [DOI: 10.1002/chem.201800765] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2018] [Indexed: 01/02/2023]
Affiliation(s)
- Stefano Parisotto
- Department of Chemistry; University of Torino; Via Giuria 7 Torino 10125 Italy
| | - Lorenzo Palagi
- Department of Chemistry; University of Torino; Via Giuria 7 Torino 10125 Italy
| | - Cristina Prandi
- Department of Chemistry; University of Torino; Via Giuria 7 Torino 10125 Italy
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38
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Mukherjee K, Shankar M, Ghosh K, Sahoo AK. An Orchestrated Unsymmetrical Annulation Episode of C(sp 2)-H Bonds with Alkynes and Quinones: Access to Spiro-isoquinolones. Org Lett 2018; 20:1914-1918. [PMID: 29561160 DOI: 10.1021/acs.orglett.8b00468] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A nontrivial Ru-catalyzed one-pot sequential oxidative coupling of a (hetero)arene/vinylic/chromene system with alkyne and quinone is presented; the methyl phenyl sulfoximine (MPS) directing group is vital. This cyclization forms four (two C-C and two C-N) bonds in a single operation and produces unusual spiro-fused-isoquinolones with a broad scope. The release of phenyl methyl sulfoxide makes the MPS group transformable. A deuterium scrambling study sheds light on the reaction path.
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Affiliation(s)
- Kallol Mukherjee
- School of Chemistry , University of Hyderabad , Hyderabad - 500046 , India
| | - Majji Shankar
- School of Chemistry , University of Hyderabad , Hyderabad - 500046 , India
| | - Koushik Ghosh
- School of Chemistry , University of Hyderabad , Hyderabad - 500046 , India
| | - Akhila K Sahoo
- School of Chemistry , University of Hyderabad , Hyderabad - 500046 , India
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39
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Moore BS. Asymmetric Alkene and Arene Halofunctionalization Reactions in Meroterpenoid Biosynthesis. Synlett 2018; 29:401-409. [PMID: 31031546 PMCID: PMC6483395 DOI: 10.1055/s-0036-1590919] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Meroterpenoid natural products are important bioactive molecules with broad distribution throughout nature. In Streptomyces bacteria, naphthoquinone-based meroterpenoids comprise a simple yet structurally fascinating group of natural product antibiotics that are enzymatically constructed through a series of asymmetric alkene and arene halofunctionalization reactions. This account article highlights our discovery and characterization of a group of vanadium-dependent chloroperoxidase enzymes that catalyze halogen-assisted cyclization and rearrangement reactions and have inspired biomimetic syntheses of numerous meroterpenoid natural products.
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Affiliation(s)
- Bradley S Moore
- Scripps Institution of Oceanography & Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California at San Diego, La Jolla, CA 92093, USA
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40
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Abstract
Covering: 2016. Previous review: Nat. Prod. Rep., 2017, 34, 235-294This review covers the literature published in 2016 for marine natural products (MNPs), with 757 citations (643 for the period January to December 2016) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1277 in 432 papers for 2016), together with the relevant biological activities, source organisms and country of origin. Reviews, biosynthetic studies, first syntheses, and syntheses that led to the revision of structures or stereochemistries, have been included.
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Affiliation(s)
- John W Blunt
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch, New Zealand
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41
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Mathews II, Allison K, Robbins T, Lyubimov AY, Uervirojnangkoorn M, Brunger AT, Khosla C, DeMirci H, McPhillips SE, Hollenbeck M, Soltis M, Cohen AE. The Conformational Flexibility of the Acyltransferase from the Disorazole Polyketide Synthase Is Revealed by an X-ray Free-Electron Laser Using a Room-Temperature Sample Delivery Method for Serial Crystallography. Biochemistry 2017; 56:4751-4756. [PMID: 28832129 PMCID: PMC5721673 DOI: 10.1021/acs.biochem.7b00711] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The crystal structure of the trans-acyltransferase (AT) from the disorazole polyketide synthase (PKS) was determined at room temperature to a resolution of 2.5 Å using a new method for the direct delivery of the sample into an X-ray free-electron laser. A novel sample extractor efficiently delivered limited quantities of microcrystals directly from the native crystallization solution into the X-ray beam at room temperature. The AT structure revealed important catalytic features of this core PKS enzyme, including the occurrence of conformational changes around the active site. The implications of these conformational changes for polyketide synthase reaction dynamics are discussed.
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Affiliation(s)
- Irimpan I Mathews
- Stanford Synchrotron Radiation Lightsource , 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Kim Allison
- Stanford Synchrotron Radiation Lightsource , 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | | | - Artem Y Lyubimov
- Stanford Synchrotron Radiation Lightsource , 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | | | | | | | - Hasan DeMirci
- Stanford Synchrotron Radiation Lightsource , 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Scott E McPhillips
- Stanford Synchrotron Radiation Lightsource , 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Michael Hollenbeck
- Stanford Synchrotron Radiation Lightsource , 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Michael Soltis
- Stanford Synchrotron Radiation Lightsource , 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Aina E Cohen
- Stanford Synchrotron Radiation Lightsource , 2575 Sand Hill Road, Menlo Park, California 94025, United States
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42
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Mateos J, Rivera-Chao E, Fañanás-Mastral M. Synergistic Copper/Palladium Catalysis for the Regio- and Stereoselective Synthesis of Borylated Skipped Dienes. ACS Catal 2017. [DOI: 10.1021/acscatal.7b01833] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Jaime Mateos
- Centro Singular de Investigación
en Química Biolóxica e Materiais Moleculares (CIQUS),
Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
| | - Eva Rivera-Chao
- Centro Singular de Investigación
en Química Biolóxica e Materiais Moleculares (CIQUS),
Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
| | - Martín Fañanás-Mastral
- Centro Singular de Investigación
en Química Biolóxica e Materiais Moleculares (CIQUS),
Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
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43
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Zhang J, Li S, Wu X, Guo Z, Lu C, Shen Y. Nam7 Hydroxylase Is Responsible for the Formation of the Naphthalenic Ring in the Biosynthesis of Neoansamycins. Org Lett 2017; 19:2442-2445. [PMID: 28441026 DOI: 10.1021/acs.orglett.7b01083] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Juanli Zhang
- Key
Laboratory of Chemical Biology (Ministry of Education), School of
Pharmaceutical Sciences, Shandong University, Jinan, Shandong 250012, P. R. China
- Department
of Pharmacy, Xijing Hospital, The Fourth Military Medical University, Changle West Street 15, Xi’an, Shaanxi 710032, P. R. China
| | - Shanren Li
- Key
Laboratory of Chemical Biology (Ministry of Education), School of
Pharmaceutical Sciences, Shandong University, Jinan, Shandong 250012, P. R. China
| | - Xingkang Wu
- Key
Laboratory of Chemical Biology (Ministry of Education), School of
Pharmaceutical Sciences, Shandong University, Jinan, Shandong 250012, P. R. China
| | - Zhixing Guo
- Key
Laboratory of Chemical Biology (Ministry of Education), School of
Pharmaceutical Sciences, Shandong University, Jinan, Shandong 250012, P. R. China
| | - Chunhua Lu
- Key
Laboratory of Chemical Biology (Ministry of Education), School of
Pharmaceutical Sciences, Shandong University, Jinan, Shandong 250012, P. R. China
| | - Yuemao Shen
- Key
Laboratory of Chemical Biology (Ministry of Education), School of
Pharmaceutical Sciences, Shandong University, Jinan, Shandong 250012, P. R. China
- State
Key Laboratory of Microbial Technology, Shandong University, Jinan, Shandong 250100, P. R. China
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45
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Involucratusins A-H: Unusual Cadinane Dimers from Stahlianthus involucratus with Multidrug Resistance Reversal Activity. Sci Rep 2016; 6:29744. [PMID: 27406627 PMCID: PMC4942826 DOI: 10.1038/srep29744] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2016] [Accepted: 06/22/2016] [Indexed: 11/29/2022] Open
Abstract
Three novel cadinane dimers, involucratusins A–C (1–3), five unique nor-cadinane-dimers, involucratusins D–H (4–8), together with a known compound (9) were isolated from the rhizomes of Stahlianthus involucratus. Their challenging structures and absolute configurations were determined by spectroscopic data, CD experimentation, chemical conversions and single-crystal X-ray diffraction. Compounds 1–3 are unusual cadinane dimers with new connection and novel cores. Compound 4 is a unique nor-cadinane-dimer, and 5 and 6 are two pairs of hemiketal racemates with novel dinor-cadinane-dimer backbone. Compounds 7 and 8 represent unusual dodecanor-cadinane-dimer and tetradecanor-cadinane-dimer carbon skeletons, respectively. The possible biogenetic pathways of 1–8 were proposed, involving nucleophilic addition, SN2 nucleophilic displacement, [3 + 3] benzannulation, oxidative cleavage, decarboxylation, and oxidative phenol coupling reactions. Multidrug resistance (MDR) reversal activity assay of the isolates were evaluated in doxorubicin-resistant human breast cancer cells (MCF-7/DOX). The combined use of these novel cadinane dimers at a concentration of 10 μM increased the cytotoxicity of doxorubicin by 2.2–5.8-fold. It is the first report about the MDR reversal activity of cadinane dimers.
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46
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Le TC, Yang I, Yoon YJ, Nam SJ, Fenical W. Ansalactams B–D Illustrate Further Biosynthetic Plasticity within the Ansamycin Pathway. Org Lett 2016; 18:2256-9. [DOI: 10.1021/acs.orglett.6b00892] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Tu Cam Le
- Department
of Chemistry and Nano Science, Global Top 5 program, Ewha Womans University, Seoul 03760, Korea
| | - Inho Yang
- Department
of Chemistry and Nano Science, Global Top 5 program, Ewha Womans University, Seoul 03760, Korea
| | - Yeo Joon Yoon
- Department
of Chemistry and Nano Science, Global Top 5 program, Ewha Womans University, Seoul 03760, Korea
| | - Sang-Jip Nam
- Department
of Chemistry and Nano Science, Global Top 5 program, Ewha Womans University, Seoul 03760, Korea
| | - William Fenical
- Center
for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, California 92093-0204, United States
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47
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Kong D, Li M, Wang R, Zi G, Hou G. Highly efficient asymmetric hydrogenation of cyano-substituted acrylate esters for synthesis of chiral γ-lactams and amino acids. Org Biomol Chem 2016; 14:1216-20. [DOI: 10.1039/c5ob02422f] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A highly efficient Rh-catalyzed asymmetric hydrogenation of 3-cyano acrylate esters is reported for the first time, which provides straightforward access to chiral cyano compounds with excellent enantioselectivities (up to 98% ee) and high turnover numbers (TON up to 10 000).
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Affiliation(s)
- Duanyang Kong
- Key Laboratory of Radiopharmaceuticals
- College of Chemistry
- Beijing Normal University
- Beijing 100875
- China
| | - Meina Li
- Key Laboratory of Radiopharmaceuticals
- College of Chemistry
- Beijing Normal University
- Beijing 100875
- China
| | - Rui Wang
- Key Laboratory of Radiopharmaceuticals
- College of Chemistry
- Beijing Normal University
- Beijing 100875
- China
| | - Guofu Zi
- Key Laboratory of Radiopharmaceuticals
- College of Chemistry
- Beijing Normal University
- Beijing 100875
- China
| | - Guohua Hou
- Key Laboratory of Radiopharmaceuticals
- College of Chemistry
- Beijing Normal University
- Beijing 100875
- China
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48
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Reddy RS, Zheng S, Lagishetti C, You H, He Y. A practical and efficient route to heteraphanes: synthesis of structurally simplified analogues of ansamycins. RSC Adv 2016. [DOI: 10.1039/c6ra16247a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The intramolecular Mitsunobu reaction has been employed for the practical synthesis of a wide variety of heteraphanes. This strategy enabled the efficient synthesis of a diverse range of macrocycles with varying ring sizes under mild conditions.
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Affiliation(s)
- R. Santhosh Reddy
- School of Pharmaceutical Sciences and Innovative Drug Research Centre
- Chongqing University
- Shapingba
- P.R. China
| | - Shaojun Zheng
- School of Pharmaceutical Sciences and Innovative Drug Research Centre
- Chongqing University
- Shapingba
- P.R. China
| | - Chandraiah Lagishetti
- School of Pharmaceutical Sciences and Innovative Drug Research Centre
- Chongqing University
- Shapingba
- P.R. China
| | - Hengyao You
- School of Pharmaceutical Sciences and Innovative Drug Research Centre
- Chongqing University
- Shapingba
- P.R. China
| | - Yun He
- School of Pharmaceutical Sciences and Innovative Drug Research Centre
- Chongqing University
- Shapingba
- P.R. China
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49
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Ma CL, Li XH, Yu XL, Zhu XL, Hu YZ, Dong XW, Tan B, Liu XY. Gold-catalyzed tandem synthesis of bioactive spiro-dipyrroloquinolines and its application in the one-step synthesis of incargranine B aglycone and seneciobipyrrolidine (I). Org Chem Front 2016. [DOI: 10.1039/c5qo00354g] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
The Au-catalyzed tandem reaction provided simple and efficient access to spiro-dipyrroloquinolines and incargranine B aglycone and (±)-seneciobipyrrolidine (I).
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Affiliation(s)
- Can-Liang Ma
- Zhejiang Province Key Laboratory of Anti-Cancer Drug Research
- College of Pharmaceutical Sciences
- Zhejiang University
- Hangzhou
- P. R. China
| | - Xiao-Hua Li
- Department of Chemistry
- South University of Science and Technology of China
- Shenzhen
- P. R. China
| | - Xiao-Long Yu
- Department of Chemistry
- South University of Science and Technology of China
- Shenzhen
- P. R. China
| | - Xiao-Long Zhu
- Department of Chemistry
- South University of Science and Technology of China
- Shenzhen
- P. R. China
| | - Yong-Zhou Hu
- Zhejiang Province Key Laboratory of Anti-Cancer Drug Research
- College of Pharmaceutical Sciences
- Zhejiang University
- Hangzhou
- P. R. China
| | - Xiao-Wu Dong
- Zhejiang Province Key Laboratory of Anti-Cancer Drug Research
- College of Pharmaceutical Sciences
- Zhejiang University
- Hangzhou
- P. R. China
| | - Bin Tan
- Department of Chemistry
- South University of Science and Technology of China
- Shenzhen
- P. R. China
| | - Xin-Yuan Liu
- Department of Chemistry
- South University of Science and Technology of China
- Shenzhen
- P. R. China
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50
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Li QM, Luo JG, Zhao HJ, Yu WY, Wang XB, Yang MH, Luo J, Sun HB, Chen YJ, Guo QL, Kong LY. Involudispirones A and B: Sesterterpenes Containing a Dispiro Ring fromStahlianthus involucratus. ASIAN J ORG CHEM 2015. [DOI: 10.1002/ajoc.201500360] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Qiang-Ming Li
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
| | - Jian-Guang Luo
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
| | - Hui-Jun Zhao
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
| | - Wen-Ying Yu
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
| | - Xiao-Bing Wang
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
| | - Ming-Hua Yang
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
| | - Jun Luo
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
| | - Hong-Bin Sun
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
| | - Yi-Jun Chen
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
| | - Qing-Long Guo
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
| | - Ling-Yi Kong
- State Key Laboratory of Natural Medicines; Department of Natural Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 People's Republic of China
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