1
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Lin RD, Xing X, Yu Y, Li WD, Chang DD, Tao FY, Wang N. Theoretical Analysis of Selectivity Differences in Ketoreductases toward Aldehyde and Ketone Carbonyl Groups. J Chem Inf Model 2024; 64:3400-3410. [PMID: 38537611 DOI: 10.1021/acs.jcim.3c01996] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/23/2024]
Abstract
Lactobacillus kefir alcohol dehydrogenase (LkADH) and ketoreductase from Chryseobacterium sp. CA49 (ChKRED12) exhibit different chemoselectivity and stereoselectivity toward a substrate with both keto and aldehyde carbonyl groups. LkADH selectively reduces the keto carbonyl group while retaining the aldehyde carbonyl group, producing optically pure R-alcohols. In contrast, ChKRED12 selectively reduces the aldehyde group and exhibits low reactivity toward ketone carbonyls. This study investigated the structural basis for these differences and the role of specific residues in the active site. Molecular dynamics (MD) simulations and quantum chemical calculations were used to investigate the interactions between the substrate and the enzymes and the essential cause of this phenomenon. The present study has revealed that LkADH and ChKRED12 exhibit significant differences in the structure of their respective active pockets, which is a crucial determinant of their distinct chemoselectivity toward the same substrate. Moreover, residues N89, N113, and E144 within LkADH as well as Q151 and D190 within ChKRED12 have been identified as key contributors to substrate stabilization within the active pocket through electrostatic interactions and van der Waals forces, followed by hydride transfer utilizing the coenzyme NADPH. Furthermore, the enantioselectivity mechanism of LkADH has been elucidated using quantum chemical methods. Overall, these findings not only provide fundamental insights into the underlying reasons for the observed differences in selectivity but also offer a detailed mechanistic understanding of the catalytic reaction.
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Affiliation(s)
- Ru-De Lin
- Key Laboratory of Green Chemistry & Technology, Ministry of Education, College of Chemistry, Sichuan University, Chengdu 610064, P. R. China
| | - Xiu Xing
- Key Laboratory of Green Chemistry & Technology, Ministry of Education, College of Chemistry, Sichuan University, Chengdu 610064, P. R. China
| | - Yuan Yu
- Key Laboratory of Green Chemistry & Technology, Ministry of Education, College of Chemistry, Sichuan University, Chengdu 610064, P. R. China
| | - Wen-Dian Li
- Harmful Components and Tar Reduction in Cigarette Key Laboratory of Sichuan Province, China Tobacco Sichuan Industrial Co., Ltd., Chengdu 610066, China
- Sichuan Sanlian New Material Co., Ltd., Chengdu 610041, China
| | - Dan-Dan Chang
- Harmful Components and Tar Reduction in Cigarette Key Laboratory of Sichuan Province, China Tobacco Sichuan Industrial Co., Ltd., Chengdu 610066, China
- Sichuan Sanlian New Material Co., Ltd., Chengdu 610041, China
| | - Fei-Yan Tao
- Harmful Components and Tar Reduction in Cigarette Key Laboratory of Sichuan Province, China Tobacco Sichuan Industrial Co., Ltd., Chengdu 610066, China
- Sichuan Sanlian New Material Co., Ltd., Chengdu 610041, China
| | - Na Wang
- Key Laboratory of Green Chemistry & Technology, Ministry of Education, College of Chemistry, Sichuan University, Chengdu 610064, P. R. China
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2
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Qing Y, Wu Q, He S, Zhang P, Xiong Y, Zhang Y, Huang F, Li F, Chen L. Effects of proton tunneling distance on CO 2 reduction by Mn terpyridine species. Dalton Trans 2023; 52:14309-14313. [PMID: 37779480 DOI: 10.1039/d3dt02081a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/03/2023]
Abstract
Herein, we report two manganese terpyridine dicarbonyl complexes, covalently attached to a proximal (1) or distal (2) amide moiety at the ortho position of the pendent phenyl ring as a proton relay. The isomer 1 achieves a turnover frequency (TOF) of 325 s-1 with a minor overpotential of ca. 200 mV. The performance ranks it among the most efficient molecular catalysts for CO2-to-CO conversion, and it is ca.2 orders faster than isomer 2.
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Affiliation(s)
- Yuhang Qing
- State Key Laboratory of Environment-Friendly Energy Materials, School of Materials and Chemistry, Southwest University of Science and Technology, Mianyang 621010, P. R. China.
| | - Qianqian Wu
- State Key Laboratory of Environment-Friendly Energy Materials, School of Materials and Chemistry, Southwest University of Science and Technology, Mianyang 621010, P. R. China.
| | - Shuanglin He
- State Key Laboratory of Environment-Friendly Energy Materials, School of Materials and Chemistry, Southwest University of Science and Technology, Mianyang 621010, P. R. China.
| | - Ping Zhang
- State Key Laboratory of Environment-Friendly Energy Materials, School of Materials and Chemistry, Southwest University of Science and Technology, Mianyang 621010, P. R. China.
| | - Ying Xiong
- State Key Laboratory of Environment-Friendly Energy Materials, School of Materials and Chemistry, Southwest University of Science and Technology, Mianyang 621010, P. R. China.
| | - Yaping Zhang
- State Key Laboratory of Environment-Friendly Energy Materials, School of Materials and Chemistry, Southwest University of Science and Technology, Mianyang 621010, P. R. China.
| | - Fang Huang
- College of Chemistry, Chemical Engineering and Materials Science, Shandong Normal University, Jinan 250014, P. R. China
| | - Fei Li
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian 116024, P. R. China
| | - Lin Chen
- State Key Laboratory of Environment-Friendly Energy Materials, School of Materials and Chemistry, Southwest University of Science and Technology, Mianyang 621010, P. R. China.
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3
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Liu T, Li G, Shen N, Wang L, Timmer BJJ, Kravchenko A, Zhou S, Gao Y, Yang Y, Yang H, Xu B, Zhang B, Ahlquist MSG, Sun L. Promoting Proton Transfer and Stabilizing Intermediates in Catalytic Water Oxidation via Hydrophobic Outer Sphere Interactions. Chemistry 2022; 28:e202104562. [PMID: 35289447 PMCID: PMC9314586 DOI: 10.1002/chem.202104562] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2021] [Indexed: 11/29/2022]
Abstract
The outer coordination sphere of metalloenzyme often plays an important role in its high catalytic activity, however, this principle is rarely considered in the design of man-made molecular catalysts. Herein, four Ru-bda (bda=2,2'-bipyridine-6,6'-dicarboxylate) based molecular water oxidation catalysts with well-defined outer spheres are designed and synthesized. Experimental and theoretical studies showed that the hydrophobic environment around the Ru center could lead to thermodynamic stabilization of the high-valent intermediates and kinetic acceleration of the proton transfer process during catalytic water oxidation. By this outer sphere stabilization, a 6-fold rate increase for water oxidation catalysis has been achieved.
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Affiliation(s)
- Tianqi Liu
- Department of ChemistrySchool of Engineering Sciences inChemistry Biotechnology and HealthKTH Royal Institute of Technology10044StockholmSweden
| | - Ge Li
- Department of Theoretical Chemistry & BiologySchool of Engineering Sciences in Chemistry Biotechnology and HealthKTH Royal Institute of Technology10691StockholmSweden
| | - Nannan Shen
- State Key Laboratory of Radiation Medicine and ProtectionSchool for Radiological and Interdisciplinary Sciences (RAD−X) andCollaborative Innovation Center of Radiation Medicine of Jiangsu Higher Education InstitutionsSoochow University215123SuzhouChina
| | - Linqin Wang
- Center of Artificial Photosynthesis for Solar FuelsSchool of ScienceWestlake University310024HangzhouChina
| | - Brian J. J. Timmer
- Department of ChemistrySchool of Engineering Sciences inChemistry Biotechnology and HealthKTH Royal Institute of Technology10044StockholmSweden
| | - Alexander Kravchenko
- Department of ChemistrySchool of Engineering Sciences inChemistry Biotechnology and HealthKTH Royal Institute of Technology10044StockholmSweden
| | - Shengyang Zhou
- Nanotechnology and Functional Materials, Department of Materials Sciences and EngineeringThe Ångström LaboratoryUppsala University751 03UppsalaSweden
| | - Ying Gao
- Wallenberg Wood Science CenterDepartment of Fiber and Polymer TechnologyKTH Royal Institute of TechnologyStockholm10044Sweden
| | - Yi Yang
- Department of ChemistrySchool of Engineering Sciences inChemistry Biotechnology and HealthKTH Royal Institute of Technology10044StockholmSweden
| | - Hao Yang
- Department of ChemistrySchool of Engineering Sciences inChemistry Biotechnology and HealthKTH Royal Institute of Technology10044StockholmSweden
| | - Bo Xu
- Department of ChemistrySchool of Engineering Sciences inChemistry Biotechnology and HealthKTH Royal Institute of Technology10044StockholmSweden
| | - Biaobiao Zhang
- Center of Artificial Photosynthesis for Solar FuelsSchool of ScienceWestlake University310024HangzhouChina
| | - Mårten S. G. Ahlquist
- Department of Theoretical Chemistry & BiologySchool of Engineering Sciences in Chemistry Biotechnology and HealthKTH Royal Institute of Technology10691StockholmSweden
| | - Licheng Sun
- Department of ChemistrySchool of Engineering Sciences inChemistry Biotechnology and HealthKTH Royal Institute of Technology10044StockholmSweden
- Center of Artificial Photosynthesis for Solar FuelsSchool of ScienceWestlake University310024HangzhouChina
- Institute of Artificial Photosynthesis (IAP)State Key Laboratory of Fine ChemicalsDalian University of Technology (DUT)Dalian116024China
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4
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Koronkiewicz B, Sayfutyarova ER, Coste SC, Mercado BQ, Hammes-Schiffer S, Mayer JM. Structural and Thermodynamic Effects on the Kinetics of C-H Oxidation by Multisite Proton-Coupled Electron Transfer in Fluorenyl Benzoates. J Org Chem 2022; 87:2997-3006. [PMID: 35113555 DOI: 10.1021/acs.joc.1c02834] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Our recent experimental and theoretical investigations have shown that fluorene C-H bonds can be activated through a mechanism in which the proton and electron are transferred from the C-H bond to a separate base and oxidant in a concerted, elementary step. This multisite proton-coupled electron transfer (MS-PCET) mechanism for C-H bond activation was shown to be facilitated by shorter proton donor-acceptor distances. With the goal of intentionally modulating this donor-acceptor distance, we have now studied C-H MS-PCET in the 3-methyl-substituted fluorenyl benzoate (2-Flr-3-Me-BzO-). This derivative was readily oxidized by ferrocenium oxidants by initial C-H MS-PCET, with rate constants that were 6-21 times larger than those for 2-Flr-BzO- with the same oxidants. Structural comparisons by X-ray crystallography and by computations showed that addition of the 3-methyl group caused the expected steric compression; however, the relevant C···O- proton donor-acceptor distance was longer, due to a twist of the carboxylate group. The structural changes induced by the 3-Me group increased the basicity of the carboxylate, weakened the C-H bond, and reduced the reorganization energy for C-H bond cleavage. Thus, the rate enhancement for 2-Flr-3-Me-BzO- was due to effects on the thermochemistry and kinetic barrier, rather than from compression of the C···O- proton donor-acceptor distance. These results highlight both the challenges of controlling molecules on the 0.1 Å length scale and the variety of parameters that affect PCET rate constants.
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Affiliation(s)
- Brian Koronkiewicz
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06511, United States
| | - Elvira R Sayfutyarova
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06511, United States
| | - Scott C Coste
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06511, United States
| | - Brandon Q Mercado
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06511, United States
| | - Sharon Hammes-Schiffer
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06511, United States
| | - James M Mayer
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06511, United States
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5
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Cotter L, Rimgard BP, Parada GA, Mayer JM, Hammarström L. Solvent and Temperature Effects on Photoinduced Proton-Coupled Electron Transfer in the Marcus Inverted Region. J Phys Chem A 2021; 125:7670-7684. [PMID: 34432465 PMCID: PMC8436208 DOI: 10.1021/acs.jpca.1c05764] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 08/09/2021] [Indexed: 11/29/2022]
Abstract
Concerted proton-coupled electron transfer (PCET) in the Marcus inverted region was recently demonstrated (Science 2019, 364, 471-475). Understanding the requirements for such reactivity is fundamentally important and holds promise as a design principle for solar energy conversion systems. Herein, we investigate the solvent polarity and temperature dependence of photoinduced proton-coupled charge separation (CS) and charge recombination (CR) in anthracene-phenol-pyridine triads: 1 (10-(4-hydroxy-3-(4-methylpyridin-2-yl)benzyl)anthracene-9-carbonitrile) and 2 (10-(4-hydroxy-3-(4-methoxypyridin-2-yl)benzyl)anthracene-9-carbonitrile). Both the CS and CR rate constants increased with increasing polarity in acetonitrile:n-butyronitrile mixtures. The kinetics were semi-quantitatively analyzed where changes in dielectric and refractive index, and thus consequently changes in driving force (-ΔG°) and reorganization energy (λ), were accounted for. The results were further validated by fitting the temperature dependence, from 180 to 298 K, in n-butyronitrile. The analyses support previous computational work where transitions to proton vibrational excited states dominate the CR reaction with a distinct activation free energy (ΔG*CR ∼ 140 meV). However, the solvent continuum model fails to accurately describe the changes in ΔG° and λ with temperature via changes in dielectric constant and refractive index. Satisfactory modeling was obtained using the results of a molecular solvent model [J. Phys. Chem. B 1999, 103, 9130-9140], which predicts that λ decreases with temperature, opposite to that of the continuum model. To further assess the solvent polarity control in the inverted region, the reactions were studied in toluene. Nonpolar solvents decrease both ΔG°CR and λ, slowing CR into the nanosecond time regime for 2 in toluene at 298 K. This demonstrates how PCET in the inverted region may be controlled to potentially use proton-coupled CS states for efficient solar fuel production and photoredox catalysis.
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Affiliation(s)
- Laura
F. Cotter
- Department
of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | | | - Giovanny A. Parada
- Department
of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - James M. Mayer
- Department
of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Leif Hammarström
- Department
of Chemistry − Ångström Laboratory, Uppsala University, Box 523, SE75120 Uppsala, Sweden
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6
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Natali M, Amati A, Demitri N, Iengo E. Photoinduced Electron vs. Concerted Proton Electron Transfer Pathways in Sn IV (l-Tryptophanato) 2 Porphyrin Conjugates. Chemistry 2021; 27:7872-7881. [PMID: 33780047 PMCID: PMC8252543 DOI: 10.1002/chem.202005487] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2020] [Indexed: 01/01/2023]
Abstract
Aromatic amino acids such as l‐tyrosine and l‐tryptophan are deployed in natural systems to mediate electron transfer (ET) reactions. While tyrosine oxidation is always coupled to deprotonation (proton‐coupled electron‐transfer, PCET), both ET‐only and PCET pathways can occur in the case of the tryptophan residue. In the present work, two novel conjugates 1 and 2, based on a SnIV tetraphenylporphyrin and SnIV octaethylporphyrin, respectively, as the chromophore/electron acceptor and l‐tryptophan as electron/proton donor, have been prepared and thoroughly characterized by a combination of different techniques including single crystal X‐ray analysis. The photophysical investigation of 1 and 2 in CH2Cl2 in the presence of pyrrolidine as a base shows that different quenching mechanisms are operating upon visible‐light excitation of the porphyrin component, namely photoinduced electron transfer and concerted proton electron transfer (CPET), depending on the chromophore identity and spin multiplicity of the excited state. The results are compared with those previously described for metal‐mediated analogues featuring SnIV porphyrin chromophores and l‐tyrosine as the redox active amino acid and well illustrate the peculiar role of l‐tryptophan with respect to PCET.
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Affiliation(s)
- Mirco Natali
- Department of Chemical, Pharmaceutical and Agricultural Sciences (DOCPAS), University of Ferrara, Via L. Borsari 46, 44121, Ferrara, Italy.,Centro Interuniversitario per la Conversione Chimica dell'Energia Solare (SolarChem), sez. di Ferrara, Via L. Borsari 46, 44121, Ferrara, Italy
| | - Agnese Amati
- Department of Chemical and Pharmaceutical Sciences, University of Trieste, Via L. Giorgieri 1, 34127, Trieste, Italy.,Current address: Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333CC, Leiden, The Netherlands
| | - Nicola Demitri
- Electra-Sincrotrone Trieste, S.S. 14 Km 163.5 in Area Science Park, 34149 Basovizza, Trieste, Italy
| | - Elisabetta Iengo
- Department of Chemical and Pharmaceutical Sciences, University of Trieste, Via L. Giorgieri 1, 34127, Trieste, Italy
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7
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Tyburski R, Liu T, Glover SD, Hammarström L. Proton-Coupled Electron Transfer Guidelines, Fair and Square. J Am Chem Soc 2021; 143:560-576. [PMID: 33405896 PMCID: PMC7880575 DOI: 10.1021/jacs.0c09106] [Citation(s) in RCA: 201] [Impact Index Per Article: 67.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Indexed: 12/23/2022]
Abstract
Proton-coupled electron transfer (PCET) reactions are fundamental to energy transformation reactions in natural and artificial systems and are increasingly recognized in areas such as catalysis and synthetic chemistry. The interdependence of proton and electron transfer brings a mechanistic richness of reactivity, including various sequential and concerted mechanisms. Delineating between different PCET mechanisms and understanding why a particular mechanism dominates are crucial for the design and optimization of reactions that use PCET. This Perspective provides practical guidelines for how to discern between sequential and concerted mechanisms based on interpretations of thermodynamic data with temperature-, pressure-, and isotope-dependent kinetics. We present new PCET-zone diagrams that show how a mechanism can switch or even be eliminated by varying the thermodynamic (ΔGPT° and ΔGET°) and coupling strengths for a PCET system. We discuss the appropriateness of asynchronous concerted PCET to rationalize observations in organic reactions, and the distinction between hydrogen atom transfer and other concerted PCET reactions. Contemporary issues and future prospects in PCET research are discussed.
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Affiliation(s)
- Robin Tyburski
- Ångström
Laboratory, Department of Chemistry, Uppsala
University, Box 523, SE75120 Uppsala, Sweden
| | - Tianfei Liu
- Department
of Chemistry, University of North Carolina
at Chapel Hill, Chapel
Hill, North Carolina 27599-3290, United States
| | - Starla D. Glover
- Ångström
Laboratory, Department of Chemistry, Uppsala
University, Box 523, SE75120 Uppsala, Sweden
| | - Leif Hammarström
- Ångström
Laboratory, Department of Chemistry, Uppsala
University, Box 523, SE75120 Uppsala, Sweden
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8
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Li P, Soudackov AV, Koronkiewicz B, Mayer JM, Hammes-Schiffer S. Theoretical Study of Shallow Distance Dependence of Proton-Coupled Electron Transfer in Oligoproline Peptides. J Am Chem Soc 2020; 142:13795-13804. [PMID: 32664731 DOI: 10.1021/jacs.0c04716] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Long-range electron transfer is coupled to proton transfer in a wide range of chemically and biologically important processes. Recently the proton-coupled electron transfer (PCET) rate constants for a series of biomimetic oligoproline peptides linking Ru(bpy)32+ to tyrosine were shown to exhibit a substantially shallower dependence on the number of proline spacers compared to the analogous electron transfer (ET) systems. The experiments implicated a concerted PCET mechanism involving intramolecular electron transfer from tyrosine to Ru(bpy)33+ and proton transfer from tyrosine to a hydrogen phosphate dianion. Herein these PCET systems, as well as the analogous ET systems, are studied with microsecond molecular dynamics, and the ET and PCET rate constants are calculated with the corresponding nonadiabatic theories. The molecular dynamics simulations illustrate that smaller ET donor-acceptor distances are sampled by the PCET systems than by the analogous ET systems. The shallower dependence of the PCET rate constant on the ET donor-acceptor distance is explained in terms of an additional positive, distance-dependent electrostatic term in the PCET driving force, which attenuates the rate constant at smaller distances. This electrostatic term depends on the change in the electrostatic interaction between the charges on each end of the bridge and can be modified by altering these charges. On the basis of these insights, this theory predicted a less shallow distance dependence of the PCET rate constant when imidazole rather than hydrogen phosphate serves as the proton acceptor, even though their pKa values are similar. This theoretical prediction was subsequently validated experimentally, illustrating that long-range electron transfer processes can be tuned by modifying the nature of the proton acceptor in concerted PCET processes. This level of control has broad implications for the design of more effective charge-transfer systems.
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Affiliation(s)
- Pengfei Li
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - Alexander V Soudackov
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - Brian Koronkiewicz
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - James M Mayer
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - Sharon Hammes-Schiffer
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
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9
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Odella E, Mora SJ, Wadsworth BL, Goings JJ, Gervaldo MA, Sereno LE, Groy TL, Gust D, Moore TA, Moore GF, Hammes-Schiffer S, Moore AL. Proton-coupled electron transfer across benzimidazole bridges in bioinspired proton wires. Chem Sci 2020; 11:3820-3828. [PMID: 34122850 PMCID: PMC8152432 DOI: 10.1039/c9sc06010c] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022] Open
Abstract
Designing molecular platforms for controlling proton and electron movement in artificial photosynthetic systems is crucial to efficient catalysis and solar energy conversion. The transfer of both protons and electrons during a reaction is known as proton-coupled electron transfer (PCET) and is used by nature in myriad ways to provide low overpotential pathways for redox reactions and redox leveling, as well as to generate bioenergetic proton currents. Herein, we describe theoretical and electrochemical studies of a series of bioinspired benzimidazole-phenol (BIP) derivatives and a series of dibenzimidazole-phenol (BI2P) analogs with each series bearing the same set of terminal proton-accepting (TPA) groups. The set of TPAs spans more than 6 pKa units. These compounds have been designed to explore the role of the bridging benzimidazole(s) in a one-electron oxidation process coupled to intramolecular proton translocation across either two (the BIP series) or three (the BI2P series) acid/base sites. These molecular constructs feature an electrochemically active phenol connected to the TPA group through a benzimidazole-based bridge, which together with the phenol and TPA group form a covalent framework supporting a Grotthuss-type hydrogen-bonded network. Infrared spectroelectrochemistry demonstrates that upon oxidation of the phenol, protons translocate across this well-defined hydrogen-bonded network to a TPA group. The experimental data show the benzimidazole bridges are non-innocent participants in the PCET process in that the addition of each benzimidazole unit lowers the redox potential of the phenoxyl radical/phenol couple by 60 mV, regardless of the nature of the TPA group. Using a series of hypothetical thermodynamic steps, density functional theory calculations correctly predicted the dependence of the redox potential of the phenoxyl radical/phenol couple on the nature of the final protonated species and provided insight into the thermodynamic role of dibenzimidazole units in the PCET process. This information is crucial for developing molecular “dry proton wires” with these moieties, which can transfer protons via a Grotthuss-type mechanism over long distances without the intervention of water molecules. Experimental and theoretical methods characterize the thermodynamics of electrochemically driven proton-coupled electron transfer processes in bioinspired constructs involving multiple proton translocations over Grotthus-type proton wires.![]()
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Affiliation(s)
- Emmanuel Odella
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | - S Jimena Mora
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | - Brian L Wadsworth
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | - Joshua J Goings
- Department of Chemistry, Yale University New Haven Connecticut 06520-8107 USA
| | - Miguel A Gervaldo
- Departamento de Química, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto Agencia Postal No 3 5800 Río Cuarto Córdoba Argentina
| | - Leonides E Sereno
- Departamento de Química, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto Agencia Postal No 3 5800 Río Cuarto Córdoba Argentina
| | - Thomas L Groy
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | - Devens Gust
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | - Thomas A Moore
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | - Gary F Moore
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
| | | | - Ana L Moore
- School of Molecular Sciences, Arizona State University Tempe Arizona 85287-1604 USA
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10
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A bio-inspired coordination polymer as outstanding water oxidation catalyst via second coordination sphere engineering. Nat Commun 2019; 10:5074. [PMID: 31699987 PMCID: PMC6838099 DOI: 10.1038/s41467-019-13052-1] [Citation(s) in RCA: 102] [Impact Index Per Article: 20.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Accepted: 10/17/2019] [Indexed: 11/12/2022] Open
Abstract
First-row transition metal-based catalysts have been developed for the oxygen evolution reaction (OER) during the past years, however, such catalysts typically operate at overpotentials (η) significantly above thermodynamic requirements. Here, we report an iron/nickel terephthalate coordination polymer on nickel form (NiFeCP/NF) as catalyst for OER, in which both coordinated and uncoordinated carboxylates were maintained after electrolysis. NiFeCP/NF exhibits outstanding electro-catalytic OER activity with a low overpotential of 188 mV at 10 mA cm−2 in 1.0 KOH, with a small Tafel slope and excellent stability. The pH-independent OER activity of NiFeCP/NF on the reversible hydrogen electrode scale suggests that a concerted proton-coupled electron transfer (c-PET) process is the rate-determining step (RDS) during water oxidation. Deuterium kinetic isotope effects, proton inventory studies and atom-proton-transfer measurements indicate that the uncoordinated carboxylates are serving as the proton transfer relays, with a similar function as amino acid residues in photosystem II (PSII), accelerating the proton-transfer rate. Proton-coupled electron transfer (PCET) process is very important for water oxidation catalysis. Here, the authors introduced uncoordinated carboxylate in the second-coordination-sphere of Ni-Fe coordination polymer catalyst as an internal base to promote the water oxidation kinetics by such PCET process.
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11
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Yee EF, Dzikovski B, Crane BR. Tuning Radical Relay Residues by Proton Management Rescues Protein Electron Hopping. J Am Chem Soc 2019; 141:17571-17587. [PMID: 31603693 DOI: 10.1021/jacs.9b05715] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
Transient tyrosine and tryptophan radicals play key roles in the electron transfer (ET) reactions of photosystem (PS) II, ribonucleotide reductase (RNR), photolyase, and many other proteins. However, Tyr and Trp are not functionally interchangeable, and the factors controlling their reactivity are often unclear. Cytochrome c peroxidase (CcP) employs a Trp191•+ radical to oxidize reduced cytochrome c (Cc). Although a Tyr191 replacement also forms a stable radical, it does not support rapid ET from Cc. Here we probe the redox properties of CcP Y191 by non-natural amino acid substitution, altering the ET driving force and manipulating the protic environment of Y191. Higher potential fluorotyrosine residues increase ET rates marginally, but only addition of a hydrogen bond donor to Tyr191• (via Leu232His or Glu) substantially alters activity by increasing the ET rate by nearly 30-fold. ESR and ESEEM spectroscopies, crystallography, and pH-dependent ET kinetics provide strong evidence for hydrogen bond formation to Y191• by His232/Glu232. Rate measurements and rapid freeze quench ESR spectroscopy further reveal differences in radical propagation and Cc oxidation that support an increased Y191• formal potential of ∼200 mV in the presence of E232. Hence, Y191 inactivity results from a potential drop owing to Y191•+ deprotonation. Incorporation of a well-positioned base to accept and donate back a hydrogen bond upshifts the Tyr• potential into a range where it can effectively oxidize Cc. These findings have implications for the YZ/YD radicals of PS II, hole-hopping in RNR and cryptochrome, and engineering proteins for long-range ET reactions.
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Affiliation(s)
- Estella F Yee
- Department of Chemistry and Chemical Biology , Cornell University , Ithaca , New York 14853 , United States
| | - Boris Dzikovski
- Department of Chemistry and Chemical Biology , Cornell University , Ithaca , New York 14853 , United States.,National Biomedical Center for Advanced ESR Technologies (ACERT) , Cornell University , Ithaca , New York 14850 , United States
| | - Brian R Crane
- Department of Chemistry and Chemical Biology , Cornell University , Ithaca , New York 14853 , United States
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12
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Darcy JW, Kolmar SS, Mayer JM. Transition State Asymmetry in C-H Bond Cleavage by Proton-Coupled Electron Transfer. J Am Chem Soc 2019; 141:10777-10787. [PMID: 31199137 DOI: 10.1021/jacs.9b04303] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The selective transformation of C-H bonds is a longstanding challenge in modern chemistry. A recent report details C-H oxidation via multiple-site concerted proton-electron transfer (MS-CPET), where the proton and electron in the C-H bond are transferred to separate sites. Reactivity at a specific C-H bond was achieved by appropriate positioning of an internal benzoate base. Here, we extend that report to reactions of a series of molecules with differently substituted fluorenyl-benzoates and varying outer-sphere oxidants. These results probe the fundamental rate versus driving force relationships in this MS-CPET reaction at carbon by separately modulating the driving force for the proton and electron transfer components. The rate constants depend strongly on the pKa of the internal base, but depend much less on the nature of the outer-sphere oxidant. These observations suggest that the transition states for these reactions are imbalanced. Density functional theory (DFT) was used to generate an internal reaction coordinate, which qualitatively reproduced the experimental observation of a transition state imbalance. Thus, in this system, homolytic C-H bond cleavage involves concerted but asynchronous transfer of the H+ and e-. The nature of this transfer has implications for synthetic methodology and biological systems.
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Affiliation(s)
- Julia W Darcy
- Department of Chemistry , Yale University , New Haven , Connecticut 06520-8107 , United States
| | - Scott S Kolmar
- Department of Chemistry , Yale University , New Haven , Connecticut 06520-8107 , United States
| | - James M Mayer
- Department of Chemistry , Yale University , New Haven , Connecticut 06520-8107 , United States
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13
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Zhan S, De Gracia Triviño JA, Ahlquist MSG. The Carboxylate Ligand as an Oxide Relay in Catalytic Water Oxidation. J Am Chem Soc 2019; 141:10247-10252. [DOI: 10.1021/jacs.9b02585] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Shaoqi Zhan
- Department of Theoretical Chemistry & Biology, School of Engineering Sciences in Chemistry Biotechnology and Health, KTH Royal Institute of Technology, 10691 Stockholm, Sweden
| | - Juan Angel De Gracia Triviño
- Department of Theoretical Chemistry & Biology, School of Engineering Sciences in Chemistry Biotechnology and Health, KTH Royal Institute of Technology, 10691 Stockholm, Sweden
| | - Mårten S. G. Ahlquist
- Department of Theoretical Chemistry & Biology, School of Engineering Sciences in Chemistry Biotechnology and Health, KTH Royal Institute of Technology, 10691 Stockholm, Sweden
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14
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Parada GA, Goldsmith ZK, Kolmar S, Pettersson Rimgard B, Mercado BQ, Hammarström L, Hammes-Schiffer S, Mayer JM. Concerted proton-electron transfer reactions in the Marcus inverted region. Science 2019; 364:471-475. [PMID: 30975771 PMCID: PMC6681808 DOI: 10.1126/science.aaw4675] [Citation(s) in RCA: 78] [Impact Index Per Article: 15.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Accepted: 03/28/2019] [Indexed: 11/02/2022]
Abstract
Electron transfer reactions slow down when they become very thermodynamically favorable, a counterintuitive interplay of kinetics and thermodynamics termed the inverted region in Marcus theory. Here we report inverted region behavior for proton-coupled electron transfer (PCET). Photochemical studies of anthracene-phenol-pyridine triads give rate constants for PCET charge recombination that are slower for the more thermodynamically favorable reactions. Photoexcitation forms an anthracene excited state that undergoes PCET to create a charge-separated state. The rate constants for return charge recombination show an inverted dependence on the driving force upon changing pyridine substituents and the solvent. Calculations using vibronically nonadiabatic PCET theory yield rate constants for simultaneous tunneling of the electron and proton that account for the results.
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Affiliation(s)
| | | | - Scott Kolmar
- Department of Chemistry, Yale University, New Haven, CT, USA
| | | | | | - Leif Hammarström
- Department of Chemistry - Ångström Laboratory, Uppsala University, Uppsala, Sweden.
| | | | - James M Mayer
- Department of Chemistry, Yale University, New Haven, CT, USA.
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15
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Chang MC, Jesse KA, Filatov AS, Anderson JS. Reversible homolytic activation of water via metal-ligand cooperativity in a T-shaped Ni(ii) complex. Chem Sci 2019; 10:1360-1367. [PMID: 30809351 PMCID: PMC6354739 DOI: 10.1039/c8sc03719a] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2018] [Accepted: 11/05/2018] [Indexed: 12/18/2022] Open
Abstract
A T-shaped Ni(ii) complex [Tol,PhDHPy]Ni has been prepared and characterized. EPR spectra and DFT calculations of this complex suggest that the electronic structure is best described as a high-spin Ni(ii) center antiferromagnetically coupled with a ligand-based radical. This complex reacts with water at room temperature to generate the dimeric complex [Tol,PhDHPy]Ni(μ-OH)Ni[Tol,PhDHPyH] which has been thoroughly characterized by SXRD, NMR, IR and deuterium-labeling experiments. Addition of simple ligands such as phosphines or pyridine displaces water and demonstrates the reversibility of water activation in this system. The water activation step has been examined by kinetic studies and DFT calculations which suggest an unusual homolytic reaction via a bimetallic mechanism. The ΔH ‡, ΔS ‡ and KIE (k H/k D) of the reaction are 5.5 kcal mol-1, -23.8 cal mol-1 K-1, and 2.4(1), respectively. In addition to the reversibility of water addition, this system is capable of activating water towards net O-atom transfer to substrates such as aromatic C-H bonds and phosphines. This reactivity is facilitated by the ability of the dihydrazonopyrrole ligand to accept H-atoms and illustrates the utility of metal ligand cooperation in activating O-H bonds with high bond dissociation energies.
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Affiliation(s)
- Mu-Chieh Chang
- Department of Chemistry , The University of Chicago , Chicago , Illinois 60637 , USA .
| | - Kate A Jesse
- Department of Chemistry , The University of Chicago , Chicago , Illinois 60637 , USA .
| | - Alexander S Filatov
- Department of Chemistry , The University of Chicago , Chicago , Illinois 60637 , USA .
| | - John S Anderson
- Department of Chemistry , The University of Chicago , Chicago , Illinois 60637 , USA .
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16
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Ilic S, Alherz A, Musgrave CB, Glusac KD. Importance of proton-coupled electron transfer in cathodic regeneration of organic hydrides. Chem Commun (Camb) 2019; 55:5583-5586. [DOI: 10.1039/c9cc00928k] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
This communication reports a combined experimental and computational study of mechanisms by which biomimetic NADH analogs can be electrochemically regenerated.
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Affiliation(s)
- Stefan Ilic
- Department of Chemistry
- University of Illinois at Chicago
- Chicago
- USA
- Chemical Sciences and Engineering Division
| | - Abdulaziz Alherz
- Department of Chemical and Biological Engineering
- University of Colorado
- Boulder
- USA
| | - Charles B. Musgrave
- Department of Chemical and Biological Engineering
- University of Colorado
- Boulder
- USA
- Department of Chemistry
| | - Ksenija D. Glusac
- Department of Chemistry
- University of Illinois at Chicago
- Chicago
- USA
- Chemical Sciences and Engineering Division
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17
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Pannwitz A, Wenger OS. Recent advances in bioinspired proton-coupled electron transfer. Dalton Trans 2019; 48:5861-5868. [DOI: 10.1039/c8dt04373f] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Fundamental aspects of PCET continue to attract attention. Understanding this reaction type is desirable for small-molecule activation and solar energy conversion.
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Affiliation(s)
- Andrea Pannwitz
- Department of Chemistry
- University of Basel
- 4056 Basel
- Switzerland
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18
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Cinar ME, Lal M, Deiseroth HJ, Schlirf J, Schmittel M. Detection and follow-up reactions of distonic β
, β
-dimesityl enol radical cations containing nitrogen heterocyclic bases. J PHYS ORG CHEM 2018. [DOI: 10.1002/poc.3865] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- M. Emin Cinar
- Department Chemie-Biologie; Universität Siegen; Siegen Germany
| | - Mukul Lal
- Department Chemie-Biologie; Universität Siegen; Siegen Germany
| | | | - Jens Schlirf
- Department Chemie-Biologie; Universität Siegen; Siegen Germany
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19
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Darcy JW, Koronkiewicz B, Parada GA, Mayer JM. A Continuum of Proton-Coupled Electron Transfer Reactivity. Acc Chem Res 2018; 51:2391-2399. [PMID: 30234963 DOI: 10.1021/acs.accounts.8b00319] [Citation(s) in RCA: 173] [Impact Index Per Article: 28.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Proton-coupled electron transfer (PCET) covers a wide range of reactions involving the transfer(s) of electrons and protons. The best-known PCET reaction, hydrogen atom transfer (HAT), has been studied in detail for more than a century. HAT is generally described as the concerted transfer of a hydrogen atom (H• ≡ H+ + e-) from one group to another, Y + H-X → Y-H + X, but a strict definition of HAT has been difficult to establish. Distinctions are more challenging when the transfer of "H•" involves e- and H+ that transfer to/from spatially distinct sites or even completely separate reagents (multiple-site concerted proton-electron transfer, MS-CPET). MS-CPET reactivity is increasingly proposed in biological and synthetic contexts, and some reactions typically described as HAT more resemble MS-CPET. Despite that HAT and MS-CPET reactions "look different," we argue here that these reactions lie on a reactivity continuum, and that they are governed by many of the same key parameters. This Account walks the reader across this PCET reactivity continuum, using a series of studies to show the strong similarities of reactions that move protons and electrons in seemingly different ways. To prepare for our stroll, we describe the thermochemical and kinetic frameworks for HAT and MS-CPET. The driving force for a solution HAT reaction is most easily discussed as the difference in the bond dissociation free energies (BDFEs) of the reactants and products. BDFEs can be analyzed as sums of electron and proton transfer steps and can therefore be obtained from p Ka and E° values. Even though MS-CPET reactions do not make and break H-X bonds in the same way as HAT, the same thermochemical description can be used with the introduction of an effective BDFE (BDFEeff). The BDFEeff of a reductant/acid pair is the free energy of that pair to form H•, which can be obtained from p Ka and E° values in an analogous fashion to a standard BDFE. When the PCET thermochemistry is known, HAT and PCET rate constants can be understood and often predicted using linear free energy relationships (the Brønsted catalysis law) and Marcus theory type approaches. After this background, we walk the reader through a continuum of PCET reactivity. Our journey begins with a study of metal-mediated HAT from hydrocarbon substrates to a metal-oxo complex and travels to the MS-CPET end of the reactivity spectrum, involving the transfer of H+ and e- from the hydroxylamine TEMPOH to two completely separate molecules. These examples, and those in between, are all analyzed within the same thermodynamic and kinetic framework. A description of the first examples of MS-CPET with C-H bonds uses the same framework and highlights the importance of hydrogen bonding and preorganization. The examples and analyses show that the reactions along the PCET continuum are more similar than they are different, and that attempts to divide these reactions into subcategories can obscure much of the essential chemistry. We hope that developing the many common features of these reactions will help experts and newcomers alike to explore exciting new territories in PCET reactivity.
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Affiliation(s)
- Julia W. Darcy
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Brian Koronkiewicz
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Giovanny A. Parada
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
| | - James M. Mayer
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
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20
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Accelerating proton-coupled electron transfer of metal hydrides in catalyst model reactions. Nat Chem 2018; 10:881-887. [DOI: 10.1038/s41557-018-0076-x] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2017] [Accepted: 04/27/2018] [Indexed: 12/19/2022]
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21
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Bowring MA, Bradshaw LR, Parada GA, Pollock TP, Fernández-Terán RJ, Kolmar SS, Mercado BQ, Schlenker CW, Gamelin DR, Mayer JM. Activationless Multiple-Site Concerted Proton-Electron Tunneling. J Am Chem Soc 2018; 140:7449-7452. [PMID: 29847111 PMCID: PMC6310214 DOI: 10.1021/jacs.8b04455] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The transfer of protons and electrons is key to energy conversion and storage, from photosynthesis to fuel cells. Increased understanding and control of these processes are needed. A new anthracene-phenol-pyridine molecular triad was designed to undergo fast photoinduced multiple-site concerted proton-electron transfer (MS-CPET), with the phenol moiety transferring an electron to the photoexcited anthracene and a proton to the pyridine. Fluorescence quenching and transient absorption experiments in solutions and glasses show rapid MS-CPET (3.2 × 1010 s-1 at 298 K). From 5.5 to 90 K, the reaction rate and kinetic isotope effect (KIE) are independent of temperature, with zero Arrhenius activation energy. From 145 to 350 K, there are only slight changes with temperature. This MS-CPET reaction thus occurs by tunneling of both the proton and electron, in different directions. Since the reaction proceeds without significant thermal activation energy, the rate constant indicates the magnitude of the electron/proton double tunneling probability.
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Affiliation(s)
- Miriam A. Bowring
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
- Department of Chemistry, Reed College, Portland, Oregon 97202, United States
| | - Liam R. Bradshaw
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Giovanny A. Parada
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Timothy P. Pollock
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | | | - Scott S. Kolmar
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Brandon Q. Mercado
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Cody W. Schlenker
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Daniel R. Gamelin
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - James M. Mayer
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
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22
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Morris WD, Mayer JM. Separating Proton and Electron Transfer Effects in Three-Component Concerted Proton-Coupled Electron Transfer Reactions. J Am Chem Soc 2017; 139:10312-10319. [PMID: 28671470 DOI: 10.1021/jacs.7b03562] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Multiple-site concerted proton-electron transfer (MS-CPET) reactions were studied in a three-component system. 1-Hydroxy-2,2,6,6-tetramethylpiperidine (TEMPOH) was oxidized to the stable radical TEMPO by electron transfer to ferrocenium oxidants coupled to proton transfer to various pyridine bases. These MS-CPET reactions contrast with the usual reactivity of TEMPOH by hydrogen atom transfer (HAT) to a single e-/H+ acceptor. The three-component reactions proceed by pre-equilibrium formation of a hydrogen-bonded adduct between TEMPOH and the pyridine base, and the adduct is then oxidized by the ferrocenium in a bimolecular MS-CPET step. The second-order rate constants, measured using stopped-flow kinetic techniques, spanned 4 orders of magnitude. An advantage of this system is that the MS-CPET driving force could be independently varied by changing either the pKa of the base or the reduction potential (E°) of the oxidant. Changes in ΔG°MS-CPET from either source had the same effect on the MS-CPET rate constants, and a combined Brønsted plot of ln(kMS-CPET) vs ln(Keq) was linear with a slope of 0.46. These results imply a synchronous concerted mechanism, in which the proton and electron transfer components of the CPET process make equal contributions to the rate constants. The only outliers to the Brønsted correlation are the reactions with sterically hindered pyridines, which apparently hinder the close approach of proton donor and acceptor that facilitates MS-CPET. These three-component reactions are compared with a related HAT reaction of TEMPOH, with the 2,4,6-tri-tert-butylphenoxyl radical. The MS-CPET and HAT oxidations of TEMPOH at the same driving force occurred with similar rate constants. While this is an imperfect comparison, the data suggest that the separation of the proton and electron to different reagents does not significantly inhibit the proton-coupled electron transfer process.
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Affiliation(s)
- Wesley D Morris
- Department of Chemistry, Yale University , New Haven, Connecticut 06511, United States
| | - James M Mayer
- Department of Chemistry, Yale University , New Haven, Connecticut 06511, United States
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23
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Fang H, Gao Y, Wang H, Yin H, Li G, An T. Photo-induced oxidative damage to dissolved free amino acids by the photosensitizer polycyclic musk tonalide: Transformation kinetics and mechanisms. WATER RESEARCH 2017; 115:339-346. [PMID: 28288313 DOI: 10.1016/j.watres.2017.03.006] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2016] [Revised: 03/03/2017] [Accepted: 03/04/2017] [Indexed: 06/06/2023]
Abstract
Residue from the polycyclic musks (PCMs) in household and personal care products may harm human beings through skin exposure. To understand the health effects of PCMs when exposed to sunlight at molecular level, both experimental and computational methods were employed to investigate the photosensitized oxidation performance of 19 natural amino acids, the most basic unit of life. Results showed that a typical PCM, tonalide, acts as a photosensitizer to significantly increase photo-induced oxidative damage to amino acids. Both common and exceptional transformation pathways occurred during the photosensitization damage of amino acids. Experimental tests further identified the different mechanisms involved. The common transformation pathway occurred through the electron transfer from α amino-group of amino acids, accompanying with the formation of O2•-. This pathway was controlled by the electronic density of N atom in α amino-group. The exceptional transformation pathway was identified only for five amino acids, mainly due to the reactions with reactive oxygen species, e.g. 1O2 and excited triplet state molecules. Additionally, tonalide photo-induced transformation products could further accelerate the photosensitization of all amino acids with the common pathway. This study may support the protection of human health, and suggests the possible need to further restrict polycyclic musks use.
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Affiliation(s)
- Hansun Fang
- State Key Laboratory of Organic Geochemistry and Guangdong Key Laboratory of Environmental Resources Utilization and Protection, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, 510640, China
| | - Yanpeng Gao
- Guangzhou Key Laboratory of Environmental Catalysis and Pollution Control, School of Environmental Science and Engineering, Institute of Environmental Health and Pollution Control, Guangdong University of Technology, Guangzhou, 510006, China
| | - Honghong Wang
- State Key Laboratory of Organic Geochemistry and Guangdong Key Laboratory of Environmental Resources Utilization and Protection, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, 510640, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Hongliang Yin
- Guangzhou Key Laboratory of Environmental Catalysis and Pollution Control, School of Environmental Science and Engineering, Institute of Environmental Health and Pollution Control, Guangdong University of Technology, Guangzhou, 510006, China
| | - Guiying Li
- Guangzhou Key Laboratory of Environmental Catalysis and Pollution Control, School of Environmental Science and Engineering, Institute of Environmental Health and Pollution Control, Guangdong University of Technology, Guangzhou, 510006, China
| | - Taicheng An
- State Key Laboratory of Organic Geochemistry and Guangdong Key Laboratory of Environmental Resources Utilization and Protection, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, 510640, China; Guangzhou Key Laboratory of Environmental Catalysis and Pollution Control, School of Environmental Science and Engineering, Institute of Environmental Health and Pollution Control, Guangdong University of Technology, Guangzhou, 510006, China.
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24
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Amorati R, Valgimigli L, Viglianisi C, Schmallegger M, Neshchadin D, Gescheidt G. Proton-Coupled Electron Transfer from Hydrogen-Bonded Phenols to Benzophenone Triplets. Chemistry 2017; 23:5299-5306. [DOI: 10.1002/chem.201605931] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2016] [Indexed: 01/15/2023]
Affiliation(s)
- Riccardo Amorati
- University of Bologna; Department of Chemistry “G. Ciamician”; Via S. Giacomo 11 40126 Bologna Italy
| | - Luca Valgimigli
- University of Bologna; Department of Chemistry “G. Ciamician”; Via S. Giacomo 11 40126 Bologna Italy
| | - Caterina Viglianisi
- Department of Chemistry “Ugo Schiff”; University of Florence; Via della Lastruccia 3-13 50019 Sesto Fiorentino Italy
| | - Max Schmallegger
- Institute of Physical and Theoretical Chemistry; Graz University of Technology, NAWI Graz; Stremayrgasse 9 8010 Graz Austria
| | - Dmytro Neshchadin
- Institute of Physical and Theoretical Chemistry; Graz University of Technology, NAWI Graz; Stremayrgasse 9 8010 Graz Austria
| | - Georg Gescheidt
- Institute of Physical and Theoretical Chemistry; Graz University of Technology, NAWI Graz; Stremayrgasse 9 8010 Graz Austria
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25
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Uraguchi D, Torii M, Ooi T. Acridinium Betaine as a Single-Electron-Transfer Catalyst: Design and Application to Dimerization of Oxindoles. ACS Catal 2017. [DOI: 10.1021/acscatal.7b00265] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Daisuke Uraguchi
- Institute
of Transformative Bio-Molecules (WPI-ITbM) and Department of Applied
Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8601, Japan
| | - Masahiro Torii
- Institute
of Transformative Bio-Molecules (WPI-ITbM) and Department of Applied
Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8601, Japan
| | - Takashi Ooi
- Institute
of Transformative Bio-Molecules (WPI-ITbM) and Department of Applied
Chemistry, Graduate School of Engineering, Nagoya University, Nagoya 464-8601, Japan
- CREST,
Japan Science and Technology Agency (JST), Nagoya University, Nagoya 464-8601, Japan
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26
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Glover SD, Parada GA, Markle TF, Ott S, Hammarström L. Isolating the Effects of the Proton Tunneling Distance on Proton-Coupled Electron Transfer in a Series of Homologous Tyrosine-Base Model Compounds. J Am Chem Soc 2017; 139:2090-2101. [DOI: 10.1021/jacs.6b12531] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Starla D. Glover
- Department of Chemistry−Ångström, Uppsala University, Box
532, SE-751 20, Uppsala, Sweden
| | - Giovanny A. Parada
- Department of Chemistry−Ångström, Uppsala University, Box
532, SE-751 20, Uppsala, Sweden
| | - Todd F. Markle
- Department of Chemistry−Ångström, Uppsala University, Box
532, SE-751 20, Uppsala, Sweden
| | - Sascha Ott
- Department of Chemistry−Ångström, Uppsala University, Box
532, SE-751 20, Uppsala, Sweden
| | - Leif Hammarström
- Department of Chemistry−Ångström, Uppsala University, Box
532, SE-751 20, Uppsala, Sweden
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27
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Manbeck GF, Fujita E, Concepcion JJ. Proton-Coupled Electron Transfer in a Strongly Coupled Photosystem II-Inspired Chromophore–Imidazole–Phenol Complex: Stepwise Oxidation and Concerted Reduction. J Am Chem Soc 2016; 138:11536-49. [DOI: 10.1021/jacs.6b03506] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Gerald F. Manbeck
- Chemistry Division, Brookhaven National Laboratory, Upton, New York 11973-5000, United States
| | - Etsuko Fujita
- Chemistry Division, Brookhaven National Laboratory, Upton, New York 11973-5000, United States
| | - Javier J. Concepcion
- Chemistry Division, Brookhaven National Laboratory, Upton, New York 11973-5000, United States
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28
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Markle TF, Zhang MT, Santoni MP, Johannissen LO, Hammarström L. Proton-Coupled Electron Transfer in a Series of Ruthenium-Linked Tyrosines with Internal Bases: Evaluation of a Tunneling Model for Experimental Temperature-Dependent Kinetics. J Phys Chem B 2016; 120:9308-21. [DOI: 10.1021/acs.jpcb.6b05885] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Todd F. Markle
- Department of Chemistry − Ångström
Laboratory, Uppsala University, P.O. Box 523, S-75120 Uppsala, Sweden
| | - Ming-Tian Zhang
- Department of Chemistry − Ångström
Laboratory, Uppsala University, P.O. Box 523, S-75120 Uppsala, Sweden
| | - Marie-Pierre Santoni
- Department of Chemistry − Ångström
Laboratory, Uppsala University, P.O. Box 523, S-75120 Uppsala, Sweden
| | - Linus O. Johannissen
- Department of Chemistry − Ångström
Laboratory, Uppsala University, P.O. Box 523, S-75120 Uppsala, Sweden
| | - Leif Hammarström
- Department of Chemistry − Ångström
Laboratory, Uppsala University, P.O. Box 523, S-75120 Uppsala, Sweden
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29
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Eisenhart TT, Howland WC, Dempsey JL. Proton-Coupled Electron Transfer Reactions with Photometric Bases Reveal Free Energy Relationships for Proton Transfer. J Phys Chem B 2016; 120:7896-905. [DOI: 10.1021/acs.jpcb.6b04011] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Thomas T. Eisenhart
- Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina 27599-3290, United States
| | - William C. Howland
- Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina 27599-3290, United States
| | - Jillian L. Dempsey
- Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina 27599-3290, United States
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30
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Parada GA, Glover SD, Orthaber A, Hammarström L, Ott S. Hydrogen Bonded Phenol-Quinolines with Highly Controlled Proton-Transfer Coordinate. European J Org Chem 2016. [DOI: 10.1002/ejoc.201600460] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Giovanny A. Parada
- Department of Chemistry Ångström Laboratories; Uppsala University; Box 523 75120 Uppsala Sweden
| | - Starla D. Glover
- Department of Chemistry Ångström Laboratories; Uppsala University; Box 523 75120 Uppsala Sweden
| | - Andreas Orthaber
- Department of Chemistry Ångström Laboratories; Uppsala University; Box 523 75120 Uppsala Sweden
| | - Leif Hammarström
- Department of Chemistry Ångström Laboratories; Uppsala University; Box 523 75120 Uppsala Sweden
| | - Sascha Ott
- Department of Chemistry Ångström Laboratories; Uppsala University; Box 523 75120 Uppsala Sweden
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31
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Kodama K, Hayashi N, Yoshida Y, Hirose T. Direct enantioseparation of diarylmethylamines with an ortho-hydroxy group via diastereomeric salt formation and their application to the enantioselective addition reaction of diethylzinc. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.01.034] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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32
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Jackson MN, Surendranath Y. Donor-Dependent Kinetics of Interfacial Proton-Coupled Electron Transfer. J Am Chem Soc 2016; 138:3228-34. [PMID: 26862666 DOI: 10.1021/jacs.6b00167] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The effect of the proton donor on the kinetics of interfacial concerted proton-electron transfer (CPET) to polycrystalline Au was probed indirectly by studying the rate of hydrogen evolution from trialkylammonium donors with different steric profiles, but the same pKa. Detailed kinetic studies point to a mechanism for HER catalysis that involves rate-limiting CPET from the proton donor to the electrode surface, allowing this catalytic reaction to serve as a proxy for the rate of interfacial CPET. In acetonitrile electrolyte, triethylammonium (TEAH(+)) displays up to 20-fold faster CPET kinetics than diisopropylethylammonium (DIPEAH(+)) at all measured potentials. In aqueous electrolyte, this steric constraint is largely lifted, suggesting a key role for water in mediating interfacial CPET. In acetonitrile, TEAH(+) also displays a much larger transfer coefficient (β = 0.7) than DIPEAH(+) (β = 0.4), and TEAH(+) displays a potential-dependent H/D kinetic isotope effect that is not observed for DIPEAH(+). These results demonstrate that proton donor structure strongly impacts the free energy landscape for CPET to extended solid surfaces and highlight the crucial role of the proton donor in the kinetics of electrocatalytic energy conversion reactions.
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Affiliation(s)
- Megan N Jackson
- Department of Chemistry, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States
| | - Yogesh Surendranath
- Department of Chemistry, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States
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33
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Pagba CV, McCaslin TG, Chi SH, Perry JW, Barry BA. Proton-Coupled Electron Transfer and a Tyrosine-Histidine Pair in a Photosystem II-Inspired β-Hairpin Maquette: Kinetics on the Picosecond Time Scale. J Phys Chem B 2016; 120:1259-72. [PMID: 26886811 DOI: 10.1021/acs.jpcb.6b00560] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Photosystem II (PSII) and ribonucleotide reductase employ oxidation and reduction of the tyrosine aromatic ring in radical transport pathways. Tyrosine-based reactions involve either proton-coupled electron transfer (PCET) or electron transfer (ET) alone, depending on the pH and the pKa of tyrosine's phenolic oxygen. In PSII, a subset of the PCET reactions are mediated by a tyrosine-histidine redox-driven proton relay, YD-His189. Peptide A is a PSII-inspired β-hairpin, which contains a single tyrosine (Y5) and histidine (H14). Previous electrochemical characterization indicated that Peptide A conducts a net PCET reaction between Y5 and H14, which have a cross-strand π-π interaction. The kinetic impact of H14 has not yet been explored. Here, we address this question through time-resolved absorption spectroscopy and 280-nm photolysis, which generates a neutral tyrosyl radical. The formation and decay of the neutral tyrosyl radical at 410 nm were monitored in Peptide A and its variant, Peptide C, in which H14 is replaced by cyclohexylalanine (Cha14). Significantly, both electron transfer (ET, pL 11, L = lyonium) and PCET (pL 9) were accelerated in Peptide A and C, compared to model tyrosinate or tyrosine at the same pL. Increased electronic coupling, mediated by the peptide backbone, can account for this rate acceleration. Deuterium exchange gave no significant solvent isotope effect in the peptides. At pL 9, but not at pL 11, the reaction rate decreased when H14 was mutated to Cha14. This decrease in rate is attributed to an increase in reorganization energy in the Cha14 mutant. The Y5-H14 mechanism in Peptide A is reminiscent of proton- and electron-transfer events involving YD-H189 in PSII. These results document a mechanism by which proton donors and acceptors can regulate the rate of PCET reactions.
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Affiliation(s)
- Cynthia V Pagba
- School of Chemistry and Biochemistry, the Petit Institute for Bioengineering and Bioscience, and the ‡Center for Organic Photonics and Electronics, Georgia Institute of Technology , Atlanta, Georgia 30332, United States
| | - Tyler G McCaslin
- School of Chemistry and Biochemistry, the Petit Institute for Bioengineering and Bioscience, and the ‡Center for Organic Photonics and Electronics, Georgia Institute of Technology , Atlanta, Georgia 30332, United States
| | - San-Hui Chi
- School of Chemistry and Biochemistry, the Petit Institute for Bioengineering and Bioscience, and the ‡Center for Organic Photonics and Electronics, Georgia Institute of Technology , Atlanta, Georgia 30332, United States
| | - Joseph W Perry
- School of Chemistry and Biochemistry, the Petit Institute for Bioengineering and Bioscience, and the ‡Center for Organic Photonics and Electronics, Georgia Institute of Technology , Atlanta, Georgia 30332, United States
| | - Bridgette A Barry
- School of Chemistry and Biochemistry, the Petit Institute for Bioengineering and Bioscience, and the ‡Center for Organic Photonics and Electronics, Georgia Institute of Technology , Atlanta, Georgia 30332, United States
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34
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Bourrez M, Gloaguen F. Electrochemical and Computational Study of the Reactivity of a Diiron Azadithiolate Complex towards Protons in the Presence of Coordinating Anions. Eur J Inorg Chem 2015. [DOI: 10.1002/ejic.201500675] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Marc Bourrez
- UMR 6521, CNRS, Université de Bretagne Occidentale, CS 93837 Brest, France, http://www.umr6521.cnrs.fr/
| | - Frederic Gloaguen
- UMR 6521, CNRS, Université de Bretagne Occidentale, CS 93837 Brest, France, http://www.umr6521.cnrs.fr/
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35
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Kretchmer JS, Miller TF. Tipping the Balance between Concerted versus Sequential Proton-Coupled Electron Transfer. Inorg Chem 2015; 55:1022-31. [PMID: 26440812 DOI: 10.1021/acs.inorgchem.5b01821] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Joshua S. Kretchmer
- Department of Chemistry and Chemical
Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Thomas F. Miller
- Department of Chemistry and Chemical
Engineering, California Institute of Technology, Pasadena, California 91125, United States
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36
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Koo BJ, Huynh M, Halbach RL, Stubbe J, Nocera DG. Modulation of Phenol Oxidation in Cofacial Dyads. J Am Chem Soc 2015; 137:11860-3. [PMID: 26305909 DOI: 10.1021/jacs.5b05955] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The presentation of two phenols on a xanthene backbone is akin to the tyrosine dyad (Y730 and Y731) of ribonucleotide reductase. X-ray crystallography reveals that the two phenol moieties are cofacially disposed at 4.35 Å. Cyclic voltammetry reveals that phenol oxidation is modulated within the dyad, which exhibits a splitting of one-electron waves with the second oxidation of the phenol dyad occurring at larger positive potential than that of a typical phenol. In contrast, a single phenol appended to a xanthene exhibits a two-electron process, consistent with reported oxidation pathways of phenols in acetonitrile. The perturbation of the phenol potential by stacking is reminiscent of a similar effect for guanines stacked within DNA base pairs.
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Affiliation(s)
- Bon Jun Koo
- Department of Chemistry and Chemical Biology, Harvard University , 12 Oxford Street, Cambridge, Massachusetts 02138, United States
| | - Michael Huynh
- Department of Chemistry and Chemical Biology, Harvard University , 12 Oxford Street, Cambridge, Massachusetts 02138, United States
| | - Robert L Halbach
- Department of Chemistry and Chemical Biology, Harvard University , 12 Oxford Street, Cambridge, Massachusetts 02138, United States
| | - JoAnne Stubbe
- Department of Chemistry, Massachusetts Institute of Technology , 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Daniel G Nocera
- Department of Chemistry and Chemical Biology, Harvard University , 12 Oxford Street, Cambridge, Massachusetts 02138, United States
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37
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Welker EA, Tiley BL, Sasaran CM, Zuchero MA, Tong WS, Vettleson MJ, Richards RA, Geruntho JG, Stoll S, Wolbach JP, Rhile IJ. Conformational Change with Steric Interactions Affects the Inner Sphere Component of Concerted Proton-Electron Transfer in a Pyridyl-Appended Radical Cation System. J Org Chem 2015; 80:8705-12. [PMID: 26270193 PMCID: PMC10758225 DOI: 10.1021/acs.joc.5b01427] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Proton-coupled electron transfer (PCET) model systems combine one-electron oxidants and bases to generate net hydrogen atom acceptors. We have generated two persistent pyridyl-appended radical cations: 10-(pyrid-2-yl)-10H-phenothiazinium (PPT•+) and 3-(pyrid-2-yl)-10-methyl-10H-phenothiazinium (MPTP•+). EPR spectra and corresponding calculations indicate phenothiazinium radical cations with minimal spin on the pyridine nitrogen. Addition of hindered phenols causes the radical cations to decay, and protonated products and the corresponding phenoxyl radicals to form. The ΔG° values for the formation of intermediates (determined through cyclic voltammetry and pKa measurements) rule out a stepwise mechanism, and kinetic isotope effects support concerted proton–electron transfer (CPET) as the mechanism. Calculations indicate that the reaction of PPT•+ + tBu3PhOH undergoes a significant conformational change with steric interactions on the diabatic surface while maintaining the hydrogen bond; in contrast, MPTP•+ + tBu3PhOH maintains its conformation throughout the reaction. This difference is reflected in both experiment and calculations with ΔG(⧧)MPTP•+ < ΔG(⧧)PPT•+ despite ΔG°MPTP•+ > ΔG°PPT•+. Experimental results with 2,6-di-tert-butyl-4-methoxyphenol are similar. Hence, despite the structural similarity between the compounds, differences in the inner sphere component for CPET affect the kinetics.
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Affiliation(s)
- Evan A. Welker
- Department of Chemistry and Biochemistry, Albright College, Reading, PA 19610-5234, United States
| | - Brittney L. Tiley
- Department of Chemistry and Biochemistry, Albright College, Reading, PA 19610-5234, United States
| | - Crina M. Sasaran
- Department of Chemistry and Biochemistry, Albright College, Reading, PA 19610-5234, United States
| | - Matthew A. Zuchero
- Department of Chemistry and Biochemistry, Albright College, Reading, PA 19610-5234, United States
| | - Wing-Sze Tong
- Department of Chemistry and Biochemistry, Albright College, Reading, PA 19610-5234, United States
| | - Melissa J. Vettleson
- Department of Chemistry and Biochemistry, Albright College, Reading, PA 19610-5234, United States
| | - Robert A. Richards
- Department of Chemistry and Biochemistry, Albright College, Reading, PA 19610-5234, United States
| | - Jonathan G. Geruntho
- Department of Chemistry and Biochemistry, Albright College, Reading, PA 19610-5234, United States
| | - Stefan Stoll
- Department of Chemistry, University of Washington, Seattle, WA 98195-1700, United States
| | | | - Ian J. Rhile
- Department of Chemistry and Biochemistry, Albright College, Reading, PA 19610-5234, United States
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38
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Alcázar L, Bogdándi V, Lente G, Martínez M, Vázquez M. Temperature- and pressure-dependent kinetico-mechanistic studies on the formation of mixed-valence {(tetraamine)CoIIINCFeII(CN)5}− units. J COORD CHEM 2015. [DOI: 10.1080/00958972.2015.1074190] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Laura Alcázar
- Departament de Química Inorgànica, Universitat de Barcelona, Barcelona, Spain
| | - Virág Bogdándi
- Department of Inorganic and Analytical Chemistry, University of Debrecen, Debrecen, Hungary
| | - Gábor Lente
- Department of Inorganic and Analytical Chemistry, University of Debrecen, Debrecen, Hungary
| | - Manuel Martínez
- Departament de Química Inorgànica, Universitat de Barcelona, Barcelona, Spain
| | - Marta Vázquez
- Departament de Química Inorgànica, Universitat de Barcelona, Barcelona, Spain
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39
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Hammes-Schiffer S. Proton-Coupled Electron Transfer: Moving Together and Charging Forward. J Am Chem Soc 2015; 137:8860-71. [PMID: 26110700 PMCID: PMC4601483 DOI: 10.1021/jacs.5b04087] [Citation(s) in RCA: 291] [Impact Index Per Article: 32.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2015] [Indexed: 12/24/2022]
Abstract
Proton-coupled electron transfer (PCET) is ubiquitous throughout chemistry and biology. This Perspective discusses recent advances and current challenges in the field of PCET, with an emphasis on the role of theory and computation. The fundamental theoretical concepts are summarized, and expressions for rate constants and kinetic isotope effects are provided. Computational methods for calculating reduction potentials and pKa's for molecular electrocatalysts, as well as insights into linear correlations and non-innocent ligands, are also described. In addition, computational methods for simulating the nonadiabatic dynamics of photoexcited PCET are discussed. Representative applications to PCET in solution, proteins, electrochemistry, and photoinduced processes are presented, highlighting the interplay between theoretical and experimental studies. The current challenges and suggested future directions are outlined for each type of application, concluding with an overall view to the future.
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Affiliation(s)
- Sharon Hammes-Schiffer
- Department of Chemistry, University of
Illinois at Urbana−Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801, United
States
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40
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Liu Y, Liu H, Song K, Xu Y, Shi Q. Theoretical Study of Proton Coupled Electron Transfer Reactions: The Effect of Hydrogen Bond Bending Motion. J Phys Chem B 2015; 119:8104-14. [DOI: 10.1021/acs.jpcb.5b02927] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Yang Liu
- Beijing
National Laboratory
for Molecular Sciences, State Key Laboratory for Structural Chemistry
of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, China
| | - Hao Liu
- Beijing
National Laboratory
for Molecular Sciences, State Key Laboratory for Structural Chemistry
of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, China
| | - Kai Song
- Beijing
National Laboratory
for Molecular Sciences, State Key Laboratory for Structural Chemistry
of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, China
| | - Yang Xu
- Beijing
National Laboratory
for Molecular Sciences, State Key Laboratory for Structural Chemistry
of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, China
| | - Qiang Shi
- Beijing
National Laboratory
for Molecular Sciences, State Key Laboratory for Structural Chemistry
of Unstable and Stable Species, Institute of Chemistry, Chinese Academy of Sciences, Zhongguancun, Beijing 100190, China
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41
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Bourrez M, Steinmetz R, Ott S, Gloaguen F, Hammarström L. Concerted proton-coupled electron transfer from a metal-hydride complex. Nat Chem 2015; 7:140-5. [PMID: 25615667 DOI: 10.1038/nchem.2157] [Citation(s) in RCA: 74] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2014] [Accepted: 12/08/2014] [Indexed: 11/09/2022]
Abstract
Metal hydrides are key intermediates in the catalytic reduction of protons and CO2 as well as in the oxidation of H2. In these reactions, electrons and protons are transferred to or from separate acceptors or donors in bidirectional protoncoupled electron transfer (PCET) steps. The mechanistic interpretation of PCET reactions of metal hydrides has focused on the stepwise transfer of electrons and protons. A concerted transfer may, however, occur with a lower reaction barrier and therefore proceed at higher catalytic rates. Here we investigate the feasibility of such a reaction by studying the oxidation–deprotonation reactions of a tungsten hydride complex. The rate dependence on the driving force for both electron transfer and proton transfer—employing different combinations of oxidants and bases—was used to establish experimentally the concerted, bidirectional PCET of a metal-hydride species. Consideration of the findings presented here in future catalyst designs may lead to more-efficient catalysts.
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Affiliation(s)
- Marc Bourrez
- UMR 6521, Centre National de la Recherche Scientifique, Université de Bretagne Occidentale, 6 Avenue Le Gorgeu, 29238 Brest, France
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42
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Abstract
An enormous variety of biological redox reactions are accompanied by changes in proton content at enzyme active sites, in their associated cofactors, in substrates and/or products, and between protein interfaces. Understanding this breadth of reactivity is an ongoing chemical challenge. A great many workers have developed and investigated biomimetic model complexes to build new ways of thinking about the mechanistic underpinnings of such complex biological proton-coupled electron transfer (PCET) reactions. Of particular importance are those model reactions that involve transfer of one proton (H(+)) and one electron (e(-)), which is equivalent to transfer of a hydrogen atom (H(•)). In this Current Topic, we review key concepts in PCET reactivity and describe important advances in biomimetic PCET chemistry, with a special emphasis on research that has enhanced efforts to understand biological PCET reactions.
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Affiliation(s)
- Jeffrey J. Warren
- Simon Fraser University, Department of Chemistry, 8888 University Drive, Burnaby BC, Canada V5A 1S6
| | - James M. Mayer
- Yale University, Department of Chemistry, P.O. Box 208107, 225 Prospect Street, New Haven, CT 06520-8107
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43
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Nomrowski J, Wenger OS. Photoinduced PCET in ruthenium-phenol systems: thermodynamic equivalence of uni- and bidirectional reactions. Inorg Chem 2015; 54:3680-7. [PMID: 25781364 DOI: 10.1021/acs.inorgchem.5b00318] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Six termolecular reaction systems comprised of Ru(4,4′-bis(trifluoromethyl)-2,2′-bipyridine)32+, phenols with different para substituents, and pyridine in acetonitrile undergo proton-coupled electron transfer (PCET) upon photoexcitation of the metal complex. Five of these six phenols are found to release in concerted fashion an electron to the ruthenium photooxidant and a proton to the pyridine base. The kinetics for this concerted bidirectional PCET process and its relationship to the reaction free energy were compared to the driving-force dependence of reaction kinetics for unidirectional concerted proton–electron transfer (CPET) between the same phenols and Ru(2,2′-bipyrazine)32+, a combined electron/proton acceptor. The results strongly support the concept of thermodynamic equivalence between separated electron/proton acceptors and single-reagent hydrogen-atom acceptors. A key feature of the explored systems is the similarity between molecules employed for bi- and unidirectional CPET.
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Affiliation(s)
- Julia Nomrowski
- Department of Chemistry, University of Basel, St. Johanns-Ring 19, CH-4056 Basel, Switzerland
| | - Oliver S Wenger
- Department of Chemistry, University of Basel, St. Johanns-Ring 19, CH-4056 Basel, Switzerland
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44
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Proton-coupled electron transfer with photoexcited ruthenium(II), rhenium(I), and iridium(III) complexes. Coord Chem Rev 2015. [DOI: 10.1016/j.ccr.2014.03.025] [Citation(s) in RCA: 66] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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45
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Trefz T, Kabir MK, Jain R, Patrick BO, Hicks RG. Unconventional redox properties of hydroquinones with intramolecular OH−N hydrogen bonds. CAN J CHEM 2014. [DOI: 10.1139/cjc-2014-0175] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
The redox (chemical and electrochemical) properties of several hydroquinones are reported in which the OH protons are engaged in intramolecular hydrogen bonds to a nitrogen-based acceptor (pyridine or amine). The 1,4-hydroquinones generally undergo reversible oxidation to quinones in which both OH protons have transferred to the pendant bases; the oxidation processes are generally chemically and electrochemically reversible, in stark contrast with normal hydroquinones, which are oxidized irreversibly (via proton loss) to quinones. The oxidation processes, believed to occur in concerted proton/electron transfer steps, are at much lower potentials for the hydrogen-bonded derivatives relative to unsubstituted derivatives. In contrast, isomeric 1,3-hydroquinones (resorcinols) are oxidized irreversibly at relatively high potentials. The stability of some of the 1,4-hydroquinone oxidized species permits their isolation and characterization both spectroscopically and structurally. Somewhat surprisingly, in the oxidized species in which the proton is now located on the nitrogen base, the characterization data indicate that there is no NH−O hydrogen bond. Relationships between the particulars of the redox properties of the hydroquinones (potentials, reversibility/stability) and molecular structure are discussed.
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Affiliation(s)
- Tyler Trefz
- Department of Chemistry, University of Victoria, P.O. Box 3065 STN CSC, Victoria, BC V8W 3V6, Canada
| | - Md. Khayrul Kabir
- Department of Chemistry, University of Victoria, P.O. Box 3065 STN CSC, Victoria, BC V8W 3V6, Canada
| | - Rajsapan Jain
- Department of Chemistry, University of Victoria, P.O. Box 3065 STN CSC, Victoria, BC V8W 3V6, Canada
| | - Brian O. Patrick
- Crystallography Laboratory, Department of Chemistry, University of British Columbia, Vancouver, BC V6T 1Z1, Canada
| | - Robin G. Hicks
- Department of Chemistry, University of Victoria, P.O. Box 3065 STN CSC, Victoria, BC V8W 3V6, Canada
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46
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An T, Fang H, Li G, Wang S, Yao S. Experimental and theoretical insights into photochemical transformation kinetics and mechanisms of aqueous propylparaben and risk assessment of its degradation products. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 2014; 33:1809-1816. [PMID: 24796535 DOI: 10.1002/etc.2632] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2014] [Revised: 04/04/2014] [Accepted: 04/29/2014] [Indexed: 06/03/2023]
Abstract
The kinetics and mechanisms of ultraviolet photochemical transformation of propylparaben (PPB) were studied. Specific kinetics scavenging experiments coupled with quantum yield determinations were used to distinguish the roles of various reactive species induced by self-sensitized and direct photolysis reactions, and the excited triplet state of PPB ((3) PPB*) was identified as the most important species to initiate the photochemical degradation of PPB in aquatic environments. The computational results of time-resolved absorption spectra proved that (3) PPB* is a highly reactive electron acceptor, and a head-to-tail hydrogen transfer mechanism probably occurs through electron coupled with proton transfer. Physical quenching by, or chemical reaction of (3) PPB* with, O2 was confirmed as a key step affecting the initial PPB transformation pathways and degradation mechanisms. The transformation products were identified and the toxicity evolutions of PPB solutions during photochemical degradation under aerobic and anaerobic conditions were compared. The results indicate that anaerobic conditions are more likely than aerobic conditions to lead to the elimination and detoxification of PPB but less likely to lead to PPB mineralization.
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Affiliation(s)
- Taicheng An
- State Key Laboratory of Organic Geochemistry and Guangdong Key Laboratory of Environmental Resources Utilization and Protection, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, People's Republic of China
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47
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Chen J, Kuss-Petermann M, Wenger OS. Dependence of Reaction Rates for Bidirectional PCET on the Electron Donor–Electron Acceptor Distance in Phenol–Ru(2,2′-Bipyridine)32+ Dyads. J Phys Chem B 2014; 119:2263-73. [DOI: 10.1021/jp506087t] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jing Chen
- Department of Chemistry, University of Basel, St. Johanns-Ring
19, CH-4056 Basel, Switzerland
| | - Martin Kuss-Petermann
- Department of Chemistry, University of Basel, St. Johanns-Ring
19, CH-4056 Basel, Switzerland
| | - Oliver S. Wenger
- Department of Chemistry, University of Basel, St. Johanns-Ring
19, CH-4056 Basel, Switzerland
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48
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Savéant JM, Tard C. Proton-Coupled Electron Transfer in Azobenzene/Hydrazobenzene Couples with Pendant Acid–Base Functions. Hydrogen-Bonding and Structural Effects. J Am Chem Soc 2014; 136:8907-10. [DOI: 10.1021/ja504484a] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Jean-Michel Savéant
- Laboratoire d’Electrochimie
Moléculaire, UMR 7591, CNRS, Université Paris Diderot, Sorbonne Paris Cité, 15 rue Jean-Antoine de Baïf, F-75205 Paris Cedex 13, France
| | - Cédric Tard
- Laboratoire d’Electrochimie
Moléculaire, UMR 7591, CNRS, Université Paris Diderot, Sorbonne Paris Cité, 15 rue Jean-Antoine de Baïf, F-75205 Paris Cedex 13, France
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Salamone M, Amorati R, Menichetti S, Viglianisi C, Bietti M. Structural and Medium Effects on the Reactions of the Cumyloxyl Radical with Intramolecular Hydrogen Bonded Phenols. The Interplay Between Hydrogen-Bonding and Acid-Base Interactions on the Hydrogen Atom Transfer Reactivity and Selectivity. J Org Chem 2014; 79:6196-205. [DOI: 10.1021/jo5009367] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Michela Salamone
- Dipartimento di Scienze e Tecnologie Chimiche, Università “Tor Vergata”, Via della Ricerca Scientifica, 1, I-00133 Rome, Italy
| | - Riccardo Amorati
- Dipartimento di Chimica “G.
Ciamician”, Università di Bologna, Via San Giacomo,
11, I-40126 Bologna, Italy
| | - Stefano Menichetti
- Dipartimento di
Chimica “U. Schiff”, Università di Firenze, Via della
Lastruccia, 3-13, I-50019 Sesto Fiorentino, Italy
| | - Caterina Viglianisi
- Dipartimento di
Chimica “U. Schiff”, Università di Firenze, Via della
Lastruccia, 3-13, I-50019 Sesto Fiorentino, Italy
| | - Massimo Bietti
- Dipartimento di Scienze e Tecnologie Chimiche, Università “Tor Vergata”, Via della Ricerca Scientifica, 1, I-00133 Rome, Italy
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50
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Bang S, Park S, Lee YM, Hong S, Cho KB, Nam W. Demonstration of the Heterolytic OO Bond Cleavage of Putative Nonheme Iron(II)OOH(R) Complexes for Fenton and Enzymatic Reactions. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201404556] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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