1
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Xu Z, DiBello M, Wang Z, Rose JA, Chen L, Li X, Herzon SB. Stereocontrolled Synthesis of the Fully Glycosylated Monomeric Unit of Lomaiviticin A. J Am Chem Soc 2022; 144:16199-16205. [PMID: 35998350 DOI: 10.1021/jacs.2c07631] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We describe a stereocontrolled synthesis of 3, the fully glycosylated monomeric unit of the dimeric cytotoxic bacterial metabolite (-)-lomaiviticin A (2). A novel strategy involving convergent, site- and stereoselective coupling of the β,γ-unsaturated ketone 6 and the naphthyl bromide 7 (92%, 15:1 diastereomeric ratio (dr)), followed by radical-based annulation and silyl ether cleavage, provided the tetracycle 5 (57% overall), which contains the carbon skeleton of the aglycon of 3. The β-linked 2,4,6-trideoxy-4-aminoglycoside l-pyrrolosamine was installed in 73% yield and with 15:1 β:α selectivity using a modified Koenigs-Knorr glycosylation. The diazo substituent was introduced via direct diazo transfer to an electron-rich benzoindene (4 → 27). The α-linked 2,6-dideoxyglycoside l-oleandrose was introduced by gold-catalyzed activation of an o-alkynyl glycosylbenzoate (75%, >20:1 α:β selectivity). A carefully orchestrated endgame sequence then provided efficient access to 3. Cell viability studies indicated that monomer 3 is not cytotoxic at concentrations up to 1 μM, providing conclusive evidence that the dimeric structure of (-)-lomaiviticin A (2) is required for cytotoxic effects. The preparation of 3 provides a foundation to complete the synthesis of (-)-lomaiviticin A (2) itself.
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Affiliation(s)
- Zhi Xu
- Department of Chemistry, Yale University, New Haven, Connecticut06520, United States
| | - Mikaela DiBello
- Department of Chemistry, Yale University, New Haven, Connecticut06520, United States
| | - Zechun Wang
- Department of Chemistry, Yale University, New Haven, Connecticut06520, United States
| | - John A Rose
- Department of Chemistry, Yale University, New Haven, Connecticut06520, United States
| | - Lei Chen
- Department of Chemistry, Yale University, New Haven, Connecticut06520, United States
| | - Xin Li
- Department of Chemistry, Yale University, New Haven, Connecticut06520, United States
| | - Seth B Herzon
- Department of Chemistry, Yale University, New Haven, Connecticut06520, United States.,Departments of Pharmacology and Therapeutic Radiology, Yale School of Medicine, New Haven, Connecticut06520, United States
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2
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Saikia P, Gogoi S. Recent advances in decarbonylative annulation reactions. Org Biomol Chem 2021; 19:8853-8873. [PMID: 34606552 DOI: 10.1039/d1ob00891a] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In recent years, decarbonylative annulation reactions have emerged as one of the most efficient routes to construct a variety of important carbocyclic and heterocyclic scaffolds. The main advantages of this type of reaction are, first, the carbonyl compounds are used as the starting materials which are abundant in nature and second, the major by-product of this reaction is carbon monoxide. In the last two decades, various intramolecular and intermolecular decarbonylative annulation reactions have been performed using carbonyl compounds and alkenes/alkynes/arenes/isocyanates etc. as the annulation partners. These reactions are typically performed either in the presence of or in the absence of a metal catalyst. However, these reactions are still in their infancy as a very little progress has been achieved in these reactions. Through this review article, it is attempted to highlight the recent developments on various decarbonylative annulation reactions which ultimately lead to the formation of important structural moieties.
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Affiliation(s)
- Pallabi Saikia
- Chemical Science and Technology Division, CSIR-North East Institute of Science and Technology, Jorhat-785006, AcSIR, Ghaziabad-201 002, India. .,Department of Chemistry, Mangaldai College, Post Mangaldai, Upahupara, 784125, Assam, India.
| | - Sanjib Gogoi
- Chemical Science and Technology Division, CSIR-North East Institute of Science and Technology, Jorhat-785006, AcSIR, Ghaziabad-201 002, India.
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3
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Kim LJ, Xue M, Li X, Xu Z, Paulson E, Mercado B, Nelson HM, Herzon SB. Structure Revision of the Lomaiviticins. J Am Chem Soc 2021; 143:6578-6585. [DOI: 10.1021/jacs.1c01729] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Lee Joon Kim
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, United States
| | - Mengzhao Xue
- Department of Chemistry, Yale University, New Haven, Connecticut 06511, United States
| | - Xin Li
- Department of Chemistry, Yale University, New Haven, Connecticut 06511, United States
| | - Zhi Xu
- Department of Chemistry, Yale University, New Haven, Connecticut 06511, United States
| | - Eric Paulson
- Department of Chemistry, Yale University, New Haven, Connecticut 06511, United States
- Chemical and Biological Instrumentation Center, Yale University, New Haven, Connecticut 06511, United States
| | - Brandon Mercado
- Department of Chemistry, Yale University, New Haven, Connecticut 06511, United States
- Chemical and Biological Instrumentation Center, Yale University, New Haven, Connecticut 06511, United States
| | - Hosea M. Nelson
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, United States
| | - Seth B. Herzon
- Department of Chemistry, Yale University, New Haven, Connecticut 06511, United States
- Department of Pharmacology, Yale School of Medicine, New Haven, Connecticut 06510, United States
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4
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Kaneko M, Li Z, Burk M, Colis L, Herzon SB. Synthesis and Biological Evaluation of (2 S,2' S)-Lomaiviticin A. J Am Chem Soc 2021; 143:1126-1132. [PMID: 33410680 PMCID: PMC8174553 DOI: 10.1021/jacs.0c11960] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
(-)-Lomaiviticin A (1) is a genotoxic C2-symmetric metabolite that arises from the formal dimerization of two bis(glycosylated) diazotetrahydrobenzo[b]fluorenes. Here we present a synthesis of the monomer 17 and its coupling to form (2S,2'S)-lomaiviticin A (4), an unnatural diastereomer of 1. (2S,2'S)-Lomaiviticin A (4) is significantly less genotoxic, a result we attribute to changes in the orientation of the diazofluorene and carbohydrate residues, relative to 1. These data bring the importance of the configuration of the conjoining bond to light and place the total synthesis of 1 itself within reach.
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Affiliation(s)
- Miho Kaneko
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Zhenwu Li
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Matthew Burk
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Laureen Colis
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Seth B. Herzon
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
- Department of Pharmacology, Yale School of Medicine, New Haven, Connecticut 06520, United States
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5
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Rose JA, Mahapatra S, Li X, Wang C, Chen L, Swick SM, Herzon SB. Synthesis of the bis(cyclohexenone) core of (-)-lomaiviticin A. Chem Sci 2020; 11:7462-7467. [PMID: 34123029 PMCID: PMC8159427 DOI: 10.1039/d0sc02770g] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
(-)-Lomaiviticin A is a complex C 2-symmetric bacterial metabolite comprising two diazotetrahydrobenzo[b]fluorene (diazofluorene) residues and four 2,6-dideoxy glycosides, α-l-oleandrose and N,N-dimethyl-β-l-pyrrolosamine. The two halves of lomaiviticin A are linked by a single carbon-carbon bond oriented syn with respect to the oleandrose residues. While many advances toward the synthesis of lomaiviticin A have been reported, including synthesis of the aglycon, a route to the bis(cyclohexenone) core bearing any of the carbohydrate residues has not been disclosed. Here we describe a short route to a core structure of lomaiviticin A bearing two α-l-oleandrose residues. The synthetic route features a Stille coupling to form the conjoining carbon-carbon bond of the target and a double reductive transposition to establish the correct stereochemistry at this bond. Two synthetic routes were developed to elaborate the reductive transposition product to the bis(cyclohexenone) target. The more efficient pathway features an interrupted Barton vinyl iodide synthesis followed by oxidative elimination of iodide to efficiently establish the enone functionalities in the target. The bis(cyclohexenone) product may find use in a synthesis of lomaiviticin A itself.
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Affiliation(s)
- John A Rose
- Department of Chemistry, Yale University New Haven Connecticut 06520 USA
| | - Subham Mahapatra
- Department of Chemistry, Yale University New Haven Connecticut 06520 USA
| | - Xin Li
- Department of Chemistry, Yale University New Haven Connecticut 06520 USA
| | - Chao Wang
- Department of Chemistry, Yale University New Haven Connecticut 06520 USA
| | - Lei Chen
- Department of Chemistry, Yale University New Haven Connecticut 06520 USA
| | - Steven M Swick
- Department of Chemistry, Yale University New Haven Connecticut 06520 USA
| | - Seth B Herzon
- Department of Chemistry, Yale University New Haven Connecticut 06520 USA .,Department of Pharmacology, Yale School of Medicine New Haven Connecticut 06520 USA
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6
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Wu Z, Reetz MT, Harms K. Crystal structure of 7,8,9,10-tetra-hydro-benzo[b]naphtho-[2,1-d]furan. Acta Crystallogr E Crystallogr Commun 2016; 72:106-8. [PMID: 26870597 PMCID: PMC4704761 DOI: 10.1107/s2056989015024512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2015] [Accepted: 12/21/2015] [Indexed: 11/11/2022]
Abstract
In the title compound, C16H14O, the cyclo-hexene ring has a half-chair conformation. The mean plane, calculated through all non-H atoms of the mol-ecule, except for the central CH2 atoms of the cyclo-hexene ring, which deviate by 0.340 (3) and -0.369 (3) Å from this mean plane, has an r.m.s. deviation of 0.012 Å. In the crystal, there are C-H⋯π contacts present, resulting in the formation of zigzag chains propagating along the [010] direction.
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Affiliation(s)
- Zhongyuan Wu
- Fachbereich Chemie, Philipps-Universität, Hans-Meerwein-Strasse 4, 35032 Marburg, Germany
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim, Germany
| | - Manfred T. Reetz
- Fachbereich Chemie, Philipps-Universität, Hans-Meerwein-Strasse 4, 35032 Marburg, Germany
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim, Germany
| | - Klaus Harms
- Fachbereich Chemie, Philipps-Universität, Hans-Meerwein-Strasse 4, 35032 Marburg, Germany
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7
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Multigram synthesis of 1- O -acetyl-3- O -(4-methoxybenzyl)-4- N -(9-fluorenylmethoxycarbonyl)-4- N -methyl- l -pyrrolosamine. Tetrahedron Lett 2015; 56:3231-3234. [DOI: 10.1016/j.tetlet.2014.12.073] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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8
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Cai S, Xiao Z, Shi Y, Gao S. The Photo-Nazarov Reaction: Scope and Application. Chemistry 2014; 20:8677-81. [DOI: 10.1002/chem.201402993] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2014] [Indexed: 11/09/2022]
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9
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Bos PH, Antalek MT, Porco JA, Stephenson CRJ. Tandem dienone photorearrangement-cycloaddition for the rapid generation of molecular complexity. J Am Chem Soc 2013; 135:17978-82. [PMID: 24161069 PMCID: PMC3964885 DOI: 10.1021/ja409992m] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
A tandem dienone photorearrangement-cycloaddition (DPC) reaction of novel cyclohexadienone substrates tethered with various 2π and 4π reaction partners resulted in the formation of polycyclic, bridged frameworks. In particular, use of alkynyl ether-tethered substrates led to (3 + 2) cycloaddition to afford strained alkenes which could be further elaborated by intra- and intermolecular cycloaddition chemistry to produce complex, polycyclic chemotypes.
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Affiliation(s)
- Pieter H. Bos
- Department of Chemistry, Center for Chemical Methodology and Library Development (CMLD-BU) Boston University, 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States
| | - Mitchell T. Antalek
- Department of Chemistry, Center for Chemical Methodology and Library Development (CMLD-BU) Boston University, 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States
| | - John A. Porco
- Department of Chemistry, Center for Chemical Methodology and Library Development (CMLD-BU) Boston University, 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States
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10
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Costa P, Linhares M, Rebelo SLH, Neves MGPMS, Freire C. Direct access to polycyclic peripheral diepoxy-meso-quinone derivatives from acene catalytic oxidation. RSC Adv 2013. [DOI: 10.1039/c3ra23407j] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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11
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Yeung KS, Peng XS, Wu J, Fan R, Hou XL. Five-Membered Ring Systems. PROGRESS IN HETEROCYCLIC CHEMISTRY 2013. [DOI: 10.1016/b978-0-08-099406-2.00008-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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12
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Woo CM, Gholap SL, Lu L, Kaneko M, Li Z, Ravikumar PC, Herzon SB. Development of enantioselective synthetic routes to (-)-kinamycin F and (-)-lomaiviticin aglycon. J Am Chem Soc 2012; 134:17262-73. [PMID: 23030272 PMCID: PMC3505684 DOI: 10.1021/ja307497h] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
The development of enantioselective synthetic routes to (-)-kinamycin F (9) and (-)-lomaiviticin aglycon (6) are described. The diazotetrahydrobenzo[b]fluorene (diazofluorene) functional group of the targets was prepared by fluoride-mediated coupling of a β-trimethylsilylmethyl-α,β-unsaturated ketone (38) with an oxidized naphthoquinone (19), palladium-catalyzed cyclization (39→37), and diazo transfer (37→53). The D-ring precursors 60 and 68 were prepared from m-cresol and 3-ethylphenol, respectively. Coupling of the β-trimethylsilylmethyl-α,β-unsaturated ketone 60 with the juglone derivative 61, cyclization, and diazo transfer provided the advanced diazofluorene 63, which was elaborated to (-)-kinamycin F (9) in three steps. The diazofluorene 87 was converted to the C(2)-symmetric lomaiviticin aglycon precursor 91 by enoxysilane formation and oxidative dimerization with manganese tris(hexafluoroacetylacetonate) (94, 26%). The stereochemical outcome in the coupling is attributed to the steric bias engendered by the mesityl acetal of 87 and contact ion pairing of the intermediates. The coupling product 91 was deprotected (tert-butylhydrogen peroxide, trifluoroacetic acid-dichloromethane) to form mixtures of the chain isomer of lomaiviticin aglycon 98 and the ring isomer 6. These mixtures converged on purification or standing to the ring isomer 6 (39-41% overall). The scope of the fluoride-mediated coupling process is delineated (nine products, average yield = 72%); a related enoxysilane quinonylation reaction is also described (10 products, average yield = 77%). We establish that dimeric diazofluorenes undergo hydrodediazotization 2-fold faster than related monomeric diazofluorenes. This enhanced reactivity may underlie the cytotoxic effects of (-)-lomaiviticin A (1). The simple diazofluorene 103 is a potent inhibitor of ovarian cancer stem cells (IC(50) = 500 nM).
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Affiliation(s)
- Christina M. Woo
- Department of Chemistry, Yale University, New Haven, CT 06520, United States
| | | | - Liang Lu
- Department of Chemistry, Yale University, New Haven, CT 06520, United States
| | - Miho Kaneko
- Department of Chemistry, Yale University, New Haven, CT 06520, United States
| | - Zhenwu Li
- Department of Chemistry, Yale University, New Haven, CT 06520, United States
| | - P. C. Ravikumar
- Department of Chemistry, Yale University, New Haven, CT 06520, United States
| | - Seth B. Herzon
- Department of Chemistry, Yale University, New Haven, CT 06520, United States
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13
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Woo CM, Beizer NE, Janso JE, Herzon SB. Isolation of Lomaiviticins C–E, Transformation of Lomaiviticin C to Lomaiviticin A, Complete Structure Elucidation of Lomaiviticin A, and Structure–Activity Analyses. J Am Chem Soc 2012; 134:15285-8. [DOI: 10.1021/ja3074984] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Christina M. Woo
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United
States
| | - Nina E. Beizer
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United
States
| | - Jeffrey E. Janso
- Natural Products
− Worldwide
Medicinal Chemistry, Pfizer Worldwide Research and Development, 445 Eastern Point Road, Groton, Connecticut 06340, United States
| | - Seth B. Herzon
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United
States
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