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Gutierrez MG, Theis Z, Lewis TWR, Bellert DJ. A molecular beam apparatus for performing single photon initiated dissociative rearrangement reactions (SPIDRR) with transition metal cation bound organic clusters. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2018; 89:074101. [PMID: 30068115 DOI: 10.1063/1.5024939] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
The study of gas-phase ion-molecule reactions has been influential in the investigation of transition metal mediated bond activation and catalysis. We have furthered this field by developing a new technique capable of measuring the microcanonical kinetics for reactions between transition metal cations and neutral organic molecules. This novel method has been designated as single photon initiated dissociative rearrangement reaction (SPIDRR) technique and provides a nearly direct measurement of microcanonical reaction rate constants. For this reason, SPIDRR offers unique insight into reaction mechanisms and dynamics by assessing the energy dependence of the microcanonical rate constant, as well as measuring product branching fractions and kinetic isotope effects. The following paper provides a detailed overview of SPIDRR and its advantages in the field of gas-phase catalysis research.
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Affiliation(s)
- M G Gutierrez
- Department of Chemistry and Biochemistry, Baylor University, Waco, Texas 76798-7348, USA
| | - Z Theis
- Department of Chemistry and Biochemistry, Baylor University, Waco, Texas 76798-7348, USA
| | - T W R Lewis
- Department of Chemistry and Biochemistry, Baylor University, Waco, Texas 76798-7348, USA
| | - D J Bellert
- Department of Chemistry and Biochemistry, Baylor University, Waco, Texas 76798-7348, USA
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2
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Zhao PP, Wang YC, Jia YM, Sheng Y. Theoretical investigation on the gas phase decomposition of ethyl acetate by Ni+. Struct Chem 2018. [DOI: 10.1007/s11224-018-1125-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Zhao PP, Wang YC, Sheng Y, Jia YM. Theoretical study of Ni + assisted C-C and C-H bond activations of propionaldehyde in the gas phase. COMPUT THEOR CHEM 2017; 1114:140-145. [PMID: 28819583 PMCID: PMC5521852 DOI: 10.1016/j.comptc.2017.05.030] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
The DFT investigation of Ni+ assisted decomposition of propionaldehyde has been applied. Interestingly, two competitive reaction paths have been found. The C—C activation path is kinetically more favorable than the C—H activation path. The bonding analysis indicated that the initial complex, Ni+(C3H6O), is formed by electrostatic interaction.
The reactions of Ni+ with propionaldehyde in the gas phase have been systematically investigated using density functional theory at the B3LYP/def2-TZVP level. The decomposition reaction mechanism has been identified. Our calculations indicated that Ni+ can assist decomposition of propionaldehyde to form Ni+CO and C2H6 through two types of reaction channel: C—C bond activation and C—H bond activation. In addition, charge decomposition analysis (CDA) was carried out to obtain a deeper understanding for orbital interaction of the initial complex. The bonding properties of the species involved were discussed by means of diverse analysis methods including electron localization function (ELF) and atoms in molecules (AIM).
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Affiliation(s)
- Pei-Pei Zhao
- College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou, Gansu 730070, PR China
| | - Yong-Cheng Wang
- College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou, Gansu 730070, PR China
| | - Yang Sheng
- College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou, Gansu 730070, PR China
| | - Yi-Ming Jia
- College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou, Gansu 730070, PR China
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Pinto VS, Marques SCR, Rodrigues P, Barros MT, Costa ML, Langley GJ, Fernandez MT, Cabral BJC, Duarte MF, Couto N. An electrospray ionization mass spectrometry study of azidoacetic acid/transition metal complexes. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2017; 31:1001-1013. [PMID: 28402603 DOI: 10.1002/rcm.7877] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2017] [Revised: 03/18/2017] [Accepted: 04/07/2017] [Indexed: 06/07/2023]
Abstract
RATIONALE The complexation behavior of transition metals with organic azides by electrospray ionization (ESI) tandem mass spectrometry (MS/MS) is not completely understood. In this study, fragmentation patterns of complex ions having azidoacetic acid coordinated to Ni/Co/Fe were elucidated. The role of transition metals in the mediation of ligand rearrangements in gas phase is experimentally supported. METHODS The complexation of some transition metals, nickel, cobalt and iron, by azidoacetic acid was studied by means of ESI and MS/MS. Fragmentation patterns were discerned via consecutive MS/MS experiments on an ion trap mass spectrometer and confirmed by high-resolution (HR) Fourier transform ion cyclotron resonance MS. Density functional theory (DFT) calculations were used to characterize the major ions observed in MS. RESULTS Only singly positively charged complex ions were detected presenting various stoichiometries. MS/MS and theoretical calculations allowed us to confirm assignments and coordination sites. Structural evidence suggested that the azidoacetic acid can behave as monodentate and/or bidentate and coordination through the oxygen and nitrogen atoms are both possible. Experimental evidence strongly points to a role of Ni/Co/Fe, in oxidative state (I), in mediating C-C bond activation in the gas phase. CONCLUSIONS MS/MS and HRMS experiments were able to elucidate azidoacetic acid complexation with Ni/Co/Fe and several gas-phase processes involving metal reduction and rearrangements. The definition of the coordination pattern dictated by the competition between the nitrogen and the oxygen atoms is also dependent on the metal centre in a very dynamic process. Copyright © 2017 John Wiley & Sons, Ltd.
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Affiliation(s)
- Vítor S Pinto
- Departamento de Química e Bioquímica da Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
| | - Susana C R Marques
- Departamento de Química e Bioquímica da Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
| | - Paula Rodrigues
- CQFB, Departamento de Química da Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, Quinta da Torre, 2825-114, Monte da Caparica, Portugal
| | - M Teresa Barros
- CQFB, Departamento de Química da Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, Quinta da Torre, 2825-114, Monte da Caparica, Portugal
| | - M Lourdes Costa
- Laboratório de Instrumentação Engenharia Biomedica e Fsica da Radiação (LIBPhys-UNL), Departamento de Física, Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, Monte da Caparica, 2892-516, Caparica, Portugal
| | - G John Langley
- Chemistry Department, University of Southampton, Highfield, Southampton, SO17 1BJ, UK
| | - M Tereza Fernandez
- CQB, Centro de Química e Bioquímica, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
| | - Benedito J C Cabral
- Departamento de Química e Bioquímica da Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
- Grupo de Física Matemática da Universidade de Lisboa, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
| | - M Filomena Duarte
- CQB, Centro de Química e Bioquímica, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
| | - Narciso Couto
- ChELSI Institute, Department of Chemical and Biological Engineering, University of Sheffield, Mappin Street, Sheffield, S1 3JD, UK
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Mansell A, Theis Z, Gutierrez MG, Faza ON, Lopez CS, Bellert DJ. Submerged Barriers in the Ni(+) Assisted Decomposition of Propionaldehyde. J Phys Chem A 2016; 120:2275-84. [PMID: 27054589 DOI: 10.1021/acs.jpca.5b08444] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The reaction dynamics of the Ni(+) mediated decarbonylation of propionaldehyde was assessed using the single photon initiated decomposition rearrangement reaction (SPIDRR) technique. The exothermic production of Ni(+)CO was temporally monitored and the associated rate constants, k(E), were extracted as a function of activating photon energy. In addition, the reaction potential energy surface was calculated at the UCCSD(T)/def2-TZVP//PBEPBE/cc-pVDZ level of theory to provide an atomistic description of the reaction profile. The decarbonylation of propionaldehyde can be understood as proceeding through parallel competitive reaction pathways that are initiated by Ni(+) insertion into either the C-C or C-H bond of the propionaldehyde carbonyl carbon. Both paths lead to the elimination of neutral ethane and are governed by submerged barriers. The lower energy sequence is a consecutive C-C/C-H addition process with a submerged barrier of 14 350 ± 600 cm(-1). The higher energy sequence is a consecutive C-H/C-C addition process with a submerged barrier of 15 400 ± 600 cm(-1). Both barriers were determined using RRKM calculations fit to the experimentally determined k(E) values. The measured energy difference between the two barriers agrees with the DFT computed difference in rate limiting transition-state energies, 18 413 and 19 495 cm(-1).
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Affiliation(s)
- A Mansell
- Department of Chemistry and Biochemistry, Baylor University , Waco, Texas 76798, United States
| | - Z Theis
- Department of Chemistry and Biochemistry, Baylor University , Waco, Texas 76798, United States
| | - M G Gutierrez
- Department of Chemistry and Biochemistry, Baylor University , Waco, Texas 76798, United States
| | - O Nieto Faza
- Departamento de Quimica Organica, Universidad de Vigo , 36310, Vigo, Spain
| | - C Silva Lopez
- Departamento de Quimica Organica, Universidad de Vigo , 36310, Vigo, Spain
| | - D J Bellert
- Department of Chemistry and Biochemistry, Baylor University , Waco, Texas 76798, United States
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Villarroel OJ, Laboren IE, Bellert DJ. Co(+)-assisted decomposition of h6-acetone and d6-acetone: acquisition of reaction rate constants and dynamics of the dissociative mechanism. J Phys Chem A 2012; 116:3081-8. [PMID: 22352987 DOI: 10.1021/jp2047135] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Reaction rate constants have been acquired for the gaseous unimolecular decomposition reaction of the Co(+)(OC(CH(3))(2)) cluster ion and its deuterium labeled analog. Each rate constant is measured at a well resolved cluster internal energy within the range 12,300-16,100 cm(-1). The weighted, averaged kinetic isotope effect (KIE), k(H)/k(D) = 1.54 ± 0.05, is about three times smaller than the KIE measured for the rate-determining rate constants in the similar Ni(+)(OC(CH(3))(2)) decomposition reaction. These reactions likely follow the same oxidative addition-reductive elimination mechanism. Thus, this unexpected change in the KIE magnitudes is not due to differences in the dissociative reaction coordinates. Rather, we propose that the unique dissociation dynamics of these two similar systems is due to differences in the low-lying electronic structure of each transition metal ion.
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Affiliation(s)
- Otsmar J Villarroel
- Department of Chemistry and Biochemistry, Baylor University, One Bear Place No. 97348, Waco, Texas 76798-7348, USA
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The DFT study on CC activation of butanone by Ni+ in gas phase: Two parallel decomposition reaction mechanisms. COMPUT THEOR CHEM 2012. [DOI: 10.1016/j.comptc.2011.10.024] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Schlangen M, Schwarz H. Probing elementary steps of nickel-mediated bond activation in gas-phase reactions: Ligand- and cluster-size effects. J Catal 2011. [DOI: 10.1016/j.jcat.2011.03.020] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Assis AC, Couto N, Duarte MF, Rodrigues P, Barros MT, Costa ML, Cabral BJC, Fernandez MT. Azidoacetone as a complexing agent of transition metals Ni2+/Co2+ promoted dissociation of the C-C bond in azidoacetone. JOURNAL OF MASS SPECTROMETRY : JMS 2011; 46:696-704. [PMID: 21706676 DOI: 10.1002/jms.1940] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
The relevance of metal interactions with azides has led us to the study of the complexation of some transition metals, nickel and cobalt, by azidoacetone by means of electrospray ionization mass spectrometry (ESI-MS). Complexes were obtained from solutions of NiCl(2) and CoCl(2) , in methanol/water. Nickel was electrosprayed with other counter ion, bromide (Br), as well as other solvent (ethanol/water). For nickel and cobalt, the complexes detected were single positively charged, with various stoichiometries, some resulted from the fragmentation of the ligand, the loss of N(2) being quite common. The most abundant species were [Ni(II)Az(2)X](+) where X = Cl, Br and Az = azidoacetone. Some of the complexes showed solvation with the solvent components. Metal reduction was observed in complexes where a radical was lost, resulting from the homolytic cleavage of a metal coordination bond. Collision-induced dissociation (CID) experiments followed by tandem mass spectrometry (MS-MS) analysis were not absolutely conclusive about the coordination site. However, terminal ions of the fragmentation routes were explained by a gas-phase mechanism proposed where a C-C bond was activated and the metal inserted subsequently. Density functional theory calculations provided structures for some complexes. In [Ni(II)Az(2)X](+) species, one azidoacetone ligand is monodentate and the dominant binding location is the alkylated nitrogen and not the carbonyl group. The other azidoacetone ligand is bidentate showing coordination through alkylated nitrogen and the carbonyl group. These are also the preferential binding sites for the most stable isomer of [Ni(II)AzX](+) species.
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Affiliation(s)
- Ana C Assis
- CQB, Centro de Química e Bioquímica, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal
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Laboren IE, Villarroel OJ, Dee SJ, Castleberry VA, Klausmeyer K, Bellert DJ. Reaction rate constants and mechanistic detail of the Ni+ + butanone reaction. J Phys Chem A 2011; 115:1810-20. [PMID: 21338169 DOI: 10.1021/jp111487r] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The unimolecular decomposition kinetics of the jet-cooled Ni(+)-butanone cluster ion has been monitored over a range of internal energies (16000-18800 cm⁻¹). First-order rate constants are acquired for the precursor ion dissociation into three product channels. The temporal growth of each fragment ion is selectively monitored in a custom instrument and yields similar valued rate constants at a common ion internal energy. The decomposition reaction is proposed to proceed along two parallel reaction coordinates. Each dissociative pathway is rate-limited by the initial Ni(+) oxidative addition into either the C-CH₃ or C-C₂H₅ σ-bond in the butanone molecule. Ratios of integrated product ion intensities as well as the measured rate constants are used to determine values for each σ-bond activation rate constant. The lowest energy measurement presented in this study occurs when the binary complex ion possesses an internal energy of 16000 cm⁻¹. Under this condition, the Ni(+) assisted decomposition of the butanone molecule is rate limited by k(act)(C-C₂H₅) = (0.92 ± 0.08) × 10⁵ s⁻¹ and k(act)(C-CH₃) = (0.37 ± 0.03) × 10⁵ s⁻¹. The relative magnitudes of the two rate constants reflect the greater probability for reaction to occur along the C-C₂H₅ σ-bond insertion pathway, consistent with thermodynamic arguments. DFT calculations at the B3LYP/6-311++G(d,p) level of theory suggest the most likely geometries and relative energies of the reactants, intermediates, and products.
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Affiliation(s)
- Ivanna E Laboren
- Department of Chemistry and Biochemistry, Baylor University, One Bear Place #97348, Waco, Texas 76798-7348, USA
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Dee SJ, Castleberry VA, Villarroel OJ, Laboren IE, Bellert DJ. Low-energy reaction rate constants for the Ni+-assisted decomposition of acetaldehyde: observation of C-H and C-C activation. J Phys Chem A 2010; 114:1783-9. [PMID: 20050634 DOI: 10.1021/jp910396t] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Rate constants for the low-energy Ni(+)-assisted dissociative reaction of acetaldehyde have been measured under jet-cooled conditions in the gas phase. The rate constants are acquired through monitoring the time dependence of fragment Ni(+)CO formation. The decomposition of the precursor Ni(+)-acetaldehyde cluster ion proceeds via consecutive, parallel reaction coordinates that originate with the Ni(+)-assisted cleavage of either a C-C or an aldehyde C-H bond. The energies used to initiate these reactions are well below that required to cleave sigma-bonds in the isolated acetaldehyde molecule. Direct measurement of the reaction kinetics over a range of energies indicates that the rate-limiting step in the dissociative mechanism changes at cluster ion internal energies = 17,200 +/- 400 cm(-1). Arguments are presented that this energy marks the closure of the dissociative coordinate that initiates with C-H sigma-bond activation and thus provides a measure of the activation energy of this dissociative pathway.
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Affiliation(s)
- S Jason Dee
- Department of Chemistry and Biochemistry, Baylor University, One Bear Place 97348, Waco, Texas 76798-7348, USA
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Dee SJ, Castleberry VA, Villarroel OJ, Laboren IE, Frey SE, Ashley D, Bellert DJ. Rate-limiting step in the low-energy unimolecular decomposition reaction of Ni+* acetone into Ni+CO + ethane. J Phys Chem A 2009; 113:14074-80. [PMID: 19877648 DOI: 10.1021/jp906912d] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Rate constants for the low-energy Ni(+)-assisted C-C bond cleavage reaction of deuterium-labeled acetone have been acquired under jet-cooled conditions in the gas phase. The energies used to initiate the dissociative reactions of the precursor complex ion Ni(+)(d(6)-Ac) are well below that required to cleave C-C sigma-bonds in isolated organic molecules. The rate constants are compared to those acquired previously for the lighter Ni(+)(h(6)-Ac) isotope and result in a substantial kinetic isotope effect (k(H)/k(D) approximately 5.5). Arguments are made that implicate isomerization leading to C-C bond coupling as the rate-limiting step (not C-C sigma-bond activation) in the dissociative reaction.
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Affiliation(s)
- S Jason Dee
- Department of Chemistry and Biochemistry, Baylor University, One Bear Place #97348, Waco, Texas 76798-7348, USA
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