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Mandal D, Chen T, Qu Z, Grimme S, Stephan DW. Reactions of Frustrated Lewis Pairs with Chloro-Diazirines: Cleavage of N=N Double Bonds. Angew Chem Int Ed Engl 2022; 61:e202209241. [PMID: 35830598 PMCID: PMC9543150 DOI: 10.1002/anie.202209241] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Indexed: 01/19/2023]
Abstract
The reactions of FLPs with diazomethanes leads to the rapid loss of N2 . In contrast, in this work, we reported reactions of phosphine/borane FLPs with chlorodiazirines which led to the reduction of the N=N double bond, affording linked phosphinimide/amidoborate zwitterions of the general form R3 PNC(Ar)NR'BX(C6 F5 )2 . A detailed DFT mechanistic study showed that these reactions proceed via FLP addition to the N=N bond, followed by subsequent group transfer reactions to nitrogen and capture of the halide anion.
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Affiliation(s)
- Dipendu Mandal
- Institute of Drug Discovery TechnologyNingbo UniversityNingbo315211, ZhejiangChina
| | - Ting Chen
- Institute of Drug Discovery TechnologyNingbo UniversityNingbo315211, ZhejiangChina
| | - Zheng‐Wang Qu
- Mulliken Center for Theoretical Chemistry, Clausius Institut für Physikalische und Theoretische ChemieRheinische Friedrich-Wilhelms-Universität BonnBeringstrasse 453115BonnGermany
| | - Stefan Grimme
- Mulliken Center for Theoretical Chemistry, Clausius Institut für Physikalische und Theoretische ChemieRheinische Friedrich-Wilhelms-Universität BonnBeringstrasse 453115BonnGermany
| | - Douglas W. Stephan
- Institute of Drug Discovery TechnologyNingbo UniversityNingbo315211, ZhejiangChina
- Department of ChemistryUniversity of Toronto80 St. George StTorontoON M5S3H6Canada
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2
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Mandal D, Chen T, Qu ZW, Grimme S, Stephan DW. <p class="Title1">Reactions of Frustrated Lewis Pairs with Chloro‐Diazirines: Cleavage of N=N Double Bonds<o:p></o:p></p>. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202209241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Dipendu Mandal
- University of Toronto - St George Campus: University of Toronto Chemistry CANADA
| | | | - Zheng-Wang Qu
- University of Bonn: Rheinische Friedrich-Wilhelms-Universitat Bonn Theoretical chemistry GERMANY
| | - Stefan Grimme
- University of Bonn: Rheinische Friedrich-Wilhelms-Universitat Bonn Theoretical chemistry GERMANY
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3
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Abstract
Biocatalytic carbene transfer from diazo compounds is a versatile strategy in asymmetric synthesis. However, the limited pool of stable diazo compounds constrains the variety of accessible products. To overcome this restriction, we have engineered variants of Aeropyrum pernix protoglobin (ApePgb) that use diazirines as carbene precursors. While the enhanced stability of diazirines relative to their diazo isomers enables access to a diverse array of carbenes, they have previously resisted catalytic activation. Our engineered ApePgb variants represent the first example of catalysts for selective carbene transfer from these species at room temperature. The structure of an ApePgb variant, determined by microcrystal electron diffraction (MicroED), reveals that evolution has enhanced access to the heme active site to facilitate this new-to-nature catalysis. Using readily prepared aryl diazirines as model substrates, we demonstrate the application of these highly stable carbene precursors in biocatalytic cyclopropanation, N-H insertion, and Si-H insertion reactions.
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Affiliation(s)
- Nicholas J. Porter
- Division of Chemistry and Chemical Engineering, Division of Biology and Bioengineering, California Institute of Technology, 1200 East California Boulevard, MC 210-41, Pasadena, California 91125, United States
| | - Emma Danelius
- Howard Hughes Medical Institute, University of California Los Angeles, Los Angeles, California 90095, United States
- Department of Biological Chemistry, University of California Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
| | - Tamir Gonen
- Howard Hughes Medical Institute, University of California Los Angeles, Los Angeles, California 90095, United States
- Department of Biological Chemistry, University of California Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
- Department of Physiology, University of California Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
| | - Frances H. Arnold
- Division of Chemistry and Chemical Engineering, Division of Biology and Bioengineering, California Institute of Technology, 1200 East California Boulevard, MC 210-41, Pasadena, California 91125, United States
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4
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Abstract
Herein, we described an efficient method for the construction of highly functionalized diazirines from the carbohydrazide and diazo-substituted hypervalent iodine reagents. Unambiguous transformation has been designed with user applicable and easy practicable conditions. Remarkably, d-glucose, menthol, aspirin, proline, and lithocholic acid were efficiently diazirinated. Furthermore, the method is mild, robust, and highly selective, which successfully converted a variety of aryl, alkyl, benzyl, and heterocyclic hydrazides into the corresponding diazirine derivatives.
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Affiliation(s)
- Monish Arbaz Ansari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi 221 005, India
| | - Ganesh Kumar
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi 221 005, India
| | - Maya Shankar Singh
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi 221 005, India
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5
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Ibert Q, Cauwel M, Glachet T, Tite T, Le Nahenec‐Martel P, Lohier J, Renard P, Franck X, Reboul V, Sabot C. One‐Pot Synthesis of Diazirines and
15
N
2
‐Diazirines from Ketones, Aldehydes and Derivatives: Development and Mechanistic Insight. Adv Synth Catal 2021. [DOI: 10.1002/adsc.202100679] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Quentin Ibert
- Normandie Univ ENSICAEN, UNICAEN, CNRS, LCMT 6 Boulevard du Maréchal Juin 14050 Caen Cedex
| | - Madeleine Cauwel
- Normandie Univ CNRS, UNIROUEN, INSA Rouen, COBRA 76000 Rouen France
| | - Thomas Glachet
- Normandie Univ ENSICAEN, UNICAEN, CNRS, LCMT 6 Boulevard du Maréchal Juin 14050 Caen Cedex
| | - Tony Tite
- Normandie Univ CNRS, UNIROUEN, INSA Rouen, COBRA 76000 Rouen France
| | | | - Jean‐François Lohier
- Normandie Univ ENSICAEN, UNICAEN, CNRS, LCMT 6 Boulevard du Maréchal Juin 14050 Caen Cedex
| | | | - Xavier Franck
- Normandie Univ CNRS, UNIROUEN, INSA Rouen, COBRA 76000 Rouen France
| | - Vincent Reboul
- Normandie Univ ENSICAEN, UNICAEN, CNRS, LCMT 6 Boulevard du Maréchal Juin 14050 Caen Cedex
| | - Cyrille Sabot
- Normandie Univ CNRS, UNIROUEN, INSA Rouen, COBRA 76000 Rouen France
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6
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Zhang Z, He Z, Xie Y, He T, Fu Y, Yu Y, Huang F. Brønsted acid-catalyzed homogeneous O–H and S–H insertion reactions under metal- and ligand-free conditions. Org Chem Front 2021. [DOI: 10.1039/d0qo01401j] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The economical and accessible CF3SO3H successfully catalyzed homogeneous O–H and S–H bond insertion reactions between hydroxyl compounds, thiols and diazo compounds under metal- and ligand-free conditions.
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Affiliation(s)
- Zhipeng Zhang
- School of Food Science and Pharmaceutical Engineering
- Nanjing Normal University
- Nanjing 210023
- P. R. China
- School of Biology and Biological Engineering
| | - Zhiqin He
- School of Food Science and Pharmaceutical Engineering
- Nanjing Normal University
- Nanjing 210023
- P. R. China
| | - Yuxing Xie
- School of Food Science and Pharmaceutical Engineering
- Nanjing Normal University
- Nanjing 210023
- P. R. China
| | - Tiantong He
- School of Pharmaceutical Sciences
- Nanjing Tech University
- Nanjing 211816
- P. R. China
| | - Yaofeng Fu
- School of Pharmaceutical Sciences
- Nanjing Tech University
- Nanjing 211816
- P. R. China
| | - Yang Yu
- School of Environmental Science and Engineering
- Nanjing Tech University
- Nanjing
- China
| | - Fei Huang
- School of Food Science and Pharmaceutical Engineering
- Nanjing Normal University
- Nanjing 210023
- P. R. China
- School of Pharmaceutical Sciences
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7
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Hashimoto M, Hashinoki M, Kurokawa N, Murai Y, Puteri Tachrim Z, Sakihama Y, Suzuki T. Synthesis of (Trifluoromethyldiazirinyl)phenylboronic Acid Derivatives for Photoaffinity Labeling. HETEROCYCLES 2021. [DOI: 10.3987/com-20-s(k)23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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8
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Glachet T, Marzag H, Saraiva Rosa N, Colell JFP, Zhang G, Warren WS, Franck X, Theis T, Reboul V. Iodonitrene in Action: Direct Transformation of Amino Acids into Terminal Diazirines and 15N 2-Diazirines and Their Application as Hyperpolarized Markers. J Am Chem Soc 2019; 141:13689-13696. [PMID: 31373802 DOI: 10.1021/jacs.9b07035] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
A one-pot metal-free conversion of unprotected amino acids to terminal diazirines has been developed using phenyliodonium diacetate (PIDA) and ammonia. This PIDA-mediated transformation occurs via three consecutive reactions and involves an iodonitrene intermediate. This method is tolerant to most functional groups found on the lateral chain of amino acids, it is operationally simple, and it can be scaled up to provide multigram quantities of diazirine. Interestingly, we also demonstrated that this transformation could be applied to dipeptides without racemization. Furthermore, 14N2 and 15N2 isotopomers can be obtained, emphasizing a key trans-imination step when using 15NH3. In addition, we report the first experimental observation of 14N/15N isotopomers directly creating an asymmetric carbon. Finally, the 15N2-diazirine from l-tyrosine was hyperpolarized by a parahydrogen-based method (SABRE-SHEATH), demonstrating the products' utility as hyperpolarized molecular tag.
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Affiliation(s)
- Thomas Glachet
- Normandie Univ , ENSICAEN, UNICAEN, CNRS, LCMT , 14000 Caen , France
| | - Hamid Marzag
- Normandie Univ , ENSICAEN, UNICAEN, CNRS, LCMT , 14000 Caen , France
| | | | - Johannes F P Colell
- Department of Chemistry , Duke University , 124 Science Drive , Durham , North Carolina 27708 , United States
| | - Guannan Zhang
- Department of Chemistry , Duke University , 124 Science Drive , Durham , North Carolina 27708 , United States
| | - Warren S Warren
- Department of Chemistry , Duke University , 124 Science Drive , Durham , North Carolina 27708 , United States
| | - Xavier Franck
- Normandie Univ , CNRS, UNIROUEN, INSA Rouen, COBRA , 76000 Rouen , France
| | - Thomas Theis
- Department of Chemistry , Duke University , 124 Science Drive , Durham , North Carolina 27708 , United States.,Department of Chemistry , North Carolina State University , 2620 Yarbrough Drive , Raleigh , North Carolina 27695 , United States
| | - Vincent Reboul
- Normandie Univ , ENSICAEN, UNICAEN, CNRS, LCMT , 14000 Caen , France
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9
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Ichiishi N, Moore KP, Wassermann AM, Wolkenberg SE, Krska SW. Reducing Limitation in Probe Design: The Development of a Diazirine-Compatible Suzuki-Miyaura Cross Coupling Reaction. ACS Med Chem Lett 2019; 10:56-61. [PMID: 30655947 DOI: 10.1021/acsmedchemlett.8b00403] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2018] [Accepted: 12/06/2018] [Indexed: 12/17/2022] Open
Abstract
Access to high quality photoaffinity probe molecules is often constrained by synthetic limitations related to diazirine installation. A survey of recently published photoaffinity probe syntheses identified the Suzuki-Miyaura (S-M) coupling reaction, ubiquitous in drug discovery, as being underutilized to incorporate diazirines. To test whether advances in modern cross-coupling catalysis might enable efficient S-M couplings tolerant of the diazirine moiety, a fragment-based screening approach was employed. A model S-M coupling reaction was screened under various conditions in the presence of an aromatic diazirine fragment. This screen identified reaction conditions that gave good yields of S-M coupling product while minimally perturbing the diazirine reporter fragment. These conditions were found to be highly scalable and exhibited broad scope when applied to a chemistry informer library of 24 pharmaceutically relevant aryl boron pinacol esters. Furthermore, these conditions were used to synthesize a known diazirine-containing probe molecule with improved synthetic efficiency.
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Affiliation(s)
- Naoko Ichiishi
- Merck & Co., Inc., Discovery Chemistry, HTE and Lead Discovery Capabilities, Kenilworth, New Jersey 07033, United States
| | - Keith P. Moore
- Merck & Co., Inc., Discovery Chemistry, Chemical Biology, West Point, Pennsylvania 19486, United States
| | - Anne Mai Wassermann
- Merck & Co., Inc., Discovery Chemistry, Chemistry Informatics, Boston, Massachusetts 02115, United States
| | - Scott E. Wolkenberg
- Merck & Co., Inc., Discovery Chemistry, Chemical Biology, West Point, Pennsylvania 19486, United States
| | - Shane W. Krska
- Merck & Co., Inc., Discovery Chemistry, HTE and Lead Discovery Capabilities, Kenilworth, New Jersey 07033, United States
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10
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Stephens TC, Pattison G. Transition-Metal-Free Homologative Cross-Coupling of Aldehydes and Ketones with Geminal Bis(boron) Compounds. Org Lett 2017; 19:3498-3501. [DOI: 10.1021/acs.orglett.7b01474] [Citation(s) in RCA: 50] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Thomas C. Stephens
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry, CV4 7AL, U.K
| | - Graham Pattison
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry, CV4 7AL, U.K
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11
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Shakoor SMA, Mandal SK, Sakhuja R. An Articulate Oxidative Transition-Metal-Free Homocoupling of Imidazo Heterocycles through C(sp2
)-C(sp2
) Bond Formation. European J Org Chem 2017. [DOI: 10.1002/ejoc.201700238] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- S. M. Abdul Shakoor
- Department of Chemistry; Birla Institute of Technology & Science; 333031 Pilani Rajasthan India
| | - Sanjay K. Mandal
- Department of Chemical Sciences; Indian Institute of Science Education and Research Mohali; Sector 81, S.A.S. Nagar 140306 Manuali P. O. Punjab India
| | - Rajeev Sakhuja
- Department of Chemistry; Birla Institute of Technology & Science; 333031 Pilani Rajasthan India
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12
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Wang Q, Tang XY, Shi M. Metal-Free Cross-Coupling of Arylboronic Acids and Derivatives with DAST-Type Reagents for Direct Access to Diverse Aromatic Sulfinamides and Sulfonamides. Angew Chem Int Ed Engl 2016; 55:10811-5. [DOI: 10.1002/anie.201605066] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2016] [Revised: 06/21/2016] [Indexed: 12/16/2022]
Affiliation(s)
- Qiang Wang
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals; East China University of Science and Technology; Meilong Road No. 130 Shanghai 200237 China
| | - Xiang-Ying Tang
- State Key Laboratory of Organometallic Chemistry; Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences; 345 Lingling Road Shanghai 200032 China
| | - Min Shi
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals; East China University of Science and Technology; Meilong Road No. 130 Shanghai 200237 China
- State Key Laboratory of Organometallic Chemistry; Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences; 345 Lingling Road Shanghai 200032 China
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13
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Wang Q, Tang XY, Shi M. Metal-Free Cross-Coupling of Arylboronic Acids and Derivatives with DAST-Type Reagents for Direct Access to Diverse Aromatic Sulfinamides and Sulfonamides. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201605066] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Qiang Wang
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals; East China University of Science and Technology; Meilong Road No. 130 Shanghai 200237 China
| | - Xiang-Ying Tang
- State Key Laboratory of Organometallic Chemistry; Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences; 345 Lingling Road Shanghai 200032 China
| | - Min Shi
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals; East China University of Science and Technology; Meilong Road No. 130 Shanghai 200237 China
- State Key Laboratory of Organometallic Chemistry; Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences; 345 Lingling Road Shanghai 200032 China
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