1
|
Zhao H, Sun Z. Higher-Order Split Operator Schemes for Solving Tetratomic Reactions Using the Time-Dependent Wave Packet Method. J Phys Chem A 2024; 128:4911-4922. [PMID: 38847623 DOI: 10.1021/acs.jpca.4c01802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
In this work, using the time-dependent quantum wave packet method, quite a few typical higher-order split operators (HOSOs) were for the first time applied to calculate the tetratomic reactive scattering processes in the hyperspherical coordinate. It was found that the HOSOs were hardly efficient for a tetratomic reaction calculation, unlike those for a triatomic reactive scattering calculation. We proposed an efficient HOSO with a force gradient (denoted as 2G1 in the main text) for efficiently and accurately calculating a tetratomic reaction using the quantum wave packet method. Several typical tetratomic reactions, such as H2 + OH, HF + OH, and H2 + OH+, are calculated for demonstrating the effectiveness of the proposed 2G1 in terms of (product state-resolved) reaction probability and inelastic probability, by comparing with the performance of the previously reported various HOSOs. We suggest that the 2G1 propagator could be applied to efficiently calculate a general tetratomic reaction.
Collapse
Affiliation(s)
- Hailin Zhao
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, P.R. China
| | - Zhigang Sun
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, P.R. China
| |
Collapse
|
2
|
Czakó G, Gruber B, Papp D, Tajti V, Tasi DA, Yin C. First-principles mode-specific reaction dynamics. Phys Chem Chem Phys 2024; 26:15818-15830. [PMID: 38639072 DOI: 10.1039/d4cp00417e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/20/2024]
Abstract
Controlling the outcome of chemical reactions by exciting specific vibrational and/or rotational modes of the reactants is one of the major goals of modern reaction dynamics studies. In the present Perspective, we focus on first-principles vibrational and rotational mode-specific dynamics computations on reactions of neutral and anionic systems beyond six atoms such as X + C2H6 [X = F, Cl, OH], HX + C2H5 [X = Br, I], OH- + CH3I, and F- + CH3CH2Cl. The dynamics simulations utilize high-level ab initio analytical potential energy surfaces and the quasi-classical trajectory method. Besides initial state specificity and the validity of the Polanyi rules, mode-specific vibrational-state assignment for polyatomic product species using normal-mode analysis and Gaussian binning is also discussed and compared with experiment.
Collapse
Affiliation(s)
- Gábor Czakó
- MTA-SZTE Lendület Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary.
| | - Balázs Gruber
- MTA-SZTE Lendület Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary.
| | - Dóra Papp
- MTA-SZTE Lendület Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary.
| | - Viktor Tajti
- MTA-SZTE Lendület Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary.
| | - Domonkos A Tasi
- MTA-SZTE Lendület Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary.
| | - Cangtao Yin
- MTA-SZTE Lendület Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary.
| |
Collapse
|
3
|
Bernard ME, Harrison I. Microcanonical treatment of HCl dissociative chemisorption on Au(111): Reactive dampening through inefficient translational energy coupling and an active surface. J Chem Phys 2024; 160:084702. [PMID: 38391017 DOI: 10.1063/5.0193675] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Accepted: 02/02/2024] [Indexed: 02/24/2024] Open
Abstract
Microcanonical unimolecular rate theory is applied to Shirhatti and Wodtke's recent supersonic molecular beam experiments examining the activated dissociative chemisorption of HCl on Au(111). A precursor mediated microcanonical trapping (PMMT) model (where the surface vibrates and HCl rotations, vibration, and translation directed along the surface normal are treated as active degrees of freedom) gave dissociative sticking coefficient predictions that are several orders of magnitude higher than experimental values but in good accord with prior quantum and molecular dynamics simulations. Density functional theory (DFT) electronic structure calculations using the Perdew-Burke-Ernzerhof (PBE) functional served to fix the vibrational frequencies of the reactive transition state and the threshold energy for dissociation, E0 = 72.9 kJ/mol. To explore the possibilities of varying threshold energy, coupling to phonons, and dynamics, a three-parameter [E0, s, ɛn] dynamically biased (d-) PMMT model was fit to the experiments. A dynamical bias was introduced using an efficiency, ɛn, of normal translational energy to contribute to the active exchangeable energy capable of promoting reactivity. To achieve the low sticking probabilities observed in experiment, severe normal translational energy dampening (ɛn → 0.26) was imposed, leading to a large vibrational efficacy of ηv = εv/εn = 3.85. The optimal threshold energy for dissociation was E0 = 30.88 kJ/mol, some 40 kJ/mol below the PBE-DFT prediction, and the optimal number of Au surface oscillators was s = 1. The d-PMMT modeling indicates that HCl/Au(111) reactivity can be consistent with electronically adiabatic passage across a relatively low and late transition state that dynamically disfavors normal translational energy.
Collapse
Affiliation(s)
- Mark E Bernard
- Department of Chemistry, University of Virgina, Charlottesville, Virginia 22904, USA
| | - Ian Harrison
- Department of Chemistry, University of Virgina, Charlottesville, Virginia 22904, USA
| |
Collapse
|
4
|
Gruber B, Tajti V, Czakó G. Vibrational Mode-Specific Dynamics of the OH + C 2H 6 Reaction. J Phys Chem A 2023; 127:7364-7372. [PMID: 37620310 PMCID: PMC10493966 DOI: 10.1021/acs.jpca.3c04328] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 08/04/2023] [Indexed: 08/26/2023]
Abstract
We investigate the effects of the initial vibrational excitations on the dynamics of the OH + C2H6 → H2O + C2H5 reaction using the quasi-classical trajectory method and a full-dimensional analytical ab initio potential energy surface. Excitation of the initial CH, CC, and OH stretching modes enhances, slightly inhibits, and does not affect the reactivity, respectively. Translational energy activates the early-barrier title reaction more efficiently than OH and CC stretching excitations, in accord with the Polanyi rules whereas CH stretching modes have similar or higher efficacy than translation, showing that these rules are not always valid in polyatomic processes. Scattering angle, initial attack angle, and product translational energy distributions show the dominance of direct stripping with increasing collision energy, side-on OH and isotropic C2H6 attack preferences, and substantial reactant-product translational energy transfer without any significant mode specificity. The reactant vibrational excitation energy of OH and C2H6 flows into the H2O and C2H5 product vibrations, respectively, whereas product rotations are not affected. The computed mode-specific H2O vibrational distributions show that initial OH excitation appears in the asymmetric stretching vibration of the H2O product and allow comparison with experiments.
Collapse
Affiliation(s)
- Balázs Gruber
- MTA-SZTE Lendület Computational
Reaction Dynamics Research Group, Interdisciplinary Excellence Centre
and Department of Physical Chemistry and Materials Science, Institute
of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary
| | - Viktor Tajti
- MTA-SZTE Lendület Computational
Reaction Dynamics Research Group, Interdisciplinary Excellence Centre
and Department of Physical Chemistry and Materials Science, Institute
of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary
| | - Gábor Czakó
- MTA-SZTE Lendület Computational
Reaction Dynamics Research Group, Interdisciplinary Excellence Centre
and Department of Physical Chemistry and Materials Science, Institute
of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary
| |
Collapse
|
5
|
Liu Y, Li J. Permutation-Invariant-Polynomial Neural-Network-Based Δ-Machine Learning Approach: A Case for the HO 2 Self-Reaction and Its Dynamics Study. J Phys Chem Lett 2022; 13:4729-4738. [PMID: 35609295 DOI: 10.1021/acs.jpclett.2c01064] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Δ-machine learning, or the hierarchical construction scheme, is a highly cost-effective method, as only a small number of high-level ab initio energies are required to improve a potential energy surface (PES) fit to a large number of low-level points. However, there is no efficient and systematic way to select as few points as possible from the low-level data set. We here propose a permutation-invariant-polynomial neural-network (PIP-NN)-based Δ-machine learning approach to construct full-dimensional accurate PESs of complicated reactions efficiently. Particularly, the high flexibility of the NN is exploited to efficiently sample points from the low-level data set. This approach is applied to the challenging case of a HO2 self-reaction with a large configuration space. Only 14% of the DFT data set is used to successfully bring a newly fitted DFT PES to the UCCSD(T)-F12a/AVTZ quality. Then, the quasiclassical trajectory (QCT) calculations are performed to study its dynamics, particularly the mode specificity.
Collapse
Affiliation(s)
- Yang Liu
- School of Chemistry and Chemical Engineering & Chongqing Key Laboratory of Theoretical and Computational Chemistry, Chongqing University, Chongqing 401331, China
| | - Jun Li
- School of Chemistry and Chemical Engineering & Chongqing Key Laboratory of Theoretical and Computational Chemistry, Chongqing University, Chongqing 401331, China
| |
Collapse
|
6
|
Abstract
We perform rotational mode-specific quasi-classical trajectory simulations using a high-quality ab initio analytical potential energy surface for the Cl(2P3/2) + C2H6 → HCl + C2H5 reaction. As ethane, being a prolate-type symmetric top, can be characterized by the J and K rotational quantum numbers, the excitation of two rotational modes, the tumbling (J, K = 0) and spinning (J, K = J) rotations of the reactant is carried out with J = 10, 20, 30, and 40 at a wide range of collision energies. The impacts of rotational excitation on the reactivity, the mechanism, and the post-reaction distribution of energy are investigated: (1) exciting both rotational modes enhances the reactivity with the spinning rotation being more effective due to its coupling to the C-H stretching vibrational normal modes (C-H bond elongating effect) and larger rotational energies, (2) rotational excitation increases the dominance of direct rebound over the stripping mechanism, while collision energy favors the latter, (3) investing energy in tumbling rotation excites the translational motion of the products, while the excess spinning rotational energy readily flows into the internal degrees of freedom of the ethyl radical or, less significantly, into the HCl vibration, probably due to the pronounced rovibrational coupling in this case. We also study the relative efficiency of vibrational and rotational excitation on the reactivity of the barrierless and thus translationally hindered title reaction.
Collapse
Affiliation(s)
- Dóra Papp
- MTA-SZTE Lendület Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary
| | - Gábor Czakó
- MTA-SZTE Lendület Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary
| |
Collapse
|
7
|
Tajti V, Czakó G. Vibrational mode-specific dynamics of the F - + CH 3CH 2Cl multi-channel reaction. Phys Chem Chem Phys 2022; 24:8166-8181. [PMID: 35343535 DOI: 10.1039/d2cp00685e] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We investigate the mode-specific dynamics of the ground-state, C-Cl stretching (v10), CH2 wagging (v7), sym-CH2 stretching (v1), and sym-CH3 stretching (v3) excited F- + CH3CH2Cl(vk = 0, 1) [k = 10, 7, 1, 3] → Cl- + CH3CH2F (SN2), HF + CH3CHCl-, FH⋯Cl- + C2H4, and Cl- + HF + C2H4 (E2) reactions using a full-dimensional high-level analytical global potential energy surface and the quasi-classical trajectory method. Excitation of the C-Cl stretching, CH2 stretching, and CH2/CH3 stretching modes enhances the SN2, proton abstraction, and FH⋯Cl- and E2 channels, respectively. Anti-E2 dominates over syn-E2 (kinetic anti-E2 preference) and the thermodynamically-favored SN2 (wider reactive anti-E2 attack angle range). The direct (a) SN2, (b) proton abstraction, (c) FH⋯Cl- + C2H4, (d) syn-E2, and (e) anti-E2 channels proceed with (a) back-side/backward, (b) isotropic/forward, (c) side-on/forward, (d) front-side/forward, and (e) back-side/forward attack/scattering, respectively. The HF products are vibrationally cold, especially for proton abstraction, and their rotational excitation increases for proton abstraction, anti-E2, and syn-E2, in order. Product internal-energy and mode-specific vibrational distributions show that CH3CH2F is internally hot with significant C-F stretching and CH2 wagging excitations, whereas C2H4 is colder. One-dimensional Gaussian binning technique is proved to solve the normal mode analysis failure caused by methyl internal rotation.
Collapse
Affiliation(s)
- Viktor Tajti
- MTA-SZTE Lendület Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary.
| | - Gábor Czakó
- MTA-SZTE Lendület Computational Reaction Dynamics Research Group, Interdisciplinary Excellence Centre and Department of Physical Chemistry and Materials Science, Institute of Chemistry, University of Szeged, Rerrich Béla tér 1, Szeged H-6720, Hungary.
| |
Collapse
|
8
|
Theoretical Description of Water from Single-Molecule to Condensed Phase: a Review of Recent Progress on Potential Energy Surfaces and Molecular Dynamics. CHINESE J CHEM PHYS 2022. [DOI: 10.1063/1674-0068/cjcp2201005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
|
9
|
Mode Specificity Dynamics of the Prototypical Multi-Channel H+CH 3OH Reaction on a Globally Accurate Potential Energy Surface. CHINESE J CHEM PHYS 2022. [DOI: 10.1063/1674-0068/cjcp2201018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
|
10
|
Product Vibrational State Distributions of the F CH 3OH Reaction on a Full-Dimensional Accurate Potential Energy Surface. CHINESE J CHEM PHYS 2022. [DOI: 10.1063/1674-0068/cjcp2111252] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
|
11
|
Liu S, Zhang X, Chen J, Zhang DH. Feshbach Resonances in the Vibrationally Excited F + HOD( vOH/ vOD = 1) Reaction Due to Chemical Bond Softening. J Phys Chem Lett 2021; 12:6090-6094. [PMID: 34170706 DOI: 10.1021/acs.jpclett.1c01586] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Experiments and theories showed the ground-state reaction F + H2O → HF + OH possesses Feshbach resonances trapped in the hydrogen bond well in the product region. However, it is not clear whether F + H2O and its isotopic analogues have the same Feshbach resonances caused by chemical bond softening as those in the F + H2/HD. Here, we reported state-to-state quantum dynamics studies of the F + HOD(vOH = 1) → HF + OD and F + HOD(vOD = 1) → DF + OH reactions on an accurate neural network potential energy surface. Detailed analysis reveals that the course of the title reactions is dominated by the Feshbach resonance states trapped in the peculiar HF(v'=3)-OD/DF(v'=4)-OH vibrationally adiabatic potential well created by the HF/DF bond softening, which can only be accessed via the HOD(vOH = 1)/HOD(vOD = 1) reaction pathway. Therefore, we confirm the wide existence of chemical bond softening resonances in reactions involving vibrationally excited molecules.
Collapse
Affiliation(s)
- Shu Liu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Xiaoren Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jun Chen
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, China
| | - Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| |
Collapse
|
12
|
Zhang X, Zhang Z, Gatti F, Zhang DH. Full-dimensional quantum dynamics study of isotope effects for the H 2 + NH 2/ND 2/NHD and H 2/D 2/HD + NH 2 reactions. J Chem Phys 2021; 154:074301. [PMID: 33607900 DOI: 10.1063/5.0040002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
A full-dimensional quantum dynamical study for the bimolecular reactions of hydrogen molecules with amino radicals for different isotopologues is reported. The nonreactive amino radical is described by two Radau vectors that are very close to the valence bond coordinates. Potential-optimized discrete variable representation basis is used for the vibrational coordinates of the amino radical. Starting from the reaction H2 + NH2, we study the isotope effects for the two reagents separately, i.e., H2 + NH2/ND2/NHD and H2/D2/HD + NH2. The effects of different vibrational mode excitations of the reagents on the reactivities are studied. Physical explanations about the isotope effects are also provided thoroughly including the influence of vibrational energy differences between the different isotopologues and the impact of the tunneling effect.
Collapse
Affiliation(s)
- Xiaoren Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People's Republic of China
| | - Zhaojun Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People's Republic of China
| | - Fabien Gatti
- ISMO, Institut des Sciences Moléculaires d'Orsay, UMR 8214 CNRS/Université Paris-Saclay, F-91405 Orsay, France
| | - Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People's Republic of China
| |
Collapse
|
13
|
Zhang X, Chen J, Xu X, Liu S, Zhang DH. A neural network potential energy surface for the F + H2O ↔ HF + OH reaction and quantum dynamics study of the isotopic effect. Phys Chem Chem Phys 2021; 23:8809-8816. [DOI: 10.1039/d1cp00641j] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report here a global and full dimensional neural network potential energy surface for the F + CH4 reaction and investigate the isotopic effect on the total reaction probabilities using the time-dependent wave packet method.
Collapse
Affiliation(s)
- Xiaoren Zhang
- State Key Laboratory of Molecular Reaction Dynamics
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| | - Jun Chen
- State Key Laboratory of Structural Chemistry
- Fujian Institute of Research on the Structure of Matter
- Chinese Academy of Sciences
- Fuzhou 350002
- P. R. China
| | - Xin Xu
- State Key Laboratory of Molecular Reaction Dynamics
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| | - Shu Liu
- State Key Laboratory of Molecular Reaction Dynamics
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| |
Collapse
|
14
|
Xin R, Pan M, Song H, Yang M. Mode- and Bond-Selected Reaction of H with Local Mode Molecule HDS. J Phys Chem A 2020; 124:10162-10170. [PMID: 33252233 DOI: 10.1021/acs.jpca.0c09415] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Understanding mode- and bond-selected dynamics of elementary chemical reactions is of central importance in molecular reaction dynamics. The initial state-selected time-dependent wave packet method is employed to study the mode and bond selectivity, isotopic branching ratio, and temperature dependence of rate constants of the two-channel reaction of H with local mode molecule HDS. For the abstraction channel, fundamental excitation of the HS (DS) bond of the reactant HDS significantly enhances the H-abstraction (D-abstraction) reaction, whose efficacy is higher than the same amount of translational energy except at low energies just above the energy threshold. This is in sharp contrast to the prediction of Polanyi rules: translational energy is more efficient than vibrational energy in enhancing a reaction with an early barrier. The recent sudden vector projection model is then applied to rationalize the observed mode specificity, which, however, shows that the translational mode vector has a larger coupling with the reaction coordinate than the stretching vector of the active bond, implying a reversed relative efficacy on promoting the reaction as well. In contrast, the mode and bond specificity for the exchange channel is not as strong as for the abstraction channel due to the regulation of the shallow well along the reaction path.
Collapse
Affiliation(s)
- Rong Xin
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China.,College of Physical Science and Technology, Huazhong Normal University, Wuhan 430079, China
| | - Mengyi Pan
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China.,College of Physical Science and Technology, Huazhong Normal University, Wuhan 430079, China
| | - Hongwei Song
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
| | - Minghui Yang
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
| |
Collapse
|
15
|
Liu Y, Li J. Quantitative Dynamics of the N 2O + C 2H 2 → Oxadiazole Reaction: A Model for 1,3-Dipolar Cycloadditions. ACS OMEGA 2020; 5:23343-23350. [PMID: 32954185 PMCID: PMC7496009 DOI: 10.1021/acsomega.0c03210] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/03/2020] [Accepted: 08/24/2020] [Indexed: 06/11/2023]
Abstract
The reaction N2O + C2H2 → oxadiazole has been considered as a prototype for 1,3-dipolar cycloadditions. Here, we report a comprehensive dynamical study of this important reaction on a full-dimensional potential energy surface, which is fitted to about 64 000 high-level ab initio data by a machine learning approach. Comprehensive dynamical simulations are carried out to provide quantitative chemical insight into its reaction dynamics. In addition to confirming the enhancement effect of the N2O bending mode on the reactivity, intricate mode specificity effects of other vibrational modes in reactants are revealed for the first time. The asymmetric stretching mode of N2O and the C-C-H bending mode of C2H2 show no effect. All remaining modes can enhance the reactivity. In particular, the vibrational excitation of the N2O symmetric stretching mode shows similar enhancement effect on the title reaction, compared to its bending mode excitation. Detailed analysis reveals that the concerted mechanism dominates with the reactants propelled sufficiently close to each other to yield product. This study advances our understanding of the chemical dynamics of the title reaction.
Collapse
|
16
|
|
17
|
Zhang Z, Gatti F, Zhang DH. Full-dimensional quantum mechanical calculations of the reaction probability of the H + CH 4 reaction based on a mixed Jacobi and Radau description. J Chem Phys 2020; 152:201101. [PMID: 32486690 DOI: 10.1063/5.0009721] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
A full-dimensional time-dependent wave packet study using mixed polyspherical Jacobi and Radau coordinates for the title reaction has been reported. The non-reactive moiety CH3 has been described using three Radau vectors, whereas two Jacobi vectors have been used for the bond breaking/formation process. A potential-optimized discrete variable representation basis has been employed to describe the vibrational coordinates of the reagent CH4. About one hundred billion basis functions have been necessary to achieve converged results. The reaction probabilities for some initial vibrational states are given. A comparison between the present approach and other methods, including reduced and full-dimensional ones, is also presented.
Collapse
Affiliation(s)
- Zhaojun Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People's Republic of China
| | - Fabien Gatti
- ISMO, Institut des Sciences Moléculaires d'Orsay - UMR 8214 CNRS/Université Paris-Saclay, F-91405 Orsay, France
| | - Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People's Republic of China
| |
Collapse
|
18
|
Liu Y, Song H, Xie D, Li J, Guo H. Mode Specificity in the OH + HO2 → H2O + O2 Reaction: Enhancement of Reactivity by Exciting a Spectator Mode. J Am Chem Soc 2020; 142:3331-3335. [DOI: 10.1021/jacs.9b12467] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Yang Liu
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Hongwei Song
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Daiqian Xie
- Institute of Theoretical and Computational Chemistry, Key Laboratory of Mesoscopic Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, 210093, China
| | - Jun Li
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| |
Collapse
|
19
|
Abstract
Transiently trapped quantum states along the reaction coordinate in the transition-state region of a chemical reaction are normally called Feshbach resonances or dynamical resonances. Feshbach resonances trapped in the HF-OH interaction well have been discovered in an earlier photodetchment study of FH2O-; however, it is not clear whether these resonances are accessible by the F + H2O reaction. Here we report an accurate state-to-state quantum dynamics study of the F + H2O → HF + OH reaction on an accurate newly constructed potential energy surface. Pronounced oscillatory structures are observed in the total reaction probabilities, in particular at collision energies below 0.2 eV. Detailed analysis reveals that these oscillating structures originate from the Feshbach resonance states trapped in the hydrogen bond well on the HF(v' = 2)-OH vibrationally adiabatic potentials, producing mainly HF(v' = 1) product. Therefore, the resonances observed in the photodetchment study of FH2O- are accessible to the reaction.
Collapse
|
20
|
Li J. Ring-polymer molecular dynamics studies of thermal rate coefficients for reaction F + H2O → HF + OH. CHINESE J CHEM PHYS 2019. [DOI: 10.1063/1674-0068/cjcp1808186] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Jun Li
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 400044, China
| |
Collapse
|
21
|
Zhang Z, Gatti F, Zhang DH. Full dimensional quantum mechanical calculations of the reaction probability of the H + NH3 collision based on a mixed Jacobi and Radau description. J Chem Phys 2019; 150:204301. [DOI: 10.1063/1.5096047] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Zhaojun Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People’s Republic of China
| | - Fabien Gatti
- ISMO, Institut des Sciences Moléculaires d’Orsay—UMR 8214 CNRS/Université Paris-Sud, F-91405 Orsay, France
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, People’s Republic of China
| |
Collapse
|
22
|
Song H, Yang M. Understanding mode-specific dynamics in the local mode representation. Phys Chem Chem Phys 2018; 20:19647-19655. [PMID: 30014087 DOI: 10.1039/c8cp03240h] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Mode specificity is a main characteristic of transition state control of reaction dynamics. The normal mode representation has been widely employed to describe the mode specificity in elementary chemical reactions. However, spectroscopists have demonstrated that the local mode representation has advantages in analyzing the overtone and combination band spectra. In this work, the mode-specific reaction dynamics between the hydrogen atom and the molecules H2S and H2O is studied using a full-dimensional quantum scattering model in the (2 + 1) Radau-Jacobi coordinates. The mode specificities in the reactions that violates our physical intuition in the normal mode representation are well rationalized in the local mode representation. The energy flow between different XH bonds resulting from the intramolecular interaction and/or intermolecular interaction is unveiled, together with its impacts on dynamics of the abstraction and exchange reactions.
Collapse
Affiliation(s)
- Hongwei Song
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China.
| | | |
Collapse
|
23
|
Liu A, Xie C, Li J. Quasi-classical dynamics investigations of the F + D 2 O → DF + OD reaction on a full dimensional accurate potential energy surface. COMPUT THEOR CHEM 2018. [DOI: 10.1016/j.comptc.2018.03.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
|
24
|
Li Y, Wang Y, Wang D. Quantum Dynamics Study of the Potential Energy Minima Effect on Energy Efficiency for the F– + CH3Cl → FCH3 + Cl– Reaction. J Phys Chem A 2017; 121:2773-2779. [PMID: 28346779 DOI: 10.1021/acs.jpca.7b01547] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Yida Li
- College of Physics and Electronics, Shandong Normal University, Jinan 250014, Shandong China
| | - Yuping Wang
- College of Physics and Electronics, Shandong Normal University, Jinan 250014, Shandong China
| | - Dunyou Wang
- College of Physics and Electronics, Shandong Normal University, Jinan 250014, Shandong China
| |
Collapse
|
25
|
Zhao B, Guo H. State‐to‐state quantum reactive scattering in four‐atom systems. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2017. [DOI: 10.1002/wcms.1301] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Bin Zhao
- Department of Chemistry and Chemical Biology University of New Mexico Albuquerque NM USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology University of New Mexico Albuquerque NM USA
| |
Collapse
|
26
|
Wang Y, Li Y, Wang D. Quantum dynamics study of energy requirement on reactivity for the HBr + OH reaction with a negative-energy barrier. Sci Rep 2017; 7:40314. [PMID: 28071762 PMCID: PMC5223161 DOI: 10.1038/srep40314] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2016] [Accepted: 12/01/2016] [Indexed: 01/04/2023] Open
Abstract
A time-dependent, quantum reaction dynamics approach in full dimensional, six degrees of freedom was carried out to study the energy requirement on reactivity for the HBr + OH reaction with an early, negative energy barrier. The calculation shows both the HBr and OH vibrational excitations enhance the reactivity. However, even this reaction has a negative energy barrier, the calculation shows not all forms of energy are equally effective in promoting the reactivity. On the basis of equal amount of total energy, the vibrational energies of both the HBr and OH are more effective in enhancing the reactivity than the translational energy, whereas the rotational excitations of both the HBr and OH hinder the reactivity. The rate constants were also calculated for the temperature range between 5 to 500 K. The quantal rate constants have a better slope agreement with the experimental data than quasi-classical trajectory results.
Collapse
Affiliation(s)
- Yuping Wang
- College of Physics and Electronics, Shandong Normal University, Jinan 250014, Shandong, China
| | - Yida Li
- College of Physics and Electronics, Shandong Normal University, Jinan 250014, Shandong, China
| | - Dunyou Wang
- College of Physics and Electronics, Shandong Normal University, Jinan 250014, Shandong, China
| |
Collapse
|
27
|
Abstract
Recent experimental and theoretical advances in transient reaction dynamics probed by photodetachment of polyatomic anions are reviewed.
Collapse
Affiliation(s)
- Robert E. Continetti
- Department of Chemistry and Biochemistry
- University of California San Diego
- La Jolla
- USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
| |
Collapse
|
28
|
Fu B, Shan X, Zhang DH, Clary DC. Recent advances in quantum scattering calculations on polyatomic bimolecular reactions. Chem Soc Rev 2017; 46:7625-7649. [DOI: 10.1039/c7cs00526a] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This review surveys quantum scattering calculations on chemical reactions of polyatomic molecules in the gas phase published in the last ten years.
Collapse
Affiliation(s)
- Bina Fu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- China
| | - Xiao Shan
- Physical and Theoretical Chemistry Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- China
| | - David C. Clary
- Physical and Theoretical Chemistry Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
| |
Collapse
|
29
|
Bai M, Lu D, Li J. Quasi-classical trajectory studies on the full-dimensional accurate potential energy surface for the OH + H2O = H2O + OH reaction. Phys Chem Chem Phys 2017; 19:17718-17725. [DOI: 10.1039/c7cp02656k] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The first accurate PES for the OH + H2O reaction is developed by using the permutation invariant polynomial-neural network method to fit ∼48 000 CCSD(T)-F12a/AVTZ calculated points.
Collapse
Affiliation(s)
- Mengna Bai
- School of Chemistry and Chemical Engineering
- Chongqing University
- Chongqing 401331
- China
| | - Dandan Lu
- School of Chemistry and Chemical Engineering
- Chongqing University
- Chongqing 401331
- China
| | - Jun Li
- School of Chemistry and Chemical Engineering
- Chongqing University
- Chongqing 401331
- China
| |
Collapse
|
30
|
Udagawa T, Tachikawa M. Nuclear quantum effect and H/D isotope effect on F + (H2O)n → FH + (H2O)n−1OH (n = 1-3) reactions. J Chem Phys 2016; 145:164310. [DOI: 10.1063/1.4966162] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
|
31
|
Song H, Yang M, Guo H. Communication: Equivalence between symmetric and antisymmetric stretching modes of NH3 in promoting H + NH3 → H2 + NH2 reaction. J Chem Phys 2016; 145:131101. [DOI: 10.1063/1.4963286] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Hongwei Song
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Minghui Yang
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Center for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| |
Collapse
|
32
|
Guo H, Liu K. Control of chemical reactivity by transition-state and beyond. Chem Sci 2016; 7:3992-4003. [PMID: 30155041 PMCID: PMC6013787 DOI: 10.1039/c6sc01066k] [Citation(s) in RCA: 68] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2016] [Accepted: 04/06/2016] [Indexed: 11/21/2022] Open
Abstract
It has been long established that the transition state for an activated reaction controls the overall reactivity, serving as the bottleneck for reaction flux. However, the role of the transition state in regulating quantum state resolved reactivity has only been addressed more recently, thanks to advances in both experimental and theoretical techniques. In this perspective, we discuss some recent advances in understanding mode-specific reaction dynamics in bimolecular reactions, mainly focusing on the X + H2O/CH4 (X = H, F, Cl, and O(3P)) systems, extensively studied in our groups. These advances shed valuable light on the importance of the transition state in mode-specific and steric dynamics of these prototypical reactions. It is shown that many mode-specific phenomena can be understood in terms of a transition-state based model, which assumes in the sudden limit that the ability of a reactant mode for promoting the reaction stems from its coupling with the reaction coordinate at the transition state. Yet, in some cases the long-range anisotropic interactions in the entrance (or exit) valley, which govern how the trajectories reach (or leave) the transition state, also come into play, thus modifying the reactive outcomes.
Collapse
Affiliation(s)
- Hua Guo
- Department of Chemistry and Chemical Biology , University of New Mexico , Albuquerque , New Mexico 87131 , USA .
| | - Kopin Liu
- Institute of Atomic and Molecular Sciences , Academia Sinica , Taipei 10617 , Taiwan .
- Department of Physics , National Taiwan University , Taipei 10617 , Taiwan
| |
Collapse
|
33
|
Zhao B, Sun Z, Guo H. State-to-state mode selectivity in the HD + OH reaction: Perspectives from two product channels. J Chem Phys 2016; 144:214303. [DOI: 10.1063/1.4952764] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Bin Zhao
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Zhigang Sun
- Center for Theoretical and Computational Chemistry and State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| |
Collapse
|
34
|
Song H, Lu Y, Li J, Yang M, Guo H. Mode specificity in the OH + CHD3 reaction: Reduced-dimensional quantum and quasi-classical studies on an ab initio based full-dimensional potential energy surface. J Chem Phys 2016; 144:164303. [DOI: 10.1063/1.4947252] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Hongwei Song
- Key Laboratory of Magnetic Resonance in Biological Systems, National Center for Magnetic Resonance in Wuhan, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Yunpeng Lu
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, Singapore 637371, Singapore
| | - Jun Li
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 400044, China
| | - Minghui Yang
- Key Laboratory of Magnetic Resonance in Biological Systems, National Center for Magnetic Resonance in Wuhan, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| |
Collapse
|
35
|
Abstract
In this review, we survey the latest advances in theoretical understanding of bimolecular reaction dynamics in the past decade. The remarkable recent progress in this field has been driven by more accurate and efficient ab initio electronic structure theory, effective potential-energy surface fitting techniques, and novel quantum scattering algorithms. Quantum mechanical characterization of bimolecular reactions continues to uncover interesting dynamical phenomena in atom-diatom reactions and beyond, reaching an unprecedented level of sophistication. In tandem with experimental explorations, these theoretical developments have greatly advanced our understanding of key issues in reaction dynamics, such as microscopic reaction mechanisms, mode specificity, product energy disposal, influence of reactive resonances, and nonadiabatic effects.
Collapse
Affiliation(s)
- Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China; .,Center for Theoretical and Computational Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131;
| |
Collapse
|
36
|
|
37
|
Lu D, Qi J, Yang M, Behler J, Song H, Li J. Mode specific dynamics in the H2 + SH → H + H2S reaction. Phys Chem Chem Phys 2016; 18:29113-29121. [DOI: 10.1039/c6cp05780b] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Full-dimensional quantum dynamics and quasi-classical trajectory studies indicate strong mode selectivity in the H2 + SH reaction.
Collapse
Affiliation(s)
- Dandan Lu
- School of Chemistry and Chemical Engineering
- Chongqing University
- Chongqing 401331
- China
| | - Ji Qi
- Key Laboratory of Magnetic Resonance in Biological Systems
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics
- National Center for Magnetic Resonance in Wuhan
- Wuhan Institute of Physics and Mathematics
- Chinese Academy of Sciences
| | - Minghui Yang
- Key Laboratory of Magnetic Resonance in Biological Systems
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics
- National Center for Magnetic Resonance in Wuhan
- Wuhan Institute of Physics and Mathematics
- Chinese Academy of Sciences
| | - Jörg Behler
- Lehrstuhl für Theoretische Chemie
- Ruhr-Universität Bochum
- Bochum 44780
- Germany
| | - Hongwei Song
- Key Laboratory of Magnetic Resonance in Biological Systems
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics
- National Center for Magnetic Resonance in Wuhan
- Wuhan Institute of Physics and Mathematics
- Chinese Academy of Sciences
| | - Jun Li
- School of Chemistry and Chemical Engineering
- Chongqing University
- Chongqing 401331
- China
| |
Collapse
|
38
|
Jiang B, Yang M, Xie D, Guo H. Quantum dynamics of polyatomic dissociative chemisorption on transition metal surfaces: mode specificity and bond selectivity. Chem Soc Rev 2016; 45:3621-40. [DOI: 10.1039/c5cs00360a] [Citation(s) in RCA: 122] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Recent advances in quantum dynamical characterization of polyatomic dissociative chemisorption on accurate global potential energy surfaces are critically reviewed.
Collapse
Affiliation(s)
- Bin Jiang
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
- Department of Chemical Physics
| | - Minghui Yang
- Key Laboratory of Magnetic Resonance in Biological Systems
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics
- Wuhan Centre for Magnetic Resonance
- Wuhan Institute of Physics and Mathematics
- Chinese Academy of Sciences
| | - Daiqian Xie
- Institute of Theoretical and Computational Chemistry
- Key Laboratory of Mesoscopic Chemistry
- School of Chemistry and Chemical Engineering
- Nanjing University
- Nanjing 210093
| | - Hua Guo
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
| |
Collapse
|
39
|
Ma J, Guo H. Reactive and Nonreactive Feshbach Resonances Accessed by Photodetachment of FH2O(-). J Phys Chem Lett 2015; 6:4822-4826. [PMID: 26580571 DOI: 10.1021/acs.jpclett.5b02366] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
The photodetachment of the FH2O(-) anion is investigated quantum mechanically on accurate full-dimensional potential energy surfaces of the two lowest-lying electronic states of FH2O. The calculated photoelectron spectrum possesses both broad and sharp features, corresponding to reactive and nonreactive Feshbach resonances. The former extend to both reactant and product channels over the transition state, while the latter are supported by a hydrogen bonded HO-HF well in the product channel. Many of the resonances are assignable with quantum numbers for the stretching and bending modes of the HO-HF complex as well as the H-F vibration. The implications of these resonances in the F + H2O ↔ HF + HO reaction are discussed.
Collapse
Affiliation(s)
- Jianyi Ma
- Institute of Atomic and Molecular Physics, Sichuan University , Chengdu, Sichuan 610065, China
| | | |
Collapse
|
40
|
Song H, Lee SY, Lu Y, Guo H. Full-Dimensional Quantum Dynamical Studies of the Cl + HOD → HCl/DCl + OD/OH Reaction: Bond Selectivity and Isotopic Branching Ratio. J Phys Chem A 2015; 119:12224-30. [DOI: 10.1021/acs.jpca.5b06230] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Hongwei Song
- Division
of Chemistry and Biological Chemistry, School of Physical and Mathematical
Sciences, Nanyang Technological University, Singapore 637371, Singapore
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Soo-Ying Lee
- Division
of Chemistry and Biological Chemistry, School of Physical and Mathematical
Sciences, Nanyang Technological University, Singapore 637371, Singapore
| | - Yunpeng Lu
- Division
of Chemistry and Biological Chemistry, School of Physical and Mathematical
Sciences, Nanyang Technological University, Singapore 637371, Singapore
| | - Hua Guo
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| |
Collapse
|
41
|
Song H, Guo H. Vibrational and Rotational Mode Specificity in The Cl + H2O → HCl + OH Reaction: A Quantum Dynamical Study. J Phys Chem A 2015; 119:6188-94. [DOI: 10.1021/acs.jpca.5b03740] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Hongwei Song
- Department of Chemistry
and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hua Guo
- Department of Chemistry
and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| |
Collapse
|
42
|
Li J, Jiang B, Song H, Ma J, Zhao B, Dawes R, Guo H. From ab Initio Potential Energy Surfaces to State-Resolved Reactivities: X + H2O ↔ HX + OH [X = F, Cl, and O(3P)] Reactions. J Phys Chem A 2015; 119:4667-87. [DOI: 10.1021/acs.jpca.5b02510] [Citation(s) in RCA: 85] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jun Li
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
- School of Chemistry
and Chemical Engineering, Chongqing University, Chongqing 400044, China
| | - Bin Jiang
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hongwei Song
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Jianyi Ma
- Institute of Atomic
and Molecular Physics, Sichuan University, Chengdu, Sichuan 610065, China
| | - Bin Zhao
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Richard Dawes
- Department
of Chemistry, Missouri University of Science and Technology, Rolla, Missouri 65409, United States
| | - Hua Guo
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| |
Collapse
|
43
|
Song H, Guo H. Mode specificity in bond selective reactions F + HOD → HF + OD and DF + OH. J Chem Phys 2015; 142:174309. [DOI: 10.1063/1.4919666] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Hongwei Song
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| |
Collapse
|
44
|
Yan P, Wang Y, Li Y, Wang D. A seven-degree-of-freedom, time-dependent quantum dynamics study on the energy efficiency in surmounting the central energy barrier of the OH + CH3 → O + CH4 reaction. J Chem Phys 2015; 142:164303. [DOI: 10.1063/1.4918981] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Pengxiu Yan
- College of Physics and Electronics, Shandong Normal University, Jinan 250014, China
| | - Yuping Wang
- College of Physics and Electronics, Shandong Normal University, Jinan 250014, China
| | - Yida Li
- College of Physics and Electronics, Shandong Normal University, Jinan 250014, China
| | - Dunyou Wang
- College of Physics and Electronics, Shandong Normal University, Jinan 250014, China
| |
Collapse
|
45
|
Li J, Corchado JC, Espinosa-Garcia J, Guo H. Final state-resolved mode specificity in HX + OH → X + H2O (X = F and Cl) reactions: A quasi-classical trajectory study. J Chem Phys 2015; 142:084314. [DOI: 10.1063/1.4913522] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Jun Li
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 400030, China
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Jose C. Corchado
- Departamento de Quimica Fisica, Universidad de Extremadura, Badajoz 06071, Spain
| | | | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| |
Collapse
|
46
|
Liu K. Perspective: Vibrational-induced steric effects in bimolecular reactions. J Chem Phys 2015; 142:080901. [DOI: 10.1063/1.4913323] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Kopin Liu
- Institute of Atomic and Molecular Sciences (IAMS), Academia Sinica, P.O. Box 23-166, Taipei 10617, Taiwan
| |
Collapse
|
47
|
Zhao B, Guo H. Modulations of Transition-State Control of State-to-State Dynamics in the F + H2O → HF + OH Reaction. J Phys Chem Lett 2015; 6:676-680. [PMID: 26262484 DOI: 10.1021/acs.jpclett.5b00071] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The full-dimensional quantum dynamics of the F + H2O → HF + OH reaction is investigated at the state-to-state level for the first time using a transition-state wave packet method on an accurate global potential energy surface. It is found that the H2O rotation enhances the reactivity and the product-state distribution is dominated by HF vibrational excitation while the OH moiety serves effectively as a spectator. These observations underscore the transition-state control of the reaction dynamics, as both the H2O rotational and HF vibrational modes are strongly coupled to the reaction coordinate at the transition state. It is also shown that the transition-state dominance of the reaction dynamics is modulated by other features on the potential energy surface, such as the prereaction well.
Collapse
Affiliation(s)
- Bin Zhao
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| |
Collapse
|
48
|
Song H, Guo H. Mode Specificity in the HCl + OH → Cl + H2O Reaction: Polanyi’s Rules vs Sudden Vector Projection Model. J Phys Chem A 2015; 119:826-31. [DOI: 10.1021/jp512021m] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Hongwei Song
- Department of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hua Guo
- Department of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| |
Collapse
|
49
|
Guo H, Jiang B. The sudden vector projection model for reactivity: mode specificity and bond selectivity made simple. Acc Chem Res 2014; 47:3679-85. [PMID: 25393632 DOI: 10.1021/ar500350f] [Citation(s) in RCA: 175] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
CONSPECTUS: Mode specificity is defined by the differences in reactivity due to excitations in various reactant modes, while bond selectivity refers to selective bond breaking in a reaction. These phenomena not only shed light on reaction dynamics but also open the door for laser control of reactions. The existence of mode specificity and bond selectivity in a reaction indicates that not all forms of energy are equivalent in promoting the reactivity, thus defying a statistical treatment. They also allow the enhancement of reactivity and control product branching ratio. As a result, they are of central importance in chemistry. This Account discusses recent advances in our understanding of these nonstatistical phenomena. In particular, the newly proposed sudden vector projection (SVP) model and its applications are reviewed. The SVP model is based on the premise that the collision in many direct reactions is much faster than intramolecular vibrational energy redistribution in the reactants. In such a sudden limit, the coupling of a reactant mode with the reaction coordinate at the transition state, which dictates its ability to promote the reaction, is approximately quantified by the projection of the former onto the latter. The SVP model can be considered as a generalization of the venerable Polanyi's rules, which are based on the location of the barrier. The SVP model is instead based on properties of the saddle point and as a result capable of treating the translational, rotational, and multiple vibrational modes in reactions involving polyatomic reactants. In case of surface reactions, the involvement of surface atoms can also be examined. Taking advantage of microscopic reversibility, the SVP model has also been used to predict product energy disposal in reactions. This simple yet powerful rule of thumb has been successfully demonstrated in many reactions including uni- and bimolecular reactions in the gas phase and gas-surface reactions. The success of the SVP model underscores the importance of the transition state in controlling mode-specific and bond-selective chemistry.
Collapse
Affiliation(s)
- Hua Guo
- Department
of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Bin Jiang
- Department
of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| |
Collapse
|
50
|
de Oliveira-Filho AGS, Ornellas FR, Bowman JM. Energy disposal and thermal rate constants for the OH + HBr and OH + DBr reactions: quasiclassical trajectory calculations on an accurate potential energy surface. J Phys Chem A 2014; 118:12080-8. [PMID: 25365787 DOI: 10.1021/jp509430p] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We report reaction cross sections, energy disposal, and rate constants for the OH + HBr → Br + H2O and OH + DBr → Br + HDO reactions from quasiclassical trajectory calculations using an ab initio potential energy surface [ de Oliveira-Filho , A. G. S. ; Ornellas , F. R. ; Bowman , J. M. J. Phys. Chem. Lett. 2014 , 5 , 706 - 712 ]. Comparison with available experiments are made and generally show good agreement.
Collapse
Affiliation(s)
- Antonio G S de Oliveira-Filho
- Departamento de Quı́mica Fundamental, Instituto de Quı́mica, Universidade de São Paulo , São Paulo 05508-000, Brazil
| | | | | |
Collapse
|