Transcriptomic insights unveil the crucial roles of cytochromes, NADH, and pili in Ag(I) reduction by Geobacter sulfurreducens

Silver (Ag) is a pivotal transition metal with applications in multiple industries, necessitating efficient recovery techniques. Despite various proposed methods for silver recovery from wastewaters, challenges persist especially for low concentrations. In this context, bioreduction by bacteria like Geobacter sulfurreducens, offers a promising approach by converting Ag(I) to Ag nanoparticles. To reveal the mechanisms driving microbial Ag(I) reduction, we conducted transcriptional profiling of G. sulfurreducens under Ag(I)-reducing condition. Integrated transcriptomic and protein-protein interaction network analyses identified significant transcriptional shifts, predominantly linked to c-type cytochromes, NADH, and pili. When compared to a pilus-deficient strain, the wild-type strain exhibited distinct cytochrome gene expressions, implying specialized functional roles. Additionally, despite a down-regulation in NADH dehydrogenase genes, we observed up-regulation of specific downstream cytochrome genes, highlighting NADH's potential role as an electron donor in the Ag(I) reduction process. Intriguingly, our findings also highlight the significant influence of pili on the morphology of the resulting Ag nanoparticles. The presence of pili led to the formation of smaller and more crystallized Ag nanoparticles. Overall, our findings underscore the intricate interplay of cytochromes, NADH, and pili in Ag(I) reduction. Such insights suggest potential strategies for further enhancing microbial Ag(I) reduction.

An Overview of Bacteria-Mediated Heavy Metal Bioremediation Strategies

Contamination-free groundwater is considered a good source of potable water. Even in the twenty-first century, over 90 percent of the population is reliant on groundwater resources for their lives. Groundwater influences the economical state, industrial development, ecological system, and agricultural and global health conditions worldwide. However, different natural and artificial processes are gradually polluting groundwater and drinking water systems throughout the world. Toxic metalloids are one of the major sources that pollute the water system. In this review work, we have collected and analyzed information on metal-resistant bacteria along with their genetic information and remediation mechanisms of twenty different metal ions [arsenic (As), mercury (Hg), lead (Pb), chromium (Cr), iron (Fe), copper (Cu), cadmium (Cd), palladium (Pd), zinc (Zn), cobalt (Co), antimony (Sb), gold (Au), silver (Ag), platinum (Pt), selenium (Se), manganese (Mn), molybdenum (Mo), nickel (Ni), tungsten (W), and uranium (U)]. We have surveyed the scientific information available on bacteria-mediated bioremediation of various metals and presented the data with responsible genes and proteins that contribute to bioremediation, bioaccumulation, and biosorption mechanisms. Knowledge of the genes responsible and self-defense mechanisms of diverse metal-resistance bacteria would help us to engineer processes involving multi-metal-resistant bacteria that may reduce metal toxicity in the environment.

Therapeutic and antioxidant potential of bionanofactory Ochrobactrum sp.-mediated magnetite and zerovalent iron nanoparticles against acute experimental toxoplasmosis

The control of toxoplasmosis, a rampant one health disease, has been focussed on conventional antitoxoplasmic agents with their adverse outcomes, including serious side effects, treatment failure and emergence of drug resistant strains. Nanobiotechnology may provide a strong impetus for versatile alternative therapies against toxoplasmosis. Bionanofactory Ochrobactrum sp. strain CNE2 was recruited for the biosynthesis of functionalized magnetite iron nanoparticles (MNPs) and nanozerovalent iron (nZVI) under aerobic and anaerobic conditions and their therapeutic efficacy was evaluated against acute toxoplasmosis in murine model. The formation of self-functionalized spherical nanoparticles varied in size, identity and surface properties were substantiated. Mice were orally administered 20 mg/kg of each formulation on the initial day of infection and continued for seven consecutive days post infection (PI). Parasitological, ultrastructural, immunological, and biochemical studies were performed for assessment of therapeutic activity of biogenic iron nanoparticles (INPs). Parasitologically, MNPs showed the highest antitoxoplasmic efficacy in terms of 96.82% and 91.87% reduction in mean tachyzoite count in peritoneal fluid and liver impression smears, respectively. Lesser percentage reductions were recorded in nZVI-treated infected subgroup (75.44% and 69.04%). In addition, scanning electron microscopy (SEM) examination revealed remarkable reduction in size and extensive damage to the surface of MNPs-treated tachyzoites. MNPs-treated infected mice revealed a statistically significant increase in the serum levels of both interferon gamma (IFN-γ) to 346.2 ± 4.6 pg/ml and reduced glutathione (GSH) to 8.83 ± 0.30 mg/dl that subsequently exerted malondialdehyde (MDA) quenching action. MNPs showed a superior promising antitoxoplasmic activity with respect to both spiramycin (SPI) and nZVI. To best of our knowledge, this is the first study of a bio-safe oral iron nanotherapeutic agent fabricated via an eco-friendly approach that offers promising potential against acute experimental toxoplasmosis.

Periplasmic biomineralization for semi-artificial photosynthesis

Semiconductor-based biointerfaces are typically established either on the surface of the plasma membrane or within the cytoplasm. In Gram-negative bacteria, the periplasmic space, characterized by its confinement and the presence of numerous enzymes and peptidoglycans, offers additional opportunities for biomineralization, allowing for nongenetic modulation interfaces. We demonstrate semiconductor nanocluster precipitation containing single- and multiple-metal elements within the periplasm, as observed through various electron- and x-ray-based imaging techniques. The periplasmic semiconductors are metastable and display defect-dominant fluorescent properties. Unexpectedly, the defect-rich (i.e., the low-grade) semiconductor nanoclusters produced in situ can still increase adenosine triphosphate levels and malate production when coupled with photosensitization. We expand the sustainability levels of the biohybrid system to include reducing heavy metals at the primary level, building living bioreactors at the secondary level, and creating semi-artificial photosynthesis at the tertiary level. The biomineralization-enabled periplasmic biohybrids have the potential to serve as defect-tolerant platforms for diverse sustainable applications.

Biosynthesis of Silver Nanoparticles Produced Using Geobacillus spp. Bacteria

Silver nanoparticles (AgNPs) are well known for their unique physical and chemical properties, which can be incorporated into a wide range of applications. The growing resistance of microorganisms to antimicrobial compounds promoted the use of AgNPs in antimicrobial therapy. AgNPs can be obtained using physical and chemical methods, but these technologies are highly unfriendly to nature and produce large amounts of side compounds (for example, sodium borohydride and N,N-dimethylformamide). Therefore, alternative technologies are required for obtaining AgNPs. This report focuses on the biosynthesis of silver nanoparticles through the reduction of Ag⁺ with the cell-free secretomes of four Geobacillus bacterial strains, namely, 18, 25, 95, and 612. Only a few studies that involved Geobacillus bacteria in the synthesis of metal nanoparticles, including AgNPs, have been reported to date. The silver nanoparticles synthesized through bio-based methods were characterized using UV-Vis spectroscopy, scanning electron microscopy (SEM), dynamic light scattering (DLS), and zeta potential measurements. UV-Vis spectroscopy showed a characteristic absorbance peak at 410-425 nm, indicative of AgNPs. SEM analysis confirmed that most nanoparticles were spherical. DLS analysis showed that the sizes of the obtained AgNPs were widely distributed, with the majority less than 100 nm in diameter, while the zeta potential values ranged from -25.7 to -31.3 mV and depended on the Geobacillus spp. strain.

Anaerobic self-assembly of a regenerable bacteria-quantum dot hybrid for solar hydrogen production

Inorganic-biological hybrid systems (bio-hybrids), comprising fermentative bacteria and inorganic semiconductor photosensitizers for synergistic utilization of solar energy and organic wastes, offer opportunities for sustainable fuel biosynthesis, but the low quantum efficiency, photosensitizer biotoxicity and inability for self-regeneration are remaining hurdles to practical application. Here, we unveil a previously neglected role of oxygen in suppressing the biosynthesis of cadmium selenide quantum dots (CdSe QDs) and the metabolic activities of Escherichia coli, and accordingly propose a simple oxygen-regulation strategy to enable the self-assembly of bacterial-QD hybrids for efficient solar hydrogen production. Shifting from aerobic to anaerobic biosynthesis significantly lowered the intracellular reactive oxygen species level and increased NADPH and thiol-protein production, enabling a two-order-of-magnitude higher bio-QD synthesis rate and resulting in CdSe-rich products. Bacteria with abundant biocompatible intracellular bio-QDs naturally formed a highly active and self-regenerable bio-hybrid and achieved a quantum efficiency of 28.7% for hydrogen production under visible light, outperforming all the existing bio-hybrids. It also exhibited high stability during cyclic operation and robust performance for treating real wastewater under simulated sunlight. Our work provides valuable new insights into the metallic nanomaterial biosynthesis process to guide the design of self-assembled bio-hybrids towards sustainable energy and environmental applications.

Microbiota-dependent TLR2 signaling reduces silver nanoparticle toxicity to zebrafish larvae

Many host-microbiota interactions depend on the recognition of microbial constituents by toll-like receptors of the host. The impacts of these interactions on host health can shape the hosts response to environmental pollutants such as nanomaterials. Here, we assess the role of toll-like receptor 2 (TLR2) signaling in the protective effects of colonizing microbiota against silver nanoparticle (nAg) toxicity to zebrafish larvae. Zebrafish larvae were exposed to nAg for two days, from 3 to 5 days post-fertilization. Using an il1ß-reporter line, we first characterized the accumulation and particle-specific inflammatory effects of nAg in the total body and intestinal tissues of the larvae. This showed that silver gradually accumulated in both the total body and intestinal tissues, yet specifically caused particle-specific inflammation on the skin of larvae. Subsequently, we assessed the effects of microbiota-dependent TLR2 signaling on nAg toxicity. This was done by comparing the sensitivity of loss-of-function zebrafish mutants for TLR2, and each of the TLR2-adaptor proteins MyD88 and TIRAP (Mal), under germ-free and microbially-colonized conditions. Irrespective of their genotype, microbially-colonized larvae were less sensitive to nAg than their germ-free siblings, supporting the previously identified protective effect of microbiota against nAg toxicity. Under germ-free conditions, tlr2, myd88 and tirap mutants were equally sensitive to nAg as their wildtype siblings. However, when colonized by microbiota, tlr2 and tirap mutants were more sensitive to nAg than their wildtype siblings. The sensitivity of microbially-colonized myd88 mutants did not differ significantly from that of wildtype siblings. These results indicate that the protective effect of colonizing microbiota against nAg-toxicity to zebrafish larvae involves TIRAP-dependent TLR2 signaling. Overall, this supports the conclusion that host-microbiota interactions affect nanomaterial toxicity to zebrafish larvae.

A New Strategy for Microbial Taxonomic Identification through Micro-Biosynthetic Gold Nanoparticles and Machine Learning

Microorganisms can serve as biological factories for the synthesis of inorganic nanomaterials that can become useful as nanocatalysts, energy-harvesting-storage components, antibacterial agents, and biomedical materials. Herein, the development of biosynthesis of inorganic nanomaterials into a simple, stable, and accurate strategy for distinguishing microorganisms from multiple classification levels (i.e., kingdom, order, genus, and species) without gene amplification, biochemical testing, or target recognition is reported. Gold nanoparticles (AuNPs) biosynthesized by different microorganisms differ in color of the solution, and their features can be characterized, including the particle size, the surface plasmon resonance (SPR) spectrum, and the surface potential. The inter-relation between the features of micro-biosynthetic AuNPs and the classification of microorganisms are exploited at different levels through machine learning to establish a taxonomic model. This model agrees well with traditional classification methods that offers a new strategy for microbial taxonomic identification. The underlying mechanism of this strategy is related to the biomolecules produced by different microorganisms including glucose, glutathione, and nicotinamide adenine dinucleotide phosphate-dependent reductase that regulate the features of micro-biosynthetic AuNPs. This work broadens the application of biosynthesis of inorganic materials through micro-biosynthetic AuNPs and machine learning, which holds great promise as a tool for biomedical research.

Biotic Process Dominated the Uptake and Transformation of Ag+ by Shewanella oneidensis MR-1

Silver ions (Ag⁺) directly emitted from industrial sources or released from manufactured Ag nanoparticles (AgNPs) in biosolid-amended soils have raised concern about the risk to ecosystems. However, our knowledge of Ag⁺ toxicity, internalization, and transformation mechanisms to bacteria is still insufficient. Here, we combine the advanced technologies of hyperspectral imaging (HSI) and single-particle inductively coupled plasma mass spectrometry to visualize the potential formed AgNPs inside the bacteria and evaluate the contributions of biological and non-biological processes in the uptake and transformation of Ag⁺ by Shewanella oneidensis MR-1. The results showed a dose-dependent toxicity of Ag⁺ to S. oneidensis MR-1 in the ferrihydrite bioreduction process, which was primarily induced by the actively internalized Ag. Moreover, both HSI and cross-section high-resolution transmission electron microscopy results confirmed that Ag inside the bacteria existed in the form of particulate. The Ag mass distribution in and around live and inactivated cells demonstrated that the uptake and transformation of Ag⁺ by S. oneidensis MR-1 were mainly via biological process. The bioaccumulation of Ag⁺ may be lethal to bacteria. A better understanding of the uptake and transformation of Ag⁺ in bacteria is central to predict and monitor the key factors that control Ag partitioning dynamics at the biointerface, which is critical to develop practical risk assessment and mitigation strategies.

Bioinspired Nanomodification Strategies: Moving from Chemical-Based Agrosystems to Sustainable Agriculture

Agrochemicals have supported the development of the agricultural economy and national population over the past century. However, excessive applications of agrochemicals pose threats to the environment and human health. In the last decades, nanoparticles (NPs) have been a hot topic in many fields, especially in agriculture, because of their physicochemical properties. Nevertheless, the prevalent methods for fabricating NPs are uneconomical and involve toxic reagents, hindering their extensive applications in the agricultural sector. In contrast, inspired by biological exemplifications from microbes and plants, their extract and biomass can act as a reducing and capping agent to form NPs without any toxic reagents. NPs synthesized through these bioinspired routes are cost-effective, ecofriendly, and high performing. With the development of nanotechnology, biosynthetic NPs (bioNPs) have been proven to be a substitute strategy for agrochemicals and traditional NPs in heavy-metal remediation of soil, promotion of plant growth, and management of plant disease with less toxicity and higher performance. Therefore, bioinspired synthesis of NPs will be an inevitable trend for sustainable development in agricultural fields. This critical review will demonstrate the bioinspired synthesis of NPs and discuss the influence of bioNPs on agricultural soil, crop growth, and crop diseases compared to chemical NPs or agrochemicals.

Photoinduced transformation of silver ion by molybdenum disulfide nanoflakes at environmentally relevant concentrations attenuates its toxicity to freshwater algae

The transformation of Ag⁺ is strongly correlated with its risks in aquatic environment. Considering the wide application of molybdenum disulfide (MoS₂) and the inevitable release into the environment, the effects of MoS₂ on Ag⁺ transformation and toxicity are of great concerns. This study revealed the pH-dependent reduction of Ag⁺ (0.5 mM) to Ag nanoparticles (AgNPs) by MoS₂ (50 mg/L) and solar irradiation obviously accelerates the AgNPs formation (2.638 mg/L per day, pH=7.0) compared with dark condition (0.637 mg/L per day), ascribing to the electrons capture from electron-hole pairs of MoS₂ by Ag⁺. Ionic strengths and natural organic matter decreased the AgNPs yield. Metallic 1 T phase of MoS₂ primarily participated in AgNPs formation and was oxidized to soluble ions (MoO₄^2-) due to the oxygen generation in valance band. The above processes also occurred between Ag⁺ and MoS₂ at environmentally relevant concentrations. Further, photoinduced transformation of Ag⁺ by MoS₂ (10-100 μg/L) significantly lowered its toxicity to freshwater algae. The AgNPs formation on MoS₂ reduced the bioavailability of Ag⁺ to algae, which was the mechanism for attenuated Ag⁺ toxicity. The provided data are helpful for better understanding the roles of MoS₂ on the environmental fates and risks of metal ions under natural conditions.

Small RNAs as a New Platform for Tuning the Biosynthesis of Silver Nanoparticles for Enhanced Material and Functional Properties

Genetic engineering of nanoparticle biosynthesis in bacteria could help facilitate the production of nanoparticles with enhanced or desired properties. However, this process remains limited due to the lack of mechanistic knowledge regarding specific enzymes and other key biological factors. Herein, we report on the ability of small noncoding RNAs (sRNAs) to affect silver nanoparticle (AgNP) biosynthesis using the supernatant from the bacterium Deinococcus radiodurans. Deletion strains of 12 sRNAs potentially involved in the oxidative stress response were constructed, and the supernatants from these strains were screened for their effect on AgNP biosynthesis. We identified several sRNA deletions that drastically decreased AgNP yield compared to the wild-type (WT) strain, suggesting the importance of these sRNAs in AgNP biosynthesis. Furthermore, AgNPs biosynthesized using the supernatants from three of these sRNA deletion strains demonstrated significantly enhanced antimicrobial and catalytic activities against environmentally relevant dyes and bacteria relative to AgNPs biosynthesized using the WT strain. Characterization of these AgNPs using electron microscopy (EM), energy-dispersive X-ray spectroscopy (EDX), X-ray photoelectron spectroscopy (XPS), and X-ray diffraction (XRD) revealed that the deletion of these small RNAs led to changes within the supernatant composition that altered AgNP properties such as the surface chemistry, surface potential, and overall composition. Taken together, our results demonstrate that modulating specific sRNA levels can affect the composition of supernatants used to biosynthesize AgNPs, resulting in AgNPs with unique material properties and improved functionality; as such, we introduce sRNAs as a new platform for genetically engineering the biosynthesis of metal nanoparticles using bacteria. Many of the sRNAs examined in this work have potential regulatory roles in oxidative stress responses; further studies into their targets could help provide insight into the specific molecular mechanisms underlying bacterial biosynthesis and metal reduction, enabling the production of nanoparticles with enhanced properties.

Microbe-Mediated Biosynthesis of Nanoparticles: Applications and Future Prospects

Nanotechnology is the science of nano-sized particles/structures (~100 nm) having a high surface-to-volume ratio that can modulate the physical, chemical and biological properties of the chemical compositions. In last few decades, nanoscience has attracted the attention of the scientific community worldwide due to its potential uses in the pharmacy, medical diagnostics and disease treatment, energy, electronics, agriculture, chemical and space industries. The properties of nanoparticles (NPs) are size and shape dependent. These characteristic features of nanoparticles can be explored for various other applications such as computer transistors, chemical sensors, electrometers, memory schemes, reusable catalysts, biosensing, antimicrobial activity, nanocomposites, medical imaging, tumor detection and drug delivery. Therefore, synthesizing nanoparticles of desired size, structure, monodispersity and morphology is crucial for the aforementioned applications. Recent advancements in nanotechnology aim at the synthesis of nanoparticles/materials using reliable, innoxious and novel ecofriendly techniques. In contrast to the traditional methods, the biosynthesis of nanoparticles of a desired nature and structure using the microbial machinery is not only quicker and safer but more environmentally friendly. Various microbes, including bacteria, actinobacteria, fungi, yeast, microalgae and viruses, have recently been explored for the synthesis of metal, metal oxide and other important NPs through intracellular and extracellular processes. Some bacteria and microalgae possess specific potential to fabricate distinctive nanomaterials such as exopolysaccharides, nanocellulose, nanoplates and nanowires. Moreover, their ability to synthesize nanoparticles can be enhanced using genetic engineering approaches. Thus, the use of microorganisms for synthesis of nanoparticles is unique and has a promising future. The present review provides explicit information on different strategies for the synthesis of nanoparticles using microbial cells; their applications in bioremediation, agriculture, medicine and diagnostics; and their future prospects.

Tumor-targeting inorganic nanomaterials synthesized by living cells

Inorganic nanomaterials (NMs) have shown potential application in tumor-targeting theranostics, owing to their unique physicochemical properties. Some living cells in nature can absorb surrounding ions in the environment and then convert them into nanomaterials after a series of intracellular/extracellular biochemical reactions. Inspired by that, a variety of living cells have been used as biofactories to produce metallic/metallic alloy NMs, metalloid NMs, oxide NMs and chalcogenide NMs, which are usually automatically capped with biomolecules originating from the living cells, benefitting their tumor-targeting applications. In this review, we summarize the biosynthesis of inorganic nanomaterials in different types of living cells including bacteria, fungi, plant cells and animal cells, accompanied by their application in tumor-targeting theranostics. The mechanisms involving inorganic-ion bioreduction and detoxification as well as biomineralization are emphasized. Based on the mechanisms, we describe the size and morphology control of the products via the modulation of precursor ion concentration, pH, temperature, and incubation time, as well as cell metabolism by a genetic engineering strategy. The strengths and weaknesses of these biosynthetic processes are compared in terms of the controllability, scalability and cooperativity during applications. Future research in this area will add to the diversity of available inorganic nanomaterials as well as their quality and biosafety.

Biogenic metallic elements in the human brain?

The chemistry of copper and iron plays a critical role in normal brain function. A variety of enzymes and proteins containing positively charged Cu+, Cu2+, Fe2+, and Fe3+ control key processes, catalyzing oxidative metabolism and neurotransmitter and neuropeptide production. Here, we report the discovery of elemental (zero-oxidation state) metallic Cu0 accompanying ferromagnetic elemental Fe0 in the human brain. These nanoscale biometal deposits were identified within amyloid plaque cores isolated from Alzheimer's disease subjects, using synchrotron x-ray spectromicroscopy. The surfaces of nanodeposits of metallic copper and iron are highly reactive, with distinctly different chemical and magnetic properties from their predominant oxide counterparts. The discovery of metals in their elemental form in the brain raises new questions regarding their generation and their role in neurochemistry, neurobiology, and the etiology of neurodegenerative disease.

Biofilms and nanoparticles: applications in agriculture

A profound need to explore eco-friendly methods to practice sustainable agriculture leads to the research and exploration of plant growth-promoting rhizobacteria (PGPRs). Biofilms are assemblages of microbial communities within a self-secreted exopolymeric matrix, adhering to different biotic and abiotic surfaces and performing a variety of desired and undesired functions. Biofilm formation by PGPRs is governed by effective root colonization of the host plant in providing plant growth promotion and stress management. Biofilms can also provide a suitable environment for the synthesis and entrapment of nanoparticles. Together, nanoparticles and PGPRs may contribute towards biocontrol and crop management. This review discusses the significance of biofilms in agriculture and their confluence with different types of nanoparticles for plant protection and improved crop production.

Biosynthesis of inorganic nanomaterials using microbial cells and bacteriophages

Inorganic nanomaterials are widely used in chemical, electronics, photonics, energy and medical industries. Preparing a nanomaterial (NM) typically requires physical and/or chemical methods that involve harsh and environmentally hazardous conditions. Recently, wild-type and genetically engineered microorganisms have been harnessed for the biosynthesis of inorganic NMs under mild and environmentally friendly conditions. Microorganisms such as microalgae, fungi and bacteria, as well as bacteriophages, can be used as biofactories to produce single-element and multi-element inorganic NMs. This Review describes the emerging area of inorganic NM biosynthesis, emphasizing the mechanisms of inorganic-ion reduction and detoxification, while also highlighting the proteins and peptides involved. We show how analysing a Pourbaix diagram can help us devise strategies for the predictive biosynthesis of NMs with high producibility and crystallinity and also describe how to control the size and morphology of the product. Here, we survey biosynthetic inorganic NMs of 55 elements and their applications in catalysis, energy harvesting and storage, electronics, antimicrobials and biomedical therapy. Furthermore, a step-by-step flow chart is presented to aid the design and biosynthesis of inorganic NMs employing microbial cells. Future research in this area will add to the diversity of available inorganic NMs but should also address scalability and purity.

Microbe-Mediated Extracellular and Intracellular Mineralization: Environmental, Industrial, and Biotechnological Applications

Microbe-mediated mineralization is ubiquitous in nature, involving bacteria, fungi, viruses, and algae. These mineralization processes comprise calcification, silicification, and iron mineralization. The mechanisms for mineral formation include extracellular and intracellular biomineralization. The mineral precipitating capability of microbes is often harnessed for green synthesis of metal nanoparticles, which are relatively less toxic compared with those synthesized through physical or chemical methods. Microbe-mediated mineralization has important applications ranging from pollutant removal and nonreactive carriers, to other industrial and biomedical applications. Herein, the different types of microbe-mediated biomineralization that occur in nature, their mechanisms, as well as their applications are elucidated to create a backdrop for future research.

Graphene oxide mediated reduction of silver ions to silver nanoparticles under environmentally relevant conditions: Kinetics and mechanisms

We systematically investigated the reduction mechanisms and reduction kinetics of silver ions (Ag ions) by graphene oxide (GO) under ambient condition. UV-vis spectroscopy, transmission electron microscopy, and electron diffraction results revealed that silver nanoparticles (Ag NPs) could be formed from aqueous Ag ions in the presence of GO at pH 8 under light. Formation of Ag NPs increased with increasing pH (7.4, 8, and 9) and temperature (from 30 to 90); however, the increasing ionic strength and dissolved oxygen reduced the Ag NPs yield. The Ag ions reduction by GO followed pseudo-first-order kinetics under both dark and light, and light irradiation significantly accelerated the Ag NPs formation induced by GO. The phenolic-OH on GO was the dominating electron donator for Ag ion reduction in dark. Exposure to light increased the concentration of phenolic-OH on the GO surface, thereby stimulating the reduction rate of Ag ions by GO. In addition, the light induced electron-hole pairs on GO surface and light activated oxygen-centered radicals on GO surface promoted the reduction of adsorbed Ag ions by GO. Our findings provide important information for the role of GO in reducing Ag ions to Ag NPs in aquatic environments, and shed light on understanding the environmental fate and risk of both Ag ions and GO materials.

Disinfection of water and wastewater by biosynthesized magnetite and zerovalent iron nanoparticles via NAP-NAR enzymes of Proteus mirabilis 10B

Disinfection of water and wastewater strongly contributes to solving the problem of water shortage in arid/semi-arid areas; cheap and ecofriendly approaches have to be used to meet water quality standards. In the present study, a green synthesis of iron nanoparticles (INPs) under aerobic and anaerobic conditions via nitrate reductases (NAP/NAR) enzymes produced by Proteus mirabilis strain 10B were employed for this target. The biosynthesized INPs were characterized; UV-Vis spectroscopy revealed surface plasmon resonance at 410 (aerobic) and 265 nm (anaerobic). XRD indicated crystalline magnetite ((MNPs) aerobically synthesized) and zerovalent INPs (ZVINPs anaerobically synthesized). EDX demonstrated strong iron signal with atomic percentages 73.3% (MNPs) and 61.7% (ZVINPs). TEM micrographs illustrated tiny, spherical, periplasmic MNPs (1.44-1.92 nm) and cytoplasmic ZVINPs with 11.7-60.8 nm. Zeta potential recorded - 31.8 mV (ZVINPs) and - 66.4 mV (MNPs) affirming colloidal stability. Moreover, the disinfection power of INPs was evaluated for standards organisms and real water (fresh, sea and salt mine) and wastewater (municipal, agricultural and industrial) samples. The results reported that INPs displayed higher antagonistic effect than iron precursor, 700 and 850 μg/mL of MNPs and ZVINPs, respectively, was sufficient to show a drastic algicidal effect on algal growth. Both types of INPs demonstrated obvious dose-dependent antibiofilm efficiency. Due to their smaller size, MNPs were more efficient than ZVINPs at the suppression of microbial growth in all examined water samples. Overall, MNPs showed superior antagonistic activity, which promotes their exploitation in enhancing water/wastewater quality.

Microbial synthesis of Pd-Pt alloy nanoparticles using Shewanella oneidensis MR-1 with enhanced catalytic activity for nitrophenol and azo dyes reduction

Bimetallic nanoparticles (NPs) often exhibit improved catalytic performance due to the electronic and spatial structure changes. Herein, a novel green biosynthesis method for Pd-Pt alloy NPs using Shewanella oneidensis MR-1 was proposed. The morphology, size and crystal structure of Pd-Pt alloy NPs were studied by a suite of characterization techniques. Results showed Pd-Pt alloy NPs were successfully synthesized inside and outside the cell. The biosynthesized Pd-Pt alloy NPs were polycrystalline and face-centered-cubic structure with the particle size ranged from 3-40 nm. Furthermore, the catalytic experiment demonstrated that the Pd-Pt alloy NPs exhibited the highest performance for the catalytic reduction of nitrophenol and azo dyes compared with the as-synthesized Pd and Pt monometallic NPs. This enlarged catalytic activity resulted from the synergistic effect of Pd and Pt element. Thereby, this paper provided a simple biosynthesis method for producing bimetallic alloy nanocatalyst with superior activity for contaminant degradation.

Silver nanomaterials in the natural environment: An overview of their biosynthesis and kinetic behavior

Silver nanomaterials (Ag NMs) are fabricated by many biological components in our environment. Recently, research on their biosynthesis and reactions has become a focus of attention. Due to the complexity of biological systems and samples, specific processes and mechanisms involving Ag NMs are difficult to identify and elucidate on the molecular and chemical-bond level. The microorganisms and composite components of plant extracts are of great interest in many biological syntheses. Although potential biomolecules have been shown to play essential roles in biological systems in Ag NM biosynthesis, the detailed mechanism of the electron transfer process and crucial molecules that control this reaction have only recently come into focus. The reactive behavior of the Ag NMs is of great significance for understanding their overall behavior and toxicity. Additionally, only limited knowledge is available about their kinetics. All reactions involve chemical bond formation, electron transfer, or electrostatic interactions. An overview is presented of the biosynthesis of Ag NMs based on molecular supports including a nitrate reductase/NADH oxidase-involved electron transfer reaction and their mechanisms in Ag⁺ reduction: quinol-mediated mechanism and superoxide-dependent mechanism, and molecular supports in plant extracts, is presented. The environmental reaction kinetics and mechanisms of the interactions of Ag NMs with substances are introduced based on the formation and classification of chemical bonds. The particle-particle reaction kinetics of Ag NMs in the environment are discussed to directly explain their stability and aggregation behavior. The toxicity of Ag NMs is also presented. In addition, future prospects are summarized. This review is the first to provide an insight into the mediating molecules and chemical bonds involved in the biosynthesis, kinetics, and mechanisms of action of Ag NMs.

A comparative study of stability, antioxidant, DNA cleavage and antibacterial activities of green and chemically synthesized silver nanoparticles

Silver nanoparticles have a wide range of research, industrial and biomedical applications that make it essential to develop a low cost and eco-friendly approach with scaling up potential. Green synthesis of nanoparticles through bio-reactions leads to a reduction of silver ions to particles could be an acceptable selection using no additional reducing chemicals. Moreover, the simplicity of scale-up processes of the method makes it more efficient than chemical and physical synthesis methods. In this study, Datura stramonium leaf extract and sodium citrate were used as biological and chemical reducing and stabilizing agents to make silver nanoparticles. The main goal is to comprise properties and evaluate antibacterial activity of nanoparticles synthesized through two approaches. Size and morphology compared between the two types of the synthesized nanoparticle by UV-Visible spectroscopy, DLS, AFM, TEM and their antibacterial effects were evaluated through growth inhibition MIC and MBC methods. The results showed narrow size range, spherical shape, high anti-oxidant, antibacterial and DNA cleavage activities of green synthesized silver nanoparticles comparing to less average size, wider range of nanoparticle size, no anti-oxidant activity and less antibacterial and DNA cleavage activities of chemically synthesized nanoparticles. The green synthesized silver nanoparticles had more desirable characteristics and biological activities compared to chemically synthesized nanoparticles. For instance, the green nanoparticles showed narrow size range, spherical shape, high anti-oxidant, antibacterial and DNA cleavage activities versus the chemically synthesized which had less average size, higher range of nanoparticles size, no anti-oxidant activity and less antibacterial and DNA cleavage activities.

Enhanced Photocatalytic Efficiency of a Least Active Ag-TiO2 by Amine Adsorption

An Ag-TiO2 photocatalyst with 3.5 atom % silver content, synthesized by a single step sol-gel method, possessed silver nanoparticles (AgNPs; 1-5 nm) on the TiO2 surface, but owing to the nonplasmonic nature of AgNPs and the wide band gap of TiO2, this material exhibited poor activity in a photocatalytic degradation reaction. However, this least active Ag-TiO2 catalyst showed a sudden increase in activity during a photocatalytic amine self-coupling reaction showing the highest activity, which was interpreted as amine (reactant) adsorption-driven activity enhancement. We found that amine adsorption occurred over AgNPs converting into plasmonic AgNPs as well as on the TiO2 surface reducing the band gap and therefore facilitated the visible light excitation and the electron-transfer process efficiently, resulting into overall enhancement in the photocatalytic activity. Thus, a very efficient, stable, and visible light active photocatalyst (amine-adsorbed Ag-TiO2) was developed by simply adsorbing an amine in the least active Ag-TiO2 photocatalyst.

NAP enzyme recruitment in simultaneous bioremediation and nanoparticles synthesis

•

This study employed the immobilized strain MMT and its NAP enzyme in concurrent denitrification and NPs synthesis.

•

The properties of crude NAP enzyme were assessed at different ranges of pH and temperatures and also its stability at 4 °C and 30 °C was studied.

•

The effect of several types of additives were evaluated at concentration rang (1 mM, 2.5 mM, 5 mM and 10 mM).

•

Concurrently, the immobilized MMT cells completely removed NO₃⁻ upon 8th day with AgNPs synthesis ranging from 23.26 to 58.14.

•

Immobilized NAP exhibited lower efficiency with 28.6% of NO₃ elimination and large aggregated AgNPs ranging from 94.44 nm to 172.22 nm.

The periplasmic nitrate reductase enzyme (NAP) has become attractive catalyst, whose exploitation has emerged as one of the indispensable strategies toward environmentally benign applications. To achieve them efficiently and overcome the sensitivity of NAP in harsh environmental circumstances, the immobilization for denitrifying bacteria and NAP enzyme for simultaneous bioremediation and bionanoparticles synthesis was studied. NAP catalyzed NO₃⁻ reduction at V_max of 0.811 μM/min and K_m of 14.02 mM. Concurrently, the immobilized MMT cells completely removed NO₃- upon 192 h with AgNPs synthesis ranging from 23.26 to 58.14 nm as indicated by SEM. Wherase, immobilized NAP exhibited lower efficiency with 28.6% of NO₃⁻ elimination within 288 h and large aggregated AgNPs ranging from 94.44 nm to 172.22 nm. To the best of author knowledge, the immobilization for denitrifying bacteria and NAP enzyme for simultaneous bioremediation and bionanoparticles synthesis was not studied before.

A mineralized cell-based functional platform: construction of yeast cells with biogenetic intracellular hydroxyapatite nanoscaffolds

A unique mineralized cell-based functional platform with biogenic intracellular hydroxyapatite nanoscaffolds (nHAP@yeasts) has been intelligently constructed using a biomimetic mineralization approach. Such a platform not only preserves the nature and functions of cells but also possesses intracellular nanoscaffolds, which endow the mineralized cells with novel functions in biological and nanotechnological applications. Benefiting from their unique organism shell and inorganic core, the nHAP@yeasts are biocompatible and have a large loading capacity for drugs. Such anaerobic microorganisms could be beneficial as drug carriers for the effective delivery and release of loaded drugs in tumors because they prefer to locate and grow in reduced oxygen surroundings. A functional investigation indicated that the nHAP@yeasts, functionalized with folic acid (nHAP@yeasts-FA) as cell-based carriers, showed dual responsive release profiles based on the FA dependency of tumors and the pH-sensitivity of the HAP nanoparticles, and they significantly inhibited tumor growth while displaying low toxicity. This study for the first time provides a bio-friendly strategy to biosynthesize a mineralized cell-based functional platform with biogenic intracellular nanominerals (carbonate, sulfides, selenides, metals, etc.) for biological and nanotechnological application.

Highly recyclable Ag NPs/alginate composite beads prepared via one-pot encapsulation method for efficient continuous reduction of p-nitrophenol

Recyclable Ag NPs/alginate composite beads, performing well in dynamic catalytic hydrogenation of p-nitrophenol, were prepared via a one-pot encapsulation method.

Silver nanoparticles formation by extracellular polymeric substances (EPS) from electroactive bacteria

Microbial extracellular polymeric substances (EPS) excreted from microorganisms were a complex natural biological polymer mixture of proteins and polysaccharides, which played an important roles in the transport of metals, such as Ag(+). Electroactive bacteria, is an important class of environmental microorganisms, which can use iron or manganese mineral as terminal electron acceptors to generate energy for biosynthesis and cell maintenance. In this work, the EPS extracted of three electroactive bacteria (Shewanella oneidensis, Aeromonas hydrophila, and Pseudomonas putida) were used for reducing Ag(+) and forming silver nanoparticles (AgNPs). Results showed that all the three microbial EPS could reduce Ag(+) to AgNPs. The formed AgNPs were characterized in depth by the UV-visible spectroscopy, X-ray diffraction, X-ray photoelectron spectroscopy, and high-resolution transmission electron microscopy. The main components in the EPS from the three electroactive bacteria were analyzed. The presence of cytochrome c in these EPS was confirmed, and they were found to contribute to the reduction of Ag(+) to AgNPs. The results indicated that the EPS of electroactive bacteria could act as a reductant for AgNPs synthesis and could provide new information to understand the fate of metals and their metal nanoparticles in the natural environments.

Spectral anion sensing and γ-radiation induced magnetic modifications of polyphenol generated Ag-nanoparticles

A fast one step bio-synthesis for in situ preparation of silver nanoparticles is proposed. The method involves reduction of AgNO3 with an aqueous extract of peanut skin, which is a good source of polyphenols. The silver nanoparticles thus synthesized were characterized by transmission electron microscopy (TEM), X-ray diffraction (XRD), UV-Vis absorption spectroscopy, Fourier Transform infrared (FTIR) spectroscopy and magnetic measurements. Effect of low dose γ irradiation during the synthesis was studied and their physico-chemical properties were compared with those produced without irradiation. On the contrary to the diamagnetic behavior of bulk silver, the silver nanoparticles thus prepared show a significant ferromagnetic moment component. Variable time exposure to γ-irradiation results in an exponential decay of ferromagnetic component. A freshly prepared solution of silver nanoparticles shows selective spectral changes towards iodide ions at trace concentration (below 50 μM) among a series of 16 other competing anions. The prepared nanoparticles are therefore suitable for anion sensing application.

Secretion of metal-binding proteins by a newly discovered OsmY homolog in Cupriavidus metallidurans for the biogenic synthesis of metal nanoparticles

A newly discovered OsmY protein homolog of Cupriavidus metallidurans for use in protein secretion and biogenic synthesis of nanoparticles.

Bio-inspired synthesis of metal nanomaterials and applications

This critical review focuses on recent advances in the bio-inspired synthesis of metal nanomaterials (MNMs) using microorganisms, viruses, plants, proteins and DNA molecules as well as their applications in various fields. Prospects in the design of bio-inspired MNMs for novel applications are also discussed.

Cellulase assisted synthesis of nano-silver and gold: Application as immobilization matrix for biocatalysis

In the present study, we report in vitro synthesis of silver and gold nanoparticles (NPs) using cellulase enzyme in a single step reaction. Synthesized nanoparticles were characterized by UV-VIS spectroscopy, Dynamic Light Spectroscopy (DLS), Transmission Electron Microscopy (TEM), Energy-dispersive X-ray Spectroscopy (EDX), X-ray Diffraction (XRD), Circular Dichroism (CD) and Fourier Transform Infrared Spectroscopy (FTIR). UV-visible studies shows absorption band at 415nm and 520nm for silver and gold NPs respectively due to surface plasmon resonance. Sizes of NPs as shown by TEM are 5-25nm for silver and 5-20nm for gold. XRD peaks confirmed about phase purity and crystallinity of silver and gold NPs. FTIR data shows presence of amide I peak on both the NPs. The cellulase assisted synthesized NPs were further exploited as immobilization matrix for cellulase enzyme. Thermal stability analysis reveals that the immobilized cellulase on synthesized NPs retained 77-80% activity as compared to free enzyme. While reusability data suggests immobilized cellulase can be efficiently used up to sixth cycles with minimum loss of enzyme activity. The secondary structural analysis of cellulase enzyme during the synthesis of NPs and also after immobilization of cellulase on these NPs was carried out by CD spectroscopy.

Bacterial surface display of metal binding peptides as whole-cell biocatalysts for 4-nitroaniline reduction

Using recombinant microorganisms expressing metal binding peptides as whole-cell biocatalysts for 4-nitroaniline reduction.