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Shiryaev AA, Burkhanova TM, Mitoraj MP, Kukulka M, Sagan F, Mahmoudi G, Babashkina MG, Bolte M, Safin DA. Supramolecular structures of Ni II and Cu II with the sterically demanding Schiff base dyes driven by cooperative action of preagostic and other non-covalent interactions. IUCRJ 2021; 8:351-361. [PMID: 33953922 PMCID: PMC8086159 DOI: 10.1107/s2052252521000610] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/23/2020] [Accepted: 01/18/2021] [Indexed: 06/12/2023]
Abstract
This work reports on synthesis and extensive experimental and theoretical investigations on photophysical, structural and thermal properties of the NiII and CuII discrete mononuclear homoleptic complexes [Ni(L I,II)2] and [Cu(L I,II)2] fabricated from the Schiff base dyes o-HOC6H4-CH=N-cyclo-C6H11 (HL I) and o-HOC10H6-CH=N-cyclo-C6H11 (HL II), containing the sterically crowding cyclo-hexyl units. The six-membered metallocycles adopt a clearly defined envelope conformation in [Ni(L II)2], while they are much more planar in the structures of [Ni(L I)2] and [Cu(L I,II)2]. It has been demonstrated by in-depth bonding analyses based on the ETS-NOCV and Interacting Quantum Atoms energy-decomposition schemes that application of the bulky substituents, containing several C-H groups, has led to the formation of a set of classical and unintuitive intra- and inter-molecular interactions. All together they are responsible for the high stability of [Ni(L I,II)2] and [Cu(L I,II)2]. More specifically, London dispersion dominated intramolecular C-H⋯O, C-H⋯N and C-H⋯H-C hydrogen bonds are recognized and, importantly, the attractive, chiefly the Coulomb driven, preagostic (not repulsive anagostic) C-H⋯Ni/Cu interactions have been discovered despite their relatively long distances (∼2.8-3.1 Å). All the complexes are further stabilized by the extremely efficient intermolecular C-H⋯π(benzene) and C-H⋯π(chelate) interactions, where both the charge-delocalization and London dispersion constituents appear to be crucial for the crystal packing of the obtained complexes. All the complexes were found to be photoluminescent in CH2Cl2, with [Cu(L II)2] exhibiting the most pronounced emission - the time-dependent density-functional-theory computations revealed that it is mostly caused by metal-to-ligand charge-transfer transitions.
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Affiliation(s)
- Alexey A. Shiryaev
- University of Tyumen, Volodarskogo Street 6, Tyumen, 625003, Russian Federation
- Innovation Center for Chemical and Pharmaceutical Technologies, Ural Federal University named after the First President of Russia B. N. Yeltsin, Mira Street 19, Ekaterinburg, 620002, Russian Federation
| | - Tatyana M. Burkhanova
- University of Tyumen, Volodarskogo Street 6, Tyumen, 625003, Russian Federation
- Kurgan State University, Sovetskaya Street 63/4, 640020, Russian Federation
| | - Mariusz P. Mitoraj
- Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, Kraków, 30-387, Poland
| | - Mercedes Kukulka
- Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, Kraków, 30-387, Poland
| | - Filip Sagan
- Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, Kraków, 30-387, Poland
| | - Ghodrat Mahmoudi
- Department of Chemistry, Faculty of Science, University of Maragheh, PO Box 55181-83111, Maragheh, Iran
| | - Maria G. Babashkina
- Institute of Condensed Matter and Nanosciences, Université Catholique de Louvain, Place L. Pasteur 1, Louvain-la-Neuve, 1348, Belgium
| | - Michael Bolte
- Institut für Anorganische Chemie, J.-W.-Goethe-Universität, Frankfurt/Main, Germany
| | - Damir A. Safin
- University of Tyumen, Volodarskogo Street 6, Tyumen, 625003, Russian Federation
- Innovation Center for Chemical and Pharmaceutical Technologies, Ural Federal University named after the First President of Russia B. N. Yeltsin, Mira Street 19, Ekaterinburg, 620002, Russian Federation
- Kurgan State University, Sovetskaya Street 63/4, 640020, Russian Federation
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Torabi Farkhani E, Pourayoubi M, Izadyar M, Andreev PV, Shchegravina ES. The first coordination polymers with an [O] 2[N]P(S)-Hg segment: a combined experimental, theoretical and database study. Dalton Trans 2019; 48:17908-17918. [PMID: 31782450 DOI: 10.1039/c9dt03546j] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
The study of one-dimensional coordination polymers {Hg2Cl4L1}n (1), {HgBr2L1}n (2) and {Hg2Cl4L2}n (3) (L1 = (S)P(OC2H5)2NHC6H4NHP(S)(OC2H5)2 and L2 = (S)P(OC2H5)2NC4H8NP(S)(OC2H5)2) is the first such structural study of Hg(ii) coordination polymers with (O)2(N)PS-based ligands. The mercury atoms adopt a distorted trigonal pyramidal environment, Hg(Cl)3(S) for 1 and 3 and Hg(Br)2(S)2 for 2, and the difference observed in the stoichiometry of mercury halide to the thiophosphoramide ligand in 1 and 3 with respect to the one in 2 is a result of the formation of the Hg2Cl2 ring, however, the molar ratio 2 : 1 of HgX2 (X = Cl and Br) to ligand was used for the preparation of all three complexes. The strengths of mercury-sulfur and mercury-halide covalent bonds are evaluated by theoretical calculations (QTAIM and NBO) which show their principally electrostatic nature with a partial covalent contribution. The energies of interactions building supramolecular assemblies and intramolecular interactions, i.e. NHCl, NHBr, CHCl, CHBr, CHO, CHS and CHπ, are theoretically evaluated. The characteristic structural features arising from the aromatic/aliphatic linkers in the ligands and chloride/bromide attached to mercury are investigated by Hirshfeld surface analysis and fingerprint plots.
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Affiliation(s)
- Elham Torabi Farkhani
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran.
| | - Mehrdad Pourayoubi
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran.
| | - Mohammad Izadyar
- Department of Chemistry, Faculty of Science, Ferdowsi University of Mashhad, Mashhad, Iran.
| | - Pavel V Andreev
- Department of Physics, N. I. Lobachevsky State University of Nizhni Novgorod, pr. Gagarina, 23-3, Nizhni Novgorod, Russia
| | - Ekaterina S Shchegravina
- Department of Chemistry, Lobachevsky State University of Nizhni Novgorod, Gagarin Avenue, 23, Nizhni Novgorod, Russia
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Mitoraj MP, Babashkina MG, Robeyns K, Sagan F, Szczepanik DW, Seredina YV, Garcia Y, Safin DA. Chameleon-like Nature of Anagostic Interactions and Its Impact on Metalloaromaticity in Square-Planar Nickel Complexes. Organometallics 2019. [DOI: 10.1021/acs.organomet.9b00062] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Mariusz P. Mitoraj
- Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Cracow, Poland
| | - Maria G. Babashkina
- Institute of Condensed Matter and Nanosciences, Université Catholique de Louvain, Place L. Pasteur 1, 1348 Louvain-la-Neuve, Belgium
- Institute of Chemistry, University of Tyumen, Perekopskaya Street 15a, 625003 Tyumen, Russian Federation
| | - Koen Robeyns
- Institute of Condensed Matter and Nanosciences, Université Catholique de Louvain, Place L. Pasteur 1, 1348 Louvain-la-Neuve, Belgium
| | - Filip Sagan
- Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Cracow, Poland
| | - Dariusz W. Szczepanik
- Department of Theoretical Chemistry, Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Cracow, Poland
| | - Yulia V. Seredina
- Institute of Chemistry, University of Tyumen, Perekopskaya Street 15a, 625003 Tyumen, Russian Federation
| | - Yann Garcia
- Institute of Condensed Matter and Nanosciences, Université Catholique de Louvain, Place L. Pasteur 1, 1348 Louvain-la-Neuve, Belgium
| | - Damir A. Safin
- Institute of Condensed Matter and Nanosciences, Université Catholique de Louvain, Place L. Pasteur 1, 1348 Louvain-la-Neuve, Belgium
- Institute of Chemistry, University of Tyumen, Perekopskaya Street 15a, 625003 Tyumen, Russian Federation
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Safin DA, Babashkina MG, Mitoraj MP, Kubisiak P, Robeyns K, Bolte M, Garcia Y. An intermolecular pyrene excimer in the pyrene-labeled N-thiophosphorylated thiourea and its nickel(ii) complex. Inorg Chem Front 2016. [DOI: 10.1039/c6qi00298f] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
(1-pyrene)NHC(S)NHP(S)(OiPr)2 (HL) and its NiII complex ([NiL2]) have been synthesized. Both HL and [NiL2] were found to be emissive in solution of CH2Cl2, which is due to the concentration dependent emission of the pyrene monomer and excimer.
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Affiliation(s)
- Damir A. Safin
- Institute of Condensed Matter and Nanosciences
- Molecules
- Solids and Reactivity (IMCN/MOST)
- Université catholique de Louvain
- 1348 Louvain-la-Neuve
| | - Maria G. Babashkina
- Institute of Condensed Matter and Nanosciences
- Molecules
- Solids and Reactivity (IMCN/MOST)
- Université catholique de Louvain
- 1348 Louvain-la-Neuve
| | - Mariusz P. Mitoraj
- Department of Theoretical Chemistry
- Faculty of Chemistry
- Jagiellonian University
- 30-060 Cracow
- Poland
| | - Piotr Kubisiak
- Department of Theoretical Chemistry
- Faculty of Chemistry
- Jagiellonian University
- 30-060 Cracow
- Poland
| | - Koen Robeyns
- Institute of Condensed Matter and Nanosciences
- Molecules
- Solids and Reactivity (IMCN/MOST)
- Université catholique de Louvain
- 1348 Louvain-la-Neuve
| | - Michael Bolte
- Institut für Anorganische Chemie J.-W.-Goethe-Universität
- Frankfurt/Main
- Germany
| | - Yann Garcia
- Institute of Condensed Matter and Nanosciences
- Molecules
- Solids and Reactivity (IMCN/MOST)
- Université catholique de Louvain
- 1348 Louvain-la-Neuve
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Babashkina MG, Safin DA, Robeyns K, Garcia Y. A Neutral 1D Coordination Polymer Constructed from the Ni
II
Complex of the
N
‐Phosphorylated Thiourea PhNHC(S)NHP(O)(OPh)
2
and Pyrazine: A Single‐Source Precursor for Nickel Nanoparticles. Eur J Inorg Chem 2014. [DOI: 10.1002/ejic.201402278] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Maria G. Babashkina
- Institute of Condensed Matter and Nanosciences, Molecules, Solids and Reactivity (IMCN/MOST), Université Catholique de Louvain, Place L. Pasteur 1, 1348 Louvain‐la‐Neuve, Belgium, http://www.uclouvain.be/262038.html
| | - Damir A. Safin
- Institute of Condensed Matter and Nanosciences, Molecules, Solids and Reactivity (IMCN/MOST), Université Catholique de Louvain, Place L. Pasteur 1, 1348 Louvain‐la‐Neuve, Belgium, http://www.uclouvain.be/262038.html
| | - Koen Robeyns
- Institute of Condensed Matter and Nanosciences, Molecules, Solids and Reactivity (IMCN/MOST), Université Catholique de Louvain, Place L. Pasteur 1, 1348 Louvain‐la‐Neuve, Belgium, http://www.uclouvain.be/262038.html
| | - Yann Garcia
- Institute of Condensed Matter and Nanosciences, Molecules, Solids and Reactivity (IMCN/MOST), Université Catholique de Louvain, Place L. Pasteur 1, 1348 Louvain‐la‐Neuve, Belgium, http://www.uclouvain.be/262038.html
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Safin DA, Babashkina MG, Robeyns K, Bolte M, Garcia Y. N-Salicylidene aniline derivatives based on the N′-thiophosphorylated thiourea scaffold. CrystEngComm 2014. [DOI: 10.1039/c4ce00598h] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
A new family of thermochromic N′-thiophosphorylated thiourea-containing N-salicylidene aniline derivatives (anils) of the common formula 6-{(2-OH-aryl)–CHN}-Py-2-NHC(S)NHP(S)(OiPr)2 has been synthesized by the condensation of N-thiophosphorylated thiourea 6-NH2-Py-2-NHC(S)NHP(S)(OiPr)2 with the corresponding salicylaldehyde.
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Affiliation(s)
- Damir A. Safin
- Institute of Condensed Matter and Nanosciences
- Molecules
- Solids and Reactivity (IMCN/MOST)
- Université Catholique de Louvain
- 1348 Louvain-la-Neuve, Belgium
| | - Maria G. Babashkina
- Institute of Condensed Matter and Nanosciences
- Molecules
- Solids and Reactivity (IMCN/MOST)
- Université Catholique de Louvain
- 1348 Louvain-la-Neuve, Belgium
| | - Koen Robeyns
- Institute of Condensed Matter and Nanosciences
- Molecules
- Solids and Reactivity (IMCN/MOST)
- Université Catholique de Louvain
- 1348 Louvain-la-Neuve, Belgium
| | - Michael Bolte
- Institut für Anorganische Chemie J.-W.-Goethe-Universität
- Frankfurt/Main, Germany
| | - Yann Garcia
- Institute of Condensed Matter and Nanosciences
- Molecules
- Solids and Reactivity (IMCN/MOST)
- Université Catholique de Louvain
- 1348 Louvain-la-Neuve, Belgium
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Safin DA, Babashkina MG, Robeyns K, Rouzières M, Clérac R, Garcia Y. From a mononuclear Ni(II) precursor to antiferromagnetically coupled trinuclear double-stranded helicates. Dalton Trans 2013; 42:16470-3. [PMID: 24129371 DOI: 10.1039/c3dt52387j] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Reaction of the mononuclear Ni(II) complex [Ni{2-Py(6-NH2)NHC(S)NP(S)(OiPr)2}2] with different salicylaldehydes leads to new antiferromagnetically coupled trinuclear double-stranded helicates , where Ni(II) metal ions are coordinated by two bis-anionic thiourea ligands and two deprotonated molecules of the corresponding aldehyde.
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Affiliation(s)
- Damir A Safin
- Institute of Condensed Matter and Nanosciences, Molecules, Solids and Reactivity (IMCN/MOST), Université Catholique de Louvain, Place L. Pasteur 1, 1348 Louvain-la-Neuve, Belgium.
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