1
|
Małecka M, Sobiesiak M, Chęcińska L, Kozakiewicz-Piekarz A, Napiórkowska-Mastalerz M, Ziomkowska B, Stepniak A, Kupcewicz B. Fluorescent properties in solid-state and solution of novel tricyclic derivatives of chloro/bromophenylchromanones and 2-methylpyrazoline. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2024; 308:123715. [PMID: 38103355 DOI: 10.1016/j.saa.2023.123715] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 11/27/2023] [Accepted: 11/28/2023] [Indexed: 12/19/2023]
Abstract
In this work, we reported the synthesis and spectroscopic characterization of seven novel tricyclic compounds resulting from the reaction of 3-benzylidenechromanone with Cl or Br substituent in different positions and without halogen with methylhydrazine. The structural characterization of compounds was done through different techniques i.e., FTIR,1HNMR,a single and powder X-Ray diffraction. Moreover, fluorescence quantum yield and lifetime assessed their fluorescent properties in the solid state and various solvents. Derivatives with Cl or Br substituent in positions 2 and 4 are isostructural. 4-Cl, 4-Br and 3-Cl compounds exhibit fluorescence with moderate efficiency (quantum yield 0.11-0.26) in solid state due to specific arrangements, so-called π-stack brick stone with head-to-tail self-assembly. Other crystalline compounds (2-Cl, 2-Br and 3-Br) that exhibit negligible fluorescence quantum yield have crossed V-type arrangement. In the solution, the nonhalogenated compound shows the best fluorescence efficiency. In turn, the presence of halogen atoms results in fluorescence decreasing. TD-DFT study revealed that unsubstituted compound higher emissive in solution has a different electron density distribution at HOMO and LUMO levels than less emissive substituted compounds (A3 and A3).
Collapse
Affiliation(s)
- Magdalena Małecka
- University of Lodz, Faculty of Chemistry, Department of Physical Chemistry, Pomorska 163/165, 90-236 Lodz, Poland.
| | - Marta Sobiesiak
- Department of Inorganic and Analytical Chemistry, Faculty of Pharmacy, Nicolaus Copernicus University, Jurasza 2, 85-089 Bydgoszcz, Poland.
| | - Lilianna Chęcińska
- University of Lodz, Faculty of Chemistry, Department of Physical Chemistry, Pomorska 163/165, 90-236 Lodz, Poland
| | - Anna Kozakiewicz-Piekarz
- Department of Biomedical and Polymer Chemistry, Faculty of Chemistry, Nicolaus Copernicus University, Gagarina 7, 87-100 Torun, Poland
| | - Marta Napiórkowska-Mastalerz
- Department of Biophysics, Faculty of Pharmacy, Nicolaus Copernicus University, Jagiellonska 15, 85-089 Bydgoszcz, Poland
| | - Blanka Ziomkowska
- Department of Biophysics, Faculty of Pharmacy, Nicolaus Copernicus University, Jagiellonska 15, 85-089 Bydgoszcz, Poland
| | - Artur Stepniak
- University of Lodz, Faculty of Chemistry, Department of Physical Chemistry, Pomorska 163/165, 90-236 Lodz, Poland
| | - Bogumiła Kupcewicz
- Department of Inorganic and Analytical Chemistry, Faculty of Pharmacy, Nicolaus Copernicus University, Jurasza 2, 85-089 Bydgoszcz, Poland
| |
Collapse
|
2
|
Stabilization of Near Identical Hydrogen Bonded Octameric Water Clusters in Crystal Structures of Three Distinct Non-Charged Polyamide Macrocyclic Host Molecules. Molecules 2021; 26:molecules26092787. [PMID: 34065060 PMCID: PMC8125911 DOI: 10.3390/molecules26092787] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2021] [Revised: 04/27/2021] [Accepted: 05/06/2021] [Indexed: 11/16/2022] Open
Abstract
In this paper, we present a comparative analysis of the solid state structures of three well-resolved hydrates of macrocyclic host molecules 1a, 1b, and 2 containing an intrannular amide-aryl substituent (lariat arm) connected to a fixed 26-membered ring in a normal (-NHCOAr, hosts 1a and 1b) or reverse manner (-CONHAr, host 2). Despite different chemical structures, these hosts crystallize as isostructural tetrahydrates in the same P-1 space group. Moreover, their crystals exhibit identical hydrogen bond motifs resulting in a stabilization of an almost identical unusual octameric water cluster built from the cyclic tetramer core and four water molecules, attached sequentially in an "up-and-down" manner. Further analysis reveals that, among the series, the structure of host 2 provides the most suitable environment for the accommodation of this type of water cluster.
Collapse
|
3
|
Saidykhan A, Fenwick NW, Bowen RD, Telford R, Seaton CC. Isostructurality of quinoxaline crystal phases: the interplay of weak hydrogen bonds and halogen bonding. CrystEngComm 2021. [DOI: 10.1039/d1ce00878a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Creation of isostructural systems is a balance between thermodynamic and kinetic factors, shown by a set of substituted quinoxalines, where the lighter halogens form a set of metastable isostructural crystals, different to the heavy substitutions.
Collapse
Affiliation(s)
- Amie Saidykhan
- School of Chemistry and Biosciences, University of Bradford, Bradford, Richmond Road, Bradford BD7 1DP, UK
| | - Nathan W. Fenwick
- School of Chemistry and Biosciences, University of Bradford, Bradford, Richmond Road, Bradford BD7 1DP, UK
| | - Richard D. Bowen
- School of Chemistry and Biosciences, University of Bradford, Bradford, Richmond Road, Bradford BD7 1DP, UK
| | - Richard Telford
- School of Chemistry and Biosciences, University of Bradford, Bradford, Richmond Road, Bradford BD7 1DP, UK
| | - Colin C. Seaton
- School of Chemistry and Biosciences, University of Bradford, Bradford, Richmond Road, Bradford BD7 1DP, UK
| |
Collapse
|
4
|
Hazarika PJ, Gupta P, Gunnam A, Allu S, Nangia AK, Nath NK. Photomechanical response of sulfonylhydrazone molecular crystals. CrystEngComm 2021. [DOI: 10.1039/d1ce00478f] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Photomechanical responses of the single crystals of a series of sulfonylhydrazones are explored for the first time.
Collapse
Affiliation(s)
- Pragyan J. Hazarika
- Department of Chemistry
- National Institute of Technology
- Meghalaya 793003
- India
| | - Poonam Gupta
- Department of Chemistry
- National Institute of Technology
- Meghalaya 793003
- India
| | | | | | | | - Naba K. Nath
- Department of Chemistry
- National Institute of Technology
- Meghalaya 793003
- India
| |
Collapse
|
5
|
Amoah C, Obuah C, Ainooson MK, Adokoh CK, Muller A. Synthesis, characterization and antibacterial applications of pyrazolyl-sulfonamides and their palladium complexes. NEW J CHEM 2021. [DOI: 10.1039/d0nj05143h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Pyrazolylsulphonamides compounds and their palladium complexes exhibiting good potential anti-bacterial activities.
Collapse
Affiliation(s)
- Cephas Amoah
- Department of Chemistry
- University of Ghana
- Legon
- Ghana
- Department of Chemical Sciences
| | - Collins Obuah
- Department of Chemistry
- University of Ghana
- Legon
- Ghana
- Department of Chemical Sciences
| | | | - Christian Kwaku Adokoh
- Department of Chemical Sciences
- University of Johannesburg
- Auckland Park 2006
- Johannesburg
- South Africa
| | - Alfred Muller
- Department of Chemical Sciences
- University of Johannesburg
- Auckland Park 2006
- Johannesburg
- South Africa
| |
Collapse
|
6
|
Sahoo PR, Kumar A, Kumar A, Kumar S. Experimental and computational investigation of polymorphism in methyl 3-hydroxy-4-(piperidin-1-ylmethyl)-2-naphthoate. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128619] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
|
7
|
Mali BP, Dash SR, Nikam SB, Puthuvakkal A, Vanka K, Manoj K, Gonnade RG. Five concomitant polymorphs of a green fluorescent protein chromophore (GFPc) analogue: understanding variations in photoluminescence with π-stacking interactions. ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2020; 76:850-864. [PMID: 33017318 DOI: 10.1107/s2052520620010343] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2020] [Accepted: 07/26/2020] [Indexed: 06/11/2023]
Abstract
The synthetically modified green fluorescent protein chromophore analogue 3,4,5-trimethoxybenzylidene imidazolinone (1) yielded five polymorphs (I, II, III, IV, V) concomitantly irrespective of the solvent used for crystallization. The pentamorphic modification of 1 is solely due to the interplay of iso-energetic weak intermolecular interactions in molecular associations as well as the conformational flexibility offered by a C-C single bond, which connects the electron-deficient moiety imidazolinone with the electron-rich trimethoxybenzylidene group. A common structural feature observed in all the polymorphs is the formation of a `zero-dimensional' centrosymmetric dimeric unit through a short and linear C-H...O hydrogen bond engaging phenyl C-H and imidazolinone carbonyl oxygen. However, the networking of these dimeric units showed a subtle difference in all the polymorphs. The 2D isostructurality was observed between polymorphs I, II and III, while the other two polymorphs IV and V revealed only `zero-dimensional' isostructurality. The different fluorescence emissions of Form I (blue) and Forms II to V (yellow) were attributed to the differences in π-stacking interactions. It shows that one can modulate the photophysical properties of these smart materials by slightly altering their crystal structure. Such an approach will aid in developing new multi-colour organic fluorescent materials of varying crystal structures for live-cell imaging and fluorescent sensing applications.
Collapse
Affiliation(s)
- Bhupendra P Mali
- Physical and Materials Chemistry Division, CSIR-National Chemical Laboratory, Dr Homi Bhabha Road, Pashan/Pune, Maharashtra 411008, India
| | - Soumya Ranjan Dash
- Physical and Materials Chemistry Division, CSIR-National Chemical Laboratory, Dr Homi Bhabha Road, Pashan/Pune, Maharashtra 411008, India
| | - Shrikant B Nikam
- Physical and Materials Chemistry Division, CSIR-National Chemical Laboratory, Dr Homi Bhabha Road, Pashan/Pune, Maharashtra 411008, India
| | - Anisha Puthuvakkal
- Photosciences and Photonics, Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram, Kerala 695019, India
| | - Kumar Vanka
- Physical and Materials Chemistry Division, CSIR-National Chemical Laboratory, Dr Homi Bhabha Road, Pashan/Pune, Maharashtra 411008, India
| | - Kochunnoonny Manoj
- Photosciences and Photonics, Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram, Kerala 695019, India
| | - Rajesh G Gonnade
- Physical and Materials Chemistry Division, CSIR-National Chemical Laboratory, Dr Homi Bhabha Road, Pashan/Pune, Maharashtra 411008, India
| |
Collapse
|
8
|
Kumar A, Kumar A, Sahoo PR, Kumar S. A light controlled, reversible, sensitive and highly selective colorimetric sensor for mercuric ions in water. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.127702] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
|
9
|
Barbas R, Bofill L, de Sande D, Font-Bardia M, Prohens R. Crystal engineering of nutraceutical phytosterols: new cocrystal solid solutions. CrystEngComm 2020. [DOI: 10.1039/d0ce00704h] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
A cocrystal screening of solid solutions of three phytosterols (β-sitosterol, campesterol, stigmasterol) reveals that cocrystal solid solutions are enriched with β-sitosterol with respect to stigmasterol, a natural product with cytotoxicity concerns.
Collapse
Affiliation(s)
- Rafael Barbas
- Unitat de Polimorfisme i Calorimetria
- Centres Científics i Tecnològics
- Universitat de Barcelona
- 08028 Barcelona
- Spain
| | - Lídia Bofill
- Center for Intelligent Research in Crystal Engineering S.L
- Palma de Mallorca
- Spain
| | - Dafne de Sande
- Unitat de Polimorfisme i Calorimetria
- Centres Científics i Tecnològics
- Universitat de Barcelona
- 08028 Barcelona
- Spain
| | - Mercè Font-Bardia
- Unitat de Difracció de Raigs X
- Centres Científics i Tecnològics
- Universitat de Barcelona
- Spain
| | - Rafel Prohens
- Unitat de Polimorfisme i Calorimetria
- Centres Científics i Tecnològics
- Universitat de Barcelona
- 08028 Barcelona
- Spain
| |
Collapse
|
10
|
Synthesis and optical properties of copper(II) and nickel(II) complexes of a highly fluorescent morpholine-derivative. Polyhedron 2019. [DOI: 10.1016/j.poly.2019.07.044] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
|
11
|
Intermolecular Interactions in Functional Crystalline Materials: From Data to Knowledge. CRYSTALS 2019. [DOI: 10.3390/cryst9090478] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Intermolecular interactions of organic, inorganic, and organometallic compounds are the key to many composition–structure and structure–property networks. In this review, some of these relations and the tools developed by the Cambridge Crystallographic Data Center (CCDC) to analyze them and design solid forms with desired properties are described. The potential of studies supported by the Cambridge Structural Database (CSD)-Materials tools for investigation of dynamic processes in crystals, for analysis of biologically active, high energy, optical, (electro)conductive, and other functional crystalline materials, and for the prediction of novel solid forms (polymorphs, co-crystals, solvates) are discussed. Besides, some unusual applications, the potential for further development and limitations of the CCDC software are reported.
Collapse
|
12
|
Colorimetric and Fluorescence-Based Detection of Mercuric Ion Using a Benzothiazolinic Spiropyran. CHEMOSENSORS 2019. [DOI: 10.3390/chemosensors7030035] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
A merocyanine dye as a p-toluenesulfonate salt was synthesized. The structure of the dye was characterized using IR, NMR, HR-MS and single crystal X-ray crystallography. The X-ray crystallographic studies revealed the formation of a stacked aggregated structure of the merocyanine dye. The stacking interactions were investigated using the Crystal Explorer program, which estimated the strength of the interactions between different molecular pairs. The merocyanine dye was screened for affinity towards heavy metal ions, which revealed a color change from pink to colorless in the presence of mercuric ions, while other metal ions did not produce a similar change in color. In addition, the fluorescence spectroscopy indicated a change in the fluorescence intensity upon addition of mercuric ions. Both techniques displayed a good limit of detection value towards mercuric ions. In addition, the pixel intensity-based detection technique was also employed for the determination of limit of detection value with the help of a smartphone. The dynamic light scattering (DLS) studies indicated that the optical change occurred in the spectra of the receptor is due to the disaggregation of the receptor induced by mercuric ions. In addition, 1H-NMR studies were also used for investigating the mechanism of interaction between the receptor and the mercuric ions. The density functional theory (DFT) studies were used to investigate the formation of the complex at the molecular level, while time dependent density functional theory (TD-DFT) studies were used to understand the observed absorption spectra through the calculation of electronic excitation parameters, which indicated an increase in the energy difference between ground and the excited state.
Collapse
|
13
|
Dąbrowa K, Ceborska M, Jurczak J. Solid-state entrapment of water clusters by 26-membered pentamide unclosed cryptands – probing the para-substituent effect. Supramol Chem 2017. [DOI: 10.1080/10610278.2017.1418877] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Kajetan Dąbrowa
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | - Magdalena Ceborska
- Institute of Physical Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | - Janusz Jurczak
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| |
Collapse
|
14
|
Akune Y, Hirosawa R, Koseki A, Matsumoto S. Role of halogen substituents in a series of polymorphic 2,5-diamino-3,6-dicyanopyrazine derivatives with highly flexible groups. Z KRIST-CRYST MATER 2017. [DOI: 10.1515/zkri-2016-2007] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Abstract
The crystal structures of the ortho-X-benzyl derivatives, where X=F, Cl, Br, I, and Me, of 2,5-bis(N,N-dibenzylamino)-3,6-dicyanopyrazine dyes (C34H24N6X4) were analysed to evaluate the effect of a systematic series of structures on the occurrence of polymorphism. Detailed crystal structure analysis indicated that the thermally stable forms of the polymorphic derivatives (Cl and Br derivatives) were close-packed, whereas those of the non-polymorphic derivatives (F and I derivatives) were stabilised by an intermolecular interaction involving the ortho-substituents. In the thermally metastable forms of the polymorphic derivative, halogen-halogen and halogen-nitrogen interactions contributed to the stabilisation of these crystals in the same way as the thermally stable form of the non-polymorphic derivatives. This indicated that the ease of polymorph occurrence would require an appropriate balance between the crystal energy of the close-packed structure and that of the crystal structure generated mainly by the electrostatic interactions involving the halogens in these halogenated pyrazine derivatives. In addition, the similar tendency of the occurrence of polymorphs in these halogenated pyrazine derivatives was found in 19 sets of halogenated compounds having known crystal structures of F, Cl, Br and I derivatives including at least one polymorphic derivative in the crystal structure database.
Collapse
Affiliation(s)
- Yoko Akune
- Department of Environment and Natural Sciences, Graduate School of Environment and Information Sciences, Yokohama National University, 79-7, Tokiwadai, Hodogaya-ku, Yokohama 240-8501, Japan
| | - Risa Hirosawa
- Department of Environment and Natural Sciences, Graduate School of Environment and Information Sciences, Yokohama National University, 79-7, Tokiwadai, Hodogaya-ku, Yokohama 240-8501, Japan
| | - Atsushi Koseki
- Department of Environment and Natural Sciences, Graduate School of Environment and Information Sciences, Yokohama National University, 79-7, Tokiwadai, Hodogaya-ku, Yokohama 240-8501, Japan
| | - Shinya Matsumoto
- Department of Environment and Natural Sciences, Graduate School of Environment and Information Sciences, Yokohama National University, 79-7, Tokiwadai, Hodogaya-ku, Yokohama 240-8501, Japan
| |
Collapse
|
15
|
Sarmah KK, Boro K, Arhangelskis M, Thakuria R. Crystal structure landscape of ethenzamide: a physicochemical property study. CrystEngComm 2017. [DOI: 10.1039/c6ce02057g] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
|
16
|
Dey D, Chopra D. Occurrence of 3D isostructurality in fluorinated phenyl benzamidines. CrystEngComm 2017. [DOI: 10.1039/c6ce01924b] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
|
17
|
Suresh K, Khandavilli UBR, Gunnam A, Nangia A. Polymorphism, isostructurality and physicochemical properties of glibenclamide salts. CrystEngComm 2017. [DOI: 10.1039/c6ce02295b] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|