1
|
Jaiswal MK, Yadav MS, Singh M, Garai S, Tiwari VK. Silicomolybdic Acid Cluster as Biocompatible Catalyst for One-Pot Tandem Synthesis of Orthogonally Protected Glycosides. J Org Chem 2024; 89:10698-10708. [PMID: 39036827 DOI: 10.1021/acs.joc.4c00923] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/23/2024]
Abstract
The present paper describes a new and practical approach for the one-pot preparation of O-isopropylidene derivatives and also orthogonally protected S- and O-glycosides from the corresponding unprotected saccharides by employing 2 mol % of a silicomolybdic acid (SMA) cluster as a versatile and biocompatible catalyst. The present protocol is applicable to two-step one-pot tandem transformations, which include the O-isopropylidation, spiroketal functionalization, 4,6-O-arylidene acetalations, and arylidene acetylation processes under relatively mild reaction conditions. One-pot sequential transformations, low catalyst loading, rapid transformation, high to excellent reaction yields, mild reaction conditions, and a nontoxic biocompatible workup procedure are the notable advantages of devised protocol.
Collapse
Affiliation(s)
- Manoj K Jaiswal
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Mangal S Yadav
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Mayank Singh
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Somenath Garai
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Vinod K Tiwari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| |
Collapse
|
2
|
Sommerfeld IK, Palm P, Hussnaetter KP, Pieper MI, Bulut S, Lile T, Wagner R, Walkowiak JJ, Elling L, Pich A. Microgels with Immobilized Glycosyltransferases for Enzymatic Glycan Synthesis. Biomacromolecules 2024; 25:3807-3822. [PMID: 38807305 DOI: 10.1021/acs.biomac.4c00409] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/30/2024]
Abstract
Glycans, composed of linked monosaccharides, play crucial roles in biology and find diverse applications. Enhancing their enzymatic synthesis can be achieved by immobilizing enzymes on materials such as microgels. Here, we present microgels with immobilized glycosyltransferases, synthesized through droplet microfluidics, immobilizing enzymes either via encapsulation or postattachment. SpyTag-SpyCatcher interaction was used for enzyme binding, among others. Fluorescamine and permeability assays confirmed enzyme immobilization and microgel porosity, while enzymatic activities were determined using HPLC. The potential application of microgels in cascade reactions involving multiple enzymes was demonstrated by combining β4GalT and α3GalT in an enzymatic reaction with high yields. Moreover, a cascade of β4GalT and β3GlcNAcT was successfully implemented. These results pave the way toward a modular membrane bioreactor for automated glycan synthesis containing the presented biocatalytic microgels.
Collapse
Affiliation(s)
- Isabel Katja Sommerfeld
- Functional and Interactive Polymers, Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 2, Aachen 52074, Germany
- DWI─Leibniz-Institute for Interactive Materials e.V., Forckenbeckstraße 50, Aachen 52074, Germany
| | - Philip Palm
- Laboratory for Biomaterials, Helmholtz Institute for Biomedical Engineering, RWTH Aachen University, Pauwelsstr. 20, Aachen 52074, Germany
| | - Kai Philip Hussnaetter
- Laboratory for Biomaterials, Helmholtz Institute for Biomedical Engineering, RWTH Aachen University, Pauwelsstr. 20, Aachen 52074, Germany
| | - Maria Isabell Pieper
- Functional and Interactive Polymers, Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 2, Aachen 52074, Germany
- DWI─Leibniz-Institute for Interactive Materials e.V., Forckenbeckstraße 50, Aachen 52074, Germany
| | - Selin Bulut
- Functional and Interactive Polymers, Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 2, Aachen 52074, Germany
- DWI─Leibniz-Institute for Interactive Materials e.V., Forckenbeckstraße 50, Aachen 52074, Germany
| | - Tudor Lile
- Functional and Interactive Polymers, Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 2, Aachen 52074, Germany
- DWI─Leibniz-Institute for Interactive Materials e.V., Forckenbeckstraße 50, Aachen 52074, Germany
| | - Rebekka Wagner
- Laboratory for Biomaterials, Helmholtz Institute for Biomedical Engineering, RWTH Aachen University, Pauwelsstr. 20, Aachen 52074, Germany
| | - Jacek Janusz Walkowiak
- Functional and Interactive Polymers, Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 2, Aachen 52074, Germany
- DWI─Leibniz-Institute for Interactive Materials e.V., Forckenbeckstraße 50, Aachen 52074, Germany
- Aachen Maastricht Institute for Biobased Materials (AMIBM), Maastricht University, Brightlands Chemelot Campus, Urmonderbaan 22, RD Geleen 6167, The Netherlands
| | - Lothar Elling
- Laboratory for Biomaterials, Helmholtz Institute for Biomedical Engineering, RWTH Aachen University, Pauwelsstr. 20, Aachen 52074, Germany
| | - Andrij Pich
- Functional and Interactive Polymers, Institute of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 2, Aachen 52074, Germany
- DWI─Leibniz-Institute for Interactive Materials e.V., Forckenbeckstraße 50, Aachen 52074, Germany
- Aachen Maastricht Institute for Biobased Materials (AMIBM), Maastricht University, Brightlands Chemelot Campus, Urmonderbaan 22, RD Geleen 6167, The Netherlands
| |
Collapse
|
3
|
Chen S, Wei F, Cheng X, Luo Y, Meng F, Zhang Y, Huang W, Lv J, Pan H, Wu Q, Zhao G. Regioselective Deacetylation of Peracetylated Deoxy- C-glycopyranosides by Boron Trichloride (BCl 3). J Org Chem 2024; 89:4802-4817. [PMID: 38477972 DOI: 10.1021/acs.joc.4c00026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/14/2024]
Abstract
A general approach for regioselective deacetylation at sugar 3-OH of peracetylated 6-deoxy-C-glucopyranosides mediated by BCl3 was developed. The approach could be extended to other sugar-derived 6-deoxy-C-glycopyranosides, such as those derived from mannose, galactose, and rhamnose, with deacetylation occurring at varied sugar hydroxyl groups, and further extended to 4-deoxy-C-glucopyranosides with deacetylation occurring at sugar 3-OH. The approach would enable access to synthetically challenging carbohydrate derivatives. A possible mechanism of the regioselectivity was proposed.
Collapse
Affiliation(s)
- Shuangyuan Chen
- College of Pharmacy, Guizhou Medical University, Guiyang 561113, China
- Zhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
| | - Feifei Wei
- College of Pharmacy, Guizhou Medical University, Guiyang 561113, China
- Zhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
| | - Xinqiang Cheng
- Zhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
| | - Ying Luo
- Zhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
- School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou 510006, China
| | - Fancui Meng
- National Key Laboratory of Druggability Evaluation and Systematic Translational Medicine, Tianjin Institute of Pharmaceutical Research, Tianjin 300301, China
| | - Yuanwen Zhang
- Zhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
- School of Chinese Medicinal Resource, Guangdong Pharmaceutical University, Guangzhou 510006, China
| | - Wenqian Huang
- Zhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
- Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jun Lv
- Zhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
- Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hong Pan
- School of Intelligent Medical Technology, Dazhou Vocational and Technical College, Dazhou 635001, China
| | - Qingqing Wu
- Zhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
| | - Guilong Zhao
- College of Pharmacy, Guizhou Medical University, Guiyang 561113, China
- Zhongshan Institute for Drug Discovery, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Zhongshan 528400, China
- Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| |
Collapse
|
4
|
Forsythe NP, Mize ER, Kashiwagi GA, Demchenko AV. Expedient Synthesis of Superarmed Glycosyl Donors via Oxidative Thioglycosidation of Glycals. SYNTHESIS-STUTTGART 2024; 56:1147-1156. [PMID: 38655286 PMCID: PMC11034933 DOI: 10.1055/a-2183-0175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
Abstract
Superarmed glycosyl donors have higher reactivity compared to their perbenzylated armed counterparts. Generally, the 2-O- benzoyl-3,4,6-tri-O-benzyl protecting group pattern gives rise to increased reactivity due to an O-2/O-5 cooperative effect. Despite having a high reactivity profile and applicability in many expeditious strategies for glycan synthesis, regioselective introduction of the superarming protecting group pattern is tedious for most sugar series. Reported herein is a streamlined synthetic route to yield superarmed glycosyl donors of the d-gluco and d-galacto series equipped with an ethylthio, phenylthio, p-tolylthio, benzoxazol-2-ylthio, O-allyl, or O-pentenyl anomeric leaving group. This streamlined approach was made possible due to the refinement of the oxidative thioglycosylation reaction of the respective glucal and galactal precursors. The applicability of this approach to the direct formation of disaccharides is also showcased.
Collapse
Affiliation(s)
- Nicholas P Forsythe
- Department of Chemistry, Saint Louis University, 3501 Laclede Ave, St. Louis, MO 63103, USA
| | - Emma R Mize
- Department of Chemistry, Saint Louis University, 3501 Laclede Ave, St. Louis, MO 63103, USA
| | - Gustavo A Kashiwagi
- Department of Chemistry, Saint Louis University, 3501 Laclede Ave, St. Louis, MO 63103, USA
| | - Alexei V Demchenko
- Department of Chemistry, Saint Louis University, 3501 Laclede Ave, St. Louis, MO 63103, USA
| |
Collapse
|
5
|
Abstract
The structural complexity of glycans poses a serious challenge in the chemical synthesis of glycosides, oligosaccharides and glycoconjugates. Glycan complexity, determined by composition, connectivity, and configuration far exceeds what nature achieves with nucleic acids and proteins. Consequently, glycoside synthesis ranks among the most complex tasks in organic synthesis, despite involving only a simple type of bond-forming reaction. Here, we introduce the fundamental principles of glycoside bond formation and summarize recent advances in glycoside bond formation and oligosaccharide synthesis.
Collapse
Affiliation(s)
- Conor J Crawford
- Department of Biomolecular Systems, Max Planck Institute for Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany.
| | - Peter H Seeberger
- Department of Biomolecular Systems, Max Planck Institute for Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany.
- Institute for Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| |
Collapse
|
6
|
Hussnaetter KP, Palm P, Pich A, Franzreb M, Rapp E, Elling L. Strategies for Automated Enzymatic Glycan Synthesis (AEGS). Biotechnol Adv 2023; 67:108208. [PMID: 37437855 DOI: 10.1016/j.biotechadv.2023.108208] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 06/30/2023] [Accepted: 07/07/2023] [Indexed: 07/14/2023]
Abstract
Glycans are the most abundant biopolymers on earth and are constituents of glycoproteins, glycolipids, and proteoglycans with multiple biological functions. The availability of different complex glycan structures is of major interest in biotechnology and basic research of biological systems. High complexity, establishment of general and ubiquitous synthesis techniques, as well as sophisticated analytics, are major challenges in the development of glycan synthesis strategies. Enzymatic glycan synthesis with Leloir-glycosyltransferases is an attractive alternative to chemical synthesis as it can achieve quantitative regio- and stereoselective glycosylation in a single step. Various strategies for synthesis of a wide variety of different glycan structures has already be established and will exemplarily be discussed in the scope of this review. However, the application of enzymatic glycan synthesis in an automated system has high demands on the equipment, techniques, and methods. Different automation approaches have already been shown. However, while these techniques have been applied for several glycans, only a few strategies are able to conserve the full potential of enzymatic glycan synthesis during the process - economical and enzyme technological recycling of enzymes is still rare. In this review, we show the major challenges towards Automated Enzymatic Glycan Synthesis (AEGS). First, we discuss examples for immobilization of glycans or glycosyltransferases as an important prerequisite for the embedment and implementation in an enzyme reactor. Next, improvement of bioreactors towards automation will be described. Finally, analysis and monitoring of the synthesis process are discussed. Furthermore, automation processes and cycle design are highlighted. Accordingly, the transition of recent approaches towards a universal automated glycan synthesis platform will be projected. To this end, this review aims to describe essential key features for AEGS, evaluate the current state-of-the-art and give thought- encouraging impulses towards future full automated enzymatic glycan synthesis.
Collapse
Affiliation(s)
- Kai Philip Hussnaetter
- Laboratory for Biomaterials, Institute for Biotechnology and Helmholtz-Institute for Biomedical Engineering, RWTH Aachen University, Pauwelsstraße 20, D-52074 Aachen, Germany
| | - Philip Palm
- Laboratory for Biomaterials, Institute for Biotechnology and Helmholtz-Institute for Biomedical Engineering, RWTH Aachen University, Pauwelsstraße 20, D-52074 Aachen, Germany
| | - Andrij Pich
- Functional and Interactive Polymers, Institute of Technical and Macromolecular Chemistry and DWI Leibniz-Institute for Interactive Materials e.V., RWTH Aachen University, Forckenbeckstr. 50, 52074 Aachen, Germany
| | - Matthias Franzreb
- Karlsruher Institute of Technology (KIT), Institute of Functional Interfaces, Hermann v. Helmholtz, Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
| | - Erdmann Rapp
- glyXera GmbH, Brenneckestrasse 20 * ZENIT, 39120 Magdeburg, Germany; Max Planck Institute for Dynamics of Complex Technical System, Bioprocess Engineering, Sandtorstrasse 1, 39106 Magdeburg, Germany
| | - Lothar Elling
- Laboratory for Biomaterials, Institute for Biotechnology and Helmholtz-Institute for Biomedical Engineering, RWTH Aachen University, Pauwelsstraße 20, D-52074 Aachen, Germany.
| |
Collapse
|
7
|
Yeh CH, Chang YJ, Lin TJ, Wang CC. Total Synthesis of Campylobacter jejuni NCTC11168 Capsular Polysaccharide via the Intramolecular Anomeric Protection Strategy. J Am Chem Soc 2023; 145:9003-9010. [PMID: 37040604 DOI: 10.1021/jacs.3c00102] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/13/2023]
Abstract
The infection of Campylobacter jejuni results in a significant diarrhea disease, which is highly fatal to young children in unindustrialized countries. Developing a new therapy is required due to increasing antibiotic resistance. Herein, we described a total synthesis of a C. jejuni NCTC11168 capsular polysaccharide repeating unit containing a linker moiety via an intramolecular anomeric protection (iMAP) strategy. This one-step 1,6-protecting method structured the challenging furanosyl galactosamine configuration, facilitated further concise regioselective protection, and smoothed the heptose synthesis. The tetrasaccharide was constructed in a [2 + 1 + 1] manner. The synthesis of this complicated CPS tetrasaccharide was completed in merely 28 steps, including the preparation of all the building blocks, construction of the tetrasaccharide skeleton, and functional group transformations.
Collapse
Affiliation(s)
- Chun-Hong Yeh
- Institute of Chemistry, Academia Sinica, 128 Section 2, Academia Road, Taipei 115, Taiwan
- Chemical Biology and Molecular Biophysics (CBMB), Taiwan International Graduate Program (TIGP), Academia Sinica, 128 Section 2, Academia Road, Taipei 115, Taiwan
- Department of Chemistry, National Tsing Hua University, 101 Section 2, Kuang-Fu Road, Hsinchu 300, Taiwan
| | - Ya-Jou Chang
- Chemical Biology and Molecular Biophysics (CBMB), Taiwan International Graduate Program (TIGP), Academia Sinica, 128 Section 2, Academia Road, Taipei 115, Taiwan
- Genomics Research Center, Academia Sinica, 128 Section 2, Academia Road, Taipei 115, Taiwan
- Graduate Institute of Biochemical Sciences, National Taiwan University, 1 Section 4, Roosevelt Road, Taipei 106, Taiwan
| | - Tsung-Juin Lin
- Institute of Chemistry, Academia Sinica, 128 Section 2, Academia Road, Taipei 115, Taiwan
- Department of Chemistry, National Central University, 300 Zhong-da Road, Zhong Li, Taoyuan 320, Taiwan
| | - Cheng-Chung Wang
- Institute of Chemistry, Academia Sinica, 128 Section 2, Academia Road, Taipei 115, Taiwan
- Chemical Biology and Molecular Biophysics (CBMB), Taiwan International Graduate Program (TIGP), Academia Sinica, 128 Section 2, Academia Road, Taipei 115, Taiwan
| |
Collapse
|
8
|
Rana A, Misra AK. Synthesis of the acidic pentasaccharide repeating unit of the cell wall O-antigen of Providencia alcalifaciens O45:H25 strain. Tetrahedron 2023. [DOI: 10.1016/j.tet.2023.133379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/30/2023]
|
9
|
Sanaullah AFM, Devi P, Hossain T, Sultan SB, Badhon MMU, Hossain ME, Uddin J, Patwary MAM, Kazi M, Matin MM. Rhamnopyranoside-Based Fatty Acid Esters as Antimicrobials: Synthesis, Spectral Characterization, PASS, Antimicrobial, and Molecular Docking Studies. Molecules 2023; 28:molecules28030986. [PMID: 36770652 PMCID: PMC9919056 DOI: 10.3390/molecules28030986] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2022] [Revised: 01/07/2023] [Accepted: 01/10/2023] [Indexed: 01/21/2023] Open
Abstract
The most widely used and accessible monosaccharides have a number of stereogenic centers that have been hydroxylated and are challenging to chemically separate. As a result, the task of regioselective derivatization of such structures is particularly difficult. Considering this fact and to get novel rhamnopyranoside-based esters, DMAP-catalyzed di-O-stearoylation of methyl α-l-rhamnopyranoside (3) produced a mixture of 2,3-di-O- (4) and 3,4-di-O-stearates (5) (ratio 2:3) indicating the reactivity of the hydroxylated stereogenic centers of rhamnopyranoside as 3-OH > 4-OH > 2-OH. To get novel biologically active rhamnose esters, di-O-stearates 4 and 5 were converted into six 4-O- and 2-O-esters 6-11, which were fully characterized by FT-IR, 1H, and 13C NMR spectral techniques. In vitro antimicrobial assays revealed that fully esterified rhamnopyranosides 6-11 with maximum lipophilic character showed better antifungal susceptibility than antibacterial activity. These experimental findings are similar to the results found from PASS analysis data. Furthermore, the pentanoyl derivative of 2,3-di-O-stearate (compound 6) showed better antifungal functionality against F. equiseti and A. flavus, which were found to be better than standard antibiotics. To validate the better antifungal results, molecular docking of the rhamnose esters 4-11 was performed with lanosterol 14α-demethylase (PDB ID: 3LD6), including the standard antifungal antibiotics ketoconazole and fluconazole. In this instance, the binding affinities of 10 (-7.6 kcal/mol), 9 (-7.5 kcal/mol), and 7 (-6.9 kcal/mol) were better and comparable to fluconazole (-7.3 kcal/mol), indicating the likelihood of their use as non-azole type antifungal drugs in the future.
Collapse
Affiliation(s)
- Abul Fazal Muhammad Sanaullah
- Bioorganic and Medicinal Chemistry Laboratory, Department of Chemistry, Faculty of Science, University of Chittagong, Chittagong 4331, Bangladesh
| | - Puja Devi
- Bioorganic and Medicinal Chemistry Laboratory, Department of Chemistry, Faculty of Science, University of Chittagong, Chittagong 4331, Bangladesh
| | - Takbir Hossain
- Bioorganic and Medicinal Chemistry Laboratory, Department of Chemistry, Faculty of Science, University of Chittagong, Chittagong 4331, Bangladesh
| | - Sulaiman Bin Sultan
- Bioorganic and Medicinal Chemistry Laboratory, Department of Chemistry, Faculty of Science, University of Chittagong, Chittagong 4331, Bangladesh
| | - Mohammad Mohib Ullah Badhon
- Bioorganic and Medicinal Chemistry Laboratory, Department of Chemistry, Faculty of Science, University of Chittagong, Chittagong 4331, Bangladesh
| | - Md. Emdad Hossain
- Wazed Miah Science Research Centre (WMSRC), Jahangirnagar University, Savar, Dhaka 1342, Bangladesh
| | - Jamal Uddin
- Center for Nanotechnology, Department of Natural Sciences, Coppin State University, Baltimore, MD 21216, USA
| | | | - Mohsin Kazi
- Department of Pharmaceutics, College of Pharmacy, King Saud University, P.O. Box 2457, Riyadh 11451, Saudi Arabia
- Correspondence: (M.K.); (M.M.M.); Tel.: +880-1716-839689 (M.M.M.)
| | - Mohammed Mahbubul Matin
- Bioorganic and Medicinal Chemistry Laboratory, Department of Chemistry, Faculty of Science, University of Chittagong, Chittagong 4331, Bangladesh
- Correspondence: (M.K.); (M.M.M.); Tel.: +880-1716-839689 (M.M.M.)
| |
Collapse
|
10
|
Njeri DK, Ragains JR. Total Synthesis of a Pentasaccharide O-Glycan from Acinetobacter baumannii. European J Org Chem 2022; 2022:e202201261. [PMID: 36876192 PMCID: PMC9983622 DOI: 10.1002/ejoc.202201261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Indexed: 12/23/2022]
Abstract
Acinetobacter baumannii is a Gram-negative bacteria associated with drug resistance and infection in healthcare settings. An understanding of both the biological roles and antigenicity of surface molecules of this organism may provide an important step in the prevention and treatment of infection through vaccination or the development of monoclonal antibodies. With this in mind, we have performed the multistep synthesis of a conjugation-ready pentasaccharide O-glycan from A. baumannii with a longest linear synthetic sequence of 19 steps. This target is particularly relevant due to its role in both fitness and virulence across an apparently broad range of clinically relevant strains. Synthetic challenges include formulating an effective protecting group scheme as well as the installation of a particularly difficult glycosidic linkage between the anomeric position of a 2,3-diacetamido-2,3-dideoxy-D-glucuronic acid and the 4-position of D-galactose.
Collapse
Affiliation(s)
- Dancan K Njeri
- Department of Chemistry, Louisiana State University, 232 Choppin Hall, Baton Rouge, LA 70803
| | - Justin R Ragains
- Department of Chemistry, Louisiana State University, 232 Choppin Hall, Baton Rouge, LA 70803
| |
Collapse
|
11
|
Luo T, Xu TT, Guo YF, Dong H. SnCl 4 Promoted Efficient Cleavage of Acetal/Ketal Groups with the Assistance of Water in CH 2Cl 2. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27238258. [PMID: 36500346 PMCID: PMC9736348 DOI: 10.3390/molecules27238258] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/27/2022] [Revised: 11/23/2022] [Accepted: 11/24/2022] [Indexed: 11/29/2022]
Abstract
Acetalization and deacetalation are a pair of routine manipulations to protect and deprotect the 4- and 6-hydroxyl groups of glycosides in the synthesis of glycosyl building blocks. In this study, we found that treatment of SnCl4 with various carbohydrates containing acetal/ketal groups with the assistance of water in CH2Cl2 led to deacetalization/deketalization products in almost quantitative yields. In addition, for substrates containing both acetal/ketal and p-methoxylbenzyl groups, we also found that the p-methoxylbenzyl group was selectively cleaved by the use of a catalytic amount of SnCl4, while the acetal/ketal groups remained. Furthermore, based on this, 4,6-benzylidene glycosides can be conveniently converted to 4,6-OAc or 4-OH, 6-OAc glycosides.
Collapse
|
12
|
Shekunti RK, Tangalipalli S, Dhonthulachitty C, Kothakapu SR, Annapurna PD, Neella CK. N
‐Benzoyl‐4‐dimethylaminopyridinium Chloride: A Lewis Base Adduct for Efficient Poly and Monobenzoylation. ChemistrySelect 2022. [DOI: 10.1002/slct.202202636] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
| | - Swathi Tangalipalli
- Dept. of M.Sc.Chemistry Palamuru University Raichur Road Mahabubnagar Telangana 509001 India
| | | | - Sridhar Reddy Kothakapu
- Dept. of M.Sc. 5yr Integrated Chemistry Palamuru University Raichur Road Mahabubnagar Telangana 509001 India
| | | | - Chandra Kiran Neella
- Dept. of M.Sc.Chemistry Palamuru University Raichur Road Mahabubnagar Telangana 509001 India
| |
Collapse
|
13
|
Indium(III) bromide-mediated β-selective thioglycosylation of 1,2,4-O-orthoacetylglucose derivatives. Carbohydr Res 2022; 519:108609. [PMID: 35728391 DOI: 10.1016/j.carres.2022.108609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Revised: 05/24/2022] [Accepted: 06/06/2022] [Indexed: 11/23/2022]
Abstract
1,2,4-O-Orthoacetyl-α-d-glucose possesses a skew-boat glucopyranose ring whose steric strain is expected to show high reactivity. This study describes the β-selective thioglycosylation of 1,2,4-O-orthoacetyl-α-d-glucose. Indium(III) bromide catalyzes the reaction in trifluoromethylbenzene at ambient temperature in the presence of molecular sieves 4A, resulting in the corresponding thioglycoside product with perfect β-selectivity and high yields. The presented glycosylation might be useful for the synthesis of functional molecules and natural products possessing sugar moieties.
Collapse
|
14
|
Kong Y, Yang B, Zhang J, Dong C. Research progress on hydroxyl protection of iridoid glycosides. Aust J Chem 2022. [DOI: 10.1071/ch21260] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Iridoids, an important active ingredient, are widely distributed in varieties of Chinese herbal medicines and have varieties of pharmacological activities, such as anti-tumor, hypoglycemic, anti-inflammatory and so on, most of which exist in the form of glycosides in nature. However, its clinical application is limited by poor lipid solubility, low bioavailability and short half-life. It is necessary to optimize the structure of iridoids. It is hard to modify the hydroxyl groups at specific sites because iridoid glycosides are polyhydroxy compounds and very complex. In this paper, the words of ‘Iridoid glycosides’ and ‘Hydroxyl protection’ were used as the keywords, more than 200 articles from 1965 to 2021 were obtained from databases, such as CNKI, PubMed, Scifinder and so on. Finally, 60 articles were selected to summarize the hydroxyl protection of iridoid glycosides, which will provide a theoretical basis for their structural modification and stimulate their application potential in the field of drug research and development.
Collapse
|
15
|
Martin JL, Sati GC, Malakar T, Hatt J, Zimmerman PM, Montgomery J. Glycosyl Exchange of Unactivated Glycosidic Bonds: Suppressing or Embracing Side Reactivity in Catalytic Glycosylations. J Org Chem 2022; 87:5817-5826. [PMID: 35413188 PMCID: PMC9173671 DOI: 10.1021/acs.joc.2c00132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
While developing boron-catalyzed glycosylations using glycosyl fluoride donors and trialkylsilyl ether acceptors, competing pathways involving productive glycosylation or glycosyl exchange were observed. Experimental and computational mechanistic studies suggest a novel mode of reactivity where a dioxolenium ion is a key intermediate that promotes both pathways through addition to either a silyl ether or to the acetal of an existing glycosidic linkage. Modifications in catalyst structure enable either pathway to be favored, and with this understanding, improved multicomponent iterative couplings and glycosyl exchange processes were demonstrated.
Collapse
Affiliation(s)
- Joshua L Martin
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - Girish C Sati
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - Tanmay Malakar
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - Jessica Hatt
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - Paul M Zimmerman
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| | - John Montgomery
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, United States
| |
Collapse
|
16
|
Kim T, Bell MR, Thota VN, Lowary TL. One-Pot Regioselective Diacylation of Pyranoside 1,2- cis Diols. J Org Chem 2022; 87:4894-4907. [PMID: 35290061 DOI: 10.1021/acs.joc.2c00252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A one-pot strategy for functionalizing pyranoside 1,2-cis-diols with two different ester protecting groups is reported. The approach employs regioselective acylation via orthoester hydrolysis promoted by a carboxylic acid, e.g., levulinic acid, acetic acid, benzoic acid, or chloroacetic acid. Upon removal of water and introduction of a coupling agent, the carboxylic acid is esterified to the hydroxyl group liberated during hydrolysis. Although applied to 1,2-cis-diols on pyranoside scaffolds, the method should be applicable to such motifs on any six-membered ring.
Collapse
Affiliation(s)
- Taeok Kim
- Department of Chemistry, University of Alberta, Edmonton, Alberta, Canada, T6G 2G2
| | - Michael R Bell
- Department of Chemistry, University of Alberta, Edmonton, Alberta, Canada, T6G 2G2
| | - V Narasimharao Thota
- Department of Chemistry, University of Alberta, Edmonton, Alberta, Canada, T6G 2G2
| | - Todd L Lowary
- Department of Chemistry, University of Alberta, Edmonton, Alberta, Canada, T6G 2G2.,Institute of Biological Chemistry, Academia Sinica, Academia Road, Section 2, #128, Nangang, Taipei, 11529, Taiwan.,Institute of Biochemical Sciences, National Taiwan University, Roosevelt Road, Section 4, #1, Taipei, 10617, Taiwan
| |
Collapse
|
17
|
Lv J, Liu CY, Guo YF, Feng GJ, Dong H. SnCl2‐catalyzed acetalation/selective‐benzoylation sequence for the synthesis of orthogonally protected glycosyl acceptors. European J Org Chem 2022. [DOI: 10.1002/ejoc.202101565] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Jian Lv
- Huazhong University of Science and Technology - Main Campus: Huazhong University of Science and Technology School of Chemistry and Chemical Engineering CHINA
| | - Chun-Yang Liu
- Huazhong University of Science and Technology - Main Campus: Huazhong University of Science and Technology School of Chemistry and Chemical Engineering CHINA
| | - Yang-Fan Guo
- Huazhong University of Science and Technology - Main Campus: Huazhong University of Science and Technology School of Chemistry and Chemical Engineering CHINA
| | - Guang-Jing Feng
- Huazhong University of Science and Technology - Main Campus: Huazhong University of Science and Technology School of Chemistry and Chemical Engineering CHINA
| | - Hai Dong
- Huazhong University of Science and Technology - Main Campus: Huazhong University of Science and Technology School of Chemistry & Chemical Engineering Luoyu Road 1037 430074 Wuhan CHINA
| |
Collapse
|
18
|
Small tools for sweet challenges: advances in microfluidic technologies for glycan synthesis. Anal Bioanal Chem 2022; 414:5139-5163. [PMID: 35199190 DOI: 10.1007/s00216-022-03948-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2021] [Revised: 01/26/2022] [Accepted: 01/31/2022] [Indexed: 11/01/2022]
Abstract
Glycans, including oligosaccharides and glycoconjugates, play an integral role in modulating the biological functions of macromolecules. Many physiological and pathological processes are mediated by interactions between glycans, which has led to the use of glycans as biosensors for pathogen and biomarker detection. Elucidating the relationship between glycan structure and biological function is critical for advancing our understanding of the impact glycans have on human health and disease and for expanding the repertoire of glycans available for bioanalysis, especially for diagnostics. Such efforts have been limited by the difficulty in obtaining sufficient quantities of homogenous glycan samples needed to resolve the exact relationships between glycan structure and their structural or modulatory functions on a given glycoconjugate. Synthetic strategies offer a viable route for overcoming these technical hurdles. In recent years, microfluidics have emerged as powerful tools for realizing high-throughput and reproducible syntheses of homogenous glycans for the potential use in functional studies. This critical review provides readers with an overview of the microfluidic technologies that have been developed for chemical and enzymatic glycan synthesis. The advantages and limitations associated with using microreactor platforms to improve the scalability, productivity, and selectivity of glycosylation reactions will be discussed, as well as suggested future work that can address certain pitfalls.
Collapse
|
19
|
Li M, Li Q, Su Y, Qiao Z, Wang J, Wang P, Ren S, Song N. 4-(tert-Butyldiphenylsilyloxy)-2,2-dimethylbutanoyl: An Easily Removable Pivaloyl-Type Protecting Group with High Orthogonality. SYNTHESIS-STUTTGART 2022. [DOI: 10.1055/a-1751-1225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
AbstractProtecting groups play multiple and vital roles during the synthesis of carbohydrates and other natural products. We herein report the installation and orthogonal cleavage, under mild conditions, of a 4-(tert-butyldiphenylsilyloxy)-2,2-dimethylbutanoyl (BDMB) group as a sterically hindered pivaloyl-type hydroxy protecting group. The compatibility of this substituent with the removal of other protecting groups is also investigated. Due to its advantageous properties, BDMB is anticipated to function as a valuable agent for masking hydroxy groups.
Collapse
Affiliation(s)
- Ming Li
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology
| | - Qishuai Li
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China
| | - Yong Su
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China
| | - Zhi Qiao
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China
| | - Jianjun Wang
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China
| | - Peng Wang
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China
| | - Sumei Ren
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology
| | - Ni Song
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology
| |
Collapse
|
20
|
do Nascimento MA, Vargas JPC, Rodrigues JGA, Leão RAC, de Moura PHB, Leal ICR, Bassut J, de Souza ROMA, Wojcieszak R, Itabaiana I. Lipase-catalyzed acylation of levoglucosan in continuous flow: antibacterial and biosurfactant studies. RSC Adv 2022; 12:3027-3035. [PMID: 35425309 PMCID: PMC8979102 DOI: 10.1039/d1ra08111j] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Accepted: 01/12/2022] [Indexed: 01/07/2023] Open
Abstract
Studies involving the transformation of lignocellulosic biomass into high value-added chemical products have been intensively conducted in recent years. Its matrix is mainly composed of cellulose, hemicellulose and lignin, being, therefore, an abundant and renewable source for obtaining several platform molecules, with levoglucosan (LG) standing out. This anhydrous carbohydrate can be acylated to obtain carbohydrate fatty acid esters (CFAEs). Here, these compounds were obtained via enzymatic acylation of LG, commercially obtained (Start BioScience®), with different acyl donors in continuous flow. Through the experimental design using a model reaction, it was possible to optimize the reaction conditions, temperature and residence time, obtaining a maximum conversion at 61 °C and 77 min. In addition, there was a productivity gain of up to 100 times in all comparisons made with the batch system. Finally, CFAEs were applied in tests of interfacial tension and biological activity. For a mixture of 4- and 2-O-lauryl-1,6-anhydroglucopyranose (MONLAU), the minimum interfacial tension (IFTmin) obtained was 96 mN m−1 and the critical micelle concentration (CMC) was 50 mM. Similar values were obtained for a mixture of 4- and 2-O-palmitoyl-1,6-anhydroglucopyranose (MONPAL), not yet reported in the literature, of 88 mN m−1 in 50 mM. For a mixture of 4- and 2-O-estearyl-1,6-anhydroglucopyranose (MONEST) and 4- and 2-O-oleoyl-1,6-anhydroglucopyranose (MONOLE), CMC was higher than 60 mM and IFTmin of 141 mN m−1 and 102 mN m−1, respectively. Promising data were obtained for minimal inhibitory concentration (MIC) and minimal bactericidal concentration (MBC) of MONLAU against Staphylococcus aureus strains at 0.25 mM. Ipase-catalyzed transesterification of LG under continuous flow conditions.![]()
Collapse
Affiliation(s)
- Marcelo A. do Nascimento
- Biocatalysis and Organic Synthesis Group, Chemistry Institute, Federal University of Rio de Janeiro, CEP 21941-909, Brazil
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181 – UCCS – Unité de Catalyse et Chimiedu Solide, F-59000, Lille, France
| | - Juan P. C. Vargas
- Nanotechnology Engineering Program, COPPE, Universidade Federal do Rio de Janeiro, UFRJ, Rio de Janeiro, Brazil
| | - José G. A. Rodrigues
- Institute of Chemistry, Federal University of Rio de Janeiro, University City, 21941-909, Rio de Janeiro, Brazil
| | - Raquel A. C. Leão
- Biocatalysis and Organic Synthesis Group, Chemistry Institute, Federal University of Rio de Janeiro, CEP 21941-909, Brazil
| | - Patricia H. B. de Moura
- Laboratory of Natural Products and Biological Assays, Department of Natural Products and Food, Pharmacy Faculty, Federal University of Rio de Janeiro, 21941-902, Rio de Janeiro, Brazil
| | - Ivana C. R. Leal
- Laboratory of Natural Products and Biological Assays, Department of Natural Products and Food, Pharmacy Faculty, Federal University of Rio de Janeiro, 21941-902, Rio de Janeiro, Brazil
| | - Jonathan Bassut
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181 – UCCS – Unité de Catalyse et Chimiedu Solide, F-59000, Lille, France
| | - Rodrigo O. M. A. de Souza
- Biocatalysis and Organic Synthesis Group, Chemistry Institute, Federal University of Rio de Janeiro, CEP 21941-909, Brazil
| | - Robert Wojcieszak
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181 – UCCS – Unité de Catalyse et Chimiedu Solide, F-59000, Lille, France
| | - Ivaldo Itabaiana
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181 – UCCS – Unité de Catalyse et Chimiedu Solide, F-59000, Lille, France
- Laboratory of Technological Biochemistry and Biocatalysis, Department of Biochemical Engineering, School of Chemistry, Federal University of Rio de Janeiro, 21941-909, Rio de Janeiro, Brazil
| |
Collapse
|
21
|
Carlier M, Lesur E, Baron A, Lemétais A, Guitot K, Roupnel L, Dietrich C, Doisneau G, Urban D, Bayan N, Beau JM, Guianvarc'h D, Vauzeilles B, Bourdreux Y. Synthesis of chemical tools to label the mycomembrane of corynebacteria using a modified Iron (III) chloride-mediated protection of trehalose. Org Biomol Chem 2022; 20:1974-1981. [DOI: 10.1039/d2ob00107a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Trehalose-based probes are useful tools allowing the detection of the mycomembrane of Mycobacteria through the metabolic labeling approach. Some of them are trehalose analogues conjugated to fluorescent probes and others...
Collapse
|
22
|
Halder T, Yadav S. Total synthesis of the O-antigen repeating unit of Providencia stuartii O49 serotype through linear and one-pot assemblies. Beilstein J Org Chem 2021; 17:2915-2921. [PMID: 34956410 PMCID: PMC8685571 DOI: 10.3762/bjoc.17.199] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Accepted: 11/29/2021] [Indexed: 11/30/2022] Open
Abstract
Capsular polysaccharides of pathogenic bacteria have been reported to be effective vaccines against diseases caused by them. Providencia stuartii is a class of enterobacteria of the family Providencia that is responsible for several antibiotic resistant infections, particularly urinary tract infections of patients with prolonged catheterization in hospital settings. Towards the goal of development of vaccine candidates against this pathogen, we herein report the total synthesis of a trisaccharide repeating unit of the O-antigen polysaccharide of the P. stuartii O49 serotype containing the →6)-β-ᴅ-Galp-(1→3)-β-ᴅ-GalpNAc(1→4)-α-ᴅ-Galp(1→ linkage. The synthesis of the trisaccharide repeating unit was carried out first by a linear strategy involving the [1 + (1 + 1 = 2)] assembly, followed by a one-pot synthesis involving [1 + 1 + 1] strategy from the corresponding monosaccharides. The one-pot method provided a higher yield of the protected trisaccharide intermediate (73%) compared to the two step synthesis (66%). The protected trisaccharide was then deprotected and N-acetylated to finally afford the desired trisaccharide repeating unit as its α-p-methoxyphenyl glycoside.
Collapse
Affiliation(s)
- Tanmoy Halder
- Department of Chemistry, Indian Institute of Technology (ISM), Dhanbad, 826004, Jharkhand, India
| | - Somnath Yadav
- Department of Chemistry, Indian Institute of Technology (ISM), Dhanbad, 826004, Jharkhand, India
| |
Collapse
|
23
|
Weldu WD, Wang CC. Rationalizing the Stereoelectronic Influence of Interglycosidic Bond Conformations on the Reactivity of 1,4- O-Linked Disaccharide Donors. J Org Chem 2021; 86:17906-17917. [PMID: 34818891 DOI: 10.1021/acs.joc.1c02207] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Disaccharide donors are key precursors in convergent glycan synthesis strategies. Unexpectedly, we observed that disaccharide thioglycosyl donors containing 1,4-O-linked α-glycosidic bonds are much more reactive than their β-analogues with the same protecting group pattern. Herein, we rationalized that such a difference in their reactivity is attributed to the conformation of the 1,4-O-interglycosidic bond which is controlled by anomeric and exo-anomeric effects. Moreover, the conformational preferences of these donors are dictated by the dihedral angles ϕ and ψ of their interglycosidic linkages and the torsional angle ω of their side chain along the C5-C6 bond. This fundamental research clarifies how the long-range stereoelectronic effects from the nonreducing end sugar can influence the reactivity of the leaving group at the reducing end and the behavior of disaccharide donors thereof.
Collapse
Affiliation(s)
- Welday Desta Weldu
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan.,Sustainable Chemical Science and Technology (SCST), Taiwan International Graduate Program (TIGP), Academia Sinica, Taipei 115, Taiwan.,Department of Applied Chemistry, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan
| | - Cheng-Chung Wang
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan.,Sustainable Chemical Science and Technology (SCST), Taiwan International Graduate Program (TIGP), Academia Sinica, Taipei 115, Taiwan
| |
Collapse
|
24
|
Wang S, Zhelavskyi O, Lee J, Argüelles AJ, Khomutnyk YY, Mensah E, Guo H, Hourani R, Zimmerman PM, Nagorny P. Studies of Catalyst-Controlled Regioselective Acetalization and Its Application to Single-Pot Synthesis of Differentially Protected Saccharides. J Am Chem Soc 2021; 143:18592-18604. [PMID: 34705439 PMCID: PMC8585716 DOI: 10.1021/jacs.1c08448] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
This article describes studies on the regioselective acetal protection of monosaccharide-based diols using chiral phosphoric acids (CPAs) and their immobilized polymeric variants, (R)-Ad-TRIP-PS and (S)-SPINOL-PS, as the catalysts. These catalyst-controlled regioselective acetalizations were found to proceed with high regioselectivities (up to >25:1 rr) on various d-glucose-, d-galactose-, d-mannose-, and l-fucose-derived 1,2-diols and could be carried out in a regiodivergent fashion depending on the choice of chiral catalyst. The polymeric catalysts were conveniently recycled and reused multiple times for gram-scale functionalizations with catalytic loadings as low as 0.1 mol %, and their performance was often found to be superior to the performance of their monomeric variants. These regioselective CPA-catalyzed acetalizations were successfully combined with common hydroxyl group functionalizations as single-pot telescoped procedures to produce 32 regioisomerically pure differentially protected mono- and disaccharide derivatives. To further demonstrate the utility of the polymeric catalysts, the same batch of (R)-Ad-TRIP-PS catalyst was recycled and reused to accomplish single-pot gram-scale syntheses of 6 differentially protected d-glucose derivatives. The subsequent exploration of the reaction mechanism using NMR studies of deuterated and nondeuterated substrates revealed that low-temperature acetalizations happen via a syn-addition mechanism and that the reaction regioselectivity exhibits strong dependence on the temperature. The computational studies indicate a complex temperature-dependent interplay of two reaction mechanisms, one involving an anomeric phosphate intermediate and another via concerted asynchronous formation of an acetal, that results in syn-addition products. The computational models also explain the steric factors responsible for the observed C2 selectivities and are consistent with experimentally observed selectivity trends.
Collapse
Affiliation(s)
- Sibin Wang
- Chemistry Department, University of Michigan, 930 N. University Avenue, Ann Arbor, MI 48109
| | - Oleksii Zhelavskyi
- Chemistry Department, University of Michigan, 930 N. University Avenue, Ann Arbor, MI 48109
| | - Jeonghyo Lee
- Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, South Korea
| | - Alonso J. Argüelles
- Synthetic Molecule Design and Development, Lilly Research Laboratories, Eli Lilly and Company, 307 E. Merrill St. Indianapolis, IN 46225
| | | | - Enoch Mensah
- Chemistry Department, Indiana University Southeast, 4201 Grant Line Rd. New Albany, IN 47150
| | - Hao Guo
- Deparment of Chemical and Biomolecular Engineering, Lehigh University, Bethlehem, PA 18015
| | - Rami Hourani
- Chemistry Department, Stanford University, 333 Campus Drive, Stanford, CA 94305-5080
| | - Paul M. Zimmerman
- Chemistry Department, University of Michigan, 930 N. University Avenue, Ann Arbor, MI 48109
| | - Pavel Nagorny
- Chemistry Department, University of Michigan, 930 N. University Avenue, Ann Arbor, MI 48109
| |
Collapse
|
25
|
Muru K, Cloutier M, Provost-Savard A, Di Cintio S, Burton O, Cordeil J, Groleau MC, Legault J, Déziel E, Gauthier C. Total Synthesis of a Chimeric Glycolipid Bearing the Partially Acetylated Backbone of Sponge-Derived Agminoside E. J Org Chem 2021; 86:15357-15375. [PMID: 34672576 DOI: 10.1021/acs.joc.1c01907] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We describe the total synthesis of a chimeric glycolipid bearing both the partially acetylated backbone of sponge-derived agminoside E and the (R)-3-hydroxydecanoic acid chain of bacterial rhamnolipids. The branched pentaglucolipid skeleton was achieved using a [3 + 2] disconnection approach. The β-(1 → 2) and β-(1 → 4)-glycosidic bonds were synthesized through a combination of NIS/Yb(OTf)3- and TMSOTf-mediated stereoselective glycosylations of thiotolyl, N-phenyltrifluoroacetimidate, and trichloroacetimidate donors. Late-stage pentaacetylation, Staudinger reduction of a (2-azidomethyl)benzoyl group, followed by continuous-flow microfluidic hydrogenolysis completed the total synthesis of the structurally simplified glycolipid, whose partial acetylation pattern on the glycan part was identical to agminoside E. Our study lays the foundation for the total synthesis of sponge-derived agminosides and the understanding of their biological functions in sponges.
Collapse
Affiliation(s)
- Kevin Muru
- Centre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), 531, boulevard des Prairies, Laval, Québec H7V 1B7, Canada
| | - Maude Cloutier
- Centre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), 531, boulevard des Prairies, Laval, Québec H7V 1B7, Canada
| | - Arianne Provost-Savard
- Centre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), 531, boulevard des Prairies, Laval, Québec H7V 1B7, Canada
| | - Sabrina Di Cintio
- Centre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), 531, boulevard des Prairies, Laval, Québec H7V 1B7, Canada
| | - Océane Burton
- Centre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), 531, boulevard des Prairies, Laval, Québec H7V 1B7, Canada
| | - Justin Cordeil
- Centre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), 531, boulevard des Prairies, Laval, Québec H7V 1B7, Canada
| | - Marie-Christine Groleau
- Centre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), 531, boulevard des Prairies, Laval, Québec H7V 1B7, Canada
| | - Jean Legault
- Département des Sciences Fondamentales, Université du Québec à Chicoutimi (UQAC), 555, boulevard de l'Université, Chicoutimi, Québec G7H 2B1, Canada
| | - Eric Déziel
- Centre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), 531, boulevard des Prairies, Laval, Québec H7V 1B7, Canada
| | - Charles Gauthier
- Centre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique (INRS), 531, boulevard des Prairies, Laval, Québec H7V 1B7, Canada
| |
Collapse
|
26
|
Lluna‐Galán C, Izquierdo‐Aranda L, Adam R, Cabrero‐Antonino JR. Catalytic Reductive Alcohol Etherifications with Carbonyl-Based Compounds or CO 2 and Related Transformations for the Synthesis of Ether Derivatives. CHEMSUSCHEM 2021; 14:3744-3784. [PMID: 34237201 PMCID: PMC8518999 DOI: 10.1002/cssc.202101184] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Revised: 07/07/2021] [Indexed: 05/27/2023]
Abstract
Ether derivatives have myriad applications in several areas of chemical industry and academia. Hence, the development of more effective and sustainable protocols for their production is highly desired. Among the different methodologies reported for ether synthesis, catalytic reductive alcohol etherifications with carbonyl-based moieties (aldehydes/ketones and carboxylic acid derivatives) have emerged in the last years as a potential tool. These processes constitute appealing routes for the selective production of both symmetrical and asymmetrical ethers (including O-heterocycles) with an increased molecular complexity. Likewise, ester-to-ether catalytic reductions and hydrogenative alcohol etherifications with CO2 to dialkoxymethanes and other acetals, albeit in less extent, have undergone important advances, too. In this Review, an update of the recent progresses in the area of catalytic reductive alcohol etherifications using carbonyl-based compounds and CO2 have been described with a special focus on organic synthetic applications and catalyst design. Complementarily, recent progress made in catalytic acetal/ketal-to-ether or ester-to-ether reductions and other related transformations have been also summarized.
Collapse
Affiliation(s)
- Carles Lluna‐Galán
- Instituto de Tecnología QuímicaUniversitat Politécnica de València-Consejo Superior Investigaciones Científicas (UPV-CSIC)Avda. de los Naranjos s/n46022ValenciaSpain
| | - Luis Izquierdo‐Aranda
- Instituto de Tecnología QuímicaUniversitat Politécnica de València-Consejo Superior Investigaciones Científicas (UPV-CSIC)Avda. de los Naranjos s/n46022ValenciaSpain
| | - Rosa Adam
- Instituto de Tecnología QuímicaUniversitat Politécnica de València-Consejo Superior Investigaciones Científicas (UPV-CSIC)Avda. de los Naranjos s/n46022ValenciaSpain
| | - Jose R. Cabrero‐Antonino
- Instituto de Tecnología QuímicaUniversitat Politécnica de València-Consejo Superior Investigaciones Científicas (UPV-CSIC)Avda. de los Naranjos s/n46022ValenciaSpain
| |
Collapse
|
27
|
Mishra VN, Mandal PK. One-pot iterative glycosylations toward a tetrasaccharide related to the O-specific polysaccharide from Escherichia coli O132. J Carbohydr Chem 2021. [DOI: 10.1080/07328303.2021.1928153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Vijay Nath Mishra
- Medicinal and Process Chemistry Division, CSIR-Central Drug Research Institute, Lucknow, India
| | - Pintu Kumar Mandal
- Medicinal and Process Chemistry Division, CSIR-Central Drug Research Institute, Lucknow, India
- Chemical Sciences Division, Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India
| |
Collapse
|
28
|
Vibhute AM, Komura N, Tanaka HN, Imamura A, Ando H. Advanced Chemical Methods for Stereoselective Sialylation and Their Applications in Sialoglycan Syntheses. CHEM REC 2021; 21:3194-3223. [PMID: 34028159 DOI: 10.1002/tcr.202100080] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 04/26/2021] [Accepted: 05/03/2021] [Indexed: 12/18/2022]
Abstract
Sialic acid is an important component of cell surface glycans, which are responsible for many vital body functions and should therefore be thoroughly studied to understand their biological roles and association with disorders. The difficulty of isolating large quantities of homogenous-state sialoglycans from natural sources has inspired the development of the corresponding chemical synthesis methods affording acceptable purities, yields, and amounts. However, the related syntheses are challenging because of the difficulties in α-glycosylation of sialic acid, which arises from its certain structural features such as the absence of a stereodirecting group at the C3 position and presence of carboxyl group at the anomeric position. Moreover, the structural complexities of sialoglycans with diverse numbers and locations of sialic acid on the glycan chains pose additional barriers. Thus, efficient α-stereoselective routes to sialosides remain highly sought after, although various types of sialyl donors/acceptors have been developed for the straightforward synthesis of α-sialosides. Herein, we review the latest progress in the α-stereoselective synthesis of sialosides and their applications in the preparation of gangliosides and other sialoglycans.
Collapse
Affiliation(s)
- Amol M Vibhute
- Institute for Glyco-core Research (iGCORE), Gifu University, 1-1 Yanagido, Gifu-shi, Gifu, 501-1193, Japan
| | - Naoko Komura
- Institute for Glyco-core Research (iGCORE), Gifu University, 1-1 Yanagido, Gifu-shi, Gifu, 501-1193, Japan
| | - Hide-Nori Tanaka
- Institute for Glyco-core Research (iGCORE), Gifu University, 1-1 Yanagido, Gifu-shi, Gifu, 501-1193, Japan
| | - Akihiro Imamura
- Institute for Glyco-core Research (iGCORE), Gifu University, 1-1 Yanagido, Gifu-shi, Gifu, 501-1193, Japan.,Department of Applied Bioorganic Chemistry, Gifu University, 1-1 Yanagido, Gifu-shi, Gifu, 501-1193, Japan
| | - Hiromune Ando
- Institute for Glyco-core Research (iGCORE), Gifu University, 1-1 Yanagido, Gifu-shi, Gifu, 501-1193, Japan
| |
Collapse
|
29
|
Gurbanov R. Synthetic Polysaccharide‐Based Vaccines: Progress and Achievements. POLYSACCHARIDES 2021. [DOI: 10.1002/9781119711414.ch31] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
|
30
|
Weldu WD, Wang CC. Selective Acetylation of Non-anomeric Groups of per- O-Trimethylsilylated Sugars. J Org Chem 2021; 86:5336-5344. [PMID: 33634698 DOI: 10.1021/acs.joc.0c02813] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Selective modification of the hydroxyl groups of sugars has been a long-standing challenge due to their proximate relative reactivity. Herein, we report a TMSOTf-catalyzed selective acetylation of the non-anomeric hydroxyl groups of several per-O-TMS-protected sugar substrates while leaving their anomeric group unaffected. In addition to standing versatile by itself, the anomeric O-TMS group left intact can be functionalized to afford key sugar precursors such as imidate donors, which could otherwise be synthesized via a stepwise anomeric deprotection-functionalization procedure.
Collapse
Affiliation(s)
- Welday Desta Weldu
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan.,Sustainable Chemical Science and Technology (SCST), Taiwan International Graduate Program (TIGP), Academia Sinica, Taipei 115, Taiwan.,Department of Applied Chemistry, National Yang Ming Chiao Tung University, Hsinchu 300, Taiwan
| | - Cheng-Chung Wang
- Institute of Chemistry, Academia Sinica, Taipei 115, Taiwan.,Sustainable Chemical Science and Technology (SCST), Taiwan International Graduate Program (TIGP), Academia Sinica, Taipei 115, Taiwan
| |
Collapse
|
31
|
Seitz A, Wende RC, Roesner E, Niedek D, Topp C, Colgan AC, McGarrigle EM, Schreiner PR. Site-Selective Acylation of Pyranosides with Oligopeptide Catalysts. J Org Chem 2021; 86:3907-3922. [PMID: 33617252 DOI: 10.1021/acs.joc.0c02772] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Herein, we report the oligopeptide-catalyzed site-selective acylation of partially protected monosaccharides. We identified catalysts that invert site-selectivity compared to N-methylimidazole, which was used to determine the intrinsic reactivity, for 4,6-O-protected glucopyranosides (trans-diols) as well as 4,6-O-protected mannopyranosides (cis-diols). The reaction yields up to 81% of the inherently unfavored 2-O-acetylated products with selectivities up to 15:1 using mild reaction conditions. We also determined the influence of protecting groups on the reaction and demonstrate that our protocol is suitable for one-pot reactions with multiple consecutive protection steps.
Collapse
Affiliation(s)
- Alexander Seitz
- Institute of Organic Chemistry, Justus Liebig University, Heinrich-Buff-Ring 17, 35392 Giessen, Germany
| | - Raffael C Wende
- Institute of Organic Chemistry, Justus Liebig University, Heinrich-Buff-Ring 17, 35392 Giessen, Germany
| | - Emily Roesner
- Institute of Organic Chemistry, Justus Liebig University, Heinrich-Buff-Ring 17, 35392 Giessen, Germany
| | - Dominik Niedek
- Institute of Organic Chemistry, Justus Liebig University, Heinrich-Buff-Ring 17, 35392 Giessen, Germany
| | - Christopher Topp
- Institute of Organic Chemistry, Justus Liebig University, Heinrich-Buff-Ring 17, 35392 Giessen, Germany
| | - Avene C Colgan
- Centre for Synthesis & Chemical Biology, UCD School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
| | - Eoghan M McGarrigle
- Centre for Synthesis & Chemical Biology, UCD School of Chemistry, University College Dublin, Belfield, Dublin 4, Ireland
| | - Peter R Schreiner
- Institute of Organic Chemistry, Justus Liebig University, Heinrich-Buff-Ring 17, 35392 Giessen, Germany
| |
Collapse
|
32
|
Hansen T, Ofman TP, Vlaming JGC, Gagarinov IA, van Beek J, Goté TA, Tichem JM, Ruijgrok G, Overkleeft HS, Filippov DV, van der Marel GA, Codée JDC. Reactivity-Stereoselectivity Mapping for the Assembly of Mycobacterium marinum Lipooligosaccharides. Angew Chem Int Ed Engl 2021; 60:937-945. [PMID: 32856761 PMCID: PMC7821131 DOI: 10.1002/anie.202010280] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2020] [Indexed: 01/08/2023]
Abstract
The assembly of complex bacterial glycans presenting rare structural motifs and cis-glycosidic linkages is significantly obstructed by the lack of knowledge of the reactivity of the constituting building blocks and the stereoselectivity of the reactions in which they partake. We here report a strategy to map the reactivity of carbohydrate building blocks and apply it to understand the reactivity of the bacterial sugar, caryophyllose, a rare C12-monosaccharide, containing a characteristic tetrasubstituted stereocenter. We mapped reactivity-stereoselectivity relationships for caryophyllose donor and acceptor glycosides by a systematic series of glycosylations in combination with the detection and characterization of different reactive intermediates using experimental and computational techniques. The insights garnered from these studies enabled the rational design of building blocks with the required properties to assemble mycobacterial lipooligosaccharide fragments of M. marinum.
Collapse
Affiliation(s)
- Thomas Hansen
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| | - Tim P. Ofman
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| | - Joey G. C. Vlaming
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| | - Ivan A. Gagarinov
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| | - Jessey van Beek
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| | - Tessa A. Goté
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| | - Jacoba M. Tichem
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| | - Gijs Ruijgrok
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| | - Herman S. Overkleeft
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| | - Dmitri V. Filippov
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| | | | - Jeroen D. C. Codée
- Leiden UniversityLeiden Institute of ChemistryEinsteinweg 552333 CCLeidenThe Netherlands
| |
Collapse
|
33
|
Li T, Li T, Sun Y, Yang Y, Lv P, Wang F, Lou H, Schmidt RR, Peng P. Regioselective benzoylation of unprotected β-glycopyranosides with benzoyl cyanide and an amine catalyst – application to saponin synthesis. Org Chem Front 2021. [DOI: 10.1039/d0qo01243b] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Regioselective protection of trans-trans triol and tetrol moieties in carbohydrates was achieved with BzCN as the benzoylating agent and amine catalysts. The protocols are useful for the chemical synthesis of oligosaccharides and saponins.
Collapse
Affiliation(s)
- Tianlu Li
- National Glycoengineering Research Center
- Shandong University
- Jinan
- China
- Key Laboratory of Chemical Biology (Ministry of Education)
| | - Tong Li
- National Glycoengineering Research Center
- Shandong University
- Jinan
- China
| | - Yajing Sun
- National Glycoengineering Research Center
- Shandong University
- Jinan
- China
| | - Yue Yang
- National Glycoengineering Research Center
- Shandong University
- Jinan
- China
| | - Panpan Lv
- National Glycoengineering Research Center
- Shandong University
- Jinan
- China
| | - Fengshan Wang
- National Glycoengineering Research Center
- Shandong University
- Jinan
- China
- Key Laboratory of Chemical Biology (Ministry of Education)
| | - Hongxiang Lou
- National Glycoengineering Research Center
- Shandong University
- Jinan
- China
- Key Laboratory of Chemical Biology (Ministry of Education)
| | | | - Peng Peng
- National Glycoengineering Research Center
- Shandong University
- Jinan
- China
- Key Laboratory of Chemical Biology (Ministry of Education)
| |
Collapse
|
34
|
Abstract
The importance of post-translational glycosylation in protein structure and function has gained significant clinical relevance recently. The latest developments in glycobiology, glycochemistry, and glycoproteomics have made the field more manageable and relevant to disease progression and immune-response signaling. Here, we summarize the current progress in glycoscience, including the new methodologies that have led to the introduction of programmable and automatic as well as large-scale enzymatic synthesis, and the development of glycan array, glycosylation probes, and inhibitors of carbohydrate-associated enzymes or receptors. These novel methodologies and tools have facilitated our understanding of the significance of glycosylation and development of carbohydrate-derived medicines that bring the field to the next level of scientific and medical significance.
Collapse
Affiliation(s)
- Sachin S Shivatare
- Department of Chemistry, The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, California 92037, USA
| | - Chi-Huey Wong
- Department of Chemistry, The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, California 92037, USA
- Genomics Research Center, Academia Sinica, Taipei 115, Taiwan
| |
Collapse
|
35
|
Maki Y, Nomura K, Okamoto R, Izumi M, Mizutani Y, Kajihara Y. Acceleration and Deceleration Factors on the Hydrolysis Reaction of 4,6- O-Benzylidene Acetal Group. J Org Chem 2020; 85:15849-15856. [PMID: 32343902 DOI: 10.1021/acs.joc.0c00395] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The benzylidene acetal group is one of the most important protecting groups not only in carbohydrate chemistry but also in general organic chemistry. In the case of 4,6-O-benzylidene glycosides, we previously found that the stereochemistry at 4-position altered the reaction rate constant for hydrolysis of benzylidene acetal group. However, a detail of the acceleration or deceleration factor was still unclear. In this work, the hydrolysis reaction of benzylidene acetal group was analyzed using the Arrhenius and Eyring plot to obtain individual parameters for glucosides (Glc), mannosides (Man), and galactosides (Gal). The Arrhenius and Eyring plot indicated that the pre-exponential factor (A) and ΔS⧧ were critical for the smallest reaction rate constant of Gal among nonacetylated substrates. On the other hand, both Ea/ΔH⧧ and A/ΔS⧧ were influential for the smallest reaction rate constant of Gal among diacetylated substrates. All parameters obtained suggested that the rate constant for hydrolysis reaction was regulated by protonation and hydration steps along with solvation. The obtained parameters support wide use of benzylidene acetal group as orthogonal protection of cis- and trans-fused bicyclic systems through the fast hydrolysis of the trans-fused benzylidene acetal group.
Collapse
Affiliation(s)
- Yuta Maki
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan.,Project Research Center for Fundamental Sciences, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Kota Nomura
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan.,Project Research Center for Fundamental Sciences, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Ryo Okamoto
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan.,Project Research Center for Fundamental Sciences, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Masayuki Izumi
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Yasuhisa Mizutani
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| | - Yasuhiro Kajihara
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan.,Project Research Center for Fundamental Sciences, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan
| |
Collapse
|
36
|
Synthesis, spectroscopic characterization, molecular docking, and ADMET studies of mannopyranoside esters as antimicrobial agents. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128821] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
|
37
|
Ueda Y, Kawabata T. Catalyst-Controlled Site-Selective Acylation and its Application to Unconventional Total Synthesis of Natural Glycosides. J SYN ORG CHEM JPN 2020. [DOI: 10.5059/yukigoseikyokaishi.78.1138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
|
38
|
Malik A, Seeberger PH, Varón Silva D. Advances in the Chemical Synthesis of Carbohydrates and Glycoconjugates. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2020; 175:201-230. [PMID: 33188456 DOI: 10.1007/10_2020_150] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Carbohydrates are functional and structural biomolecules with structures ranging from monosaccharides to polysaccharides. They are naturally found as pure glycans or attached to lipids and proteins forming glycoconjugates. The biosynthesis of carbohydrates is not genetically controlled. The regulation takes place by the expression of enzymes that transfer and hydrolyze the glycan units, leading to glycocojugates having complex mixtures of glycan structures. Chemical synthesis emerged as the best strategy to obtain defined glycan and glycoconjugates and overcome the challenging purification processes. Here, we review the recent advances in the synthesis of oligosaccharides using manual and automated methods. The chapter covers the methods for the preparation of building blocks and control of stereoselectivity and regioselectivity during glycosylations. Finally, it also presents the strategies to obtain natural and non-natural glycoconjugates with lipids and proteins.
Collapse
Affiliation(s)
- Ankita Malik
- Max Planck Institute of Colloids and Interfaces, Biomolecular Systems, Potsdam, Germany.,Department of Chemistry and Biochemistry, Freie Universität Berlin, Berlin, Germany
| | - Peter H Seeberger
- Max Planck Institute of Colloids and Interfaces, Biomolecular Systems, Potsdam, Germany.,Department of Chemistry and Biochemistry, Freie Universität Berlin, Berlin, Germany
| | - Daniel Varón Silva
- Max Planck Institute of Colloids and Interfaces, Biomolecular Systems, Potsdam, Germany. .,Department of Chemistry and Biochemistry, Freie Universität Berlin, Berlin, Germany.
| |
Collapse
|
39
|
Hansen T, Ofman TP, Vlaming JGC, Gagarinov IA, Beek J, Goté TA, Tichem JM, Ruijgrok G, Overkleeft HS, Filippov DV, Marel GA, Codée JDC. Reactivity–Stereoselectivity Mapping for the Assembly of
Mycobacterium marinum
Lipooligosaccharides. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202010280] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Thomas Hansen
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Tim P. Ofman
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Joey G. C. Vlaming
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Ivan A. Gagarinov
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Jessey Beek
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Tessa A. Goté
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Jacoba M. Tichem
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Gijs Ruijgrok
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Herman S. Overkleeft
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Dmitri V. Filippov
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Gijsbert A. Marel
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Jeroen D. C. Codée
- Leiden University Leiden Institute of Chemistry Einsteinweg 55 2333 CC Leiden The Netherlands
| |
Collapse
|
40
|
Farabi K, Manabe Y, Ichikawa H, Miyake S, Tsutsui M, Kabayama K, Yamaji T, Tanaka K, Hung SC, Fukase K. Concise and Reliable Syntheses of Glycodendrimers via Self-Activating Click Chemistry: A Robust Strategy for Mimicking Multivalent Glycan-Pathogen Interactions. J Org Chem 2020; 85:16014-16023. [PMID: 33058668 DOI: 10.1021/acs.joc.0c01547] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Individual interactions between glycans and their receptors are usually weak, although these weak interactions can combine to realize a strong interaction (multivalency). Such multivalency plays a crucial role in the recognition of host cells by pathogens. Glycodendrimers are useful materials for the reconstruction of this multivalent interaction. However, the introduction of a large number of glycans to a dendrimer core is fraught with difficulties. We herein synthesized antipathogenic glycodendrimers using the self-activating click chemistry (SACC) method developed by our group. The excellent reactivity of SACC enabled the efficient preparation of sialyl glycan and Gb3 glycan dendrimers, which exhibited strong avidity toward hemagglutinin on influenza virus and Shiga toxin B subunit produced by Escherichia coli, respectively. We demonstrated the usefulness of SACC-based glycodendrimers as antipathogenic compounds.
Collapse
Affiliation(s)
- Kindi Farabi
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
| | - Yoshiyuki Manabe
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan.,Core for Medicine and Science Collaborative Research and Education, Project Research Center for Fundamental Sciences, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
| | - Hiroaki Ichikawa
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
| | - Shuto Miyake
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
| | - Masato Tsutsui
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
| | - Kazuya Kabayama
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan.,Core for Medicine and Science Collaborative Research and Education, Project Research Center for Fundamental Sciences, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
| | - Toshiyuki Yamaji
- Department of Biochemistry and Cell Biology, National Institute of Infectious Diseases, Toyama 1-23-1, Shinjuku-ku, Tokyo 162-8640, Japan
| | - Katsunori Tanaka
- Biofunctional Synthetic Chemistry Laboratory, RIKEN, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan.,School of Materials and Chemical Technology, Department of Chemical Science and Engineering, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo 152-8552, Japan
| | - Shang-Cheng Hung
- Genomics Research Center, Academia Sinica, 128, Section 2, Academia Road, Taipei 115, Taiwan
| | - Koichi Fukase
- Department of Chemistry, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan.,Core for Medicine and Science Collaborative Research and Education, Project Research Center for Fundamental Sciences, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
| |
Collapse
|
41
|
Chen J, Pantawane AR, Huang P, Liu J, Sankar A, Lin Y, Liu Y, Wu H, Luo S. One‐Pot Protection Strategy of Glucosamine to Assemble Building Blocks of Chitosan and Lipid A. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000923] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Jyun‐Siao Chen
- Department of Chemistry National Chung Hsing University 402 Taichung Taiwan
| | | | - Po‐Hsun Huang
- Department of Chemistry National Chung Hsing University 402 Taichung Taiwan
| | - Jen‐Wei Liu
- Department of Chemistry National Chung Hsing University 402 Taichung Taiwan
| | - Arumugam Sankar
- Department of Chemistry National Chung Hsing University 402 Taichung Taiwan
| | - Yi‐Jyun Lin
- Department of Chemistry National Chung Hsing University 402 Taichung Taiwan
| | - Yu‐Hao Liu
- National Chutung Senior High School 310 Hsinchu Taiwan
| | - Hsin‐Ru Wu
- Instrumentation Center, MOST National Tsing Hua University 300 Hsinchu Taiwan
| | - Shun‐Yuan Luo
- Department of Chemistry National Chung Hsing University 402 Taichung Taiwan
| |
Collapse
|
42
|
Li T, Li T, Linseis M, Wang F, Winter RF, Schmidt RR, Peng P. Catalytic Regioselective Benzoylation of 1,2- trans-Diols in Carbohydrates with Benzoyl Cyanide: The Axial Oxy Group Effect and the Action of Achiral and Chiral Amine Catalysts. ACS Catal 2020. [DOI: 10.1021/acscatal.0c02112] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Tianlu Li
- National Glycoengineering Research Center, Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Jinan City, Shandong 250012, China
- Key Laboratory of Chemical Biology of Ministry of Education, School of Pharmaceutical Sciences, Shandong University, Jinan City, Shandong 250012, China
| | - Tong Li
- National Glycoengineering Research Center, Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Jinan City, Shandong 250012, China
| | - Michael Linseis
- Department of Chemistry, University of Konstanz, Konstanz D-78457, Germany
| | - Fengshan Wang
- National Glycoengineering Research Center, Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Jinan City, Shandong 250012, China
- Key Laboratory of Chemical Biology of Ministry of Education, School of Pharmaceutical Sciences, Shandong University, Jinan City, Shandong 250012, China
| | - Rainer F. Winter
- Department of Chemistry, University of Konstanz, Konstanz D-78457, Germany
| | - Richard R. Schmidt
- Department of Chemistry, University of Konstanz, Konstanz D-78457, Germany
| | - Peng Peng
- National Glycoengineering Research Center, Shandong Provincial Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Jinan City, Shandong 250012, China
- Key Laboratory of Chemical Biology of Ministry of Education, School of Pharmaceutical Sciences, Shandong University, Jinan City, Shandong 250012, China
| |
Collapse
|
43
|
Mukherjee MM, Maity SK, Ghosh R. One-pot construction of carbohydrate scaffolds mediated by metal catalysts. RSC Adv 2020; 10:32450-32475. [PMID: 35516477 PMCID: PMC9056687 DOI: 10.1039/d0ra05355d] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2020] [Accepted: 08/04/2020] [Indexed: 11/21/2022] Open
Abstract
Owing to the environmental concern worldwide and also due to cost, time and labour issues, use of one-pot reactions [domino/cascade/tandem/multi-component (MC) or sequential] has gained much attention among the scientific and industrial communities for the generation of compound libraries having different scaffolds. Inclusion of sugars in such compounds is expected to increase the pharmacological efficacy because of the possibility of better interactions with the receptors of such unnatural glycoconjugates. In many of the one-pot transformations, the presence of a metal salt/complex can improve the reaction/change the course of reaction with remarkable increase in chemo-/regio-/stereo-selectivity. On the other hand because of the importance of natural polymeric glycoconjugates in life processes, the development and efficient synthesis of related oligosaccharides, particularly utilising one-pot MC-glycosylation techniques are necessary. The present review is an endeavour to discuss one-pot transformations involving carbohydrates catalysed by a metal salt/complex.
Collapse
Affiliation(s)
- Mana Mohan Mukherjee
- Laboratory of Cell and Molecular Biology, NIDDK, National Institutes of Health Bethesda MD 20892 USA
| | | | - Rina Ghosh
- Department of Chemistry, Jadavpur University Kolkata 700032 India
| |
Collapse
|
44
|
Xue J, Han Z, Li G, Emmanuel KA, McManus CL, Sui Q, Ge D, Gao Q, Cai L. Synthesis of monophosphorylated lipid A precursors using 2-naphthylmethyl ether as a protecting group. Beilstein J Org Chem 2020; 16:1955-1962. [PMID: 32831952 PMCID: PMC7431767 DOI: 10.3762/bjoc.16.162] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Accepted: 07/28/2020] [Indexed: 12/16/2022] Open
Abstract
Lipid A, the hydrophobic domain of lipopolysaccharide (LPS), is a strong immunostimulator and therefore a valuable target for the development of novel immunomodulators. Various lipid A derivatives have been chemically synthesized in order to reduce toxicity while retaining the immunostimulatory activity. In this work, we describe a novel approach to the frequently problematic synthesis of monophosphorylated mono- and disaccharide lipid X using a combination of established chemistry and a novel 2-naphthylmethyl ether (Nap) protecting group for “permanent” protection of hydroxy groups. Of particular note is the fact that the key Nap protecting group is able to remain in the molecule until the final global deprotection step. Our synthetic strategy is not only efficient in regards to the yield of the various chemical transformations, but also robust in regards to the potential application of this route to the production of other lipid A analogs.
Collapse
Affiliation(s)
- Jundi Xue
- Shanghai University of Engineering Science, 333 Long Teng Road, Shanghai 201620, China
| | - Ziyi Han
- China State Institute of Pharmaceutical Industry, 285 Gebaini Rd, Shanghai 201203, China
| | - Gen Li
- China State Institute of Pharmaceutical Industry, 285 Gebaini Rd, Shanghai 201203, China
| | - Khalisha A Emmanuel
- Department of Chemistry, University of South Carolina Lancaster, 476 Hubbard Drive, Lancaster, South Carolina 29720, USA
| | - Cynthia L McManus
- Department of Chemistry, University of South Carolina Lancaster, 476 Hubbard Drive, Lancaster, South Carolina 29720, USA
| | - Qiang Sui
- Shanghai University of Engineering Science, 333 Long Teng Road, Shanghai 201620, China.,China State Institute of Pharmaceutical Industry, 285 Gebaini Rd, Shanghai 201203, China
| | - Dongmian Ge
- Suzhou Jingye Medicine & Chemical Co., Ltd, 88 Sanlian Street, Suzhou, Jiangsu Province, 215129, China
| | - Qi Gao
- China State Institute of Pharmaceutical Industry, 285 Gebaini Rd, Shanghai 201203, China
| | - Li Cai
- Department of Chemistry, University of South Carolina Lancaster, 476 Hubbard Drive, Lancaster, South Carolina 29720, USA
| |
Collapse
|
45
|
Synthesis of glycoconjugates utilizing the regioselectivity of a lytic polysaccharide monooxygenase. Sci Rep 2020; 10:13197. [PMID: 32764705 PMCID: PMC7411024 DOI: 10.1038/s41598-020-69951-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2020] [Accepted: 07/10/2020] [Indexed: 01/04/2023] Open
Abstract
Polysaccharides from plant biomass are the most abundant renewable chemicals on Earth and can potentially be converted to a wide variety of useful glycoconjugates. Potential applications of glycoconjugates include therapeutics and drug delivery, vaccine development and as fine chemicals. While anomeric hydroxyl groups of carbohydrates are amenable to a variety of useful chemical modifications, selective cross-coupling to non-reducing ends has remained challenging. Several lytic polysaccharide monooxygenases (LPMOs), powerful enzymes known for their application in cellulose degradation, specifically oxidize non-reducing ends, introducing carbonyl groups that can be utilized for chemical coupling. This study provides a simple and highly specific approach to produce oxime-based glycoconjugates from LPMO-functionalized oligosaccharides. The products are evaluated by HPLC, mass spectrometry and NMR. Furthermore, we demonstrate potential biodegradability of these glycoconjugates using selective enzymes.
Collapse
|
46
|
Jin L, Mao X, Wang Z, Mao Y, Mao J, Cui Y. Novel eco-friendly solution for the regioselective acetylation of per-O-TMS carbohydrates. Carbohydr Res 2020; 495:108074. [PMID: 32688017 DOI: 10.1016/j.carres.2020.108074] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Revised: 05/04/2020] [Accepted: 06/09/2020] [Indexed: 11/17/2022]
Abstract
Regioselective acetylation of per-O-TMS carbohydrates was achieved preferentially at the 6 position or 1,6-position under mild conditions involving the eco-friendly solvent acetonitrile, at room temperature, in ambient atmosphere and in a shorter time. Good or moderate yields were obtained via 4-dimethylaminopyridine, without auxiliary equipment. A single α-O-Acetyl acetylation anomer was exclusively defined for the involved substrates. A 6-O-monoacetate derivative was applied and used as a stable glycosyl donor in the disaccharides construction. The methodology was successful for a range of substrates, which include the following: d-lactose, d-trehalose, d-galactose, methyl α-d-galactose, d-glucose, d-mannose, d-xylose, and l-fucose.
Collapse
Affiliation(s)
- Lina Jin
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China
| | - Xianya Mao
- Department of Laboratory Medicine, The Second Affiliated Hospital of Zhejiang University School of Medicine, Hangzhou, 31009, China
| | - Zhikun Wang
- Zhejiang Provincial Key Laboratory of Chemical Utilization of Forestry Biomass, Lin'an, 311300, China
| | - Yangyi Mao
- Hangzhou Yanqing Biotechnology Co., Ltd, Hangzhou, 310052, China
| | - Jianwei Mao
- Zhejiang University of Science and Technology, Hangzhou, 310013, China
| | - Yanli Cui
- Department of Chemistry, Zhejiang University, Hangzhou, 310027, China.
| |
Collapse
|
47
|
Chen CW, Wang CC, Li XR, Witek H, Mong KKT. Sub-stoichiometric reductive etherification of carbohydrate substrates and one-pot protecting group manipulation. Org Biomol Chem 2020; 18:3135-3141. [PMID: 32255139 DOI: 10.1039/d0ob00252f] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
In this study, we report a new reductive etherification procedure for protection of carbohydrate substrates and its application for one-pot preparation of glycosyl building blocks. The reported procedure features the use of polymethylhydrosiloxane (PMHS) as a sub-stoichiometric reducing agent, which prevents the transilylation side reaction and improves the efficiency of the reductive etherification method. Application of the PMHS reductive etherification procedure for one-pot protecting group manipulation are described.
Collapse
Affiliation(s)
- Chiao Wen Chen
- Applied Chemistry Department, National Chiao Tung University, 1001, University Road, Hsinchu City, Taiwan.
| | - Ching Chi Wang
- Applied Chemistry Department, National Chiao Tung University, 1001, University Road, Hsinchu City, Taiwan.
| | - Xin Ru Li
- Applied Chemistry Department, National Chiao Tung University, 1001, University Road, Hsinchu City, Taiwan.
| | - Henryk Witek
- Applied Chemistry Department, National Chiao Tung University, 1001, University Road, Hsinchu City, Taiwan.
| | - Kwok-Kong Tony Mong
- Applied Chemistry Department, National Chiao Tung University, 1001, University Road, Hsinchu City, Taiwan.
| |
Collapse
|
48
|
Zhang Y, Zhang H, Zhao Y, Guo Z, Gao J. Efficient Strategy for α-Selective Glycosidation of d-Glucosamine and Its Application to the Synthesis of a Bacterial Capsular Polysaccharide Repeating Unit Containing Multiple α-Linked GlcNAc Residues. Org Lett 2020; 22:1520-1524. [DOI: 10.1021/acs.orglett.0c00101] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Yanxin Zhang
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao, Shandong 266237, China
| | - Han Zhang
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao, Shandong 266237, China
| | - Ying Zhao
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao, Shandong 266237, China
| | - Zhongwu Guo
- Department of Chemistry, University of Florida, 214 Leigh Hall, Gainesville, Florida 32611, United States
| | - Jian Gao
- National Glycoengineering Research Center, Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, Qingdao, Shandong 266237, China
| |
Collapse
|
49
|
Lv J, Zhu JJ, Liu Y, Dong H. Regioselective Sulfonylation/Acylation of Carbohydrates Catalyzed by FeCl 3 Combined with Benzoyltrifluoroacetone and Its Mechanism Study. J Org Chem 2020; 85:3307-3319. [PMID: 31984732 DOI: 10.1021/acs.joc.9b03128] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
A catalytic amount of FeCl3 combined with benzoyl trifluoroacetone (Hbtfa) (FeCl3/Hbtfa = 1/2) was used to catalyze sulfonylation/acylation of diols and polyols using diisopropylethylamine (DIPEA) or potassium carbonate (K2CO3) as a base. The catalytic system exhibited high catalytic activity, leading to excellent isolated yields of sulfonylation/acylation products with high regioselectivities. Mechanism studies indicated that FeCl3 initially formed [Fe(btfa)3] (btfa = benzoyl trifluoroacetonate) with twice the amount of Hbtfa under basic conditions in the solvent acetonitrile at room temperature. Then, Fe(btfa)3 and two hydroxyl groups of the substrates formed a five- or six-membered ring intermediate in the presence of the base. The subsequent reaction between the cyclic intermediate and a sulfonylation reagent led to the selective sulfonylation of the substrate. All key intermediates were captured in the high-resolution mass spectrometry assay, therefore demonstrating this mechanism for the first time.
Collapse
Affiliation(s)
- Jian Lv
- Key Laboratory of Material Chemistry for Energy Conversion and Storage, Ministry of Education, School of Chemistry & Chemical Engineering, Huazhong University of Science & Technology, Luoyu Road 1037, Wuhan 430074, PR China
| | - Jia-Jia Zhu
- Key Laboratory of Material Chemistry for Energy Conversion and Storage, Ministry of Education, School of Chemistry & Chemical Engineering, Huazhong University of Science & Technology, Luoyu Road 1037, Wuhan 430074, PR China
| | - Yu Liu
- Key Laboratory of Material Chemistry for Energy Conversion and Storage, Ministry of Education, School of Chemistry & Chemical Engineering, Huazhong University of Science & Technology, Luoyu Road 1037, Wuhan 430074, PR China
| | - Hai Dong
- Key Laboratory of Material Chemistry for Energy Conversion and Storage, Ministry of Education, School of Chemistry & Chemical Engineering, Huazhong University of Science & Technology, Luoyu Road 1037, Wuhan 430074, PR China.,Hubei Key Laboratory of Bioinorganic Chemistry and Materia Medica, Huazhong University of Science & Technology, Luoyu Road 1037, Wuhan 430074, PR China
| |
Collapse
|
50
|
Ghotekar BK, Podilapu AR, Kulkarni SS. Total Synthesis of the Lipid-Anchor-Attached Core Trisaccharides of Lipoteichoic Acids of Streptococcus pneumoniae and Streptococcus oralis Uo5. Org Lett 2020; 22:537-541. [PMID: 31887057 DOI: 10.1021/acs.orglett.9b04264] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Herein we report an efficient total synthesis of lipid-anchor-appended core trisaccharides of lipoteichoic acids of Streptococcus pneumoniae and Streptococcus oralis Uo5. The key features include the expedient synthesis of the rare sugar 2,4,6-trideoxy-2-acetamido-4-amino-d-Galp building block via one-pot sequential SN2 reactions and the α-selective coupling of d-thioglucoside with the diacyl glycerol acceptor to construct a common disaccharide acceptor, which was utilized in the total synthesis of target molecules 1 and 2.
Collapse
Affiliation(s)
- Balasaheb K Ghotekar
- Department of Chemistry , Indian Institute of Technology Bombay , Mumbai 400076 , India
| | - Ananda Rao Podilapu
- Department of Chemistry , Indian Institute of Technology Bombay , Mumbai 400076 , India
| | - Suvarn S Kulkarni
- Department of Chemistry , Indian Institute of Technology Bombay , Mumbai 400076 , India
| |
Collapse
|