1
|
Ashworth E, Coughlan NJA, Hopkins WS, Bieske EJ, Bull JN. Excited-State Barrier Controls E → Z Photoisomerization in p-Hydroxycinnamate Biochromophores. J Phys Chem Lett 2022; 13:9028-9034. [PMID: 36149746 PMCID: PMC9549896 DOI: 10.1021/acs.jpclett.2c02613] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2022] [Accepted: 09/21/2022] [Indexed: 06/16/2023]
Abstract
Molecules based on the deprotonated p-hydroxycinnamate moiety are widespread in nature, including serving as UV filters in the leaves of plants and as the biochromophore in photoactive yellow protein. The photophysical behavior of these chromophores is centered around a rapid E → Z photoisomerization by passage through a conical intersection seam. Here, we use photoisomerization and photodissociation action spectroscopies with deprotonated 4-hydroxybenzal acetone (pCK-) to characterize a wavelength-dependent bifurcation between electron autodetachment (spontaneous ejection of an electron from the S1 state because it is situated in the detachment continuum) and E → Z photoisomerization. While autodetachment occurs across the entire S1(ππ*) band (370-480 nm), E → Z photoisomerization occurs only over a blue portion of the band (370-430 nm). No E → Z photoisomerization is observed when the ketone functional group in pCK- is replaced with an ester or carboxylic acid. The wavelength-dependent bifurcation is consistent with potential energy surface calculations showing that a barrier separates the Franck-Condon region from the E → Z isomerizing conical intersection. The barrier height, which is substantially higher in the gas phase than in solution, depends on the functional group and governs whether E → Z photoisomerization occurs more rapidly than autodetachment.
Collapse
Affiliation(s)
- Eleanor
K. Ashworth
- School
of Chemistry, University of East Anglia, Norwich NR4 7TJ, United Kingdom
| | - Neville J. A. Coughlan
- Department
of Chemistry, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
- WaterMine
Innovation, Inc., Waterloo, Ontario N0B 2T0, Canada
| | - W. Scott Hopkins
- Department
of Chemistry, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
- WaterMine
Innovation, Inc., Waterloo, Ontario N0B 2T0, Canada
| | - Evan J. Bieske
- School
of Chemistry, University of Melbourne, Parkville, VIC 3010, Australia
| | - James N. Bull
- School
of Chemistry, University of East Anglia, Norwich NR4 7TJ, United Kingdom
| |
Collapse
|
2
|
González Moreno A, de Cózar A, Prieto P, Domínguez E, Heredia A. Radiationless mechanism of UV deactivation by cuticle phenolics in plants. Nat Commun 2022; 13:1786. [PMID: 35379806 PMCID: PMC8979964 DOI: 10.1038/s41467-022-29460-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2021] [Accepted: 03/10/2022] [Indexed: 12/31/2022] Open
Abstract
Hydroxycinnamic acids present in plant cuticles, the interphase and the main protective barrier between the plant and the environment, exhibit singular photochemical properties that could allow them to act as a UV shield. Here, we employ transient absorption spectroscopy on isolated cuticles and leaf epidermises to study in situ the photodynamics of these molecules in the excited state. Based on quantum chemical calculations on p-coumaric acid, the main phenolic acid present in the cuticle, we propose a model in which cuticle phenolics display a photoprotective mechanism based in an ultrafast and non-radiative excited state deactivation combined with fluorescence emission. As such, the cuticle can be regarded as the first and foremost protective barrier against UV radiation. This photostable and photodynamic mechanism seems to be universal in land plants giving a special role and function to the presence of different aromatic domains in plant cuticles and epidermises. Phenolics are abundant in plant cuticles. Here, via transient absorption spectroscopy and quantum chemical calculations, the authors propose a model by which cuticle phenolics provide photoprotection due to ultrafast and non-radiative excited state deactivation combined with fluorescence emission.
Collapse
|
3
|
Zhang TS, Fang YG, Song XF, Fang WH, Cui G. Hydrogen-Bonding Interaction Regulates Photoisomerization of a Single-Bond-Rotation Locked Photoactive Yellow Protein Chromophore in Protein. J Phys Chem Lett 2020; 11:2470-2476. [PMID: 32150415 DOI: 10.1021/acs.jpclett.0c00294] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
We have employed the QM(CASPT2//CASSCF)/MM method to explore the excited-state isomerization and decay mechanism of a single-bond-rotation locked photoactive yellow protein (PYP) chromophore in wild-type and mutant proteins. The S1 state is a spectroscopically bright state in the Franck-Condon region. In this state, there exist two excited-state isomerization pathways separately related to the clockwise and anticlockwise rotations of the C=C bond. The clockwise path is favorable because of a small barrier of 2 kcal/mol and uses a novel bicycle-pedal unidirectional photoisomerization mechanism in which the involved two dihedral angles rotate asynchronously because of the reinforced hydrogen-bonding interaction between the chromophore and Cys69. Near the twisted S1 minimum, the chromophore hops to the S0 state via the S1/S0 conical intersection. Finally, the R52A mutation has small effects on the excited-state properties and photoisomerization of the locked PYP chromophore. The present work provides new insights for understanding the photochemistry of PYP chromophores in protein surroundings.
Collapse
Affiliation(s)
- Teng-Shuo Zhang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, Chemistry College, Beijing Normal University, Beijing 100875, P.R. China
| | - Ye-Guang Fang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, Chemistry College, Beijing Normal University, Beijing 100875, P.R. China
| | - Xiu-Fang Song
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, Chemistry College, Beijing Normal University, Beijing 100875, P.R. China
| | - Wei-Hai Fang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, Chemistry College, Beijing Normal University, Beijing 100875, P.R. China
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, Chemistry College, Beijing Normal University, Beijing 100875, P.R. China
| |
Collapse
|
4
|
Bull JN, Anstöter CS, Verlet JRR. Fingerprinting the Excited-State Dynamics in Methyl Ester and Methyl Ether Anions of Deprotonated para-Coumaric Acid. J Phys Chem A 2020; 124:2140-2151. [PMID: 32105474 DOI: 10.1021/acs.jpca.9b11993] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Chromophores based on the para-hydroxycinnamate moiety are widespread in the natural world, including as the photoswitching unit in photoactive yellow protein and as a sunscreen in the leaves of plants. Here, photodetachment action spectroscopy combined with frequency- and angle-resolved photoelectron imaging is used to fingerprint the excited-state dynamics over the first three bright action-absorption bands in the methyl ester anions (pCEs-) of deprotonated para-coumaric acid at a temperature of ∼300 K. The excited states associated with the action-absorption bands are classified as resonances because they are situated in the detachment continuum and are open to autodetachment. The frequency-resolved photoelectron spectrum for pCEs- indicates that all photon energies over the S1(ππ*) band lead to similar vibrational autodetachment dynamics. The S2(nπ*) band is Herzberg-Teller active and has comparable brightness to the higher lying 21(ππ*) band. The frequency-resolved photoelectron spectrum over the S2(nπ*) band indicates more efficient internal conversion to the S1(ππ*) state for photon energies resonant with the Franck-Condon modes (∼80%) compared with the Herzberg-Teller modes (∼60%). The third action-absorption band, which corresponds to excitation of the 21(ππ*) state, shows complex and photon energy-dependent dynamics, with 20-40% of photoexcited population internally converting to the S1(ππ*) state. There is also evidence for a mode-specific competition between prompt autodetachment and internal conversion on the red edge of the 21(ππ*) band. There is no evidence for recovery of the ground electronic state and statistical electron ejection (thermionic emission) following photoexcitation over any of the three action-absorption bands. The photoelectron spectra for the deprotonated methyl ether derivative (pCEt-) at photon energies over the S1(ππ*) and S2(nπ*) bands indicate diametrically opposed dynamics compared with pCEs-, namely, intense thermionic emission due to efficient recovery of the ground electronic state.
Collapse
Affiliation(s)
- James N Bull
- School of Chemistry, Norwich Research Park, University of East Anglia, Norwich NR4 7TJ, U.K
| | - Cate S Anstöter
- Department of Chemistry, Durham University, Durham DH1 3LE, U.K
| | - Jan R R Verlet
- Department of Chemistry, Durham University, Durham DH1 3LE, U.K
| |
Collapse
|
5
|
Bull JN, Anstöter CS, Verlet JRR. Ultrafast valence to non-valence excited state dynamics in a common anionic chromophore. Nat Commun 2019; 10:5820. [PMID: 31862884 PMCID: PMC6925192 DOI: 10.1038/s41467-019-13819-6] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2019] [Accepted: 11/27/2019] [Indexed: 12/19/2022] Open
Abstract
Non-valence states in neutral molecules (Rydberg states) have well-established roles and importance in photochemistry, however, considerably less is known about the role of non-valence states in photo-induced processes in anions. Here, femtosecond time-resolved photoelectron imaging is used to show that photoexcitation of the S1(ππ*) state of the methyl ester of deprotonated para-coumaric acid – a model chromophore for photoactive yellow protein (PYP) – leads to a bifurcation of the excited state wavepacket. One part remains on the S1(ππ*) state forming a twisted intermediate, whilst a second part leads to the formation of a non-valence (dipole-bound) state. Both populations eventually decay independently by vibrational autodetachment. Valence-to-non-valence internal conversion has hitherto not been observed in the intramolecular photophysics of an isolated anion, raising questions into how common such processes might be, given that many anionic chromophores have bright valence states near the detachment threshold. Photoactive biomolecules rely on chromophores whose photochemistry depends on the environment. Here, the excited state dynamics of a model for the anionic biochromophore in photoactive yellow protein is investigated by time-resolved photoelectron spectroscopy showing involvement of a non-valence state, and lack of E-Z isomerisation in the gas phase.
Collapse
Affiliation(s)
- James N Bull
- School of Chemistry, Norwich Research Park, University of East Anglia, Norwich, NR4 7TJ, UK
| | - Cate S Anstöter
- Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK
| | - Jan R R Verlet
- Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK.
| |
Collapse
|
6
|
Bull JN, Silva GD, Scholz MS, Carrascosa E, Bieske EJ. Photoinitiated Intramolecular Proton Transfer in Deprotonated para-Coumaric Acid. J Phys Chem A 2019; 123:4419-4430. [DOI: 10.1021/acs.jpca.9b02023] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- James N. Bull
- School of Chemistry, University of Melbourne, Parkville, VIC 3010, Australia
- School of Chemistry, Norwich Research Park, University of East Anglia, Norwich NR4 7TJ, United Kingdom
| | - Gabriel da Silva
- Department of Chemical Engineering, University of Melbourne, Parkville, VIC 3010, Australia
| | - Michael S. Scholz
- School of Chemistry, University of Melbourne, Parkville, VIC 3010, Australia
| | - Eduardo Carrascosa
- School of Chemistry, University of Melbourne, Parkville, VIC 3010, Australia
| | - Evan J. Bieske
- School of Chemistry, University of Melbourne, Parkville, VIC 3010, Australia
| |
Collapse
|
7
|
Affiliation(s)
- Alice Henley
- Department of Chemistry, University College London, London, UK
| | | |
Collapse
|
8
|
Ai Y, Xing J, Zhang A, Zhao C, Liu Y, Xie B, Chen W, Cui G, Lu Z, Wang X. Computational Study on the Excited-State Decay of 5-Methylcytosine and 5-Hydroxymethylcytosine: The Common Form of DNA Methylation and Its Oxidation Product. J Phys Chem B 2018; 122:10424-10434. [DOI: 10.1021/acs.jpcb.8b07830] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
| | | | | | | | | | - Binbin Xie
- Hangzhou Institute of Advanced Studies, Zhejiang Normal University, 1108 Gengwen Road, Hangzhou 311231, Zhejiang, P. R. China
| | | | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, P. R. China
| | | | - Xiangke Wang
- NAAM Research Group, Faculty of Science, King Abdulaziz University, Jeddah 21589, Saudi Arabia
- Collaborative Innovation Centre of Radiation Medicine of Jiangsu Higher Education Institutions, School for Radiological and Interdisciplinary Sciences, Soochow University, Suzhou 215123, P. R. China
| |
Collapse
|
9
|
Hirano K, Nakano H, Nakao Y, Sato H, Sakaki S. Photo absorption of
p-coumaric acid in aqueous solution: RISM-SCF-SEDD theory approach. J Comput Chem 2017; 38:1567-1573. [DOI: 10.1002/jcc.24784] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2016] [Revised: 02/01/2017] [Accepted: 02/22/2017] [Indexed: 12/19/2022]
Affiliation(s)
- Kenji Hirano
- Department of Molecular Engineering; Kyoto University; Kyoto 615-8510 Japan
| | - Hiroshi Nakano
- Department of Molecular Engineering; Kyoto University; Kyoto 615-8510 Japan
| | - Yoshihide Nakao
- Department of Molecular Engineering; Kyoto University; Kyoto 615-8510 Japan
| | - Hirofumi Sato
- Department of Molecular Engineering; Kyoto University; Kyoto 615-8510 Japan
| | - Shigeyoshi Sakaki
- Department of Molecular Engineering; Kyoto University; Kyoto 615-8510 Japan
| |
Collapse
|
10
|
Ahamed G, Batuta S, Ghosh D, Begum NA, Mandal D. Photophysical studies on a photoactive yellow protein fluorophore analog with the 4-Hydroxy group replaced by 4-Dimethylamino group. J Photochem Photobiol A Chem 2017. [DOI: 10.1016/j.jphotochem.2016.11.017] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
11
|
Yang D, Zheng R, Lv J. Hydrogen bonding and excited state properties of the photoexcited hydrogen-bonded (E
)-S
-(2-aminopropyl) 3-(4-hydroxyphenyl)prop-2-enethioate complexes. J PHYS ORG CHEM 2016. [DOI: 10.1002/poc.3634] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
- Dapeng Yang
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou 450045 China
| | - Rui Zheng
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou 450045 China
| | - Jian Lv
- College of Mathematics and Information Science; North China University of Water Resources and Electric Power; Zhengzhou 450045 China
| |
Collapse
|
12
|
Chang XP, Xie XY, Lin SY, Cui G. QM/MM Study on Mechanistic Photophysics of Alloxazine Chromophore in Aqueous Solution. J Phys Chem A 2016; 120:6129-36. [DOI: 10.1021/acs.jpca.6b02669] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Xue-Ping Chang
- Key Laboratory
of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
| | - Xiao-Ying Xie
- Key Laboratory
of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
| | - Shi-Yun Lin
- Key Laboratory
of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
| | - Ganglong Cui
- Key Laboratory
of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
| |
Collapse
|
13
|
Mendive-Tapia D, Kortekaas L, Steen JD, Perrier A, Lasorne B, Browne WR, Jacquemin D. Accidental degeneracy in the spiropyran radical cation: charge transfer between two orthogonal rings inducing ultra-efficient reactivity. Phys Chem Chem Phys 2016; 18:31244-31253. [DOI: 10.1039/c6cp06907j] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We unravel an original photoswitching mechanism in spiropyran radical cation.
Collapse
Affiliation(s)
- David Mendive-Tapia
- Institut Charles Gerhardt Montpellier
- UMR 5253
- CNRS-UM-ENSCM
- CTMM
- Université Montpellier
| | - Luuk Kortekaas
- Molecular Inorganic Chemistry
- Stratingh Institute for Chemistry
- Faculty of Mathematics and Natural Sciences
- University of Groningen
- 9747AG Groningen
| | - Jorn D. Steen
- Molecular Inorganic Chemistry
- Stratingh Institute for Chemistry
- Faculty of Mathematics and Natural Sciences
- University of Groningen
- 9747AG Groningen
| | - Aurélie Perrier
- Université Paris Diderot Sorbonne Paris Cité
- F-75205 Paris Cedex 13
- France
- Institut de Recherche de Chimie Paris
- PSL Research University
| | - Benjamin Lasorne
- Institut Charles Gerhardt Montpellier
- UMR 5253
- CNRS-UM-ENSCM
- CTMM
- Université Montpellier
| | - Wesley R. Browne
- Molecular Inorganic Chemistry
- Stratingh Institute for Chemistry
- Faculty of Mathematics and Natural Sciences
- University of Groningen
- 9747AG Groningen
| | - Denis Jacquemin
- Chimie Et Interdisciplinarité
- Synthèse, Analyse, Modélisation (CEISAM)
- UMR CNRS no. 6230
- 44322 Nantes Cedex 3
- France
| |
Collapse
|
14
|
Chang XP, Li CX, Xie BB, Cui G. Photoprotection Mechanism of p-Methoxy Methylcinnamate: A CASPT2 Study. J Phys Chem A 2015; 119:11488-97. [PMID: 26513466 DOI: 10.1021/acs.jpca.5b08434] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
p-Methoxy methylcinnamate (p-MMC) shares the same molecular skeleton with octyl methoxycinnamate sunscreen. It is recently found that adding one water to p-MMC can significantly enhance the photoprotection efficiency. However, the physical origin is elusive. Herein we have employed multireference complete active space self-consistent field (CASSCF) and multistate complete active-space second-order perturbation (MS-CASPT2) methods to scrutinize the photophysical and photochemical mechanism of p-MMC and its one-water complex p-MMC-W. Specifically, we optimize the stationary-point structures on the (1)ππ*, (1)nπ*, and S0 potential energy surfaces to locate the (1)ππ*/S0 and (1)ππ*/(1)nπ* conical intersections and to map (1)ππ* and (1)nπ* excited-state relaxation paths. On the basis of the results, we find that, for the trans p-MMC, the major (1)ππ* deactivation path is decaying to the dark (1)nπ* state via the in-plane (1)ππ*/(1)nπ* crossing point, which only need overcome a small barrier of 2.5 kcal/mol; the minor one is decaying to the S0 state via the (1)ππ*/S0 conical intersection induced by out-of-plane photoisomerization. For the cis p-MMC, these two decay paths are comparable (1)ππ* deactivation paths: one is decaying to the dark (1)nπ* state via the (1)ππ*/(1)nπ* crossing point, and the second is decaying to the ground state via the (1)ππ*/S0 conical intersection. One-water hydration stabilizes the (1)ππ* state and meanwhile destabilizes the (1)nπ* state. As a consequence, the (1)ππ* deactivation path to the dark (1)nπ* state is heavily inhibited. The related barriers are increased to 5.8 and 3.3 kcal/mol for the trans and cis p-MMC-W, respectively. In comparison, the barriers associated with the photoisomerization-induced (1)ππ* decay paths are reduced to 2.5 and 1.3 kcal/mol for the trans and cis p-MMC-W. Therefore, the (1)ππ* decay paths to the S0 state are dominant relaxation channels when adding one water molecule. Finally, the present work contributes a lot of knowledge to understanding the photoprotection mechanism of methylcinnamate derivatives.
Collapse
Affiliation(s)
- Xue-Ping Chang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China
| | - Chun-Xiang Li
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China
| | - Bin-Bin Xie
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China
| |
Collapse
|
15
|
Gromov EV. Unveiling the mechanism of photoinduced isomerization of the photoactive yellow protein (PYP) chromophore. J Chem Phys 2014; 141:224308. [DOI: 10.1063/1.4903174] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Affiliation(s)
- Evgeniy V. Gromov
- Theoretische Chemie, Physikalisch-Chemisches Institut, Universität Heidelberg, Heidelberg, Germany
| |
Collapse
|
16
|
|
17
|
Knoch F, Morozov D, Boggio-Pasqua M, Groenhof G. Steering the excited state dynamics of a photoactive yellow protein chromophore analogue with external electric fields. COMPUT THEOR CHEM 2014. [DOI: 10.1016/j.comptc.2014.04.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
|
18
|
Mendonça L, Hache F, Changenet-Barret P, Plaza P, Chosrowjan H, Taniguchi S, Imamoto Y. Ultrafast Carbonyl Motion of the Photoactive Yellow Protein Chromophore Probed by Femtosecond Circular Dichroism. J Am Chem Soc 2013; 135:14637-43. [DOI: 10.1021/ja404503q] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Lucille Mendonça
- Laboratoire d’Optique et Biosciences, Ecole Polytechnique/CNRS/INSERM, 91128 Palaiseau cedex, France
| | - François Hache
- Laboratoire d’Optique et Biosciences, Ecole Polytechnique/CNRS/INSERM, 91128 Palaiseau cedex, France
| | | | - Pascal Plaza
- Ecole Normale Supérieure,
Département de Chimie, UMR 8640 CNRS-ENS-UPMC, 24 rue Lhomond,
75005 Paris, France
| | - Haik Chosrowjan
- Institute for Laser Technology, 2-6 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Seiji Taniguchi
- Institute for Laser Technology, 2-6 Yamadaoka, Suita, Osaka 565-0871, Japan
| | - Yasushi Imamoto
- Department
of Biophysics, Graduate School of Sciences, Kyoto University, Kyoto 6068502, Japan
| |
Collapse
|
19
|
García-Prieto FF, Galván IF, Muñoz-Losa A, Aguilar MA, Martín ME. Solvent Effects on the Absorption Spectra of the para-Coumaric Acid Chromophore in Its Different Protonation Forms. J Chem Theory Comput 2013; 9:4481-94. [DOI: 10.1021/ct400145z] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Francisco F. García-Prieto
- Química
Física. Edif. José María Viguera Lobo, Universidad de Extremadura, Avda. de
Elvas s/n, 06071 Badajoz, Spain
| | - Ignacio Fdez. Galván
- Química
Física. Edif. José María Viguera Lobo, Universidad de Extremadura, Avda. de
Elvas s/n, 06071 Badajoz, Spain
- Department
of Chemistry, Ångström, The Theoretical Chemistry
Programme, Uppsala University, P.O. Box 518, SE-751 20 Uppsala, Sweden
| | - Aurora Muñoz-Losa
- Química
Física. Edif. José María Viguera Lobo, Universidad de Extremadura, Avda. de
Elvas s/n, 06071 Badajoz, Spain
| | - Manuel A. Aguilar
- Química
Física. Edif. José María Viguera Lobo, Universidad de Extremadura, Avda. de
Elvas s/n, 06071 Badajoz, Spain
| | - M. Elena Martín
- Química
Física. Edif. José María Viguera Lobo, Universidad de Extremadura, Avda. de
Elvas s/n, 06071 Badajoz, Spain
| |
Collapse
|
20
|
Liu YJ, Roca-Sanjuán D, Lindh R. Computational Photochemistry and Photophysics: the state of the art. PHOTOCHEMISTRY 2012. [DOI: 10.1039/9781849734882-00042] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
This review starts with the most basic concepts in photochemistry and photophysics, followed by a chronological introduction of theoretical methods and relevant applications in the history of computational photochemistry, along with the authors’ comments on the methodologies currently available for photochemical studies. Recent advances in the field are next summarized and discussed, focusing separately on methodology and computational techniques and some highlighted applied works carried out during the last two years on the topics of photodissociations, photostability, photodimerizations, photoisomerizations, proton/hydrogen transfer, photodecarboxylations, charge transport, bioexcimers, chemiluminescence and bioluminescence. We finish this review by conclusions and an outlook of the future.
Collapse
Affiliation(s)
- Ya-Jun Liu
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry Beijing Normal University Beijing China
| | - Daniel Roca-Sanjuán
- Department of Chemistry - Ångström, Theoretical Chemistry Programme Uppsala University Uppsala Sweden
| | - Roland Lindh
- Department of Chemistry - Ångström, Theoretical Chemistry Programme Uppsala University Uppsala Sweden
| |
Collapse
|
21
|
Changenet-Barret P, Lacombat F, Plaza P. Reaction-coordinate tracking in the excited-state deactivation of the photoactive yellow protein chromophore in solution. J Photochem Photobiol A Chem 2012. [DOI: 10.1016/j.jphotochem.2012.03.011] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
|