1
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Tahara K, Morino T, Morimoto Y, Nakamura Y, Sugimoto K, Ozawa Y, Abe M. Synthetic, Electrochemical, DFT, and Synchrotron X-ray Charge-Density Studies on Oxo-centered Triruthenium Clusters Supported by Electron-Withdrawing Carboxylates. Inorg Chem 2024. [PMID: 39330546 DOI: 10.1021/acs.inorgchem.4c02381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/28/2024]
Abstract
We herein report the synthesis, characterizations, and synchrotron X-ray charge-density studies of oxo-centered triruthenium(II,III,III) clusters [Ru3O(CHCl2COO)6(py)3] (1) and [Ru3O(CHCl2COO)6(CO)(py)2] (2) (py = pyridine). Dichloroacetate was chosen for its large scattering factor of the Cl atom, and its electron-withdrawing nature results in significant stabilization of the targeted lower-valent Ru3II,III,III state in the cluster framework. Multipole analysis revealed that the difference in electron populations between two crystallographically independent Ru centers is small for 1 (Δ = 0.30 e) but large for 2 (Δ = 1.46 e). Remarkable differences between 1 and 2 are also found in their static deformation density maps; substantial local charge depletion was found around the central μ3O atom for 1, which is less pronounced for 2. According to the topological characterization of Ru-μ3O bonds associated with the bond critical point, bcp, the electron density, ρbcp, is in the range of 0.79-0.89 e Å-3, and the total energy density, Hbcp, is in the range of -0.21 to -0.05 hartree Å-3. These findings represent the first charge-density distribution analysis of mixed-valence multinuclear Ru complexes including comparison between 3d and 4d transition-metal systems.
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Affiliation(s)
- Keishiro Tahara
- Graduate School of Science, University of Hyogo, 3-2-1, Koto, Kamigori-cho, Ako-gun 678-1297, Hyogo, Japan
| | - Takashi Morino
- Graduate School of Science, University of Hyogo, 3-2-1, Koto, Kamigori-cho, Ako-gun 678-1297, Hyogo, Japan
| | - Yuto Morimoto
- Faculty of Science, University of Hyogo, 3-2-1, Koto, Kamigori-cho, Ako-gun 678-1297, Hyogo, Japan
| | - Yuiga Nakamura
- Diffraction and Scattering Division, Japan Synchrotron Radiation Research Institute, 1-1-1 Koto, Sayo-cho, Sayo-gun 679-5198, Hyogo, Japan
| | - Kunihisa Sugimoto
- Research & Utilization Division, Japan Synchrotron Radiation Research Institute, 1-1-1 Koto, Sayo-cho, Sayo-gun 679-5198, Hyogo, Japan
- Department of Chemistry, Faculty of Science and Technology, Kindai University, 3-4-1 Kowakae, Higashiosaka 577-8502, Osaka, Japan
| | - Yoshiki Ozawa
- Graduate School of Science, University of Hyogo, 3-2-1, Koto, Kamigori-cho, Ako-gun 678-1297, Hyogo, Japan
| | - Masaaki Abe
- Graduate School of Science, University of Hyogo, 3-2-1, Koto, Kamigori-cho, Ako-gun 678-1297, Hyogo, Japan
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2
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Kartashov SV, Saifina AF, Fayzullin RR. Toward the Chemical Structure of Diborane: Electronic Force Density Fields, Effective Electronegativity, and Internuclear Turning Surface Properties. J Phys Chem A 2024; 128:7284-7297. [PMID: 39163513 DOI: 10.1021/acs.jpca.4c03492] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/22/2024]
Abstract
The chemical structure of diborane was elucidated through the superposition of the vector fields of the electron density gradient ∇ρ(r), the electrostatic force Fes(r), and the kinetic force Fk(r), together with the analysis of the cumulative charges of the atoms and pseudoatoms delimited in the aforementioned fields. It was proposed that the Fk-pseudoatomic charge could be employed as a metric for quantifying the ionic component of a related atomic charge. The electron permeability across an internuclear turning surface─specifically, the zero-flux surface in Fk(r)─was characterized by probing it through mapping the total static potential φem(r). The conceptualization of post hoc electronegativity was presented for consideration. Our analysis revealed that the ordinary B-H and bent B-μ-H bonds in diborane demonstrate the polar covalent character with minor contributions of the ionic component. The former bond exhibits a greater electron permeability through the internuclear turning surface, indicating a stronger tendency for electron sharing between the corresponding nucleus-dominated regions. The electron density accumulation along the bent B-μ-H bond path diverges from the minimum action trajectories of the forces Fes(r) and Fk(r). This phenomenon can be associated with the structural strain within the angled, three-center two-electron bonding B-μ-H-B. The internuclear B···B paths were identified in Fes(r) and Fk(r), in contrast to ∇ρ(r). This fact, in conjunction with a pronounced electron permeability through the mutual turning surface between the two boron nuclei, implies a certain degree of electron exchange between the boron-dominated pseudoatomic regions. Furthermore, the anomalous [B-]H···μ-H intermolecular polar interactions were described between the strongly negatively charged hydrogen atoms in the monoclinic crystalline β-phase of diborane. In fact, the ionic contributions to the charges of the hydrogen atoms are shown to be relatively small.
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Affiliation(s)
- Sergey V Kartashov
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, 8 Arbuzov Street, Kazan 420088, Russian Federation
| | - Alina F Saifina
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, 8 Arbuzov Street, Kazan 420088, Russian Federation
| | - Robert R Fayzullin
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, 8 Arbuzov Street, Kazan 420088, Russian Federation
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3
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Vogel YB, Pham LN, Stam M, Ubbink RF, Coote ML, Houtepen AJ. Solvation Shifts the Band-Edge Position of Colloidal Quantum Dots by Nearly 1 eV. J Am Chem Soc 2024; 146:9928-9938. [PMID: 38530865 PMCID: PMC11009959 DOI: 10.1021/jacs.4c00402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Revised: 02/23/2024] [Accepted: 02/27/2024] [Indexed: 03/28/2024]
Abstract
The optoelectronic properties of colloidal quantum dots (cQDs) depend critically on the absolute energy of the conduction and valence band edges. It is well known these band-edge energies are sensitive to the ligands on the cQD surface, but it is much less clear how they depend on other experimental conditions, like solvation. Here, we experimentally determine the band-edge positions of thin films of PbS and ZnO cQDs via spectroelectrochemical measurements. To achieve this, we first carefully evaluate and optimize the electrochemical injection of electrons and holes into PbS cQDs. This results in electrochemically fully reversible electron injection with >8 electrons per PbS cQDs, allowing the quantitative determination of the conduction band energy for PbS cQDs with various diameters and surface compositions. Surprisingly, we find that the band-edge energies shift by nearly 1 eV in the presence of different solvents, a result that also holds true for ZnO cQDs. We argue that complexation and partial charge transfer between solvent and surface ions are responsible for this large effect of the solvent on the band-edge energy. The trend in the energy shift matches the results of density functional theory (DFT) calculations in explicit solvents and scales with the energy of complexation between surface cations and solvents. As a first approximation, the solvent Lewis basicity can be used as a good descriptor to predict the shift of the conduction and valence band edges of solvated cQDs.
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Affiliation(s)
- Yan B. Vogel
- Department
of Chemical Engineering, Delft University
of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
| | - Le Nhan Pham
- Institute
for Nanoscale Science and Technology, College of Science and Engineering, Flinders University, Bedford Park, South Australia 5042, Australia
| | - Maarten Stam
- Department
of Chemical Engineering, Delft University
of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
| | - Reinout F. Ubbink
- Department
of Chemical Engineering, Delft University
of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
| | - Michelle L. Coote
- Institute
for Nanoscale Science and Technology, College of Science and Engineering, Flinders University, Bedford Park, South Australia 5042, Australia
| | - Arjan J. Houtepen
- Department
of Chemical Engineering, Delft University
of Technology, Van der Maasweg 9, 2629 HZ Delft, The Netherlands
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4
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Abraham AB, Panneerselvam M, Ebenezer C, Costa LT, Vijay Solomon R. A theoretical study on radical scavenging activity of phenolic derivatives naturally found within Alternaria alternata extract. Org Biomol Chem 2024; 22:2059-2074. [PMID: 38363153 DOI: 10.1039/d3ob02126b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2024]
Abstract
The increasing oxidative stress demands potential chemical compounds derived from natural resources with good antioxidant activity to overcome adverse health issues. In this context, we investigated the antioxidant properties of four dibenzopyrone phenolic compounds obtained from the endophytic fungus Alternaria alternata: altenusin, altenusin B, alterlactone, and dehydroaltenusin using DFT calculations. Our investigation focused on understanding the structure-antioxidant property relationship. It delved into probing the activity by modelling the antioxidant mechanisms. The computed transition states and thermochemical parameters, along with the structural attributes, indicate that altenusin B has good antioxidant efficacy among the four compounds, and it follows the HAT mechanism in an aqueous phase. Remarkably, our findings indicate that altenusin B exhibits potent HOO˙ radical scavenging properties, characterized by the computed high rate constant. The molecular docking studies of these compounds with the pro-oxidant enzyme xanthine oxidase (XO) gave insights into the binding modes of the compounds in the protein environment. Furthermore, molecular dynamics (MD) simulations were employed to study the interaction and stability of the compounds inside the XO enzyme. Our exploration sheds light on the radical scavenging potential of the -OH sites and the underlying antioxidant mechanisms that underpin the compounds' effective antioxidant potential.
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Affiliation(s)
- Alen Binu Abraham
- Department of Chemistry, St Stephen's College, Affiliated to the University of Delhi, Delhi - 110007, India
| | - Murugesan Panneerselvam
- MolMod-CS - Instituto de Química, Universidade Federal Fluminense, Campos Valonginho s/n, Centro, Niterói 24020-14, Rio de Janeiro, Brazil
| | - Cheriyan Ebenezer
- Department of Chemistry, Madras Christian College (Autonomous), Affiliated to the University of Madras, Chennai - 600 059, Tamil Nadu, India.
| | - Luciano T Costa
- MolMod-CS - Instituto de Química, Universidade Federal Fluminense, Campos Valonginho s/n, Centro, Niterói 24020-14, Rio de Janeiro, Brazil
| | - Rajadurai Vijay Solomon
- Department of Chemistry, Madras Christian College (Autonomous), Affiliated to the University of Madras, Chennai - 600 059, Tamil Nadu, India.
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5
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Pawlędzio S, Ziemniak M, Trzybiński D, Arhangelskis M, Makal A, Woźniak K. Influence of N-protonation on electronic properties of acridine derivatives by quantum crystallography. RSC Adv 2024; 14:5340-5350. [PMID: 38348299 PMCID: PMC10859733 DOI: 10.1039/d3ra08081a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2023] [Accepted: 01/30/2024] [Indexed: 02/15/2024] Open
Abstract
Applications of 9-aminoacridine (9aa) and its derivatives span fields such as chemistry, biology, and medicine, including anticancer and antimicrobial activities. Protonation of such molecules can alter their bioavailability as weakly basic drugs like aminoacridines exhibit reduced solubility at high pH levels potentially limiting their effectiveness in patients with elevated gastric pH. In this study, we analyse the influence of protonation on the electronic characteristics of the molecular organic crystals of 9-aminoacridine. The application of quantum crystallography, including aspherical atom refinement, has enriched the depiction of electron density in the studied systems and non-covalent interactions, providing more details than previous studies. Our experimental results, combined with a topological analysis of the electron density and its Laplacian, provided detailed descriptions of how protonation changes the electron density distribution around the amine group and water molecule, concurrently decreasing the electron density at bond critical points of N/O-H bonds. Protonation also alters the molecular architecture of the systems under investigation. This is reflected in different proportions of the N⋯H and O⋯H intermolecular contacts for the neutral and protonated forms. Periodic DFT calculations of the cohesive energies of the crystal lattice, as well as computed interaction energies between molecules in the crystal, confirm that protonation stabilises the crystal structure due to a positive synergy between strong halogen and hydrogen bonds. Our findings highlight the potential of quantum crystallography in predicting crystal structure properties and point to its possible applications in developing new formulations for poorly soluble drugs.
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Affiliation(s)
- Sylwia Pawlędzio
- Neutron Scattering Division, Oak Ridge National Laboratory Oak Ridge TN 37831 USA
- Department of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-093 Warszawa Poland
| | - Marcin Ziemniak
- Department of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-093 Warszawa Poland
| | - Damian Trzybiński
- Department of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-093 Warszawa Poland
| | - Mihails Arhangelskis
- Department of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-093 Warszawa Poland
| | - Anna Makal
- Department of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-093 Warszawa Poland
| | - Krzysztof Woźniak
- Department of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-093 Warszawa Poland
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6
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Pugliese ER, Benner F, Demir S. From an Isolable Bismolyl Anion to an Yttrium-Bismolyl Complex with μ-Bridging Bismuth(I) Centers and Polar Covalent Y-Bi Bonds. Chemistry 2023; 29:e202302687. [PMID: 37650379 DOI: 10.1002/chem.202302687] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 08/25/2023] [Accepted: 08/28/2023] [Indexed: 09/01/2023]
Abstract
The synthesis and first structural characterization of the [K(18-crown-6)] bismolyl Bitet (C4 Me4 Bi) contact ion pair (1) is presented. Notably, according to Natural Resonance Theory calculations, the Bitet anion of 1 features two types of leading mesomeric structures with localized anionic charge and two lone pairs of electrons at the BiI center, as well as delocalized anionic charge in the π-conjugated C4 Bi ring. The lone pairs at Bi enable a unique bridging coordination mode of the bismolyl ligand, as shown for the first rare earth metal bismolyl complex (Cptet 2 Y)2 (μ-η1 -Bitet )2 (2). The latter results from the salt metathesis reaction of KBitet with Cptet 2 Y(BPh4 ) (Cptet =C5 Me4 H). The Y-Bi bonding interaction in 2 of 16.6 % covalency at yttrium is remarkably large.
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Affiliation(s)
| | - Florian Benner
- Department of Chemistry, Michigan State University, East Lansing, MI 48824, USA
| | - Selvan Demir
- Department of Chemistry, Michigan State University, East Lansing, MI 48824, USA
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7
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Zhang Z, Xu Y. Hydrothermal Synthesis of Highly Crystalline Zwitterionic Vinylene-Linked Covalent Organic Frameworks with Exceptional Photocatalytic Properties. J Am Chem Soc 2023; 145:25222-25232. [PMID: 37856866 DOI: 10.1021/jacs.3c08220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2023]
Abstract
Ionic covalent organic frameworks (COFs) featuring both crystallinity and ionic characteristics have attracted tremendous attention in recent years. Compared with single anion- or cation-containing ionic COFs, zwitterionic COFs possess unique functionalities beyond single ionic COFs such as tunable charge density and superhydrophilic and highly ion-conductive characteristics, endowing them with huge potential in various applications. However, it remains a considerable challenge to directly synthesize robust, highly crystalline zwitterionic COFs from the original building blocks. Herein, we report a green hydrothermal synthesis strategy to prepare highly crystalline zwitterionic vinylene-linked COFs (ZVCOFs) from the predesigned zwitterionic building block by utilizing 4-dimethylaminopyridine (DMAP) as the high-efficiency catalyst for the first time. Detailed theoretical calculations and experiments revealed that both the high catalytic activity of DMAP and the unique role of water contributed to the formation of highly crystalline ZVCOFs. It was found that the participation of water could not only remarkably reduce the activation energy barrier and thus enhance the reaction reversibility but also enable the hydration of zwitterionic sites and facilitate ordered layered arrangement, which are favorable for the ZVCOF crystallization. Benefiting from the highly π-conjugated structure and hydrophilic characteristic, the obtained ZVCOFs achieved an ultrahigh sacrificial photocatalytic hydrogen evolution rate of 2052 μmol h-1 under visible light irradiation with an apparent quantum yield up to 47.1% at 420 nm, superior to nearly all COF-based photocatalysts ever reported. Moreover, the ZVCOFs could be deposited on a support as a photocatalytic film device, which demonstrated a remarkable photocatalytic performance of 402.1 mmol h-1 m-2 for hydrogen evolution.
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Affiliation(s)
- Zhao Zhang
- School of Engineering, Westlake University, Hangzhou 310024, Zhejiang Province, China
| | - Yuxi Xu
- School of Engineering, Westlake University, Hangzhou 310024, Zhejiang Province, China
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8
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Keot N, Sarma M. Probing the dynamic behaviour and magnetic identification of seven coordinated Mn(II) complexes: a combined AIMD and multi-reference approach. Phys Chem Chem Phys 2023; 25:31165-31177. [PMID: 37953737 DOI: 10.1039/d3cp04072k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2023]
Abstract
We present an in-depth solution phase dynamics of rare seven coordinated pentagonal bipyramidal Mn(II) complexes, together with their binding affinity anticipated using ab initio molecular dynamics (AIMD) simulations and density functional theory (DFT). Moreover, the simulations at different temperatures (25 °C and 90 °C) interpret the rigidity and stability of the ligands with Mn(II) ions. An intuitive approach for modulating the easy plane magnetic anisotropy of the mononuclear Mn(II) complex has been revealed by this work. In this regard, we have performed an extensive theoretical study based on the ab initio CASSCF/NEVPT2 method, exhibiting the presence of an easy plane magnetic anisotropy with a positive value of axial zero-field splitting (ZFS) parameter D. The complex's magnetic properties and electronic relaxation reveal that the rhombic ZFS term (E) can be modulated as the symmetry around the Mn(II) ion varies. The magnitude of the D-value increased with a more symmetrical equatorial ligand as found in the order of [Mn(pydpa)(H2O)] > [Mn(cbda)(H2O)]- > [Mn(dpaaa)(H2O)]- > [Mn(dpasam)(H2O)]-. Furthermore, we found that substituting the equatorial oxygen atom with heavier S and Se-donor atoms switches the sign of magnetic anisotropy for the Mn(II) complexes. The magnitude of the D-value increased when the energy levels of the ground state (GS) and the first excited state (ES) decreased. The observed magneto-structural correlation reveals that shortening the distance of the axial water molecule (Mn-O(w)) increases the D-value by an order of magnitude for the symmetrical [Mn(pydpa)(H2O)] complex. Overall, the combined analysis of solution phase dynamics of Mn(II) complexes and their magnetic characterization opens up new avenues in coordination chemistry, molecular magnetism, spin-crossover materials, and catalysis.
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Affiliation(s)
- Niharika Keot
- Department of Chemistry, Indian Institute of Technology Guwahati, Assam, 781039, India.
| | - Manabendra Sarma
- Department of Chemistry, Indian Institute of Technology Guwahati, Assam, 781039, India.
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9
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Lefrancois-Gagnon KM, Mawhinney RC. Toward Universal Substituent Constants: Relating QTAIM Functional Group Descriptors to Substituent Effect Proxies. J Chem Inf Model 2023; 63:6068-6080. [PMID: 37729015 DOI: 10.1021/acs.jcim.3c00987] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/22/2023]
Abstract
Substituents modulate reactions, but their effects are commonly described by using proxies to their functional group properties. Substituent descriptors from the quantum theory of atoms in molecules, which are true functional group properties, are related here to these proxies, which have historically had chemically relevant meaning. Due to the large number of descriptors, multivariate analysis is used to intuit their significance. Multiple linear regression, principal component, and partial least squares regression analyses highlight that these substituent descriptors contain similar information to the proxies while being intrinsic, predictable substituent properties. Sources of error limiting quantitative reproduction of the proxy data include transferability, experimental accuracy, and solvation issues.
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Affiliation(s)
| | - Robert C Mawhinney
- Department of Chemistry, Lakehead University, 955 Oliver Road, Thunder Bay, Ontario P7B 5E1, Canada
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10
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Le Dé Q, Bouammali A, Bijani C, Vendier L, Del Rosal I, Valyaev DA, Dinoi C, Simonneau A. An Experimental and Computational Investigation Rules Out Direct Nucleophilic Addition on the N 2 Ligand in Manganese Dinitrogen Complex [Cp(CO) 2 Mn(N 2 )]. Angew Chem Int Ed Engl 2023; 62:e202305235. [PMID: 37379032 DOI: 10.1002/anie.202305235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2023] [Revised: 06/27/2023] [Accepted: 06/28/2023] [Indexed: 06/29/2023]
Abstract
We have re-examined the reactivity of the manganese dinitrogen complex [Cp(CO)2 Mn(N2 )] (1, Cp=η5 -cyclopentadienyl, C5 H5 ) with phenylithium (PhLi). By combining experiment and density functional theory (DFT), we have found that, unlike previously reported, the direct nucleophilic attack of the carbanion onto coordinated dinitrogen does not occur. Instead, PhLi reacts with one of the CO ligands to provide an anionic acylcarbonyl dinitrogen metallate [Cp(CO)(N2 )MnCOPh]Li (3) that is stable only below -40 °C. Full characterization of 3 (including single crystal X-ray diffraction) was performed. This complex decomposes quickly above -20 °C with N2 loss to give a phenylate complex [Cp(CO)2 MnPh]Li (2). The latter compound was erroneously formulated as an anionic diazenido compound [Cp(CO)2 MnN(Ph)=N]Li in earlier reports, ruling out the claimed and so-far unique behavior of the N2 ligand in 1. DFT calculations were run to explore both the hypothesized and the experimentally verified reactivity of 1 with PhLi and are fully consistent with our results. Direct attack of a nucleophile on metal-coordinated N2 remains to be demonstrated.
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Affiliation(s)
- Quentin Le Dé
- LCC-CNRS, Université de Toulouse, CNRS, UPS, 205 route de Narbonne, BP44099, 31077, Toulouse cedex 4, France
| | - Amal Bouammali
- LCC-CNRS, Université de Toulouse, CNRS, UPS, 205 route de Narbonne, BP44099, 31077, Toulouse cedex 4, France
| | - Christian Bijani
- LCC-CNRS, Université de Toulouse, CNRS, UPS, 205 route de Narbonne, BP44099, 31077, Toulouse cedex 4, France
| | - Laure Vendier
- LCC-CNRS, Université de Toulouse, CNRS, UPS, 205 route de Narbonne, BP44099, 31077, Toulouse cedex 4, France
| | - Iker Del Rosal
- LPCNO, CNRS & INSA, Université Paul Sabatier, 135 Avenue de Rangueil, 31077, Toulouse, France
| | - Dmitry A Valyaev
- LCC-CNRS, Université de Toulouse, CNRS, UPS, 205 route de Narbonne, BP44099, 31077, Toulouse cedex 4, France
| | - Chiara Dinoi
- LPCNO, CNRS & INSA, Université Paul Sabatier, 135 Avenue de Rangueil, 31077, Toulouse, France
| | - Antoine Simonneau
- LCC-CNRS, Université de Toulouse, CNRS, UPS, 205 route de Narbonne, BP44099, 31077, Toulouse cedex 4, France
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11
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Takebayashi S, Ariai J, Gellrich U, Kartashov SV, Fayzullin RR, Kang HB, Yamane T, Sugisaki K, Sato K. Synthesis and characterization of a formal 21-electron cobaltocene derivative. Nat Commun 2023; 14:4979. [PMID: 37669936 PMCID: PMC10480225 DOI: 10.1038/s41467-023-40557-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Accepted: 08/01/2023] [Indexed: 09/07/2023] Open
Abstract
Metallocenes are highly versatile organometallic compounds. The versatility of the metallocenes stems from their ability to stabilize a wide range of formal electron counts. To date, d-block metallocenes with an electron count of up to 20 have been synthesized and utilized in catalysis, sensing, and other fields. However, d-block metallocenes with more than formal 20-electron counts have remained elusive. The synthesis and isolation of such complexes are challenging because the metal-carbon bonds in d-block metallocenes become weaker with increasing deviation from the stable 18-electron configuration. Here, we report the synthesis, isolation, and characterization of a 21-electron cobaltocene derivative. This discovery is based on the ligand design that allows the coordination of an electron pair donor to a 19-electron cobaltocene derivative while maintaining the cobalt-carbon bonds, a previously unexplored synthetic approach. Furthermore, we elucidate the origin of the stability, redox chemistry, and spin state of the 21-electron complex. This study reveals a synthetic method, structure, chemical bonding, and properties of the 21-electron metallocene derivative that expands our conceptual understanding of d-block metallocene chemistry. We expect that this report will open up previously unexplored synthetic possibilities in d-block transition metal chemistry, including the fields of catalysis and materials chemistry.
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Affiliation(s)
- Satoshi Takebayashi
- Science and Technology Group, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna-son, Okinawa, 904-0495, Japan.
| | - Jama Ariai
- Institute of Organic Chemistry, Justus Liebig University Giessen, Heinrich-Buff-Ring 17, Giessen, D-35392, Germany
| | - Urs Gellrich
- Institute of Organic Chemistry, Justus Liebig University Giessen, Heinrich-Buff-Ring 17, Giessen, D-35392, Germany.
| | - Sergey V Kartashov
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, 8 Arbuzov Street, Kazan, 420088, Russian Federation
| | - Robert R Fayzullin
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center, Russian Academy of Sciences, 8 Arbuzov Street, Kazan, 420088, Russian Federation.
| | - Hyung-Been Kang
- Engineering Section, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna-son, Okinawa, 904-0495, Japan
| | - Takeshi Yamane
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka, 558-8585, Japan
| | - Kenji Sugisaki
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka, 558-8585, Japan
- JST PRESTO, 4-1-8 Honcho, Kawaguchi, Saitama, 332-0012, Japan
- Graduate School of Science and Technology, Keio University, 7-1 Shinkawasaki, Saiwai-ku, Kawasaki, Kanagawa, 212-0032, Japan
- Quantum Computing Center, Keio University, 3-14-1 Hiyoshi, Kohoku-ku, Yokohama, Kanagawa, 223-8522, Japan
| | - Kazunobu Sato
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka, 558-8585, Japan
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12
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Resendiz-Lara DA, Rosas-Sánchez A, Hashizume D, Barquera-Lozada JE, Toscano RA, López-Cortés JG, Ortega-Alfaro MC. Synthesis of (μ 2,η 3-allyl-η 5-oxapentadienyl)diiron pentacarbonyl complexes, an unusual reaction product from η 4-(vinylketene)Fe(CO) 3 complexes: structure and electron density distribution analysis. Dalton Trans 2023; 52:2722-2734. [PMID: 36748862 DOI: 10.1039/d2dt03700a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
The synthesis of a series of ferrocenylvinylketenes as stable η4-[Fe(CO)3] complexes (3a-f) was successfully accomplished through the reaction of η2-[Fe(CO)4] complexes under mild carbonylation conditions. The reactivity of 3a-f under thermal conditions afforded the unexpected formation of a novel family of (μ2,η3-allyl-η5-oxapentadienyl)diiron pentacarbonyl complexes 5a-f proposed to be formed by a sequence metathesis-haptotropic rearrangement between the starting η4-vinylketene iron(0) complex 3 and a η4-vinylcarbene iron(0) complex trapped in situ after a reversible carbonylation process favored by the thermal conditions. An electron density distribution analysis (EDD) of 5e using high-resolution X-ray diffraction data in combination with the DFT framework was performed to understand the electronic communication between the two iron fragments.
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Affiliation(s)
- Diego A Resendiz-Lara
- Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de México, Circuito Exterior, Ciudad Universitaria, Coyoacán, C.P. 04510 Cd. México, Mexico.
| | - Alfredo Rosas-Sánchez
- Departamento de Química, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, Blvd. Marcelino García Barragán #1421, esq. Olímpica, C.P. 44430, Guadalajara, Jalisco, Mexico.,RIKEN Center for Emergent Matter Science (CEMS), 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Daisuke Hashizume
- RIKEN Center for Emergent Matter Science (CEMS), 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - José E Barquera-Lozada
- Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior, Ciudad Universitaria, Coyoacán, C.P. 04510 Cd. México, Mexico
| | - R Alfredo Toscano
- Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior, Ciudad Universitaria, Coyoacán, C.P. 04510 Cd. México, Mexico
| | - José G López-Cortés
- Instituto de Química, Universidad Nacional Autónoma de México, Circuito Exterior, Ciudad Universitaria, Coyoacán, C.P. 04510 Cd. México, Mexico
| | - M Carmen Ortega-Alfaro
- Instituto de Ciencias Nucleares, Universidad Nacional Autónoma de México, Circuito Exterior, Ciudad Universitaria, Coyoacán, C.P. 04510 Cd. México, Mexico.
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13
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Oliveira BGD. Why much of Chemistry may be indisputably non-bonded? SEMINA: CIÊNCIAS EXATAS E TECNOLÓGICAS 2023. [DOI: 10.5433/1679-0375.2022v43n2p211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023] Open
Abstract
In this compendium, the wide scope of all intermolecular interactions ever known has been revisited, in particular giving emphasis the capability of much of the elements of the periodic table to form non-covalent contacts. Either hydrogen bonds, dihydrogen bonds, halogen bonds, pnictogen bonds, chalcogen bonds, triel bonds, tetrel bonds, regium bonds, spodium bonds or even the aerogen bond interactions may be cited. Obviously that experimental techniques have been used in some works, but it was through the theoretical methods that these interactions were validate, wherein the QTAIM integrations and SAPT energy partitions have been useful in this regard. Therefore, the great goal concerns to elucidate the interaction strength and if the intermolecular system shall be total, partial or non-covalently bonded, wherein this last one encompasses the most majority of the intermolecular interactions what leading to affirm that chemistry is debatably non-bonded.
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14
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Unraveling the electronic influence and nature of covalent bonding of aryl and alkyl radicals on the B 12N 12 nanocage cluster. Sci Rep 2023; 13:752. [PMID: 36641508 PMCID: PMC9840632 DOI: 10.1038/s41598-023-28055-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2022] [Accepted: 01/12/2023] [Indexed: 01/15/2023] Open
Abstract
Carbon nanocage structures such as fullerene, nanotubes, nanocapsules, nanopolyhedra, cones, cubes, and onions have been reported since the discovery of C60, and they offer tremendous promise for investigating materials of low dimensions in an isolated environment. Boron Nitride (BN) nanomaterials such a: nanotubes, nanocapsules, nanoparticles, and clusters have been described in several studies and are predicted to be useful as electronic devices, high heat-resistance semiconductors, nanocables, insulator lubricants, and gas storage materials. The interaction, and electronic of octahedral B12N12 nanocage cluster covalently modified from the attachment of alkyl and aryl radicals were analyzed using Density Functional Theory calculations. The work discusses for the first time to our knowledge the complete investigation of the impact of the grafted aryl and alkyl groups on the electronic, bang gap, and density of states on the B12N12. Furthermore, this is the first complete description of these radicals attaching to a surface of B12N12 nanocage cluster.
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15
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Poddel’sky AI, Fukin GK, Baranov EV. Triphenylantimony(V) Complexes Based on o-Aminophenols with the Ambivalent N-Aryl Group. RUSS J COORD CHEM+ 2022. [DOI: 10.1134/s1070328422700166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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16
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Hall PD, Stevens MA, Wang JYJ, Pham LN, Coote ML, Colebatch AL. Copper and Zinc Complexes of 2,7-Bis(6-methyl-2-pyridyl)-1,8-naphthyridine─A Redox-Active, Dinucleating Bis(bipyridine) Ligand. Inorg Chem 2022; 61:19333-19343. [DOI: 10.1021/acs.inorgchem.2c03126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Peter D. Hall
- Research School of Chemistry, Australian National University, Canberra, Australian Capital Territory2601, Australia
| | - Michael A. Stevens
- Research School of Chemistry, Australian National University, Canberra, Australian Capital Territory2601, Australia
| | - Jiao Yu J. Wang
- Research School of Chemistry, Australian National University, Canberra, Australian Capital Territory2601, Australia
| | - Le Nhan Pham
- Institute for Nanoscale Science & Technology, Flinders University, Adelaide, South Australia5042, Australia
| | - Michelle L. Coote
- Institute for Nanoscale Science & Technology, Flinders University, Adelaide, South Australia5042, Australia
| | - Annie L. Colebatch
- Research School of Chemistry, Australian National University, Canberra, Australian Capital Territory2601, Australia
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17
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Gallegos M, Barrena-Espés D, Guevara-Vela JM, Rocha-Rinza T, Pendás ÁM. A QCT View of the Interplay between Hydrogen Bonds and Aromaticity in Small CHON Derivatives. Molecules 2022; 27:6039. [PMID: 36144774 PMCID: PMC9504421 DOI: 10.3390/molecules27186039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2022] [Revised: 09/07/2022] [Accepted: 09/13/2022] [Indexed: 11/18/2022] Open
Abstract
The somewhat elusive concept of aromaticity plays an undeniable role in the chemical narrative, often being considered the principal cause of the unusual properties and stability exhibited by certain π skeletons. More recently, the concept of aromaticity has also been utilised to explain the modulation of the strength of non-covalent interactions (NCIs), such as hydrogen bonding (HB), paving the way towards the in silico prediction and design of tailor-made interacting systems. In this work, we try to shed light on this area by exploiting real space techniques, such as the Quantum Theory of Atoms in Molecules (QTAIM), the Interacting Quantum Atoms (IQA) approaches along with the electron delocalisation indicators Aromatic Fluctuation (FLU) and Multicenter (MCI) indices. The QTAIM and IQA methods have been proven capable of providing an unbiased and rigorous picture of NCIs in a wide variety of scenarios, whereas the FLU and MCI descriptors have been successfully exploited in the study of diverse aromatic and antiaromatic systems. We used a collection of simple archetypal examples of aromatic, non-aromatic and antiaromatic moieties within organic molecules to examine the changes in π delocalisation and aromaticity induced by the Aromaticity and Antiaromaticity Modulated Hydrogen Bonds (AMHB). We observed fundamental differences in the behaviour of systems containing the HB acceptor within and outside the ring, e.g., a destabilisation of the rings in the former as opposed to a stabilisation of the latter upon the formation of the corresponding molecular clusters. The results of this work provide a physically sound basis to rationalise the strengthening and weakening of AMHBs with respect to suitable non-cyclic non-aromatic references. We also found significant differences in the chemical bonding scenarios of aromatic and antiaromatic systems in the formation of AMHB. Altogether, our investigation provide novel, valuable insights about the complex mutual influence between hydrogen bonds and π systems.
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Affiliation(s)
- Miguel Gallegos
- Department of Analytical and Physical Chemistry, University of Oviedo, 33006 Oviedo, Spain
| | - Daniel Barrena-Espés
- Department of Analytical and Physical Chemistry, University of Oviedo, 33006 Oviedo, Spain
| | - José Manuel Guevara-Vela
- Institute of Chemistry, National Autonomous University of Mexico, Circuito Exterior, Ciudad Universitaria, Delegación Coyoacán, Mexico City C.P. 04510, Mexico
| | - Tomás Rocha-Rinza
- Institute of Chemistry, National Autonomous University of Mexico, Circuito Exterior, Ciudad Universitaria, Delegación Coyoacán, Mexico City C.P. 04510, Mexico
| | - Ángel Martín Pendás
- Department of Analytical and Physical Chemistry, University of Oviedo, 33006 Oviedo, Spain
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18
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Rae A, Byrne KM, Brown SA, Kennedy AR, Krämer T, Mulvey RE, Robertson SD. Sigma/pi Bonding Preferences of Solvated Alkali-Metal Cations to Ditopic Arylmethyl Anions. Chemistry 2022; 28:e202104260. [PMID: 35170823 PMCID: PMC9310864 DOI: 10.1002/chem.202104260] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Indexed: 12/14/2022]
Abstract
Arylmethyl anions allow alkali-metals to bind in a σ-fashion to the lateral carbanionic centre or a π-fashion to the aryl ring or in between these extremities, with the trend towards π bonding increasing on descending group 1. Here we review known alkali metal structures of diphenylmethane, fluorene, 2-benzylpyridine and 4-benzylpyridine. Next, we synthesise Li, Na, K monomers of these diarylmethyls using polydentate donors PMDETA or Me6 TREN to remove competing oligomerizing interactions, studying the effect that two aromatic rings has on negative charge (de)localisation via NMR, X-ray crystallographic and DFT studies. Diphenylmethyl and fluorenyl anions maintain C(H)-M interactions regardless of alkali-metal, although the adjacent arene carbons engage in interactions with larger alkali-metals. Introducing a nitrogen atom into the ring (at the 2- or 4-position) encourages relocalisation of negative charge away from the deprotonated carbon and onto nitrogen. Phenyl(2-pyridyl)methyl moves from an enamide formation at one extremity (lithium) to an aza-allyl formation at the other extremity (potassium), while C- or N-coordination modes become energetically viable for Na and K phenyl(4-pyridyl)methyl complexes.
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Affiliation(s)
- Annabel Rae
- WestCHEM, Department of Pure and Applied ChemistryUniversity of Strathclyde295 Cathedral StreetGlasgowG1 1XLUK
| | - Keelan M. Byrne
- Department of ChemistryMaynooth UniversityW23 F2H6Maynooth, Co KildareIreland
| | - Scott A. Brown
- WestCHEM, Department of Pure and Applied ChemistryUniversity of Strathclyde295 Cathedral StreetGlasgowG1 1XLUK
| | - Alan R. Kennedy
- WestCHEM, Department of Pure and Applied ChemistryUniversity of Strathclyde295 Cathedral StreetGlasgowG1 1XLUK
| | - Tobias Krämer
- Department of ChemistryMaynooth UniversityW23 F2H6Maynooth, Co KildareIreland
- Hamilton InstituteMaynooth UniversityW23 A3HYMaynooth, Co KildareIreland
| | - Robert E. Mulvey
- WestCHEM, Department of Pure and Applied ChemistryUniversity of Strathclyde295 Cathedral StreetGlasgowG1 1XLUK
| | - Stuart D. Robertson
- WestCHEM, Department of Pure and Applied ChemistryUniversity of Strathclyde295 Cathedral StreetGlasgowG1 1XLUK
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19
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Mamane V, Weiss R, Cornaton Y, Khartabil H, Groslambert L, Hénon E, Pale P, Djukic JP. Deciphering the Role of Noncovalent Interactions in the Conformations of Dibenzo‐1,5‐dichalcogenocines. Chempluschem 2022; 87:e202100518. [DOI: 10.1002/cplu.202100518] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Revised: 01/03/2022] [Indexed: 11/07/2022]
Affiliation(s)
- Victor Mamane
- University of Strasbourg: Universite de Strasbourg Institut of Chemistry 1 Rue Blaise Pascal 67008 Strasbourg FRANCE
| | - Robin Weiss
- Université de Strasbourg: Universite de Strasbourg Institut de Chimie de Strasbourg FRANCE
| | - Yann Cornaton
- Université de Strasbourg: Universite de Strasbourg Institut de Chimie de Strasbroug FRANCE
| | - Hassan Khartabil
- Université de Reims Champagne-Ardenne: Universite de Reims Champagne-Ardenne Institut de Chimie Moléculaire FRANCE
| | - Loïc Groslambert
- Universite de Strasbourg Institut de Chimie de Strasbourg FRANCE
| | - Eric Hénon
- Universite de Reims Champagne-Ardenne Institut de Chimie Moléculaire FRANCE
| | - Patrick Pale
- Universite de Strasbourg Institut de Cimie de Strasbourg FRANCE
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20
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Matczak P, Kupfer S, Mlostoń G, Buday P, Görls H, Weigand W. Metal–ligand bonding in tricarbonyliron(0) complexes bearing thiochalcone ligands. NEW J CHEM 2022. [DOI: 10.1039/d2nj01315k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Bonding interactions between iron and thiochalcones in a series of recently synthesized complexes were analyzed using various theoretical methods.
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Affiliation(s)
- Piotr Matczak
- Department of Physical Chemistry, Faculty of Chemistry, University of Lodz, Pomorska 163/165, 90236 Lodz, Poland
| | - Stephan Kupfer
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
| | - Grzegorz Mlostoń
- Department of Organic and Applied Chemistry, Faculty of Chemistry, University of Lodz, Tamka 12, 91403 Lodz, Poland
| | - Philipp Buday
- Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Humboldtstrasse 8, 07743 Jena, Germany
| | - Helmar Görls
- Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Humboldtstrasse 8, 07743 Jena, Germany
| | - Wolfgang Weigand
- Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Humboldtstrasse 8, 07743 Jena, Germany
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21
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Guzmán‐Espinoza CV, Ledesma‐Olvera LG, Barquera‐Lozada JE. Effect of Spectator Ligands on Haptotropic Rearrangements of Metal‐Azulene Complexes. Eur J Inorg Chem 2021. [DOI: 10.1002/ejic.202100669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Carlos Víctor Guzmán‐Espinoza
- Instituto de Química Universidad Nacional Autónoma de México Circuito Exterior s/n, Ciudad Universitaria, Cd. Mx. 04510 México
| | - Lydia Gabriela Ledesma‐Olvera
- Instituto de Química Universidad Nacional Autónoma de México Circuito Exterior s/n, Ciudad Universitaria, Cd. Mx. 04510 México
| | - José Enrique Barquera‐Lozada
- Instituto de Química Universidad Nacional Autónoma de México Circuito Exterior s/n, Ciudad Universitaria, Cd. Mx. 04510 México
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22
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Miloserdov FM, Pécharman AF, Sotorrios L, Rajabi NA, Lowe JP, Macgregor SA, Mahon MF, Whittlesey MK. Bonding and Reactivity of a Pair of Neutral and Cationic Heterobimetallic RuZn 2 Complexes. Inorg Chem 2021; 60:16256-16265. [PMID: 34661399 PMCID: PMC8730504 DOI: 10.1021/acs.inorgchem.1c02072] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2021] [Indexed: 01/15/2023]
Abstract
A combined experimental and computational study of the structure and reactivity of two [RuZn2Me2] complexes, neutral [Ru(PPh3)(Ph2PC6H4)2(ZnMe)2] (2) and cationic [Ru(PPh3)2(Ph2PC6H4)(ZnMe)2][BArF4] ([BArF4] = [B{3,5-(CF3)2C6H3}4]) (3), is presented. Structural and computational analyses indicate these complexes are best formulated as containing discrete ZnMe ligands in which direct Ru-Zn bonding is complemented by weaker Zn···Zn interactions. The latter are stronger in 2, and both complexes exhibit an additional Zn···Caryl interaction with a cyclometalated phosphine ligand, this being stronger in 3. Both 2 and 3 show diverse reactivity under thermolysis and with Lewis bases (PnBu3, PCy3, and IMes). With 3, all three Lewis bases result in the loss of [ZnMe]+. In contrast, 2 undergoes PPh3 substitution with PnBu3, but with IMes, loss of ZnMe2 occurs to form [Ru(PPh3)(C6H4PPh2)(C6H4PPhC6H4Zn(IMes))H] (7). The reaction of 3 with H2 affords the cationic trihydride complex [Ru(PPh3)2(ZnMe)2(H)3][BArF4] (12). Computational analyses indicate that both 12 and 7 feature bridging hydrides that are biased toward Ru over Zn.
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Affiliation(s)
- Fedor M. Miloserdov
- Department
of Chemistry, University of Bath, Bath BA2 7AY, U.K.
- Laboratory
of Organic Chemistry, Wageningen University, Stippeneng 4, Wageningen 6708, WE, The Netherlands
| | | | - Lia Sotorrios
- Institute
of Chemical Sciences, School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh EH14 4AS, U.K.
| | - Nasir A. Rajabi
- Institute
of Chemical Sciences, School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh EH14 4AS, U.K.
| | - John P. Lowe
- Department
of Chemistry, University of Bath, Bath BA2 7AY, U.K.
| | - Stuart A. Macgregor
- Institute
of Chemical Sciences, School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh EH14 4AS, U.K.
| | - Mary F. Mahon
- Department
of Chemistry, University of Bath, Bath BA2 7AY, U.K.
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23
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Pinto CB, Rodrigues BL, Dos Santos LHR. Estimating electron density at the bond critical point through atomic Hirshfeld surfaces. J Appl Crystallogr 2021. [DOI: 10.1107/s1600576721009213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
Interatomic surfaces often carry information related to the electron distribution in a molecule or crystal, not only being a visual aid but also enabling quantitative analyses. Under certain conditions, atomic Hirshfeld surfaces present a high resemblance to the interatomic surfaces obtained through the quantum theory of atoms in molecules (QTAIM), with the advantage of being easily calculated, even for crystal structures determined at low resolutions (i.e. when a charge-density refinement is not performed). Here an empirical relation between the curvedness property of the Hirshfeld surfaces and the electron density at the bond critical point for certain types of covalent and coordination interactions involving carbon atoms has been obtained. The exponential function was tested to estimate the electron density in different crystalline systems, and the highest deviation from reference values obtained through QTAIM was just 16%. Additionally, fine details of this fit may be salient to the difference in electronegativity of the atoms involved in the bond.
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24
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Caballero‐Muñoz A, Guevara‐Vela JM, Fernández‐Alarcón A, Valentín‐Rodríguez MA, Flores‐Álamo M, Rocha‐Rinza T, Torrens H, Moreno‐Alcántar G. Structural Diversity and Argentophilic Interactions in Small Phosphine Silver(I) Thiolate Clusters. Eur J Inorg Chem 2021. [DOI: 10.1002/ejic.202100336] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Alejandra Caballero‐Muñoz
- Facultad de Química Universidad Nacional Autónoma de México Ciudad Universitaria 04510 Coyoacán México
| | - José Manuel Guevara‐Vela
- Instituto de Química Universidad Nacional Autónoma de México Ciudad Universitaria 04510 Coyoacán México
| | - Alberto Fernández‐Alarcón
- Instituto de Química Universidad Nacional Autónoma de México Ciudad Universitaria 04510 Coyoacán México
| | - Mónica A. Valentín‐Rodríguez
- Instituto de Física Fundamental Consejo Superior de Investigaciones Científicas (IFF-CSIC) Serrano 123 28006 Madrid Spain
| | - Marcos Flores‐Álamo
- Facultad de Química Universidad Nacional Autónoma de México Ciudad Universitaria 04510 Coyoacán México
| | - Tomás Rocha‐Rinza
- Instituto de Química Universidad Nacional Autónoma de México Ciudad Universitaria 04510 Coyoacán México
| | - Hugo Torrens
- Facultad de Química Universidad Nacional Autónoma de México Ciudad Universitaria 04510 Coyoacán México
| | - Guillermo Moreno‐Alcántar
- Facultad de Química Universidad Nacional Autónoma de México Ciudad Universitaria 04510 Coyoacán México
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25
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Pawlędzio S, Malinska M, Woińska M, Wojciechowski J, Andrade Malaspina L, Kleemiss F, Grabowsky S, Woźniak K. Relativistic Hirshfeld atom refinement of an organo-gold(I) compound. IUCRJ 2021; 8:608-620. [PMID: 34258009 PMCID: PMC8256711 DOI: 10.1107/s2052252521004541] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 04/28/2021] [Indexed: 06/13/2023]
Abstract
The main goal of this study is the validation of relativistic Hirshfeld atom refinement (HAR) as implemented in Tonto for high-resolution X-ray diffraction datasets of an organo-gold(I) compound. The influence of the relativistic effects on statistical parameters, geometries and electron density properties was analyzed and compared with the influence of electron correlation and anharmonic atomic motions. Recent work in this field has indicated the importance of relativistic effects in the static electron density distribution of organo-mercury compounds. This study confirms that differences in electron density due to relativistic effects are also of significant magnitude for organo-gold compounds. Relativistic effects dominate not only the core region of the gold atom, but also influence the electron density in the valence and bonding region, which has measurable consequences for the HAR refinement model parameters. To study the effects of anharmonic motion on the electron density distribution, dynamic electron density difference maps were constructed. Unlike relativistic and electron correlation effects, the effects of anharmonic nuclear motion are mostly observed in the core area of the gold atom.
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Affiliation(s)
- Sylwia Pawlędzio
- Biological and Chemical Research Centre, Department of Chemistry, University of Warsaw, Żwirki i Wigury 101, Warszawa 02-089, Poland
| | - Maura Malinska
- Biological and Chemical Research Centre, Department of Chemistry, University of Warsaw, Żwirki i Wigury 101, Warszawa 02-089, Poland
| | - Magdalena Woińska
- Biological and Chemical Research Centre, Department of Chemistry, University of Warsaw, Żwirki i Wigury 101, Warszawa 02-089, Poland
| | | | - Lorraine Andrade Malaspina
- Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
| | - Florian Kleemiss
- Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
| | - Simon Grabowsky
- Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
| | - Krzysztof Woźniak
- Biological and Chemical Research Centre, Department of Chemistry, University of Warsaw, Żwirki i Wigury 101, Warszawa 02-089, Poland
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26
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Furan S, Vogt M, Winkels K, Lork E, Mebs S, Hupf E, Beckmann J. (6-Diphenylphosphinoacenaphth-5-yl)indium and -nickel Compounds: Synthesis, Structure, Transmetalation, and Cross-Coupling Reactions. Organometallics 2021. [DOI: 10.1021/acs.organomet.1c00078] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Sinas Furan
- Institut für Anorganische Chemie und Kristallographie, Universität Bremen, Leobener Straße 7, 28359 Bremen, Germany
| | - Matthias Vogt
- Institut für Anorganische Chemie und Kristallographie, Universität Bremen, Leobener Straße 7, 28359 Bremen, Germany
- Institut für Chemie. Fakultät für Naturwissenschaften II, Martin Luther Universität Halle-Wittenberg, Kurt Mothes Str. 2, 06120 Halle (Saale), Germany
| | - Konrad Winkels
- Institut für Anorganische Chemie und Kristallographie, Universität Bremen, Leobener Straße 7, 28359 Bremen, Germany
| | - Enno Lork
- Institut für Anorganische Chemie und Kristallographie, Universität Bremen, Leobener Straße 7, 28359 Bremen, Germany
| | - Stefan Mebs
- Institut für Experimentalphysik, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Emanuel Hupf
- Institut für Anorganische Chemie und Kristallographie, Universität Bremen, Leobener Straße 7, 28359 Bremen, Germany
| | - Jens Beckmann
- Institut für Anorganische Chemie und Kristallographie, Universität Bremen, Leobener Straße 7, 28359 Bremen, Germany
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27
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Density functional theory study of the interplay between cation–π and intramolecular hydrogen bonding interactions in complexes involving methyl salicylate with Li+, Na+, K+, Be2+, Mg2+, Ca2+ cations. COMPUT THEOR CHEM 2021. [DOI: 10.1016/j.comptc.2021.113172] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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28
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Fukin GK, Cherkasov AV. Experimental, experimental–theoretical and theoretical estimates of intermolecular interaction energies in η6-[(5-methyl-1,3-oxazolidin-3-yl)benzene]tricarbonylchromium(0). MENDELEEV COMMUNICATIONS 2021. [DOI: 10.1016/j.mencom.2021.03.012] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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29
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30
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Experimental distribution of electron density in crystals of Ph3Sb(O2CCH=CH–CH=CH–CH3)2 complex: the selection of a reference point for the source function in the absence of a bond critical point between atoms. Struct Chem 2020. [DOI: 10.1007/s11224-020-01548-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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31
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32
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Silantyeva LI, Ilichev VA, Shavyrin AS, Yablonskiy AN, Rumyantcev RV, Fukin GK, Bochkarev MN. Unexpected Findings in a Simple Metathesis Reaction of Europium and Ytterbium Diiodides with Perfluorinated Mercaptobenzothiazolates of Alkali Metals. Organometallics 2020. [DOI: 10.1021/acs.organomet.0c00334] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Liubov I. Silantyeva
- G. A. Razuvaev Institute of Organometallic Chemistry of Russian Academy of Sciences, Tropinina 49, 603950 Nizhny Novgorod, Russian Federation
| | - Vasily A. Ilichev
- G. A. Razuvaev Institute of Organometallic Chemistry of Russian Academy of Sciences, Tropinina 49, 603950 Nizhny Novgorod, Russian Federation
| | - Andrey S. Shavyrin
- G. A. Razuvaev Institute of Organometallic Chemistry of Russian Academy of Sciences, Tropinina 49, 603950 Nizhny Novgorod, Russian Federation
| | - Artem N. Yablonskiy
- Institute for Physics of Microstructures of Russian Academy of Sciences, 7 ul. Akademicheskaya, 603950 Nizhny Novgorod, Russian Federation
| | - Roman V. Rumyantcev
- G. A. Razuvaev Institute of Organometallic Chemistry of Russian Academy of Sciences, Tropinina 49, 603950 Nizhny Novgorod, Russian Federation
| | - Georgy K. Fukin
- G. A. Razuvaev Institute of Organometallic Chemistry of Russian Academy of Sciences, Tropinina 49, 603950 Nizhny Novgorod, Russian Federation
| | - Mikhail N. Bochkarev
- G. A. Razuvaev Institute of Organometallic Chemistry of Russian Academy of Sciences, Tropinina 49, 603950 Nizhny Novgorod, Russian Federation
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33
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Moreno-Alcántar G, Turcio-García L, Guevara-Vela JM, Romero-Montalvo E, Rocha-Rinza T, Pendás ÁM, Flores-Álamo M, Torrens H. Directing the Crystal Packing in Triphenylphosphine Gold(I) Thiolates by Ligand Fluorination. Inorg Chem 2020; 59:8667-8677. [PMID: 32551606 DOI: 10.1021/acs.inorgchem.9b03131] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
We explore herein the supramolecular interactions that control the crystalline packing in a series of fluorothiolate triphenylphosphine gold(I) compounds with the general formula [Au(SRF)(Ph3P)] in which Ph3P = triphenylphosphine and SRF = SC6F5, SC6HF4-4, SC6F4(CF3)-4, SC6H3F2-2,4, SC6H3F2-3,4, SC6H3F2-3,5, SC6H4(CF3)-2, SC6H4F-2, SC6H4F-3, SC6H4F-4, SCF3, and SCH2CF3. We use for this purpose (i) DFT electronic structure calculations and (ii) the quantum theory of atoms in molecules and the non-covalent interactions index methods of wave function analyses. Our combined experimental and computational approach yields a general understanding of the effects of ligand fluorination in the crystalline self-assembly of the examined systems, in particular, about the relative force of aurophilic contacts compared with other supramolecular interactions. We expect this information to be useful in the design of materials based on gold coordination compounds.
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Affiliation(s)
- Guillermo Moreno-Alcántar
- School of Chemistry, National Autonomous University of Mexico, Circuito Escolar, Ciudad Universitaria, Coyoacán, 04510 Mexico City, Mexico.,Institut de Science et d' Ingénierie Supramoléculaires (ISIS), University of Strasbourg, 8 alleé Gaspard Monge, 67000, Strasbourg, France
| | - Luis Turcio-García
- School of Chemistry, National Autonomous University of Mexico, Circuito Escolar, Ciudad Universitaria, Coyoacán, 04510 Mexico City, Mexico
| | - José M Guevara-Vela
- Institute of Chemistry, National Autonomous University of Mexico, Circuito Exterior, Ciudad Universitaria, Coyoacán, 04510, Mexico City, Mexico
| | - Eduardo Romero-Montalvo
- Institute of Chemistry, National Autonomous University of Mexico, Circuito Exterior, Ciudad Universitaria, Coyoacán, 04510, Mexico City, Mexico
| | - Tomás Rocha-Rinza
- Institute of Chemistry, National Autonomous University of Mexico, Circuito Exterior, Ciudad Universitaria, Coyoacán, 04510, Mexico City, Mexico
| | - Ángel Martín Pendás
- Department of Analytical and Physical Chemistry, University of Oviedo, E-33006, Julián Clavería, 8, 33006, Oviedo, Spain
| | - Marcos Flores-Álamo
- School of Chemistry, National Autonomous University of Mexico, Circuito Escolar, Ciudad Universitaria, Coyoacán, 04510 Mexico City, Mexico
| | - Hugo Torrens
- School of Chemistry, National Autonomous University of Mexico, Circuito Escolar, Ciudad Universitaria, Coyoacán, 04510 Mexico City, Mexico
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34
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Pilmé J. Quantum chemical topology from tight augmented core densities. J Comput Chem 2020; 41:1616-1627. [DOI: 10.1002/jcc.26204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2019] [Revised: 03/22/2020] [Accepted: 03/24/2020] [Indexed: 11/09/2022]
Affiliation(s)
- Julien Pilmé
- Sorbonne Université, CNRS; Laboratoire de Chimie Théorique; CC 137 - 4, place Jussieu F. 75252 PARIS CEDEX 05 France
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35
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Two octahedral σ-borane metal (MnI and RuII) complexes containing a tripod κ3N,H,H-ligand: Synthesis, structural characterization, and theoretical topological study of the charge density. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127217] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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36
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Olaru M, Mischin A, Malaspina LA, Mebs S, Beckmann J. Das Bis(ferrocenyl)phosphenium‐Ion im neuen Licht betrachtet. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201913081] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Marian Olaru
- Institut für Anorganische Chemie und Kristallographie Universität Bremen Leobener Straße 7 28359 Bremen Deutschland
| | - Alexandra Mischin
- Institut für Anorganische Chemie und Kristallographie Universität Bremen Leobener Straße 7 28359 Bremen Deutschland
| | - Lorraine A. Malaspina
- Institut für Anorganische Chemie und Kristallographie Universität Bremen Leobener Straße 7 28359 Bremen Deutschland
| | - Stefan Mebs
- Institut für Experimentalphysik Freie Universität Berlin Arnimallee 14 14195 Berlin Deutschland
| | - Jens Beckmann
- Institut für Anorganische Chemie und Kristallographie Universität Bremen Leobener Straße 7 28359 Bremen Deutschland
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37
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Olaru M, Mischin A, Malaspina LA, Mebs S, Beckmann J. The Bis(ferrocenyl)phosphenium Ion Revisited. Angew Chem Int Ed Engl 2019; 59:1581-1584. [PMID: 31751492 PMCID: PMC7003730 DOI: 10.1002/anie.201913081] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2019] [Indexed: 11/09/2022]
Abstract
The bis(ferrocenyl)phosphenium ion, [Fc2P]+, reported by Cowley et al. (J. Am. Chem. Soc. 1981, 103, 714–715), was the only claimed donor‐free divalent phosphenium ion. Our examination of the molecular and electronic structure reveals that [Fc2P]+ possesses significant intramolecular Fe⋅⋅⋅P contacts, which are predominantly electrostatic and moderate the Lewis acidity. Nonetheless, [Fc2P]+ undergoes complex formation with the Lewis bases PPh3 and IPr to give the donor–acceptor complexes [Fc2P(PPh3)]+ and [Fc2P(IPr)]+ (IPr=1,3‐bis(2,6‐diisopropylphenyl)imidazole‐2‐ylidene).
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Affiliation(s)
- Marian Olaru
- Institut für Anorganische Chemie und Kristallographie, Universität Bremen, Leobener Straße 7, 28359, Bremen, Germany
| | - Alexandra Mischin
- Institut für Anorganische Chemie und Kristallographie, Universität Bremen, Leobener Straße 7, 28359, Bremen, Germany
| | - Lorraine A Malaspina
- Institut für Anorganische Chemie und Kristallographie, Universität Bremen, Leobener Straße 7, 28359, Bremen, Germany
| | - Stefan Mebs
- Institut für Experimentalphysik, Freie Universität Berlin, Arnimallee 14, 14195, Berlin, Germany
| | - Jens Beckmann
- Institut für Anorganische Chemie und Kristallographie, Universität Bremen, Leobener Straße 7, 28359, Bremen, Germany
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38
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Sindlinger CP, Ruth PN. A Neutral "Aluminocene" Sandwich Complex: η 1 - versus η 5 -Coordination Modes of a Pentaarylborole with ECp* (E=Al, Ga; Cp*=C 5 Me 5 ). Angew Chem Int Ed Engl 2019; 58:15051-15056. [PMID: 31390132 PMCID: PMC6856865 DOI: 10.1002/anie.201907749] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2019] [Indexed: 11/07/2022]
Abstract
The pentaaryl borole (Ph*C)4 BXylF [Ph*=3,5-tBu2 (C6 H3 ); XylF =3,5-(CF3 )2 (C6 H3 )] reacts with low-valent Group 13 precursors AlCp* and GaCp* by two divergent routes. In the case of [AlCp*]4 , the borole reacts as an oxidising agent and accepts two electrons. Structural, spectroscopic, and computational analysis of the resulting unprecedented neutral η5 -Cp*,η5 -[(Ph*C)4 BXylF ] complex of AlIII revealed a strong, ionic bonding interaction. The formation of the heteroleptic borole-cyclopentadienyl "aluminocene" leads to significant changes in the 13 C NMR chemical shifts within the borole unit. In the case of the less-reductive GaCp*, borole (Ph*C)4 BXylF reacts as a Lewis acid to form a dynamic adduct with a dative 2-center-2-electron Ga-B bond. The Lewis adduct was also studied structurally, spectroscopically, and computationally.
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Affiliation(s)
- Christian P Sindlinger
- Institut für Anorganische Chemie, Georg-August-Universität Göttingen, Tammannstrasse 4, 37077, Göttingen, Germany
| | - Paul Niklas Ruth
- Institut für Anorganische Chemie, Georg-August-Universität Göttingen, Tammannstrasse 4, 37077, Göttingen, Germany
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Fukin GK, Cherkasov AV, Baranov EV, Rumyantcev RV, Sazonova EV, Artemov AN. The Electron Density Distribution in Crystals of η
6
–[1,4–dihydrospiro(2
H
–3,1–benzoxazine–2,1′–cyclohexane)]tricarbonylchromium(0): Experiment
vs
Molecular Invariom. ChemistrySelect 2019. [DOI: 10.1002/slct.201901394] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Georgy K. Fukin
- G.A. Razuvaev Institute of Organometallic Chemistry of Russian Academy of Sciences Tropinina str., 49, Nizhny Novgorod 603137 Russian Federation
| | - Anton V. Cherkasov
- G.A. Razuvaev Institute of Organometallic Chemistry of Russian Academy of Sciences Tropinina str., 49, Nizhny Novgorod 603137 Russian Federation
| | - Evgeny V. Baranov
- G.A. Razuvaev Institute of Organometallic Chemistry of Russian Academy of Sciences Tropinina str., 49, Nizhny Novgorod 603137 Russian Federation
| | - Roman V. Rumyantcev
- G.A. Razuvaev Institute of Organometallic Chemistry of Russian Academy of Sciences Tropinina str., 49, Nizhny Novgorod 603137 Russian Federation
| | - Elena V. Sazonova
- Chemical DepartmentLobachevsky State University of Nizhny Novgorod Gagarina Pr., 23, Nizhny Novgorod 603950 Russian Federation
| | - Alexander N. Artemov
- Chemical DepartmentLobachevsky State University of Nizhny Novgorod Gagarina Pr., 23, Nizhny Novgorod 603950 Russian Federation
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40
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Fukin GK, Baranov EV, Cherkasov AV, Rumyantcev RV, Artemov AN, Sazonova EV. Comparison of Experimental and Experimental–Theoretical Topological Characteristics of the Electron Density in the Crystalline Complex η6-[3-Acetyltetrahydro-6-Phenyl-2Н-1,3-oxazine]tricarbonylchromium(0). RUSS J COORD CHEM+ 2019. [DOI: 10.1134/s1070328419090045] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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41
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Chromium carbonyl complexes with aryl mono- and oligogermanes: Ability for haptotropic rearrangement. J Organomet Chem 2019. [DOI: 10.1016/j.jorganchem.2019.07.012] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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42
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Sindlinger CP, Ruth PN. Ein neutraler “Aluminocen”‐Sandwich‐Komplex: η
1
‐ vs. η
5
‐Koordination eines Pentaarylborols mit ECp* (E=Al, Ga; Cp*=C
5
Me
5
). Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201907749] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Christian P. Sindlinger
- Institut für Anorganische Chemie Georg-August-Universität Göttingen Tammannstr. 4 37077 Göttingen Deutschland
| | - Paul Niklas Ruth
- Institut für Anorganische Chemie Georg-August-Universität Göttingen Tammannstr. 4 37077 Göttingen Deutschland
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43
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Artemov AN, Sazonova EV, Aksenova NA, Fukin GK, Cherkasov AV, Faerman VI, Grishina NY. Reaction of phenyl-containing N-substituted 1,3-oxazolidines and 1,3-oxazinanes with triammine(tricarbonyl)chromium. Russ Chem Bull 2019. [DOI: 10.1007/s11172-019-2590-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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44
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Korlyukov AA, Nelyubina YV. Quantum chemical methods in charge density studies from X-ray diffraction data. RUSSIAN CHEMICAL REVIEWS 2019. [DOI: 10.1070/rcr4866] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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45
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Fukin GK, Cherkasov AV, Rumyantcev RV, Grishina NY, Sazonova EV, Artemov AN, Stash AI. Experimental study of X-ray charge density and the selection of reference points for a source function in η6-(2-methyl-1,4-dihydro-2H-3,1-benzoxazine)tricarbonylchromium(0). MENDELEEV COMMUNICATIONS 2019. [DOI: 10.1016/j.mencom.2019.05.036] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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46
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Abstract
In addition to the underlying basic concepts and early recognition of halogen bonding, this paper reviews the conflicting views that consistently appear in the area of noncovalent interactions and the ability of covalently bonded halogen atoms in molecules to participate in noncovalent interactions that contribute to packing in the solid-state. It may be relatively straightforward to identify Type-II halogen bonding between atoms using the conceptual framework of σ-hole theory, especially when the interaction is linear and is formed between the axial positive region (σ-hole) on the halogen in one monomer and a negative site on a second interacting monomer. A σ-hole is an electron density deficient region on the halogen atom X opposite to the R–X covalent bond, where R is the remainder part of the molecule. However, it is not trivial to do so when secondary interactions are involved as the directionality of the interaction is significantly affected. We show, by providing some specific examples, that halogen bonds do not always follow the strict Type-II topology, and the occurrence of Type-I and -III halogen-centered contacts in crystals is very difficult to predict. In many instances, Type-I halogen-centered contacts appear simultaneously with Type-II halogen bonds. We employed the Independent Gradient Model, a recently proposed electron density approach for probing strong and weak interactions in molecular domains, to show that this is a very useful tool in unraveling the chemistry of halogen-assisted noncovalent interactions, especially in the weak bonding regime. Wherever possible, we have attempted to connect some of these results with those reported previously. Though useful for studying interactions of reasonable strength, IUPAC’s proposed “less than the sum of the van der Waals radii” criterion should not always be assumed as a necessary and sufficient feature to reveal weakly bound interactions, since in many crystals the attractive interaction happens to occur between the midpoint of a bond, or the junction region, and a positive or negative site.
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47
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Desnoyer AN, He W, Behyan S, Chiu W, Love JA, Kennepohl P. The Importance of Ligand-Induced Backdonation in the Stabilization of Square Planar d 10 Nickel π-Complexes. Chemistry 2019; 25:5259-5268. [PMID: 30693581 DOI: 10.1002/chem.201805987] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Indexed: 01/06/2023]
Abstract
The electronic nature of Ni π-complexes is underexplored even though these complexes have been widely postulated as intermediates in organometallic chemistry. Herein, the geometric and electronic structure of a series of nickel π-complexes, Ni(dtbpe)(X) (dtbpe=1,2-bis(di-tert-butyl)phosphinoethane; X=alkene or carbonyl containing π-ligands), is probed using a combination of 31 P NMR, Ni K-edge XAS, Ni Kβ XES, and DFT calculations. These complexes are best described as square planar d10 complexes with π-backbonding acting as the dominant contributor to M-L bonding to the π-ligand. The degree of backbonding correlates with 2 JPP from NMR and the energy of the Ni 1s→4pz pre-edge in the Ni K-edge XAS data, and is determined by the energy of the π*ip ligand acceptor orbital. Thus, unactivated olefinic ligands tend to be poor π-acids whereas ketones, aldehydes, and esters allow for greater backbonding. However, backbonding is still significant even in cases in which metal contributions are minor. In such cases, backbonding is dominated by charge donation from the diphosphine, which allows for strong backdonation, although the metal centre retains a formal d10 electronic configuration. This ligand-induced backbonding can be formally described as a 3-centre-4-electron (3c-4e) interaction, in which the nickel centre mediates charge transfer from the phosphine σ-donors to the π*ip ligand acceptor orbital. The implications of this bonding motif are described with respect to both structure and reactivity.
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Affiliation(s)
- Addison N Desnoyer
- Department of Chemistry, The University of British Columbia, 2036 Main Mall, V6T 1Z1, Vancouver, BC, Canada
| | - Weiying He
- Department of Chemistry, The University of British Columbia, 2036 Main Mall, V6T 1Z1, Vancouver, BC, Canada
| | - Shirin Behyan
- Department of Chemistry, The University of British Columbia, 2036 Main Mall, V6T 1Z1, Vancouver, BC, Canada
| | - Weiling Chiu
- Department of Chemistry, The University of British Columbia, 2036 Main Mall, V6T 1Z1, Vancouver, BC, Canada
| | - Jennifer A Love
- Department of Chemistry, The University of British Columbia, 2036 Main Mall, V6T 1Z1, Vancouver, BC, Canada
| | - Pierre Kennepohl
- Department of Chemistry, The University of British Columbia, 2036 Main Mall, V6T 1Z1, Vancouver, BC, Canada
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48
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Kenny A, Pisarello A, Bird A, Chirila PG, Hamilton A, Whiteoak CJ. A challenging redox neutral Cp*Co(III)-catalysed alkylation of acetanilides with 3-buten-2-one: synthesis and key insights into the mechanism through DFT calculations. Beilstein J Org Chem 2018; 14:2366-2374. [PMID: 30254701 PMCID: PMC6142744 DOI: 10.3762/bjoc.14.212] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2018] [Accepted: 08/23/2018] [Indexed: 11/23/2022] Open
Abstract
Traditional, established palladium cross-coupling procedures are widely applied in complex molecule synthesis; however, there is a significant disadvantage in the requirement for pre-functionalised substrates (commonly halides/triflates). Direct C–H activation protocols provide the opportunity for a novel approach to synthesis, although this field is still in its relative infancy and often transferability between substrate classes remains unresolved and limitations not fully understood. This study focuses on the translation of an established Cp*Co(III)-catalysed alkylation of benzamides to related acetanilides using 3-buten-2-one as coupling partner. The developed procedure provides a wide substrate scope in terms of substituted acetanilides, although the optimised conditions were found to be more forcing than those for the corresponding benzamide substrates. Interestingly, density functional theory (DFT) studies reveal that the major impediment in the mechanism is not the C–H activation step, but instead and unexpectedly, effective competition with more stable compounds (resting states) not involved in the catalytic cycle.
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Affiliation(s)
- Andrew Kenny
- Department of Biosciences and Chemistry, Sheffield Hallam University, Sheffield, S1 1WB, United Kingdom
| | - Alba Pisarello
- Department of Biosciences and Chemistry, Sheffield Hallam University, Sheffield, S1 1WB, United Kingdom
| | - Arron Bird
- Department of Biosciences and Chemistry, Sheffield Hallam University, Sheffield, S1 1WB, United Kingdom
| | - Paula G Chirila
- Department of Biosciences and Chemistry, Sheffield Hallam University, Sheffield, S1 1WB, United Kingdom
| | - Alex Hamilton
- Department of Biosciences and Chemistry, Sheffield Hallam University, Sheffield, S1 1WB, United Kingdom
| | - Christopher J Whiteoak
- Department of Biosciences and Chemistry, Sheffield Hallam University, Sheffield, S1 1WB, United Kingdom
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49
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The synthesis of new 1,3-oxazolidines and 1,3-oxazinanes containing (η6-arene)tricarbonylchromium group based on condensation between aldehydes and amino alcohols. Russ Chem Bull 2018. [DOI: 10.1007/s11172-018-2153-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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50
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Tomlinson WW, Morris D, Johnson C, Hooper JP. Topology and Equilibrium Analysis of the Monovalent Aluminum Compound Al 4
Cp* Ph
4. Z Anorg Allg Chem 2018. [DOI: 10.1002/zaac.201800135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Warren W. Tomlinson
- Department of Physics; Naval Postgraduate School; 1 University Circle 93943 Monterey CA USA
| | - David Morris
- Weapons Division; Naval Air Warfare Center; 1 Admin Circle 93555 China Lake CA USA
| | - Curtis Johnson
- Weapons Division; Naval Air Warfare Center; 1 Admin Circle 93555 China Lake CA USA
| | - Joseph P. Hooper
- Department of Physics; Naval Postgraduate School; 1 University Circle 93943 Monterey CA USA
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