1
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Wang Y, Su Y, Jia Y. Total Synthesis of (+)-Aberrarone. J Am Chem Soc 2023; 145:9459-9463. [PMID: 37084250 DOI: 10.1021/jacs.3c02511] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/22/2023]
Abstract
The structurally intriguing diterpene (+)-aberrarone has been assembled in only 12 steps from the commercially available (S,S)-carveol without protecting group manipulations. This concise synthesis features a Cu-catalyzed asymmetric hydroboration to generate the chiral methyl group, a Ni-catalyzed reductive coupling to link two fragments, and a Mn-mediated radical cascade cyclization to construct the triquinane system.
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Affiliation(s)
- Yang Wang
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, and Chemical Biology Center, Peking University, 38 Xueyuan Road, Beijing 100191, China
| | - Yongjian Su
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, and Chemical Biology Center, Peking University, 38 Xueyuan Road, Beijing 100191, China
| | - Yanxing Jia
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, and Chemical Biology Center, Peking University, 38 Xueyuan Road, Beijing 100191, China
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2
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Hai Y, Cai ZM, Li PJ, Wei MY, Wang CY, Gu YC, Shao CL. Trends of antimalarial marine natural products: progresses, challenges and opportunities. Nat Prod Rep 2022; 39:969-990. [DOI: 10.1039/d1np00075f] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
This review provides an overview of the antimalarial marine natural products, focusing on their chemistry, malaria-related targets and mechanisms, and highlighting their potential for drug development.
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Affiliation(s)
- Yang Hai
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
| | - Zi-Mu Cai
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
| | - Peng-Jie Li
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
| | - Mei-Yan Wei
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
- College of Food Science and Engineering, Ocean University of China, Qingdao, 266003, China
| | - Chang-Yun Wang
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao, 266237, China
| | - Yu-Cheng Gu
- Syngenta Jealott's Hill International Research Centre, Bracknell, Berkshire, RG42 6EY, UK
| | - Chang-Lun Shao
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao, 266237, China
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3
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Li G, Sun L, Dickschat JS, Guo Y. Klyflaccilins B‐T, Polyoxgenated Eunicellins from the Soft Coral
Klyxum flaccidum. European J Org Chem 2021. [DOI: 10.1002/ejoc.202001647] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Geng Li
- State Key Laboratory of Drug Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zu Chong Zhi Road, Zhangjiang Hi-Tech Park 201203 Shanghai China
- Kekulé-Institute of Organic Chemistry and Biochemistry University of Bonn Gerhard-Domagk-Strasse 1 53121 Bonn Germany
- University of Chinese Academy of Sciences No. 19 A Yuquan Road Beijing 100049 China
| | - Li‐Li Sun
- State Key Laboratory of Drug Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zu Chong Zhi Road, Zhangjiang Hi-Tech Park 201203 Shanghai China
- University of Chinese Academy of Sciences No. 19 A Yuquan Road Beijing 100049 China
| | - Jeroen S. Dickschat
- Kekulé-Institute of Organic Chemistry and Biochemistry University of Bonn Gerhard-Domagk-Strasse 1 53121 Bonn Germany
| | - Yue‐Wei Guo
- State Key Laboratory of Drug Research Shanghai Institute of Materia Medica Chinese Academy of Sciences 555 Zu Chong Zhi Road, Zhangjiang Hi-Tech Park 201203 Shanghai China
- University of Chinese Academy of Sciences No. 19 A Yuquan Road Beijing 100049 China
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4
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Costa FLP, de Albuquerque ACF, Fiorot RG, Lião LM, Martorano LH, Mota GVS, Valverde AL, Carneiro JWM, dos Santos Junior FM. Structural characterisation of natural products by means of quantum chemical calculations of NMR parameters: new insights. Org Chem Front 2021. [DOI: 10.1039/d1qo00034a] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
In this review, we focus in all aspects of NMR simulation of natural products, from the fundamentals to the new computational toolboxes available, combining advanced quantum chemical calculations with upstream data processing and machine learning.
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Affiliation(s)
| | - Ana C. F. de Albuquerque
- Departamento de Química Orgânica
- Instituto de Química
- Universidade Federal Fluminense
- Niterói-RJ
- Brazil
| | - Rodolfo G. Fiorot
- Departamento de Química Orgânica
- Instituto de Química
- Universidade Federal Fluminense
- Niterói-RJ
- Brazil
| | - Luciano M. Lião
- Instituto de Química
- Universidade Federal de Goiás
- 74690-900 Goiânia-GO
- Brazil
| | - Lucas H. Martorano
- Departamento de Química Orgânica
- Instituto de Química
- Universidade Federal Fluminense
- Niterói-RJ
- Brazil
| | - Gunar V. S. Mota
- Faculdade de Ciências Naturais/Instituto de Ciências Exatas e Naturais
- Universidade Federal do Pará
- Belém-PA
- Brazil
| | - Alessandra L. Valverde
- Departamento de Química Orgânica
- Instituto de Química
- Universidade Federal Fluminense
- Niterói-RJ
- Brazil
| | - José W. M. Carneiro
- Departamento de Química Inorgânica
- Instituto de Química
- Universidade Federal Fluminense
- Niterói-RJ
- Brazil
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5
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Holt TA, Reddy DS, Huple DB, West LM, Rodríguez AD, Crimmins MT, Kutateladze AG. The Discreet Structural Diversity of Briarellins: DU8+ Guided Multiple Structure Revisions Yielded Two Unknown Structural Types. J Org Chem 2020; 85:6201-6205. [PMID: 32323536 DOI: 10.1021/acs.joc.0c00555] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Briarellins, a subset of C2-C11 cyclized cembranoids, were proposed to contain a C3-C14 ether or lactone bridge, similar to asbestinins. However, the total synthesis of the proposed structure of briarellin J revealed a misassignment. We revisited briarellins, computationally, with the help of a recently developed hybrid DFT/parametric method, DU8+, and revised the structures of briarellin C14-C3 ε-lactones to new structural types containing either a C14-C11 or C14-C12 lactone bridge. The original structures of briarellin and asbestinin ethers were confirmed.
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Affiliation(s)
- Tina A Holt
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208, United States
| | - D Sai Reddy
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208, United States
| | - Deepak B Huple
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208, United States
| | - Lyndon M West
- Department of Chemistry and Biochemistry, Florida Atlantic University, Boca Raton, Florida 33431, United States
| | - Abimael D Rodríguez
- Molecular Science Research Center, University of Puerto Rico, 1390 Ponce de León Avenue, San Juan, 00926, Puerto Rico
| | - Michael T Crimmins
- Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina 27599-3290, United States
| | - Andrei G Kutateladze
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208, United States
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6
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Nagatomo M, Fujimoto Y, Masuda K, Inoue M. Construction of a 6/5/9-membered tricyclic structure of cladiellins via radical-polar crossover reaction. J Antibiot (Tokyo) 2019; 72:486-489. [PMID: 30804423 DOI: 10.1038/s41429-019-0150-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Revised: 01/06/2019] [Accepted: 01/15/2019] [Indexed: 11/09/2022]
Abstract
A three-component coupling reaction of structurally simple 6-8 was successfully applied for expeditious synthesis of the 6/5/9-membered tricyclic structure 3 of cladieunicellin D (1) and klysimplexin U (2). Upon treatment with the Et3B/O2 reagent system, α-alkoxyacyl telluride 6, six-membered enone 7, and (Z)-4-hexenal (8) were linked in one pot to provide the densely functionalized 5 via sequential decarbonylative radical generation, radical addition, boron enolate formation, and intermolecular aldol reaction. Subsequent Lewis acid-promoted reductive etherification and SiO2-induced C10-epimerization gave rise to the cis-fused five-membered ether of 4. Finally, cyclization of the nine-membered ring was achieved by the ring-closing metathesis reaction, giving rise to 3. Compound 3 possesses the six stereocenters of 1 and 2, and would thus serve as an advanced intermediate for their total syntheses.
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Affiliation(s)
- Masanori Nagatomo
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Yuki Fujimoto
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Keisuke Masuda
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Masayuki Inoue
- Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan.
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7
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Gil A, Albericio F, Álvarez M. Role of the Nozaki–Hiyama–Takai–Kishi Reaction in the Synthesis of Natural Products. Chem Rev 2017. [DOI: 10.1021/acs.chemrev.7b00144] [Citation(s) in RCA: 99] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Alejandro Gil
- ChemBio Lab, Barcelona Science Park, Baldiri Reixac 10, E-08028 Barcelona, Spain
- CIBER-BBN,
Networking
Centre on Bioengineering, Biomaterials and Nanomedicine, Barcelona Science Park, Baldiri Reixac 10, 08028 Barcelona, Spain
| | - Fernando Albericio
- ChemBio Lab, Barcelona Science Park, Baldiri Reixac 10, E-08028 Barcelona, Spain
- CIBER-BBN,
Networking
Centre on Bioengineering, Biomaterials and Nanomedicine, Barcelona Science Park, Baldiri Reixac 10, 08028 Barcelona, Spain
- University of Kwa-Zulu-Natal, 4001, Durban, South Africa
| | - Mercedes Álvarez
- ChemBio Lab, Barcelona Science Park, Baldiri Reixac 10, E-08028 Barcelona, Spain
- CIBER-BBN,
Networking
Centre on Bioengineering, Biomaterials and Nanomedicine, Barcelona Science Park, Baldiri Reixac 10, 08028 Barcelona, Spain
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8
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Abstract
This review focuses on total syntheses of diterpenoids starting from carvone (1) since 2006 in the alphabetical order of compound names.
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Affiliation(s)
- Hisahiro Hagiwara
- Graduate School of Science and Technology, Niigata University, 8050, 2-Nocho, Ikarashi, Nishi-ku, Niigata, 950-2181, Japan
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9
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Welford AJ, Caldwell JJ, Liu M, Richards M, Brown N, Lomas C, Tizzard GJ, Pitak MB, Coles SJ, Eccles SA, Raynaud FI, Collins I. Synthesis and Evaluation of a 2,11-Cembranoid-Inspired Library. Chemistry 2016; 22:5657-64. [PMID: 26929153 PMCID: PMC4869678 DOI: 10.1002/chem.201505093] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2015] [Indexed: 01/22/2023]
Abstract
The 2,11-cembranoid family of natural products has been used as inspiration for the synthesis of a structurally simplified, functionally diverse library of octahydroisobenzofuran-based compounds designed to augment a typical medicinal chemistry library screen. Ring-closing metathesis, lactonisation and SmI2 -mediated methods were exemplified and applied to the installation of a third ring to mimic the nine-membered ring of the 2,11-cembranoids. The library was assessed for aqueous solubility and permeability, with a chemical-space analysis performed for comparison to the family of cembranoid natural products and a sample set of a screening library. Preliminary investigations in cancer cells showed that the simpler scaffolds could recapitulate the reported anti-migratory activity of the natural products.
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Affiliation(s)
- Amanda J Welford
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - John J Caldwell
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK.
| | - Manjuan Liu
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Meirion Richards
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Nathan Brown
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Cara Lomas
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Graham J Tizzard
- UK National Crystallography Service, University of Southampton, Southampton, SO17 1BJ, UK
| | - Mateusz B Pitak
- UK National Crystallography Service, University of Southampton, Southampton, SO17 1BJ, UK
| | - Simon J Coles
- UK National Crystallography Service, University of Southampton, Southampton, SO17 1BJ, UK
| | - Suzanne A Eccles
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Florence I Raynaud
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Ian Collins
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
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10
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Hooper JF, James NC, Bozkurt E, Aviyente V, White JM, Holland MC, Gilmour R, Holmes AB, Houk KN. Medium-Ring Effects on the Endo/Exo Selectivity of the Organocatalytic Intramolecular Diels–Alder Reaction. J Org Chem 2015; 80:12058-75. [DOI: 10.1021/acs.joc.5b02037] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Joel F. Hooper
- School
of Chemistry, Bio21 Institute, The University of Melbourne, 30 Flemington
Road, Melbourne, Victoria 3010, Australia
| | - Natalie C. James
- Department
of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, United States
| | - Esra Bozkurt
- Laboratory
of Computational Chemistry and Biochemistry, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland
| | - Viktorya Aviyente
- Department
of Chemistry, Boğaziçi University, Bebek 34342, Istanbul, Turkey
| | - Jonathan M. White
- School
of Chemistry, Bio21 Institute, The University of Melbourne, 30 Flemington
Road, Melbourne, Victoria 3010, Australia
| | - Mareike C. Holland
- Department
of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, United States
- Organisch-Chemisches
Institut, Westfälische Wilhelms-Universität Münster, 48149 Münster, Germany
| | - Ryan Gilmour
- Organisch-Chemisches
Institut, Westfälische Wilhelms-Universität Münster, 48149 Münster, Germany
| | - Andrew B. Holmes
- School
of Chemistry, Bio21 Institute, The University of Melbourne, 30 Flemington
Road, Melbourne, Victoria 3010, Australia
| | - K. N. Houk
- Department
of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, United States
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11
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Rallapalli SK, Namjoshi OA, Tiruveedhula VVNPB, Deschamps JR, Cook JM. Stereospecific total synthesis of the indole alkaloid ervincidine. Establishment of the C-6 hydroxyl stereochemistry. J Org Chem 2014; 79:3776-80. [PMID: 24697213 PMCID: PMC4017614 DOI: 10.1021/jo402692u] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
![]()
The
total synthesis of the indole alkaloid ervincidine (3) is reported. This research provides a general entry into C-6 hydroxy-substituted
indole alkaloids with either an α or a β configuration.
This study corrects the errors in Glasby’s book (GlasbyJ. S.; Plenum Press: New York, 1975) and Lounasmaa et al.’s review
(LounasmaaM.; HanhinenP.; WestersundM. In ; CordellG. A., Ed.; Academic Press: San Diego, CA, 1999; Vol. 52, pp 103–195) as well as clarifies the work
of Yunusov et al. (MalikovV. M.; SharipovM. R.; YunusovS. Yu.1972, 8, 760−761. RakhimovD. A.; SharipovM. R.; AripovKh. N.; MalikovV. M.; ShakirovT. T.; YunusovS. Yu.1970, 6, 724–725). It establishes the correct absolute configuration
of the C-6 hydroxyl function in ervincidine. This serves as a structure
proof and corrects the misassigned structure reported in the literature.
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Affiliation(s)
- Sundari K Rallapalli
- Department of Chemistry & Biochemistry, University of Wisconsin-Milwaukee , Milwaukee, Wisconsin 53201, United States
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12
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Kang B, Jakubec P, Dixon DJ. Strategies towards the synthesis of calyciphylline A-type Daphniphyllum alkaloids. Nat Prod Rep 2014; 31:550-62. [PMID: 24595901 DOI: 10.1039/c3np70115h] [Citation(s) in RCA: 94] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The Daphniphyllum alkaloids are a diverse family of natural products rich in number and structural diversity that have been known for many decades. However, the structurally unique subclass of calyciphylline A-type alkaloids has only recently been discovered and is relatively unexplored. Several noteworthy core syntheses and the development of a wide range of novel synthetic strategies have been achieved. This includes strategies based on intramolecular Michael addition, Pd-catalysis, cycloaddition, and Mannich-type reactions. This review will provide an overview of these synthetic studies.
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Affiliation(s)
- Baldip Kang
- The Department of Chemistry, Chemistry Research Laboratory, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK.
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13
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Stereoselective construction of the ABC-ring system of fusidane triterpenes via intermolecular/transannular Michael reaction cascade. Tetrahedron Lett 2014. [DOI: 10.1016/j.tetlet.2014.01.071] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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14
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15
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Yao Y, Liang G. Rapid Construction of the ABC Ring System in the Daphniphyllum Alkaloid Daphniyunnine C. Org Lett 2012; 14:5499-501. [DOI: 10.1021/ol3026395] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Yanmin Yao
- State Key Laboratory and Institute of Elemento-organic Chemistry, Nankai University, Tianjin, China, 300071
| | - Guangxin Liang
- State Key Laboratory and Institute of Elemento-organic Chemistry, Nankai University, Tianjin, China, 300071
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16
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Canham SM, Overman LE, Tanis PS. Identification of an Unexpected 2-Oxonia[3,3]sigmatropic Rearrangement/Aldol Pathway in the Formation of Oxacyclic Rings. Total Synthesis of (+)-Aspergillin PZ. Tetrahedron 2011; 67:9837-9843. [PMID: 22518066 PMCID: PMC3327308 DOI: 10.1016/j.tet.2011.09.079] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
This paper reports the first unambiguous evidence that the cascade synthesis of tetrahydrofuran-containing oxacyclic molecules depicted in Scheme 12 can take place by a 2-oxonia[3,3]sigmatropic/aldol mechanism rather than by a Prins cyclization/pinacol rearrangement sequence. The 8-oxabicyclo[3.2.1]octyl aldehyde products of this reaction, 20 and 29, were employed to complete the first total synthesis of the structurally remarkable isoindolone alkaloid (+)-aspergillin PZ (1). The lack of activity seen in two tumor cell lines for synthetic (+)-aspergillin PZ calls into question the suggestion that aspergillin PZ, like many aspochalasin diterpenes, might exhibit useful antitumor properties.
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Affiliation(s)
- Stephen M Canham
- Department of Chemistry, 1102 Natural Sciences II, University of California, Irvine, CA 92697-2025
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17
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Suyama TL, Gerwick WH, McPhail KL. Survey of marine natural product structure revisions: a synergy of spectroscopy and chemical synthesis. Bioorg Med Chem 2011; 19:6675-701. [PMID: 21715178 PMCID: PMC3205310 DOI: 10.1016/j.bmc.2011.06.011] [Citation(s) in RCA: 135] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2011] [Revised: 05/09/2011] [Accepted: 06/02/2011] [Indexed: 11/16/2022]
Abstract
The structural assignment of new natural product molecules supports research in a multitude of disciplines that may lead to new therapeutic agents and or new understanding of disease biology. However, reports of numerous structural revisions, even of recently elucidated natural products, inspired the present survey of techniques used in structural misassignments and subsequent revisions in the context of constitutional or configurational errors. Given the comparatively recent development of marine natural products chemistry, coincident with modern spectroscopy, it is of interest to consider the relative roles of spectroscopy and chemical synthesis in the structure elucidation and revision of those marine natural products that were initially misassigned. Thus, a tabulated review of all marine natural product structural revisions from 2005 to 2010 is organized according to structural motif revised. Misassignments of constitution are more frequent than perhaps anticipated by reliance on HMBC and other advanced NMR experiments, especially when considering the full complement of all natural products. However, these techniques also feature prominently in structural revisions, specifically of marine natural products. Nevertheless, as is the case for revision of relative and absolute configuration, total synthesis is a proven partner for marine, as well as terrestrial, natural products structure elucidation. It also becomes apparent that considerable 'detective work' remains in structure elucidation, in spite of the spectacular advances in spectroscopic techniques.
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Affiliation(s)
- Takashi L. Suyama
- Department of Pharmaceutical Sciences, 203 Pharmacy Building, Oregon State University, Corvallis OR 97331, U.S.A
| | - William H. Gerwick
- Scripps Institution of Oceanography and Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla CA 92093-0212, U.S.A
| | - Kerry L. McPhail
- Department of Pharmaceutical Sciences, 203 Pharmacy Building, Oregon State University, Corvallis OR 97331, U.S.A
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18
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Welford AJ, Collins I. The 2,11-cyclized cembranoids: cladiellins, asbestinins, and briarellins (period 1998-2010). JOURNAL OF NATURAL PRODUCTS 2011; 74:2318-2328. [PMID: 21970540 DOI: 10.1021/np200125v] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
The 2,11-cyclized cembranoids are isolated from marine invertebrates of Octocorallia species. They are a very interesting class of natural products sharing a common oxatricyclo[6.6.1.0(2,7)]pentadecane core and carrying a varied substituent pattern. This review presents their structural diversity along with the reported biological activities. The 2,11-cyclized cembranoids were comprehensively reviewed previously in 1998, and this contribution will serve as an update of that work. Since 1998 a number of structural assignments of the isolated products have been revised, some as a result of total synthesis efforts. The chemical reactivity of several of the natural compounds has been studied, and the relevance of these findings to the biosynthesis or the generation of isolation artifacts is discussed. The wide range of biological activities displayed by the 2,11-cyclized cembranoids justifies the interest shown within the synthetic chemistry community and suggests that this class of natural products remains a fruitful area for future synthetic and biological research.
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Affiliation(s)
- Amanda J Welford
- Cancer Research UK Cancer Therapeutics Unit, Institute of Cancer Research, 15 Cotswold Road, Sutton, Surrey SM2 5NG, UK
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19
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Clark JS, Berger R, Hayes ST, Thomas LH, Morrison AJ, Gobbi L. Enantioselective total syntheses of three cladiellins (eunicellins): a general approach to the entire family of natural products. Angew Chem Int Ed Engl 2011; 49:9867-70. [PMID: 21082639 DOI: 10.1002/anie.201005508] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- J Stephen Clark
- WestCHEM, School of Chemistry, University of Glasgow, Joseph Black Building, University Avenue, Glasgow G12 8QQ, United Kingdom.
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20
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Herndon JW. The chemistry of the carbon–transition metal double and triple bond: Annual survey covering the year 2009. Coord Chem Rev 2011. [DOI: 10.1016/j.ccr.2010.07.003] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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21
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Clark JS, Berger R, Hayes ST, Thomas LH, Morrison AJ, Gobbi L. Enantioselective Total Syntheses of Three Cladiellins (Eunicellins): A General Approach to the Entire Family of Natural Products. Angew Chem Int Ed Engl 2010. [DOI: 10.1002/ange.201005508] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Abstract
The total synthesis of the originally proposed structure of briarellin J is reported in 15 steps from a known compound and in 23 steps from readily available materials. Key reactions include an exo-selective intramolecular Diels-Alder and a substrate-controlled hydroboration. Discrepancies in the spectroscopic data of the synthetic and natural material led to a revision of the assigned structure.
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Affiliation(s)
- Michael T Crimmins
- Kenan, Caudill, Venable, and Murray Laboratories of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States.
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Wang B, Ramirez AP, Slade JJ, Morken JP. Enantioselective synthesis of (-)-sclerophytin A by a stereoconvergent epoxide hydrolysis. J Am Chem Soc 2010; 132:16380-2. [PMID: 21028899 DOI: 10.1021/ja108185z] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The cytotoxic natural product (-)-sclerophytin A was constructed in 13 steps from geranial. Highlights from the synthesis are a stereoselective Oshima-Utimoto reaction, a Shibata-Baba indium-promoted radical cyclization, and a novel stereoconvergent epoxide hydrolysis.
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Affiliation(s)
- Bin Wang
- Department of Chemistry, Merkert Chemistry Center, Boston College, Chestnut Hill, Massachusetts 02467, United States
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24
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China Raju B, Suman P. New and Facile Approach for the Synthesis of (
E
)‐α,β‐Unsaturated Esters and Ketones. Chemistry 2010; 16:11840-2. [DOI: 10.1002/chem.201000883] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Bhimapaka China Raju
- Organic Chemistry Division‐1, Indian Institute of Chemical Technology, Hyderabad 500 607 (India), Fax: (+91) 40‐27160512
| | - Pathi Suman
- Organic Chemistry Division‐1, Indian Institute of Chemical Technology, Hyderabad 500 607 (India), Fax: (+91) 40‐27160512
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Bateman TD, Joshi AL, Moon K, Galitovskaya EN, Upreti M, Chambers TC, McIntosh MC. Synthesis and anticancer activity of sclerophytin-inspired hydroisobenzofurans. Bioorg Med Chem Lett 2009; 19:6898-901. [PMID: 19896844 DOI: 10.1016/j.bmcl.2009.10.079] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2009] [Revised: 10/15/2009] [Accepted: 10/19/2009] [Indexed: 11/29/2022]
Abstract
Three structurally related sets of hydroisobenzofuran analogs of sclerophytin A were prepared in three or four steps from (S)-(+)-carvone via an aldol-cycloaldol sequence. The most potent members of each set of analogs exhibited IC(50)'s of 1-3 microM in growth inhibitory assays against KB3 cells. The NCI 60-cell line 5-dose assay for analog 6h revealed a GI(50)=0.148 microM and LC(50)=9.36 microM for the RPMI-8226 leukemia cell line, and a GI(50)=0.552 microM and LC(50)=26.8 microM for the HOP-92 non-small cell lung cancer cell line.
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Affiliation(s)
- T David Bateman
- Department of Chemistry and Biochemistry, 119 Chemistry Building, University of Arkansas, Fayetteville, AR 72701, USA
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