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Song T, Huang Y, Fang L, Li Y, Li J, Chang J. Non-native species in marine protected areas: Global distribution patterns. ENVIRONMENTAL SCIENCE AND ECOTECHNOLOGY 2024; 22:100453. [PMID: 39175512 PMCID: PMC11338962 DOI: 10.1016/j.ese.2024.100453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Revised: 07/03/2024] [Accepted: 07/05/2024] [Indexed: 08/24/2024]
Abstract
Marine protected areas (MPAs) across various countries have contributed to safeguarding coastal and marine environments. Despite these efforts, marine non-native species (NNS) continue to threaten biodiversity and ecosystems, even within MPAs. Currently, there is a lack of comprehensive studies on the inventories, distribution patterns, and effect factors of NNS within MPAs. Here we show a database containing over 15,000 occurrence records of 2714 marine NNS across 16,401 national or regional MPAs worldwide. To identify the primary mechanisms driving the occurrence of NNS, we utilize model selection with proxies representing colonization pressure, environmental variables, and MPA characteristics. Among the environmental predictors analyzed, sea surface temperature emerged as the sole factor strongly associated with NNS richness. Higher sea surface temperatures are linked to increased NNS richness, aligning with global marine biodiversity trends. Furthermore, human activities help species overcome geographical barriers and migration constraints. Consequently, this influences the distribution patterns of marine introduced species and associated environmental factors. As global climate change continues to alter sea temperatures, it is crucial to protect marine regions that are increasingly vulnerable to intense human activities and biological invasions.
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Affiliation(s)
- Tianjian Song
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
- College of Water Sciences, Beijing Normal University, Beijing, 100875, China
| | - Yuxin Huang
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
- College of Ecology, Lanzhou University, Lanzhou, 730000, China
| | - Lei Fang
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Yonghua Li
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Junsheng Li
- Command Center for Comprehensive Survey of Natural Resources, China Geological Survey Bureau, Beijing, 100055, China
| | - Jiang Chang
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
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2
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Zhong L, Zhu B, Su W, Liang W, Wang H, Li T, Cao D, Ruan T, Chen J, Jiang G. Molecular characterization of diverse quinone analogs for discrimination of aerosol-bound persistent pyrolytic and photolytic radicals. Sci Bull (Beijing) 2024; 69:612-620. [PMID: 38101961 DOI: 10.1016/j.scib.2023.12.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 11/02/2023] [Accepted: 11/24/2023] [Indexed: 12/17/2023]
Abstract
Aerosol-bound organic radicals, including environmentally persistent free radicals (EPFRs), are key components that affect climate, air quality, and human health. While putative structures have been proposed, the molecular characteristics of EPFRs remain unknown. Here, we report a surrogate method to characterize EPFRs in real ambient samples using mass spectrometry. The method identifies chemically relevant oxygenated polycyclic aromatic hydrocarbons (OxPAH) that interconvert with oxygen-centered EPFR (OC-EPFR). We found OxPAH compounds most relevant to OC-EPFRs are structurally rich and diverse quinones, whose diversity is strongly associated with OC-EPFR levels. Both atmospheric oxidation and combustion contributed to OC-EPFR formation. Redundancy analysis and photochemical aging model show pyrolytic sources generated more oxidized OC-EPFRs than photolytic sources. Our study reveals the detailed molecular characteristics of OC-EPFRs and shows that oxidation states can be used to identify the origins of OC-EPFRs, offering a way to track the development and evolution of aerosol particles in the environment.
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Affiliation(s)
- Laijin Zhong
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Bao Zhu
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Wenyuan Su
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Wenqing Liang
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Haotian Wang
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Tingyu Li
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Dong Cao
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Ting Ruan
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.
| | - Jianmin Chen
- Department of Environmental Science and Engineering, Institute of Atmospheric Sciences, Fudan University, Shanghai 200438, China
| | - Guibin Jiang
- State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
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3
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Hosono T, Kitayama T, Saito H, Fujikura K. Development of marine biodiversity database (BISMaL) to enable estimations past habitat conditions for marine life in the northwestern Pacific. Database (Oxford) 2023; 2023:baad081. [PMID: 38506570 PMCID: PMC10952404 DOI: 10.1093/database/baad081] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Revised: 09/29/2023] [Accepted: 10/29/2023] [Indexed: 03/21/2024]
Abstract
Global activities involving the collection of marine biodiversity information have provided a large amount of biological observation records that cover various spatiotemporal areas. To predict biological responses or distribution changes in response to environmental changes by using these observation records, it is essential to analyze not only the current marine physicochemical environmental conditions but also the past conditions when the organisms were observed. We developed a new function to estimate the past marine environmental conditions for the observation records in our marine biodiversity database (Biological Information System for Marine Life: BISMaL) and examine whether the database can reliably estimate thermal habitats for both benthic and planktonic marine organisms. For the benthic squat lobster Shinkaia crosnieri, the estimated and observed in situ temperatures were similar to each other. For the planktonic chaetognaths Krohnitta pacifica and K. subtilis, the estimated temperatures showed clear seasonal changes specific to their distribution areas. These results indicated that BISMaL can reliably provide past habitat conditions regardless of planktonic or benthic lifestyles. BISMaL, which provides both biological observations and estimated past environmental conditions through web services, could lower the barrier to data access and use and make data-driven science available not only for data scientists but also for various marine scientists, such as taxonomists, ecologists and field scientists. Database URL: https://www.godac.jamstec.go.jp/bismal/e/.
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Affiliation(s)
- Takashi Hosono
- Global Oceanographic Data Center, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Showa-machi 3173-25, Kanazawa-ku, Yokohama, Kanagawa 236-0001, Japan
| | - Tomoaki Kitayama
- Global Oceanographic Data Center, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Showa-machi 3173-25, Kanazawa-ku, Yokohama, Kanagawa 236-0001, Japan
| | - Hideaki Saito
- Global Oceanographic Data Center, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Showa-machi 3173-25, Kanazawa-ku, Yokohama, Kanagawa 236-0001, Japan
| | - Katsunori Fujikura
- Marine Biodiversity and Environmental Assessment Research Center, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Natsushima-cho 2-15, Yokosuka, Kanagawa 237-0061, Japan
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4
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Bridges AEH, Barnes DKA, Bell JB, Ross RE, Voges L, Howell KL. Filling the data gaps: Transferring models from data-rich to data-poor deep-sea areas to support spatial management. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 345:118325. [PMID: 37390730 DOI: 10.1016/j.jenvman.2023.118325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 06/02/2023] [Accepted: 06/03/2023] [Indexed: 07/02/2023]
Abstract
Spatial management of the deep sea is challenging due to limited available data on the distribution of species and habitats to support decision making. In the well-studied North Atlantic, predictive models of species distribution and habitat suitability have been used to fill data gaps and support sustainable management. In the South Atlantic and other poorly studied regions, this is not possible due to a massive lack of data. In this study, we investigated whether models constructed in data-rich areas can be used to inform data-poor regions (with otherwise similar environmental conditions). We used a novel model transfer approach to identify to what extent a habitat suitability model for Desmophyllum pertusum reef, built in a data-rich basin (North Atlantic), could be transferred usefully to a data-poor basin (South Atlantic). The transferred model was built using the Maximum Entropy algorithm and constructed with 227 presence and 3064 pseudo-absence points, and 200 m resolution environmental grids. Performance in the transferred region was validated using an independent dataset of D. pertusum presences and absences, with assessments made using both threshold-dependent and -independent metrics. We found that a model for D. pertusum reef fitted to North Atlantic data transferred reasonably well to the South Atlantic basin, with an area under the curve of 0.70. Suitable habitat for D. pertusum reef was predicted on 20 of the assessed 27 features including seamounts. Nationally managed Marine Protected Areas provide significant protection for D. pertusum reef habitat in the region, affording full protection from bottom trawling to 14 of the 20 suitable features. In areas beyond national jurisdiction (ABNJ), we found four seamounts that provided suitable habitat for D. pertusum reef to be at least partially protected from bottom trawling, whilst two did not fall within fisheries closures. There are factors to consider when developing models for transfer including data resolution and predictor type. Nevertheless, the promising results of this application demonstrate that model transfer approaches stand to provide significant contributions to spatial planning processes through provision of new, best available data. This is particularly true for ABNJ and areas that have previously undergone little scientific exploration such as the global south.
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Affiliation(s)
- Amelia E H Bridges
- School of Biological and Marine Sciences, University of Plymouth, Drake Circus, Plymouth, PL4 8AA, UK; British Antarctic Survey, NERC, Cambridge, UK; Centre for Environment, Fisheries and Aquaculture Science (Cefas), Pakefield Road, Lowestoft, UK.
| | | | - James B Bell
- Centre for Environment, Fisheries and Aquaculture Science (Cefas), Pakefield Road, Lowestoft, UK
| | - Rebecca E Ross
- Benthic Communities Research Group, Institute of Marine Research (IMR), Bergen, Norway
| | - Lizette Voges
- South East Atlantic Fisheries Organisation, Swakopmund, Namibia
| | - Kerry L Howell
- School of Biological and Marine Sciences, University of Plymouth, Drake Circus, Plymouth, PL4 8AA, UK
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Kusumoto B, Chao A, Eiserhardt WL, Svenning JC, Shiono T, Kubota Y. Occurrence-based diversity estimation reveals macroecological and conservation knowledge gaps for global woody plants. SCIENCE ADVANCES 2023; 9:eadh9719. [PMID: 37801494 PMCID: PMC10558125 DOI: 10.1126/sciadv.adh9719] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Accepted: 09/06/2023] [Indexed: 10/08/2023]
Abstract
Incomplete sampling of species' geographic distributions has challenged biogeographers for many years to precisely quantify global-scale biodiversity patterns. After correcting for the spatial inequality of sample completeness, we generated a global species diversity map for woody angiosperms (82,974 species, 13,959,780 occurrence records). The standardized diversity estimated more pronounced latitudinal and longitudinal diversity gradients than the raw data and improved the spatial prediction of diversity based on environmental factors. We identified areas with potentially high species richness and rarity that are poorly explored, unprotected, and threatened by increasing human pressure: They are distributed mostly at low latitudes across central South America, Central Africa, subtropical China, and Indomalayan islands. These priority areas for botanical exploration can help to efficiently fill spatial knowledge gaps for better describing the status of biodiversity and improve the effectiveness of the protected area network for global woody plant conservation.
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Affiliation(s)
- Buntarou Kusumoto
- Faculty of Agriculture, Kyushu University, Fukuoka, Japan
- Think Nature Inc., Naha City, Japan
- University Museum, University of the Ryukyus, Nishihara, Japan
- Faculty of Science, University of the Ryukyus, Nishihara, Japan
- Royal Botanic Gardens, Kew, UK
| | - Anne Chao
- National Tsing Hua University, Hsinchu, Taiwan
| | - Wolf L. Eiserhardt
- Royal Botanic Gardens, Kew, UK
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus, Denmark
| | - Jens-Christian Svenning
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus, Denmark
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO) and for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus, Denmark
| | - Takayuki Shiono
- Think Nature Inc., Naha City, Japan
- Faculty of Science, University of the Ryukyus, Nishihara, Japan
| | - Yasuhiro Kubota
- Think Nature Inc., Naha City, Japan
- Faculty of Science, University of the Ryukyus, Nishihara, Japan
- Tropical Biosphere Research Center, University of the Ryukyus, Nishihara, Japan
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6
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Gaurisas DY, Bernardino AF. Benthic biogeographic patterns on the deep Brazilian margin. PeerJ 2023; 11:e14585. [PMID: 36874960 PMCID: PMC9979832 DOI: 10.7717/peerj.14585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Accepted: 11/28/2022] [Indexed: 03/02/2023] Open
Abstract
The Brazilian continental margin (BCM) extends from the Tropical to the Subtropical Atlantic Ocean, with much of its seafloor within deep waters, supporting rich geomorphological features and under wide productivity gradients. Deep-sea biogeographic boundaries on the BCM have been limited to studies that used water mass and salinity properties of deep-water masses, partly as a result of historical under sampling and a lack of consolidation of available biological and ecological datasets. The aim of this study was to consolidate benthic assemblage datasets and test current oceanographic biogeographical deep-sea boundaries (200-5,000 m) using available faunal distributions. We retrieved over 4,000 benthic data records from open-access databases and used cluster analysis to examine assemblage distributions against the deep-sea biogeographical classification scheme from Watling et al. (2013). Starting from the assumption that vertical and horizontal distribution patterns can vary regionally, we test other schemes incorporating latitudinal and water masses stratification within the Brazilian margin. As expected, the classification scheme based on benthic biodiversity is in overall agreement with the general boundaries proposed by Watling et al. (2013). However, our analysis allowed much refinement in the former boundaries, and here we propose the use of two biogeographic realms, two provinces and seven bathyal ecoregions (200-3,500 m), and three abyssal provinces (>3,500 m) along the BCM. The main driver for these units seems to be latitudinal gradients as well as water mass characteristics such as temperature. Our study provides a significant improvement of benthic biogeographic ranges along the Brazilian continental margin allowing a more detailed recognition of its biodiversity and ecological value, and also supports the needed spatial management for industrial activities occurring in its deep waters.
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Affiliation(s)
- Daniela Y. Gaurisas
- Departamento de Oceanografia e Ecologia, Universidade Federal do Espírito Santo, Vitória, Espírito Santo, Brazil
| | - Angelo F. Bernardino
- Departamento de Oceanografia e Ecologia, Universidade Federal do Espírito Santo, Vitória, Espírito Santo, Brazil
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7
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Sobczyk R, Serigstad B, Pabis K. High polychaete diversity in the Gulf of Guinea (West African continental margin): The influence of local and intermediate scale ecological factors on a background of regional patterns. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 859:160046. [PMID: 36356769 DOI: 10.1016/j.scitotenv.2022.160046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 11/03/2022] [Accepted: 11/04/2022] [Indexed: 06/16/2023]
Abstract
The Tropical East Atlantic is one of the least studied areas in the world's oceans, and thus a blank spot on the map of marine studies. Shaped by dynamic currents and shifting water masses, it is a key region in discussions about marine ecology, biodiversity, and zoogeography, while facing numerous, poorly understood, and unmonitored threats associated with climate change, acidification, and pollution. Polychaete diversity was assessed along four transects along the Ghana coast, from shallow to deep bottoms and distributed along the whole upwelling marine ecoregion. Despite high sampling effort, steep species accumulation curves demonstrated the necessity of further sampling in the region. We observed zonation of fauna by depth, and a decrease in species richness from 25 m to 1000 m depth. Polychaete communities were influenced by sediment type, presence of oxygen minimum zones, and local disturbances caused by elevated barium concentrations. Similar evenness along the depth gradient reflected the importance of rare species in the community structure. Differences in phylogenetic diversity, as reflected by taxonomic distinctness, were small, which suggested high ecosystem stability. The highly variable species richness at small scale (meters) showed the importance of ecological factors giving rise to microhabitat diversity, although we also noticed intermediate scale (50-300 km) differences affecting community structure. About 44 % of the species were rare (i.e. recorded only in three or fewer samples), highlighting the level of patchiness, while one fifth was distributed on all transects, therefore along the whole upwelling ecoregion, demonstrating the influence of the regional species pool on local communities at particular stations. Our study yielded 253 species, increasing the number of polychaetes known from this region by at least 50 %. This casts doubt on previous findings regarding Atlantic bioregionalization, biodiversity estimates and endemism, which appear to have been more pronouncedly affected by sampling bias than previously thought.
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Affiliation(s)
- Robert Sobczyk
- Department of Invertebrates Zoology and Hydrobiology, University of Lodz, Lodz, Poland.
| | - Bjorn Serigstad
- Center for Development Cooperation in Fisheries, Institute of Marine Research, Bergen, Norway
| | - Krzysztof Pabis
- Department of Invertebrates Zoology and Hydrobiology, University of Lodz, Lodz, Poland
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Cumming GS, Adamska M, Barnes ML, Barnett J, Bellwood DR, Cinner JE, Cohen PJ, Donelson JM, Fabricius K, Grafton RQ, Grech A, Gurney GG, Hoegh-Guldberg O, Hoey AS, Hoogenboom MO, Lau J, Lovelock CE, Lowe R, Miller DJ, Morrison TH, Mumby PJ, Nakata M, Pandolfi JM, Peterson GD, Pratchett MS, Ravasi T, Riginos C, Rummer JL, Schaffelke B, Wernberg T, Wilson SK. Research priorities for the sustainability of coral-rich western Pacific seascapes. REGIONAL ENVIRONMENTAL CHANGE 2023; 23:66. [PMID: 37125023 PMCID: PMC10119535 DOI: 10.1007/s10113-023-02051-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/13/2022] [Accepted: 02/25/2023] [Indexed: 05/03/2023]
Abstract
Nearly a billion people depend on tropical seascapes. The need to ensure sustainable use of these vital areas is recognised, as one of 17 policy commitments made by world leaders, in Sustainable Development Goal (SDG) 14 ('Life below Water') of the United Nations. SDG 14 seeks to secure marine sustainability by 2030. In a time of increasing social-ecological unpredictability and risk, scientists and policymakers working towards SDG 14 in the Asia-Pacific region need to know: (1) How are seascapes changing? (2) What can global society do about these changes? and (3) How can science and society together achieve sustainable seascape futures? Through a horizon scan, we identified nine emerging research priorities that clarify potential research contributions to marine sustainability in locations with high coral reef abundance. They include research on seascape geological and biological evolution and adaptation; elucidating drivers and mechanisms of change; understanding how seascape functions and services are produced, and how people depend on them; costs, benefits, and trade-offs to people in changing seascapes; improving seascape technologies and practices; learning to govern and manage seascapes for all; sustainable use, justice, and human well-being; bridging communities and epistemologies for innovative, equitable, and scale-crossing solutions; and informing resilient seascape futures through modelling and synthesis. Researchers can contribute to the sustainability of tropical seascapes by co-developing transdisciplinary understandings of people and ecosystems, emphasising the importance of equity and justice, and improving knowledge of key cross-scale and cross-level processes, feedbacks, and thresholds.
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Affiliation(s)
- Graeme S. Cumming
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
| | - Maja Adamska
- Australian Research Council Centre of Excellence for Coral Reef Studies, Australian National University, Canberra, Australia
- Research School of Biology, Australian National University, Canberra, Australia
| | - Michele L. Barnes
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
| | - Jon Barnett
- School of Geography, Earth, and Atmospheric Sciences, University of Melbourne, Melbourne, Australia
| | - David R. Bellwood
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
- College of Science and Engineering, James Cook University, Townsville, Australia
| | - Joshua E. Cinner
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
| | | | - Jennifer M. Donelson
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
| | | | - R. Quentin Grafton
- Crawford School of Public Policy, Australian National University, Canberra, Australia
| | - Alana Grech
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
| | - Georgina G. Gurney
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
| | - Ove Hoegh-Guldberg
- ARC Centre of Excellence for Coral Reef Studies, The University of Queensland, Brisbane, Australia
- School of Biological Sciences, The University of Queensland, Brisbane, Australia
| | - Andrew S. Hoey
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
| | - Mia O. Hoogenboom
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
- College of Science and Engineering, James Cook University, Townsville, Australia
| | - Jacqueline Lau
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
- WorldFish, Penang, Malaysia
| | | | - Ryan Lowe
- Australian Research Council Centre of Excellence for Coral Reef Studies, University of Western Australia, Perth, Australia
- Oceans Institute, University of Western Australia, Perth, Australia
| | - David J. Miller
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
- College of Public Health, Medical & Veterinary Sciences, James Cook University, Townsville, 4811 Australia
| | - Tiffany H. Morrison
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
| | - Peter J. Mumby
- ARC Centre of Excellence for Coral Reef Studies, The University of Queensland, Brisbane, Australia
- School of Biological Sciences, The University of Queensland, Brisbane, Australia
| | - Martin Nakata
- Indigenous Education and Research Centre, James Cook University, Townsville, 4811 Australia
| | - John M. Pandolfi
- ARC Centre of Excellence for Coral Reef Studies, The University of Queensland, Brisbane, Australia
- School of Biological Sciences, The University of Queensland, Brisbane, Australia
| | - Garry D. Peterson
- Stockholm Resilience Centre, Stockholm University, Stockholm, Sweden
| | - Morgan S. Pratchett
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
| | - Timothy Ravasi
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
- Marine Climate Change Unit, Okinawa Institute of Science and Technology (OIST), 1919-1 Tancha, Onna-Son, Okinawa Japan
| | - Cynthia Riginos
- School of Biological Sciences, The University of Queensland, Brisbane, Australia
| | - Jodie L. Rummer
- Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811 Australia
- College of Science and Engineering, James Cook University, Townsville, Australia
| | | | - Thomas Wernberg
- Oceans Institute, University of Western Australia, Perth, Australia
- Institute of Marine Research, Floedevigen Research Station, Nis, Norway
| | - Shaun K. Wilson
- Oceans Institute, University of Western Australia, Perth, Australia
- Western Australia Government Department of Biodiversity, Conservation and Attractions, Perth, Australia
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9
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Vereshchaka A, Anokhina L, Kulagin D, Lunina A. Precision of mesoplankton sampling: A case study based on three net series in the South Atlantic and in the Black Sea. MARINE ENVIRONMENTAL RESEARCH 2023; 183:105848. [PMID: 36521303 DOI: 10.1016/j.marenvres.2022.105848] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2022] [Revised: 12/07/2022] [Accepted: 12/09/2022] [Indexed: 06/17/2023]
Abstract
Mesoplankton is a key element of pelagic communities representing the largest biome on the planet. Many concepts in marine and freshwater biology are based on quantitative estimates of mesoplankton abundance, whereas precision of mesoplankton sampling remains underexplored and may depend on various factors. We analyzed ten contiguous daytime epipelagic samples in the Black Sea and 13 nighttime mesopelagic samples in the South Atlantic. We used a relative error as a measure of the sampling precision and ran a set of Generalized Linear Mixed Models (GLMMs) to estimate effects of six possible factors: abundance, size, diel migration, movement speed, taxonomic group, and net type. Abundance of taxa was the most powerful factor affecting sampling precision (positive effect) followed by the net type (BR provided better precision than Judey net) and taxonomic group. Conversely, size, movement speed, and diel migrations did not significantly influence sampling precision in all sample sets. We conclude that abundance and biomass of dominant species may be estimated with a satisfactory accuracy (relative error <20% of assessed values), which suggests that recent conceptions based on total mesoplankton abundance and biomass (contributed mainly by dominant taxa) are not greatly biased. Quantitative zooplankton structure and biodiversity assessed on the basis of non-transformed matrices are likely more relevant than those based on the root-transformed or presence/absence data.
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Affiliation(s)
| | - Ludmila Anokhina
- Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia
| | - Dmitry Kulagin
- Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia
| | - Anastasiia Lunina
- Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia
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10
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Stępień A, Mühlenhardt-Siegel U, Błażewicz M. Diversity of and biogeographic insights into the Atlantic Eocuma (Cumacea: Peracarida). THE EUROPEAN ZOOLOGICAL JOURNAL 2022. [DOI: 10.1080/24750263.2022.2102680] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022] Open
Affiliation(s)
- A. Stępień
- Department of Invertebrate Zoology and Hydrobiology, Faculty of Biology and Environmental Protection, University of Lodz, Łódź, Poland
| | - U. Mühlenhardt-Siegel
- Universität Hamburg, Leibniz-Institut zur Analyse des Biodiversitätswandels – Standort Hamburg, Hamburg, Germany
| | - M. Błażewicz
- Department of Invertebrate Zoology and Hydrobiology, Faculty of Biology and Environmental Protection, University of Lodz, Łódź, Poland
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11
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Tuya F, Pérez-Neira F, Espino F, Bosch NE, Meyers EK, Jiménez-Alvarado D, Castro JJ, Sobral A, Otero-Ferrer F, Haroun R. Coastal sharks and rays in the Northeastern Atlantic: From an urgent call to collect more data to the declaration of a marine corridor. Glob Ecol Conserv 2022. [DOI: 10.1016/j.gecco.2022.e02261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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12
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Carmezim J, Pennino MG, Martínez-Minaya J, Conesa D, Coll M. A mesoscale analysis of relations between fish species richness and environmental and anthropogenic pressures in the Mediterranean Sea. MARINE ENVIRONMENTAL RESEARCH 2022; 180:105702. [PMID: 35947934 DOI: 10.1016/j.marenvres.2022.105702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 06/09/2022] [Accepted: 07/10/2022] [Indexed: 06/15/2023]
Abstract
Although there is a great knowledge about individual anthropogenic threats to different fish species in the Mediterranean Sea, little is known about how these threats accumulate and interact to affect fish species richness in conjunction with environmental dynamics. This study assesses the role of these threats in the fish richness component and identifies the main areas where the interaction between fish species richness and threats is highest. Our results show that fish richness seems to be higher in saltier and colder areas where the chlorophyll-a and phosphate concentrations are lower. Among the anthropogenic threats analyzed, the costal impact and the fishing effort seems to be the more relevant ones. Overall areas with high fish richness are mainly located along the western and northern shores, with lower values in the south-eastern regions. Areas of potential high cumulative threats are widespread in both the western and eastern basins, with fewer areas located in the south-eastern region. By describing the spatial patterns of the fish richness and which drivers explain these patterns we can also identify which anthropogenic activities can be managed more effectively to maintain and restore marine fish biodiversity in the basin.
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Affiliation(s)
- João Carmezim
- Departamento de Estadística e Investigación Operativa, Universidad de Valencia. C/ Dr, Moliner 50. Burjassot. 46100, Valencia, Spain
| | - Maria Grazia Pennino
- Instituto Español de Oceanografía (IEO, CSIC), Centro Oceanográfico de Vigo, Subida a Radio Faro 50-52, 36390, Vigo, Pontevedra, Spain.
| | - Joaquín Martínez-Minaya
- Departamento de Estadística e Investigación Operativa Aplicadas y Calidad, Universitat Politècnica de València, Valencia, 46022, Spain
| | - David Conesa
- Departamento de Estadística e Investigación Operativa, Universidad de Valencia. C/ Dr, Moliner 50. Burjassot. 46100, Valencia, Spain
| | - Marta Coll
- Institut de Ciències del Mar (ICM-CSIC), P. Marítim de la Barceloneta, 37-49, 08003, Barcelona, Spain; Ecopath International Initiative Research Association, 08172, Barcelona, Spain
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13
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Kopperud BT, Lidgard S, Liow LH. Enhancing georeferenced biodiversity inventories: automated information extraction from literature records reveal the gaps. PeerJ 2022; 10:e13921. [PMID: 35999848 PMCID: PMC9393005 DOI: 10.7717/peerj.13921] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Accepted: 07/29/2022] [Indexed: 01/19/2023] Open
Abstract
We use natural language processing (NLP) to retrieve location data for cheilostome bryozoan species (text-mined occurrences (TMO)) in an automated procedure. We compare these results with data combined from two major public databases (DB): the Ocean Biodiversity Information System (OBIS), and the Global Biodiversity Information Facility (GBIF). Using DB and TMO data separately and in combination, we present latitudinal species richness curves using standard estimators (Chao2 and the Jackknife) and range-through approaches. Our combined DB and TMO species richness curves quantitatively document a bimodal global latitudinal diversity gradient for extant cheilostomes for the first time, with peaks in the temperate zones. A total of 79% of the georeferenced species we retrieved from TMO (N = 1,408) and DB (N = 4,549) are non-overlapping. Despite clear indications that global location data compiled for cheilostomes should be improved with concerted effort, our study supports the view that many marine latitudinal species richness patterns deviate from the canonical latitudinal diversity gradient (LDG). Moreover, combining online biodiversity databases with automated information retrieval from the published literature is a promising avenue for expanding taxon-location datasets.
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Affiliation(s)
- Bjørn Tore Kopperud
- Natural History Museum, University of Oslo, Oslo, Norway,GeoBio-Center, Ludwig-Maximilians-Universität München, München, Germany,Department of Earth and Environmental Sciences, Ludwig-Maximilians-Universität München, München, Germany
| | - Scott Lidgard
- Negaunee Integrative Research Center, Field Museum of Natural History, Chicago, Illinois, U.S.A.
| | - Lee Hsiang Liow
- Natural History Museum, University of Oslo, Oslo, Norway,Centre for Ecological and Evolutionary Synthesis, University of Oslo, Oslo, Norway
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14
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Liu M, Lin M, Li S. Species diversity and spatiotemporal patterns based on cetacean stranding records in China, 1950-2018. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 822:153651. [PMID: 35124055 DOI: 10.1016/j.scitotenv.2022.153651] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Revised: 01/29/2022] [Accepted: 01/30/2022] [Indexed: 06/14/2023]
Abstract
Stranding data can provide conservation-valuable information on cetaceans over long time and large space, representing a low-cost but useful approach to monitor these indicator species and their inhabiting environments. Here, we established a national dataset by collating all available records of cetacean strandings (CSs) along >30,000-km coastline of China over seven decades. Between 1950 and 2018, a total of 1763 CSs were recorded across 36 cetacean species from eight families. Importantly, 30.5% of the recorded species are currently recognized as threatened levels on the IUCN Red List. In quantity, Odontocete species accounted for 89.9% of total CSs. In 1763 CSs, 91.8% were events of single individual. Furthermore, 31.9% and 42.4% were events of alive and dead animals, respectively. The number of CSs increased gradually from 1950 to 2018, and more rapidly between 1990 and 2018. CSs occurred in all months, while a seasonal pattern could be observed with 38.5% reports between March and June. The most commonly recorded species were finless porpoises (Neophocaena spp., n = 492) and Indo-Pacific humpback dolphin (Sousa chinensis, n = 291). The highest number of CSs (n = 478) was documented in Hong Kong, while the greatest species richness (n = 28) and the highest stranding density (24.6 CSs per 100-km coastline) were observed in Taiwan. Several CS hotspots were identified in the southern and eastern China, while hotspots differed among taxonomic categories. To conclude, these findings provided a comprehensive understanding of cetacean communities in the coastal waters of China, which are beneficial for improving further research, conservation, and management on cetaceans.
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Affiliation(s)
- Mingming Liu
- Marine Mammal and Marine Bioacoustics Laboratory, Institute of Deep-sea Science and Engineering, Chinese Academy of Science, Sanya 572000, China
| | - Mingli Lin
- Marine Mammal and Marine Bioacoustics Laboratory, Institute of Deep-sea Science and Engineering, Chinese Academy of Science, Sanya 572000, China
| | - Songhai Li
- Marine Mammal and Marine Bioacoustics Laboratory, Institute of Deep-sea Science and Engineering, Chinese Academy of Science, Sanya 572000, China; Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao 266071, China.
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15
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Haas B, Mackay M, Novaglio C, Fullbrook L, Murunga M, Sbrocchi C, McDonald J, McCormack PC, Alexander K, Fudge M, Goldsworthy L, Boschetti F, Dutton I, Dutra L, McGee J, Rousseau Y, Spain E, Stephenson R, Vince J, Wilcox C, Haward M. The future of ocean governance. REVIEWS IN FISH BIOLOGY AND FISHERIES 2022. [PMID: 33456210 DOI: 10.22541/au.160193487.70124607/v1] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
UNLABELLED Ocean governance is complex and influenced by multiple drivers and actors with different worldviews and goals. While governance encompasses many elements, in this paper we focus on the processes that operate within and between states, civil society and local communities, and the market, including industry. Specifically, in this paper, we address the question of how to move towards more sustainable ocean governance aligning with the sustainable development goals (SDGs) and the UN Ocean Decade. We address three major risks to oceans that arise from governance-related issues: (1) the impacts of the overexploitation of marine resources; (2) inequitable distribution of access to and benefits from marine ecosystem services, and (3) inadequate or inappropriate adaptation to changing ocean conditions. The SDGs have been used as an underlying framework to develop these risks. We identify five drivers that may determine how ocean governance evolves, namely formal rules and institutions, evidence and knowledge-based decision-making, legitimacy of decision-making institutions, stakeholder engagement and participation, and empowering communities. These drivers were used to define two alternative futures by 2030: (a) 'Business as Usual'-a continuation of current trajectories and (b) 'More Sustainable Future'-optimistic, transformational, but technically achievable. We then identify what actions, as structured processes, can reduce the three major governance-related risks and lead to the More Sustainable Future. These actions relate to the process of co-creation and implementation of improved, comprehensive, and integrated management plans, enhancement of decision-making processes, and better anticipation and consideration of ambiguity and uncertainty. SUPPLEMENTARY INFORMATION The online version of this article (10.1007/s11160-020-09631-x) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Bianca Haas
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Mary Mackay
- CSIRO, Oceans and Atmosphere, Castray Esplanade, Battery Point, TAS 7004 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Camilla Novaglio
- CSIRO, Oceans and Atmosphere, Castray Esplanade, Battery Point, TAS 7004 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Liam Fullbrook
- School of Social Sciences, College of Arts, Law and Education, University of Tasmania, Private Bag 22, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Michael Murunga
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Carla Sbrocchi
- Faculty of Arts and Social Sciences, University of Technology Sydney, PO Box 123, Broadway, 2007 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Jan McDonald
- Faculty of Law, University of Tasmania, Private Bag 89, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Phillipa C McCormack
- Faculty of Law, University of Tasmania, Private Bag 89, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Karen Alexander
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Maree Fudge
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Lyn Goldsworthy
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Fabio Boschetti
- CSIRO Oceans and Atmosphere, Crawley, WA Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Ian Dutton
- Department of Primary Industries Parks, Water and Environment, GPO Box 44, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Leo Dutra
- CSIRO Oceans and Atmosphere, St Lucia 4067, Brisbane, QLD Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Jeffrey McGee
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Faculty of Law, University of Tasmania, Private Bag 89, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Yannick Rousseau
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Erica Spain
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
| | - Robert Stephenson
- CSIRO, Oceans and Atmosphere, Castray Esplanade, Battery Point, TAS 7004 Australia
- Fisheries and Oceans Canada, Ottawa, Canada
- University of New Brunswick, Fredericton, Canada
- St. Andrews Biological Station, St. Andrews, NB Canada
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Joanna Vince
- School of Social Sciences, College of Arts, Law and Education, University of Tasmania, Private Bag 22, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Chris Wilcox
- CSIRO, Oceans and Atmosphere, Castray Esplanade, Battery Point, TAS 7004 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Marcus Haward
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
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16
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Roberson LA, Beyer HL, O'Hara C, Watson JEM, Dunn DC, Halpern BS, Klein CJ, Frazier MR, Kuempel CD, Williams B, Grantham HS, Montgomery JC, Kark S, Runting RK. Multinational coordination required for conservation of over 90% of marine species. GLOBAL CHANGE BIOLOGY 2021; 27:6206-6216. [PMID: 34488246 DOI: 10.1111/gcb.15844] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2020] [Accepted: 08/05/2021] [Indexed: 06/13/2023]
Abstract
Marine species are declining at an unprecedented rate, catalyzing many nations to adopt conservation and management targets within their jurisdictions. However, marine species and the biophysical processes that sustain them are naive to international borders. An understanding of the prevalence of cross-border species distributions is important for informing high-level conservation strategies, such as bilateral or regional agreements. Here, we examined 28,252 distribution maps to determine the number and locations of transboundary marine plants and animals. More than 90% of species have ranges spanning at least two jurisdictions, with 58% covering more than 10 jurisdictions. All jurisdictions have at least one transboundary species, with the highest concentrations of transboundary species in the USA, Australia, Indonesia, and the Areas Beyond National Jurisdiction. Distributions of mapped biodiversity indicate that overcoming the challenges of multinational governance is critical for a much wider suite of species than migratory megavertebrates and commercially exploited fish stocks-the groups that have received the vast majority of multinational management attention. To effectively protect marine biodiversity, international governance mechanisms (particularly those related to the Convention on Biological Diversity, the Convention on Migratory Species, and Regional Seas Organizations) must be expanded to promote multinational conservation planning, and complimented by a holistic governance framework for biodiversity beyond national jurisdiction.
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Affiliation(s)
- Leslie A Roberson
- School of Earth and Environmental Sciences, The University of Queensland, St Lucia, Queensland, Australia
- Centre for Conservation and Biodiversity Science, The University of Queensland, St Lucia, Queensland, Australia
| | - Hawthorne L Beyer
- Centre for Conservation and Biodiversity Science, The University of Queensland, St Lucia, Queensland, Australia
| | - Casey O'Hara
- National Center for Ecological Analysis and Synthesis, Santa Barbara, California, USA
- Bren School of Environmental Science and Management, University of California, Santa Barbara, California, USA
| | - James E M Watson
- Centre for Conservation and Biodiversity Science, The University of Queensland, St Lucia, Queensland, Australia
| | - Daniel C Dunn
- Centre for Conservation and Biodiversity Science, The University of Queensland, St Lucia, Queensland, Australia
- School of Biological Sciences, The University of Queensland, St Lucia, Queensland, Australia
| | - Benjamin S Halpern
- National Center for Ecological Analysis and Synthesis, Santa Barbara, California, USA
- Bren School of Environmental Science and Management, University of California, Santa Barbara, California, USA
| | - Carissa J Klein
- School of Earth and Environmental Sciences, The University of Queensland, St Lucia, Queensland, Australia
- Centre for Conservation and Biodiversity Science, The University of Queensland, St Lucia, Queensland, Australia
| | - Melanie R Frazier
- National Center for Ecological Analysis and Synthesis, Santa Barbara, California, USA
| | - Caitlin D Kuempel
- School of Earth and Environmental Sciences, The University of Queensland, St Lucia, Queensland, Australia
- Centre for Conservation and Biodiversity Science, The University of Queensland, St Lucia, Queensland, Australia
- National Center for Ecological Analysis and Synthesis, Santa Barbara, California, USA
- Australian Research Council Centre of Excellence for Coral Reef Studies, University of Queensland, St Lucia, Queensland, Australia
| | - Brooke Williams
- School of Earth and Environmental Sciences, The University of Queensland, St Lucia, Queensland, Australia
- Centre for Conservation and Biodiversity Science, The University of Queensland, St Lucia, Queensland, Australia
| | - Hedley S Grantham
- Wildlife Conservation Society, Global Conservation Program, Bronx, New York, USA
| | - Jamie C Montgomery
- National Center for Ecological Analysis and Synthesis, Santa Barbara, California, USA
| | - Salit Kark
- Centre for Conservation and Biodiversity Science, The University of Queensland, St Lucia, Queensland, Australia
- School of Biological Sciences, The University of Queensland, St Lucia, Queensland, Australia
| | - Rebecca K Runting
- School of Geography, University of Melbourne, Parkville, Victoria, Australia
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17
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Stauffer S, Jucker M, Keggin T, Marques V, Andrello M, Bessudo S, Cheutin M, Borrero‐Pérez GH, Richards E, Dejean T, Hocdé R, Juhel J, Ladino F, Letessier TB, Loiseau N, Maire E, Mouillot D, Mutis Martinezguerra M, Manel S, Polanco Fernández A, Valentini A, Velez L, Albouy C, Pellissier L, Waldock C. How many replicates to accurately estimate fish biodiversity using environmental DNA on coral reefs? Ecol Evol 2021; 11:14630-14643. [PMID: 34765130 PMCID: PMC8571620 DOI: 10.1002/ece3.8150] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 08/31/2021] [Accepted: 09/08/2021] [Indexed: 01/22/2023] Open
Abstract
Quantifying fish species diversity in rich tropical marine environments remains challenging. Environmental DNA (eDNA) metabarcoding is a promising tool to face this challenge through the filtering, amplification, and sequencing of DNA traces from water samples. However, because eDNA concentration is low in marine environments, the reliability of eDNA to detect species diversity can be limited. Using an eDNA metabarcoding approach to identify fish Molecular Taxonomic Units (MOTUs) with a single 12S marker, we aimed to assess how the number of sampling replicates and filtered water volume affect biodiversity estimates. We used a paired sampling design of 30 L per replicate on 68 reef transects from 8 sites in 3 tropical regions. We quantified local and regional sampling variability by comparing MOTU richness, compositional turnover, and compositional nestedness. We found strong turnover of MOTUs between replicated pairs of samples undertaken in the same location, time, and conditions. Paired samples contained non-overlapping assemblages rather than subsets of one another. As a result, non-saturated localized diversity accumulation curves suggest that even 6 replicates (180 L) in the same location can underestimate local diversity (for an area <1 km). However, sampling regional diversity using ~25 replicates in variable locations (often covering 10 s of km) often saturated biodiversity accumulation curves. Our results demonstrate variability of diversity estimates possibly arising from heterogeneous distribution of eDNA in seawater, highly skewed frequencies of eDNA traces per MOTU, in addition to variability in eDNA processing. This high compositional variability has consequences for using eDNA to monitor temporal and spatial biodiversity changes in local assemblages. Avoiding false-negative detections in future biomonitoring efforts requires increasing replicates or sampled water volume to better inform management of marine biodiversity using eDNA.
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Affiliation(s)
- Salomé Stauffer
- Landscape EcologyInstitute of Terrestrial EcosystemsDepartment of Environmental Systems ScienceETH ZürichZürichSwitzerland
| | - Meret Jucker
- Landscape EcologyInstitute of Terrestrial EcosystemsDepartment of Environmental Systems ScienceETH ZürichZürichSwitzerland
| | - Thomas Keggin
- Landscape EcologyInstitute of Terrestrial EcosystemsDepartment of Environmental Systems ScienceETH ZürichZürichSwitzerland
- Unit of Land Change ScienceSwiss Federal Research Institute WSLBirmensdorfSwitzerland
| | - Virginie Marques
- MARBECUniv. MontpellierCNRSIFREMERIRDMontpellierFrance
- CEFEUniv. MontpellierCNRSEPHE‐PSL UniversityIRDUniv. Paul Valéry Montpellier 3MontpellierFrance
| | - Marco Andrello
- Institute for the Study of Anthropic Impacts and Sustainability in the Marine EnvironmentNational Research CouncilRomeItaly
| | - Sandra Bessudo
- Fundación Malpelo y otros ecosistemas marinosBogotáColombia
| | | | - Giomar Helena Borrero‐Pérez
- Instituto de Investigaciones Marinas y Costeras‐INVEMAR Museo de Historia Natural Marina de Colombia (MHNMC)Santa MartaColombia
| | - Eilísh Richards
- Landscape EcologyInstitute of Terrestrial EcosystemsDepartment of Environmental Systems ScienceETH ZürichZürichSwitzerland
| | | | - Régis Hocdé
- MARBECUniv. MontpellierCNRSIFREMERIRDMontpellierFrance
| | | | - Felipe Ladino
- Fundación Malpelo y otros ecosistemas marinosBogotáColombia
| | - Tom B. Letessier
- Institute of ZoologyZoological Society of LondonLondonUK
- Marine Futures LabUniversity of Western AustraliaCrawleyWAAustralia
| | | | - Eva Maire
- Lancaster Environment CentreLancaster UniversityLancasterUK
| | | | - Maria Mutis Martinezguerra
- Instituto de Investigaciones Marinas y Costeras‐INVEMAR Museo de Historia Natural Marina de Colombia (MHNMC)Santa MartaColombia
| | - Stéphanie Manel
- CEFEUniv. MontpellierCNRSEPHE‐PSL UniversityIRDUniv. Paul Valéry Montpellier 3MontpellierFrance
| | - Andrea Polanco Fernández
- Instituto de Investigaciones Marinas y Costeras‐INVEMAR Museo de Historia Natural Marina de Colombia (MHNMC)Santa MartaColombia
| | | | - Laure Velez
- MARBECUniv. MontpellierCNRSIFREMERIRDMontpellierFrance
| | - Camille Albouy
- IFREMERunité Écologie et Modèles pour l’HalieutiqueNantesFrance
| | - Loïc Pellissier
- Landscape EcologyInstitute of Terrestrial EcosystemsDepartment of Environmental Systems ScienceETH ZürichZürichSwitzerland
- Unit of Land Change ScienceSwiss Federal Research Institute WSLBirmensdorfSwitzerland
| | - Conor Waldock
- Landscape EcologyInstitute of Terrestrial EcosystemsDepartment of Environmental Systems ScienceETH ZürichZürichSwitzerland
- Unit of Land Change ScienceSwiss Federal Research Institute WSLBirmensdorfSwitzerland
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18
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Moreno RA, Labra FA, Cotoras DD, Camus PA, Gutiérrez D, Aguirre L, Rozbaczylo N, Poulin E, Lagos NA, Zamorano D, Rivadeneira MM. Evolutionary drivers of the hump-shaped latitudinal gradient of benthic polychaete species richness along the Southeastern Pacific coast. PeerJ 2021; 9:e12010. [PMID: 34692242 PMCID: PMC8483006 DOI: 10.7717/peerj.12010] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2020] [Accepted: 07/28/2021] [Indexed: 11/20/2022] Open
Abstract
Latitudinal diversity gradients (LDG) and their explanatory factors are among the most challenging topics in macroecology and biogeography. Despite of its apparent generality, a growing body of evidence shows that 'anomalous' LDG (i.e., inverse or hump-shaped trends) are common among marine organisms along the Southeastern Pacific (SEP) coast. Here, we evaluate the shape of the LDG of marine benthic polychaetes and its underlying causes using a dataset of 643 species inhabiting the continental shelf (<200 m depth), using latitudinal bands with a spatial resolution of 0.5°, along the SEP (3-56° S). The explanatory value of six oceanographic (Sea Surface Temperature (SST), SST range, salinity, salinity range, primary productivity and shelf area), and one macroecological proxy (median latitudinal range of species) were assessed using a random forest model. The taxonomic structure was used to estimate the degree of niche conservatism of predictor variables and to estimate latitudinal trends in phylogenetic diversity, based on three indices (phylogenetic richness (PDSES), mean pairwise distance (MPDSES), and variation of pairwise distances (VPD)). The LDG exhibits a hump-shaped trend, with a maximum peak of species richness at ca. 42° S, declining towards northern and southern areas of SEP. The latitudinal pattern was also evident in local samples controlled by sampling effort. The random forest model had a high accuracy (pseudo-r2 = 0.95) and showed that the LDG could be explained by four variables (median latitudinal range, SST, salinity, and SST range), yet the functional relationship between species richness and these predictors was variable. A significant degree of phylogenetic conservatism was detected for the median latitudinal range and SST. PDSES increased toward the southern region, whereas VPD showed the opposite trend, both statistically significant. MPDSES has the same trend as PDSES, but it is not significant. Our results reinforce the idea that the south Chile fjord area, particularly the Chiloé region, was likely the evolutionary source of new species of marine polychaetes along SEP, creating a hotspot of diversity. Therefore, in the same way as the canonical LDG shows a decline in diversity while moving away from the tropics; on this case the decline occurs while moving away from Chiloé Island. These results, coupled with a strong phylogenetic signal of the main predictor variables suggest that processes operating mainly at evolutionary timescales govern the LDG.
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Affiliation(s)
- Rodrigo A Moreno
- Facultad de Ciencias, Universidad Santo Tomás, Santiago, Chile.,Centro de Investigación e Innovación para el Cambio Climático (CiiCC), Universidad Santo Tomás, Santiago, Chile
| | - Fabio A Labra
- Facultad de Ciencias, Universidad Santo Tomás, Santiago, Chile.,Centro de Investigación e Innovación para el Cambio Climático (CiiCC), Universidad Santo Tomás, Santiago, Chile
| | - Darko D Cotoras
- Entomology Department, California Academy of Sciences, San Francisco, California, United States
| | - Patricio A Camus
- Departamento de Ecología, Facultad de Ciencias, Universidad Católica de la Santísima Concepción, Concepción, Chile.,Centro de Investigación en Biodiversidad y Ambientes Sustentables (CIBAS), Universidad Católica de la Santísima Concepción, Concepción, Chile
| | - Dimitri Gutiérrez
- Dirección de Investigaciones Oceanográficas y de Cambio Climático, Instituto del Mar del Perú (IMARPE), Callao, Perú
| | - Luis Aguirre
- Laboratorio de Biología y Sistemática de Invertebrados Marinos (LaBSIM), Facultad de Ciencias Biológicas, Universidad Nacional Mayor de San Marcos, Lima, Perú
| | - Nicolás Rozbaczylo
- FAUNAMAR Ltda. Consultorías Medio Ambientales e Investigación Marina, Santiago, Chile
| | - Elie Poulin
- Instituto Milenio de Ecología y Biodiversidad (IEB), Facultad de Ciencias, Universidad de Chile, Santiago, Chile
| | - Nelson A Lagos
- Facultad de Ciencias, Universidad Santo Tomás, Santiago, Chile.,Centro de Investigación e Innovación para el Cambio Climático (CiiCC), Universidad Santo Tomás, Santiago, Chile
| | - Daniel Zamorano
- Centro de Investigación e Innovación para el Cambio Climático (CiiCC), Universidad Santo Tomás, Santiago, Chile.,Department of Zoology, University of Otago, Dunedin, New Zealand
| | - Marcelo M Rivadeneira
- Laboratorio de Paleobiología, Centro de Estudios Avanzados en Zonas Aridas (CEAZA), Coquimbo, Chile.,Departamento de Biología Marina, Facultad de Ciencias del Mar, Universidad Católica del Norte, Coquimbo, Chile.,Departamento de Biología, Universidad de La Serena, La Serena, Chile
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19
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Sobczyk R, Czortek P, Serigstad B, Pabis K. Modelling of polychaete functional diversity: Large marine ecosystem response to multiple natural factors and human impacts on the West African continental margin. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 792:148075. [PMID: 34465033 DOI: 10.1016/j.scitotenv.2021.148075] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 04/16/2021] [Accepted: 05/22/2021] [Indexed: 06/13/2023]
Abstract
Polychaetes are one of the most diverse groups of marine organisms, characterized by high species richness, diversity of feeding guilds, life styles, and mobility types. Marine annelids are useful indicators of ecosystem responses to changes in environmental conditions. The aim of our study was to assess the influence of natural and anthropogenic factors on functional diversity of polychaete communities in the Gulf of Guinea, a large marine ecosystem (LME) located in West Africa. This area can be considered as a model marine ecosystem affected by various human influences, such as pollution associated with the oil industry. Material was collected in 2012 across the coast of Ghana. Samples were gathered along four transects, each with six sampling stations (25-1000 m depth range). Analyses of functional richness and evenness, based on generalized linear mixed-effect models and hierarchical partitioning, allowed for complex assessments of the interactions between polychaete communities and environmental factors (e.g., sediments, total organic matter, salinity, fluorescence, oxygen, concentration of toxic metals, total hydrocarbons). Overall species richness of polychaetes was outstandingly high, with 253 species recorded. Functional richness decreased along a depth gradient, while functional evenness increased with depth, and was positively correlated with Ba content, which reached the highest values in the upper bathyal. Gravel content was an important factor in shaping functional composition of shallow water communities. High values of functional richness observed in the shallows may be an expression of high stability of this ecosystem, at the same time indicating its high resilience. Elevated concentrations of lead also influenced community structure at a local scale. Our study demonstrated how a complex set of factors operating along a depth gradient can influence the functional composition of communities. These results are crucial for future management of industrial and environmental protection activities in this region.
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Affiliation(s)
- Robert Sobczyk
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, Banacha 12/16, 90-237 Lodz, Poland.
| | - Patryk Czortek
- Institute of Botany - Bialowieza Geobotanical Station, University of Warsaw, Sportowa 19, 17-230 Bialowieza, Poland
| | | | - Krzysztof Pabis
- Department of Invertebrate Zoology and Hydrobiology, University of Lodz, Banacha 12/16, 90-237 Lodz, Poland
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20
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Benedetti F, Vogt M, Elizondo UH, Righetti D, Zimmermann NE, Gruber N. Major restructuring of marine plankton assemblages under global warming. Nat Commun 2021; 12:5226. [PMID: 34471105 PMCID: PMC8410869 DOI: 10.1038/s41467-021-25385-x] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2020] [Accepted: 08/02/2021] [Indexed: 11/20/2022] Open
Abstract
Marine phytoplankton and zooplankton form the basis of the ocean’s food-web, yet the impacts of climate change on their biodiversity are poorly understood. Here, we use an ensemble of species distribution models for a total of 336 phytoplankton and 524 zooplankton species to determine their present and future habitat suitability patterns. For the end of this century, under a high emission scenario, we find an overall increase in plankton species richness driven by ocean warming, and a poleward shift of the species’ distributions at a median speed of 35 km/decade. Phytoplankton species richness is projected to increase by more than 16% over most regions except for the Arctic Ocean. In contrast, zooplankton richness is projected to slightly decline in the tropics, but to increase strongly in temperate to subpolar latitudes. In these latitudes, nearly 40% of the phytoplankton and zooplankton assemblages are replaced by poleward shifting species. This implies that climate change threatens the contribution of plankton communities to plankton-mediated ecosystem services such as biological carbon sequestration. Warming will affect marine plankton biomass, but also its diversity and community composition in poorly understood ways. Here, the authors model the spatial distribution of 860 marine plankton species from 10 functional groups and identify the future hotspots of climate change impacts under RCP8.5.
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Affiliation(s)
- Fabio Benedetti
- Environmental Physics, Institute of Biogeochemistry and Pollutant Dynamics, ETH Zürich, Zürich, Switzerland.
| | - Meike Vogt
- Environmental Physics, Institute of Biogeochemistry and Pollutant Dynamics, ETH Zürich, Zürich, Switzerland
| | - Urs Hofmann Elizondo
- Environmental Physics, Institute of Biogeochemistry and Pollutant Dynamics, ETH Zürich, Zürich, Switzerland
| | - Damiano Righetti
- Environmental Physics, Institute of Biogeochemistry and Pollutant Dynamics, ETH Zürich, Zürich, Switzerland
| | - Niklaus E Zimmermann
- Dynamic Macroecology, Swiss Federal Research Institute WSL, Birmensdorf, Switzerland.,Department of Environmental Systems Science, ETH Zurich, Zürich, Switzerland
| | - Nicolas Gruber
- Environmental Physics, Institute of Biogeochemistry and Pollutant Dynamics, ETH Zürich, Zürich, Switzerland
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21
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Almeida TC, Tessarolo G, Nabout JC, Teresa FB. Non‐stationary drivers on fish sampling efforts in Brazilian freshwaters. DIVERS DISTRIB 2021. [DOI: 10.1111/ddi.13269] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023] Open
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22
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Global warming is causing a more pronounced dip in marine species richness around the equator. Proc Natl Acad Sci U S A 2021; 118:2015094118. [PMID: 33876750 DOI: 10.1073/pnas.2015094118] [Citation(s) in RCA: 68] [Impact Index Per Article: 22.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023] Open
Abstract
The latitudinal gradient in species richness, with more species in the tropics and richness declining with latitude, is widely known and has been assumed to be stable over recent centuries. We analyzed data on 48,661 marine animal species since 1955, accounting for sampling variation, to assess whether the global latitudinal gradient in species richness is being impacted by climate change. We confirm recent studies that show a slight dip in species richness at the equator. Moreover, richness across latitudinal bands was sensitive to temperature, reaching a plateau or declining above a mean annual sea surface temperature of 20 °C for most taxa. In response, since the 1970s, species richness has declined at the equator relative to an increase at midlatitudes and has shifted north in the northern hemisphere, particularly among pelagic species. This pattern is consistent with the hypothesis that climate change is impacting the latitudinal gradient in marine biodiversity at a global scale. The intensification of the dip in species richness at the equator, especially for pelagic species, suggests that it is already too warm there for some species to survive.
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23
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Thyrring J, Peck LS. Global gradients in intertidal species richness and functional groups. eLife 2021; 10:64541. [PMID: 33739285 PMCID: PMC8032391 DOI: 10.7554/elife.64541] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Accepted: 03/18/2021] [Indexed: 11/13/2022] Open
Abstract
Whether global latitudinal diversity gradients exist in rocky intertidal α-diversity and across functional groups remains unknown. Using literature data from 433 intertidal sites, we investigated α-diversity patterns across 155° of latitude, and whether local-scale or global-scale structuring processes control α-diversity. We, furthermore, investigated how the relative composition of functional groups changes with latitude. α-Diversity differed among hemispheres with a mid-latitudinal peak in the north, and a non-significant unimodal pattern in the south, but there was no support for a tropical-to-polar decrease in α-diversity. Although global-scale drivers had no discernible effect, the local-scale drivers significantly affected α-diversity, and our results reveal that latitudinal diversity gradients are outweighed by local processes. In contrast to α-diversity patterns, species richness of three functional groups (predators, grazers, and suspension feeders) declined with latitude, coinciding with an inverse gradient in algae. Polar and tropical intertidal data were sparse, and more sampling is required to improve knowledge of marine biodiversity.
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Affiliation(s)
- Jakob Thyrring
- British Antarctic Survey, Cambridge, United Kingdom.,Department of Zoology, University of British Columbia, Vancouver, Canada.,Arctic Research Centre, Department of Bioscience, Aarhus University, Silkeborg, Denmark.,Homerton College, University of Cambridge, Cambridge, United Kingdom.,Marine Ecology, Department of Bioscience, Aarhus University, Silkeborg, Denmark
| | - Lloyd S Peck
- British Antarctic Survey, Cambridge, United Kingdom
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24
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25
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Haas B, Mackay M, Novaglio C, Fullbrook L, Murunga M, Sbrocchi C, McDonald J, McCormack PC, Alexander K, Fudge M, Goldsworthy L, Boschetti F, Dutton I, Dutra L, McGee J, Rousseau Y, Spain E, Stephenson R, Vince J, Wilcox C, Haward M. The future of ocean governance. REVIEWS IN FISH BIOLOGY AND FISHERIES 2021; 32:253-270. [PMID: 33456210 PMCID: PMC7802408 DOI: 10.1007/s11160-020-09631-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Accepted: 12/11/2020] [Indexed: 05/06/2023]
Abstract
Ocean governance is complex and influenced by multiple drivers and actors with different worldviews and goals. While governance encompasses many elements, in this paper we focus on the processes that operate within and between states, civil society and local communities, and the market, including industry. Specifically, in this paper, we address the question of how to move towards more sustainable ocean governance aligning with the sustainable development goals (SDGs) and the UN Ocean Decade. We address three major risks to oceans that arise from governance-related issues: (1) the impacts of the overexploitation of marine resources; (2) inequitable distribution of access to and benefits from marine ecosystem services, and (3) inadequate or inappropriate adaptation to changing ocean conditions. The SDGs have been used as an underlying framework to develop these risks. We identify five drivers that may determine how ocean governance evolves, namely formal rules and institutions, evidence and knowledge-based decision-making, legitimacy of decision-making institutions, stakeholder engagement and participation, and empowering communities. These drivers were used to define two alternative futures by 2030: (a) 'Business as Usual'-a continuation of current trajectories and (b) 'More Sustainable Future'-optimistic, transformational, but technically achievable. We then identify what actions, as structured processes, can reduce the three major governance-related risks and lead to the More Sustainable Future. These actions relate to the process of co-creation and implementation of improved, comprehensive, and integrated management plans, enhancement of decision-making processes, and better anticipation and consideration of ambiguity and uncertainty. Supplementary information The online version of this article (10.1007/s11160-020-09631-x) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Bianca Haas
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Mary Mackay
- CSIRO, Oceans and Atmosphere, Castray Esplanade, Battery Point, TAS 7004 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Camilla Novaglio
- CSIRO, Oceans and Atmosphere, Castray Esplanade, Battery Point, TAS 7004 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Liam Fullbrook
- School of Social Sciences, College of Arts, Law and Education, University of Tasmania, Private Bag 22, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Michael Murunga
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Carla Sbrocchi
- Faculty of Arts and Social Sciences, University of Technology Sydney, PO Box 123, Broadway, 2007 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Jan McDonald
- Faculty of Law, University of Tasmania, Private Bag 89, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Phillipa C. McCormack
- Faculty of Law, University of Tasmania, Private Bag 89, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Karen Alexander
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Maree Fudge
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Lyn Goldsworthy
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Fabio Boschetti
- CSIRO Oceans and Atmosphere, Crawley, WA Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Ian Dutton
- Department of Primary Industries Parks, Water and Environment, GPO Box 44, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Leo Dutra
- CSIRO Oceans and Atmosphere, St Lucia 4067, Brisbane, QLD Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Jeffrey McGee
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Faculty of Law, University of Tasmania, Private Bag 89, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Yannick Rousseau
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Erica Spain
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
| | - Robert Stephenson
- CSIRO, Oceans and Atmosphere, Castray Esplanade, Battery Point, TAS 7004 Australia
- Fisheries and Oceans Canada, Ottawa, Canada
- University of New Brunswick, Fredericton, Canada
- St. Andrews Biological Station, St. Andrews, NB Canada
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Joanna Vince
- School of Social Sciences, College of Arts, Law and Education, University of Tasmania, Private Bag 22, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Chris Wilcox
- CSIRO, Oceans and Atmosphere, Castray Esplanade, Battery Point, TAS 7004 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
| | - Marcus Haward
- Institute for Marine and Antarctic Studies, Private Bag 129, Hobart, TAS 7001 Australia
- Centre for Marine Socioecology, University of Tasmania, Private Bag 129, Hobart, TAS 7001 Australia
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26
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Lin H, Corkrey R, Kaschner K, Garilao C, Costello MJ. Latitudinal diversity gradients for five taxonomic levels of marine fish in depth zones. Ecol Res 2020. [DOI: 10.1111/1440-1703.12193] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Han‐Yang Lin
- Institute of Marine Science The University of Auckland Auckland New Zealand
| | - Ross Corkrey
- Tasmanian Institute of Agriculture University of Tasmania Hobart Australia
| | - Kristin Kaschner
- Department of Biometry and Environmental Systems Analysis University of Freiburg Freiburg Germany
| | | | - Mark J. Costello
- School of Environment The University of Auckland Auckland New Zealand
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27
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Webb TJ, Vanhoorne B. Linking dimensions of data on global marine animal diversity. Philos Trans R Soc Lond B Biol Sci 2020; 375:20190445. [PMID: 33131434 DOI: 10.1098/rstb.2019.0445] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Abstract
Recent decades have seen an explosion in the amount of data available on all aspects of biodiversity, which has led to data-driven approaches to understand how and why diversity varies in time and space. Global repositories facilitate access to various classes of species-level data including biogeography, genetics and conservation status, which are in turn required to study different dimensions of diversity. Ensuring that these different data sources are interoperable is a challenge as we aim to create synthetic data products to monitor the state of the world's biodiversity. One way to approach this is to link data of different classes, and to inventory the availability of data across multiple sources. Here, we use a comprehensive list of more than 200 000 marine animal species, and quantify the availability of data on geographical occurrences, genetic sequences, conservation assessments and DNA barcodes across all phyla and broad functional groups. This reveals a very uneven picture: 44% of species are represented by no record other than their taxonomy, but some species are rich in data. Although these data-rich species are concentrated into a few taxonomic and functional groups, especially vertebrates, data are spread widely across marine animals, with members of all 32 phyla represented in at least one database. By highlighting gaps in current knowledge, our census of marine diversity data helps to prioritize future data collection activities, as well as emphasizing the importance of ongoing sustained observations and archiving of existing data into global repositories. This article is part of the theme issue 'Integrative research perspectives on marine conservation'.
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Affiliation(s)
- Thomas J Webb
- Department of Animal and Plant Sciences, University of Sheffield, Sheffield S10 2TN, UK
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28
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Guerra CA, Heintz-Buschart A, Sikorski J, Chatzinotas A, Guerrero-Ramírez N, Cesarz S, Beaumelle L, Rillig MC, Maestre FT, Delgado-Baquerizo M, Buscot F, Overmann J, Patoine G, Phillips HRP, Winter M, Wubet T, Küsel K, Bardgett RD, Cameron EK, Cowan D, Grebenc T, Marín C, Orgiazzi A, Singh BK, Wall DH, Eisenhauer N. Blind spots in global soil biodiversity and ecosystem function research. Nat Commun 2020; 11:3870. [PMID: 32747621 PMCID: PMC7400591 DOI: 10.1038/s41467-020-17688-2] [Citation(s) in RCA: 101] [Impact Index Per Article: 25.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2019] [Accepted: 07/10/2020] [Indexed: 11/09/2022] Open
Abstract
Soils harbor a substantial fraction of the world's biodiversity, contributing to many crucial ecosystem functions. It is thus essential to identify general macroecological patterns related to the distribution and functioning of soil organisms to support their conservation and consideration by governance. These macroecological analyses need to represent the diversity of environmental conditions that can be found worldwide. Here we identify and characterize existing environmental gaps in soil taxa and ecosystem functioning data across soil macroecological studies and 17,186 sampling sites across the globe. These data gaps include important spatial, environmental, taxonomic, and functional gaps, and an almost complete absence of temporally explicit data. We also identify the limitations of soil macroecological studies to explore general patterns in soil biodiversity-ecosystem functioning relationships, with only 0.3% of all sampling sites having both information about biodiversity and function, although with different taxonomic groups and functions at each site. Based on this information, we provide clear priorities to support and expand soil macroecological research.
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Affiliation(s)
- Carlos A Guerra
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany. .,Institute of Biology, Martin Luther University Halle Wittenberg, Am Kirchtor 1, 06108, Halle(Saale), Germany.
| | - Anna Heintz-Buschart
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Helmholtz Centre for Environmental Research - UFZ, Department of Soil Ecology, 06108, Halle(Saale), Germany
| | - Johannes Sikorski
- Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen, Braunschweig, Germany
| | - Antonis Chatzinotas
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Helmholtz Centre for Environmental Research - UFZ, Department of Environmental Microbiology, Leipzig, Germany
| | - Nathaly Guerrero-Ramírez
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Institute of Biology, Leipzig University, Leipzig, Germany
| | - Simone Cesarz
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Institute of Biology, Leipzig University, Leipzig, Germany
| | - Léa Beaumelle
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Institute of Biology, Leipzig University, Leipzig, Germany
| | - Matthias C Rillig
- Freie Universität Berlin, Institut für Biologie, Altensteinstr. 6, 14195, Berlin, Germany.,Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Altensteinstr. 34, 14195, Berlin, Germany
| | - Fernando T Maestre
- Departamento de Biología y Geología, Física y Química Inorgánica, Escuela Superior de Ciencias Experimentales y Tecnología, Universidad Rey Juan Carlos, Calle Tulipán Sin Número, Móstoles, 28933, Spain.,Departamento de Ecología and Instituto Multidisciplinar para el Estudio del Medio "Ramón Margalef, Universidad de Alicante, Carretera de San Vicente del Raspeig s/n, 03690 San Vicente del Raspeig, Alicante, Spain
| | - Manuel Delgado-Baquerizo
- Departamento de Biología y Geología, Física y Química Inorgánica, Escuela Superior de Ciencias Experimentales y Tecnología, Universidad Rey Juan Carlos, Calle Tulipán Sin Número, Móstoles, 28933, Spain
| | - François Buscot
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Helmholtz Centre for Environmental Research - UFZ, Department of Soil Ecology, 06108, Halle(Saale), Germany
| | - Jörg Overmann
- Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen, Braunschweig, Germany.,Microbiology, Braunschweig University of Technology, Braunschweig, Germany
| | - Guillaume Patoine
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Institute of Biology, Leipzig University, Leipzig, Germany
| | - Helen R P Phillips
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Institute of Biology, Leipzig University, Leipzig, Germany
| | - Marten Winter
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Institute of Biology, Leipzig University, Leipzig, Germany
| | - Tesfaye Wubet
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Helmholtz Centre for Environmental Research - UFZ, Department of Community Ecology, Braunschweig, Germany
| | - Kirsten Küsel
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Institute of Biodiversity, Friedrich Schiller University Jena, Dornburger-Straße 159, 07743, Jena, Germany
| | - Richard D Bardgett
- School of Earth and Environmental Sciences, The University of Manchester, Manchester, M13 9PT, UK
| | - Erin K Cameron
- Department of Environmental Science, Saint Mary's University, Halifax, NS, Canada
| | - Don Cowan
- Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa
| | - Tine Grebenc
- Slovenian Forestry Institute, Večna pot 2, SI-1000, Ljubljana, Slovenia
| | - César Marín
- Instituto de Ciencias Agronómicas y Veterinarias, Universidad de O'Higgins, Rancagua, Chile.,Instituto de Ciencias Ambientales y Evolutivas, Universidad Austral de Chile, Valdivia, Chile
| | | | - Brajesh K Singh
- Hawkesbury Institute for the environment, Western Sydney University, Penrith, NSW, 2751, Australia.,Global Centre for Land-Based Innovation, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Diana H Wall
- School of Global Environmental Sustainability and Department of Biology, Colorado State University, Fort Collins, CO, 80523-1036, USA
| | - Nico Eisenhauer
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.,Institute of Biology, Leipzig University, Leipzig, Germany
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29
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Webb TJ, Lines A, Howarth LM. Occupancy-derived thermal affinities reflect known physiological thermal limits of marine species. Ecol Evol 2020; 10:7050-7061. [PMID: 32760510 PMCID: PMC7391554 DOI: 10.1002/ece3.6407] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2019] [Revised: 04/28/2020] [Accepted: 04/30/2020] [Indexed: 11/30/2022] Open
Abstract
Predicting how species will respond to increased environmental temperatures is key to understanding the ecological consequences of global change. The physiological tolerances of a species define its thermal limits, while its thermal affinity is a summary of the environmental temperatures at the localities at which it actually occurs. Experimentally derived thermal limits are known to be related to observed latitudinal ranges in marine species, but accurate range maps from which to derive latitudinal ranges are lacking for many marine species. An alternative approach is to combine widely available data on global occurrences with gridded global temperature datasets to derive measures of species-level "thermal affinity"-that is, measures of the central tendency, variation, and upper and lower bounds of the environmental temperatures at the locations at which a species has been recorded to occur. Here, we test the extent to which such occupancy-derived measures of thermal affinity are related to the known thermal limits of marine species using data on 533 marine species from 24 taxonomic classes and with experimentally derived critical upper temperatures spanning 2-44.5°C. We show that thermal affinity estimates are consistently and positively related to the physiological tolerances of marine species, despite gaps and biases in the source data. Our method allows thermal affinity measures to be rapidly and repeatably estimated for many thousands more marine species, substantially expanding the potential to assess vulnerability of marine communities to warming seas.
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Affiliation(s)
- Thomas J. Webb
- Department of Animal and Plant SciencesUniversity of SheffieldSheffieldUK
| | - Aaron Lines
- Department of Animal and Plant SciencesUniversity of SheffieldSheffieldUK
| | - Leigh M. Howarth
- Department of Animal and Plant SciencesUniversity of SheffieldSheffieldUK
- Life Sciences CentreDalhousie UniversityHalifaxNSCanada
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30
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Abstract
A major research question concerning global pelagic biodiversity remains unanswered: when did the apparent tropical biodiversity depression (i.e., bimodality of latitudinal diversity gradient [LDG]) begin? The bimodal LDG may be a consequence of recent ocean warming or of deep-time evolutionary speciation and extinction processes. Using rich fossil datasets of planktonic foraminifers, we show here that a unimodal (or only weakly bimodal) diversity gradient, with a plateau in the tropics, occurred during the last ice age and has since then developed into a bimodal gradient through species distribution shifts driven by postglacial ocean warming. The bimodal LDG likely emerged before the Anthropocene and industrialization, and perhaps ∼15,000 y ago, indicating a strong environmental control of tropical diversity even before the start of anthropogenic warming. However, our model projections suggest that future anthropogenic warming further diminishes tropical pelagic diversity to a level not seen in millions of years.
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Yue T, Liu H, Long R, Chen H, Gan X, Liu J. Research trends and hotspots related to global carbon footprint based on bibliometric analysis: 2007-2018. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:17671-17691. [PMID: 32215795 DOI: 10.1007/s11356-020-08158-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2019] [Accepted: 02/19/2020] [Indexed: 06/10/2023]
Abstract
As an important indicator of greenhouse gas emissions, the carbon footprint (CF) has become increasingly important in recent years under the dual pressures of global warming and international commitments to mitigate its effects. This study collected 3698 papers related to CF from the Web of Science database as research samples (year 2007 to 2018). Based on CiteSpace, the knowledge base, popular topics, and research trends of CF are presented. The results show the following: (1) from 2007 to 2018, the number of articles on CF have steadily increased. (2) After spatial analysis of the literature, we found that among research institutions, the Chinese Academy of Sciences has the largest number of publications on the issue. When it comes to country, three important research forces can be identified: USA, China, and UK. (3) Research on the CF is interdisciplinary; in addition to the traditional fields of environmental, political, economics, and computing, CF research has received attention from the Physics, Materials, Chemistry, Mathematics, and animal sciences. (4) Through keyword clustering, currently popular topics in research can be roughly divided into four aspects: CF calculation methods, research scales, energy, and agriculture. (5) The CF research during the study period is divided into four stages according to the burst time and content of the burst keywords. According to the research status and trend, this paper puts forward the future research direction of carbon footprint.
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Affiliation(s)
- Ting Yue
- School of Management, China University of Mining and Technology, Xuzhou, 221000, Jiangsu province, China.
| | - Haiwen Liu
- School of Management, China University of Mining and Technology, Xuzhou, 221000, Jiangsu province, China
| | - Ruyin Long
- School of Management, China University of Mining and Technology, Xuzhou, 221000, Jiangsu province, China
| | - Hong Chen
- School of Management, China University of Mining and Technology, Xuzhou, 221000, Jiangsu province, China
| | - Xin Gan
- School of Management, China University of Mining and Technology, Xuzhou, 221000, Jiangsu province, China
| | - Junli Liu
- School of Management, China University of Mining and Technology, Xuzhou, 221000, Jiangsu province, China
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Moudrý V, Devillers R. Quality and usability challenges of global marine biodiversity databases: An example for marine mammal data. ECOL INFORM 2020. [DOI: 10.1016/j.ecoinf.2020.101051] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Newman DJ. The impact of decreasing biodiversity on novel drug discovery: is there a serious cause for concern? Expert Opin Drug Discov 2019; 14:521-525. [PMID: 30902034 DOI: 10.1080/17460441.2019.1593370] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
INTRODUCTION The aim of this perspective is to discuss the current and potential situation concerning the loss of biodiversity and its current and potential effects upon the search for novel bioactive agents from natural sources, be they from marine, microbial or terrestrial environments. Areas covered: Herein, the author covers terrestrial plants, marine organisms (but not vertebrates), and unicellular microbes from both terrestrial and marine sources. The emphasis is on the unknown effects of biodiversity perturbation and/or loss of microbes that are now realized to underlie the production of a significant number of natural products, whether they were first found in plants or marine invertebrates. Expert opinion: From the discussion of the areas above comes the realization that we do not know what we still have. Furthermore, we cannot measure, other than in very gross terms, what we have lost. Thus, deciding how, and where geographically, one should now search for novel bioactive agents is a major and continuing problem.
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