Ex Tenebris Lux: Illuminating Reactive Oxygen and Nitrogen Species with Small Molecule Probes

Reactive oxygen and nitrogen species are small reactive molecules derived from elements in the air─oxygen and nitrogen. They are produced in biological systems to mediate fundamental aspects of cellular signaling but must be very tightly balanced to prevent indiscriminate damage to biological molecules. Small molecule probes can transmute the specific nature of each reactive oxygen and nitrogen species into an observable luminescent signal (or even an acoustic wave) to offer sensitive and selective imaging in living cells and whole animals. This review focuses specifically on small molecule probes for superoxide, hydrogen peroxide, hypochlorite, nitric oxide, and peroxynitrite that provide a luminescent or photoacoustic signal. Important background information on general photophysical phenomena, common probe designs, mechanisms, and imaging modalities will be provided, and then, probes for each analyte will be thoroughly evaluated. A discussion of the successes of the field will be presented, followed by recommendations for improvement and a future outlook of emerging trends. Our objectives are to provide an informative, useful, and thorough field guide to small molecule probes for reactive oxygen and nitrogen species as well as important context to compare the ecosystem of chemistries and molecular scaffolds that has manifested within the field.

Accurate detection depression cell model with a dual-locked fluorescence probe in response to noradrenaline and HClO

Due to the serious harm of depression to human health and quality of life, an accurate diagnosis of depression is warranted. For the complex etiology of depression, a single biomarker diagnostic method often leads to misdiagnosis. As noradrenaline and HClO are closely related to depression, a "dual-locked" fluorescence probe R-NE-HClO for diagnosing of depression through the simultaneous detection of noradrenaline and HClO was designed and synthesized. Fluorescence of R-NE-HClO can only be restored in the presence of both noradrenaline and HClO. The probe demonstrates excellent selectivity for noradrenaline and HClO and low cytotoxicity in cell imaging experiments. It is to be observed that we successfully applied the probe to accurately detect depressed cells which provides a possible tool for diagnosing depression.

Aryl-Phenanthro[9,10-d]imidazole: A Versatile Scaffold for the Design of Optical-Based Sensors

Fluorescent and colorimetric sensors are important tools for investigating the chemical compositions of different matrices, including foods, environmental samples, and water. The high sensitivity, low interference, and low detection limits of these sensors have inspired scientists to investigate this class of sensing molecules for ion and molecule detection. Several examples of fluorescent and colorimetric sensors have been described in the literature; this Review focuses particularly on phenanthro[9,10-d]imidazoles. Different strategies have been developed for obtaining phenanthro[9,10-d]imidazoles, which enable modification of their optical properties upon interaction with specific analytes. These sensing responses usually involve changes in the fluorescence intensity and/or color arising from processes like photoinduced electron transfer, intramolecular charge transfer, intramolecular proton transfer in the excited state, and Förster resonance energy transfer. In this Review, we categorized these sensors into two different groups: those bearing formyl groups and their derivatives and those based on other molecular groups. The different optical responses of phenanthro[9,10-d]imidazole-based sensors upon interaction with specific analytes are discussed.

Multiple heteroatom-doped photoluminescent carbon dots for ratiometric detection of Hg2+ ions in cell imaging and environmental applications

Photoluminescence detection and imaging of Hg²⁺ ions in the biochemical living system are of great importance. In this study, a new photoluminescent probe based on nitrogen (N), sulfur (S), and boron (B) multiple heteroatom co-doped carbon dots (NSB-CDs) is synthesized for the ratiometric detection of Hg²⁺ ions. The prepared NSB-CDs possess good aqueous solubility, excellent pH and ionic stability, excitation dependency, and high quantum yield (QY = 17.6%). The ratiometric photoluminescent sensor NSB-CDs exhibit high selectivity, sensitivity, and interference towards Hg²⁺ ions over other metal ions. After adding Hg²⁺ ions, the emission intensity of the NSB-CDs exhibits a large redshift from 452 to 496 nm (up to 44 nm), corresponding to a notable change from blue to green emission in aqueous solutions. The association constant (K_a), the limit of detection (LOD), and the limit of quantification (LOQ) for NSB-CDs/Hg²⁺ complex are calculated to be 3.6 × 10⁴ M^-1, 3.1 × 10^-9 M, and 10.4 × 10^-9 M, respectively, in the range of 0-30 × 10^-6 M. The live cell bioimaging of HCT-116 cells with NSB-CDs validates the application of multicolor imaging for the detection of Hg²⁺ ions in aqueous media and biological systems. Moreover, the potential use of the NSB-CDs/Hg²⁺ complex for real sample analysis is demonstrated.

A naphthyl thiourea-based effective chemosensor for fluorescence detection of Ag+ and Zn2

A naphthyl thiourea-based effective chemosensor HNC, (E)-2-(2-hydroxy-3-methoxybenzylidene)-N-(naphthalen-1-yl)hydrazine-1-carbothioamide, was synthesized. HNC showed quick responses toward Ag⁺ and Zn²⁺ through marked fluorescence turn-on in different solvent conditions, respectively. Binding proportions of HNC to Ag⁺ and Zn²⁺ were found to be 2:1 and 1:1, respectively. Detection limits of HNC for Ag⁺ and Zn²⁺ were calculated as 3.82 and 0.21 μM. Binding processes of HNC for Ag⁺ and Zn²⁺ were represented using Job's plot, DFT, ¹ H NMR titration, and ESI-MS.

Recent development of synthetic probes for detection of hypochlorous acid/hypochlorite

Hypochlorous acid/hypochlorite (HOCl/OCl^-), as one of the most important reactive oxygen species (ROS), plays an important role in various physiological and pathological processes. Nonproperly located or abnormal concentration of OCl^-, however, is associated with many diseases. Thus, developing the fluorescent probe for detecting OCl^- is of great significance. To this end, in last decade, many fluorescent probes have been developed and applied for detecting HOCl/OCl^- in vitro and in vivo. Despite a great progress has achieved, the development and application of near-infrared fluorescent HOCl/OCl^- probe still have some challenges. For example, highly specific and sensitive NIR fluorescent HOCl/OCl^- probes applied in endogenous OCl^- detection and subcellular organelle bioimaging. In this review, we summarized the representative cases of HOCl/OCl^- probes with properties that mentioned above. The discussion contains design strategies, detection mechanisms, as well as applications in bioimaging.

Luminescent probes for hypochlorous acid in vitro and in vivo

HClO/ClO^- is the most effective antibacterial active oxygen in neutrophils. However, its excessive existence often leads to the destruction of human physiological mechanisms. In recent years, the developed luminescent probes for the detection of HClO/ClO^- are not only conducive to improve the sensitivity and selectivity of HClO/ClO^- detection, but also play a crucial role in understanding the biological functions of HClO/ClO^-. In addition, luminescent probe-based biological imaging for HClO/ClO^- at sub-cellular resolution has become a powerful tool for biopathology and medical diagnostic research. This article reviews a variety of luminescent probes for the detection of HClO/ClO^-in vitro and in vivo with different design principles and mechanisms, including fluorescence, phosphorescence, and chemiluminescence. The photophysical/chemical properties and biological applications of these luminescent probes were outlined. Finally, we summarized the merits and demerits of the developed luminescent probes and discussed their challenges and future development trends. It is hoped that this review can provide some inspiration for the development of luminescent probe-based strategies and to promote the further research of biomedical luminescent probes for HClO/ClO^-.

A benzyl carbazate-based fluorescent chemosensor for detecting Zn2+: Application to zebrafish

A benzyl carbazate-based fluorescent chemosensor BCS was designed and synthesized for detection of Zn²⁺ in aqueous media. BCS displayed a notable fluorescence increase with Zn²⁺. Detection limit (1.12 μM) of BCS for zinc ion was much lower than the standard of World Health Organization. BCS was used to analyze the amounts of Zn²⁺ in water samples. Importantly, sensor BCS could be used to image Zn²⁺ in zebrafish, and a fluorescent test strip of sensor BCS for detecting Zn²⁺ could be useful for practical purpose. Sensing process of Zn²⁺ by BCS was demonstrated by DFT calculations, based on an effect of chelation-enhanced fluorescence.

Rhodols - synthesis, photophysical properties and applications as fluorescent probes

The formal replacement of one dialkylamino group in rhodamines with a hydroxyl group transforms them into rhodols. This apparently minor difference is not as small as one may think; rhodamines belong to the cyanine family whereas rhodols belong to merocyanines. Discovered in the late 19th century, rhodols have only very recently begun to gain momentum in the field of advanced fluorescence imaging. This is in part due to the increased understanding of their photophysical properties, and new methods of synthesis. Rationalization of how the nature and arrangement of polar substituents around the core affect the photophysical properties of rhodols is now possible. The emergence of so-called π-expanded and heteroatom-modified rhodols has also allowed their fluorescence to be bathochromically shifted into regions applicable for biological imaging. This review serves to outline applicable synthetic strategies for the synthesis of rhodols, and to highlight important structure-property relationships. In the first part of this Review, various synthetic methods leading to rhodols are presented, followed by structural considerations and an overview of photophysical properties. The second part of this review is entirely devoted to the applications of rhodols as fluorescent reporters in biological imaging.

A coumarin based highly sensitive fluorescent chemosensor for selective detection of zinc ion

A very effective and highly sensitive fluorescent chemosensor, based on 4-hydroxycoumarin skeleton substituted by benzothiazole moiety was synthesized and investigated for the detection of zinc ion. This chemosensor displays highly selective and sensitive fluorescence enhancement to Zn²⁺ over other metal ions examined in solution and in biological systems. The detection limit for the fluorescent chemosensor 1 toward Zn²⁺ was 3.58 × 10^-8 M. A simple and efficient approach was improved for the synthesis of chemosensor 1 starting from 4-hydroxycoumarin.

A fast-responsive fluorescent probe based on a terpyridine-Zn2+ complex for sensing hypochlorous acid in aqueous solution and its application in real water samples and bioimaging

A simple terpyridine-Zn²⁺ complex was developed as a turn-off fluorescent probe for detection of HClO with a rapid response of 10 seconds.

A highly selective and sensitive fluorescent probe for Cu2+ based on a novel naphthalimide-rhodamine platform and its application in live cell imaging

Copper plays important roles in a variety of fundamental physiological processes. At the cell organelle level, aberrant copper homeostasis in lysosomes can lead to various serious diseases. Herein, a bifluorophore-based, lysosome-targetable Cu²⁺-selective ratiometric fluorescent probe (V) has been synthesized by reasonable design. The probe V shows high selectivity toward Cu²⁺ ions over other cations and exhibits high sensitivity (1.45 nM) for the detection of Cu²⁺ ions. Meanwhile, the probe is cell permeable and suitable for ratiometric visualization of lysosomal Cu²⁺ in the living cell.

A chromogenic and fluorogenic rhodol-based chemosensor for hydrazine detection and its application in live cell bioimaging

A rhodol-based fluorescent probe has been developed as a selective hydrazine chemosensor using levulinate as a recognition site. The rhodol levulinate probe (RL) demonstrated high selectivity and sensitivity toward hydrazine among other molecules. The chromogenic response of RL solution to hydrazine from colorless to pink could be readily observed by the naked eye, while strong fluorescence emission could be monitored upon excitation at 525 nm. The detection process occurred via a ring-opening process of the spirolactone initiated by hydrazinolysis, triggering the fluorescence emission with a 53-fold enhancement. The probe rapidly reacted with hydrazine in aqueous medium with the detection limit of 26 nM (0.83 ppb), lower than the threshold limit value (TLV) of 10 ppb suggested by the U.S. Environmental Protection Agency. Furthermore, RL-impregnated paper strips could detect hydrazine vapor. For biological applicability of RL, its membrane-permeable property led to bioimaging of hydrazine in live HepG2 cells by confocal fluorescence microscopy.

Rhodol Derivatives as Selective Fluorescent Probes for the Detection of HgII Ions and the Bioimaging of Hypochlorous Acid

Two sensors, 1 with a spirolactone group and 2 with a spirolactam group containing a phenyl isothiocyanate moiety, based on rhodol, were designed and synthesized in order to obtain materials with excellent optical properties for the detection of environmentally and biologically important Hg2+ and hypochlorous acid (HClO) ions. The crystal structure of 1 revealed two moieties, a rhodamine-like portion with a spirolactone and a fluorescein-like portion without a spirolactone. In the absence of analyte, 1 produced an optical output with a maximum absorption and emission at 475 and 570 nm, respectively, which was attributed to the fluorescein-like moiety without a spirolactone. In contrast, the rhodamine-like moiety containing a spirolactone was activated by the addition of H+ or Hg2+ ions, and 1 yielded new absorption and emission peaks at 530 and 612 nm, respectively. Further functionalization with a phenyl isothiocyanate group afforded 2, a fluorescent probe for HClO. High selectivity and sensitivity towards the hypochlorite ion were anticipated, owing to the stoichiometric and irreversible formation of a thiosemicarbazide group, which led to dramatic fluorescence responses. With good functionality at physiological pH, probe 2 was successfully used to image HClO in HeLa cells.

An ESIPT based naphthalimide chemosensor for visualizing endogenous ONOO− in living cells

An ESIPT based naphthalimide chemosensor with high sensitivity and selectivity for visualizing endogenous ONOO⁻ in living cells was developed.

Synthesis and bioapplication of a highly selective and sensitive fluorescent probe for HOCl based on a phenothiazine–dicyanoisophorone conjugate with large Stokes shift

A fluorescent probe with a large Stokes shift for monitoring endogenous HOCl in living cells has been prepared.

The dual-luminescence mechanism of the ESIPT chemosensor tetrasubstituted imidazole core compound: a TDDFT study

The dual-luminescence mechanism of the tetrasubstituted imidazole core (TIC) compound was theoretically explored by considering the excited-state intramolecular proton transfer (ESIPT) process in the present study.

Green synthesis of surface-passivated carbon dots from the prickly pear cactus as a fluorescent probe for the dual detection of arsenic(iii) and hypochlorite ions from drinking water

Efforts were made to develop a simple new approach for the green synthesis of surface-passivated carbon dots from edible prickly pear cactus fruit as the carbon source by a one-pot hydrothermal route. Glutathione (GSH) was passivated on the surface of the CDs to form a sensor probe, which exhibited excellent optical properties and water solubility. The prepared sensor was successfully characterized by UV-visible spectrophotometry, fluorescence spectrophotometry, Fourier transform infrared spectroscopy (FT-IR), X-ray diffraction (XRD), scanning electron microscopy (SEM), and transmission electron microscopy (TEM). The simple sensing platform developed by the GSH-CDs was highly sensitive and selective with a “turn-off” fluorescence response for the dual detection of As³⁺ and ClO⁻ ions in drinking water. This sensing system exhibited effective quenching in the presence of As³⁺ and ClO⁻ ions to display the formation of metal complexes and surface interaction with an oxygen functional group. The oxygen-rich GSH-CDs afforded a better selectivity for As³⁺/ClO⁻ ions over other competitive ions. The fluorescence quenching measurement quantified the concentration range as 2–12 nM and 10–90 μM with the lower detection limit of 2.3 nM and 0.016 μM for the detection of As³⁺ and ClO⁻ ions, respectively. Further, we explored the potential applications of this simple, reliable, and cost-effective sensor for the detection of As³⁺/ClO⁻ ions in environmental samples for practical analysis.

Efforts were made to develop a simple new approach for the green synthesis of surface-passivated carbon dots from edible prickly pear cactus fruit as the carbon source by a one-pot hydrothermal route.

Preparation of an Efficient Ratiometric Fluorescent Nanoprobe (m-CDs@[Ru(bpy)3]2+) for Visual and Specific Detection of Hypochlorite on Site and in Living Cells

Hypochlorite (ClO^-) is one of the most important reactive oxygen species (ROS), which plays an important role in sustaining human innate immunity during microbial invasion. Moreover, ClO^- is a powerful oxidizer for water treatment. The safety of drinking water is closely related to its content. Herein, m-phenylenediamine (mPD) is used as a precursor to prepare carbon dots (named m-CDs) with highly fluorescent quantum yield (31.58% in water), and our investigation shows that the strong fluorescent emission of m-CDs can be effectively quenched by ClO^-. Based on these findings, we developed a novel fluorescent nanoprobe (m-CDs) for highly selective detection of ClO^-. The linear range was from 0.05 to 7 μM (R² = 0.998), and the limit of detection (S/N = 3) was as low as 0.012 μM. Moreover, a portable agarose hydrogel solid matrix-based ratiometric fluorescent nanoprobe (m-CDs@[Ru(bpy)₃]²⁺) sensor was subsequently developed for visual on-site detection of ClO^- with the naked eyes under a UV lamp, suggesting its potential in practical application with low cost and excellent performance in water quality monitoring. Additionally, intracellular detection of exogenous ClO^- was demonstrated via ratiometric imaging microscopy.

A rhodol-based fluorescent chemosensor for hydrazine and its application in live cell bioimaging

A rhodol cinnamate fluorescent chemosensor (RC) has been developed for selective detection of hydrazine (N₂H₄). In aqueous medium, the rhodol-based probe exhibited high selectivity for hydrazine among other molecules. The addition of hydrazine triggered a fluorescence emission with 48-fold enhancement based on hydrazinolysis and a subsequent ring-opening process. The chemical probe also displayed a selective colorimetric response toward N₂H₄ from colorless solution to pink, readily observed by the naked eye. The detection limit of RC for hydrazine was calculated to be 300nM (9.6ppb). RC is membrane permeable and was successfully demonstrated to detect hydrazine in live HepG2 cells by confocal fluorescence microscopy.

Highly selective fluorescent and colorimetric chemosensor for detection of Hg2+ ion in aqueous media

A highly efficient and selective fluorescent and colorimetric chemosensor based on naphthothiazole skeleton was synthesized and its colorimetric and fluorescent properties were investigated. The sensor displays a rapid and highly selective colorimetric and fluorescence response toward Hg²⁺ without interference with other metal ions in CH₃CN/H₂O mixture (50/50, v/v). The detection limit for the fluorescent chemosensor S1 toward Hg²⁺ was 3.42×10^-8M.

A mitochondria-targeting ratiometric fluorescent probe for the detection of hypochlorite based on the FRET strategy

A novel mitochondria-targeting ratiometric probe (IRP) for ⁻OCl based on an imidazo[1,5-a]pyridine-rhodamine FRET platform was developed.

A simple, cyanovinylene-based, ratiometric, colorimetric and fluorescent chemodosimeter for the specific and sensitive detection of HClO in living cells

A simple, cyanovinylene-based, ratiometric, colorimetric and fluorescent chemodosimeter was developed to sensitively and selectively monitor HClO in living cells.