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Kubica-Misztal A, Rochowski P, Florek-Wojciechowska M, Kruk D. Dynamics of solid alanine by means of nuclear magnetic resonance relaxometry. J Chem Phys 2018; 146:164501. [PMID: 28456185 DOI: 10.1063/1.4980152] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
1H nuclear magnetic resonance relaxometry was applied to investigate the dynamics of l-alanine in the solid phase (powder). The experimental studies were carried out in a very broad frequency range, covering four orders of magnitude-from 4 kHz to 40 MHz (referring to the 1H resonance frequency) in order to probe motional processes of much different time scales by a single experiment. To get access to the dynamics of different proton groups of alanine, the 1H spin-lattice relaxation measurements were performed for non-deuterated and partially deuterated alanine. The experiments were carried out in the temperature range of 293 K-370 K (non-deuterated alanine) and 318 K-370 K (partially deuterated alanine). As a result of a thorough theoretical analysis of the extensive set of experimental results, three motional processes occurring on different time scales are identified and quantitatively described. The slowest process occurs on a time scale of μs and it is attributed to the collective dynamics of a 3D hydrogen bond network of alanine, while the intermediate, attributed to the dynamics of the NH3 group, corresponds to the range of tenths of ns. The fast process describes the rotation of the CH3 group.
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Affiliation(s)
- A Kubica-Misztal
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, Łojasiewicza 11, 30-348 Kraków, Poland
| | - P Rochowski
- Faculty of Mathematics and Computer Science, University of Warmia and Mazury in Olsztyn, Słoneczna 54, 10-710 Olsztyn, Poland
| | - M Florek-Wojciechowska
- Department of Physics and Biophysics, University of Warmia and Mazury in Olsztyn, Oczapowskiego 4, 10-719 Olsztyn, Poland
| | - D Kruk
- Faculty of Mathematics and Computer Science, University of Warmia and Mazury in Olsztyn, Słoneczna 54, 10-710 Olsztyn, Poland
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Nagel G, Wölfel W, Noack F. Proton Spin Relaxation Dispersion for Some Nematic Homologues of the Liquid Crystal PAA. Isr J Chem 2013. [DOI: 10.1002/ijch.198300054] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Dynamic magnetic resonance of liquid crystal polymers: Molecular organization and macroscopic properties. ADVANCES IN POLYMER SCIENCE 2005. [DOI: 10.1007/3-540-52159-3_5] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register]
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5
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Puchkovska G, Makarekno S, Danchuk V, Kravchuk A. Temperature study of resonance intermolecular interaction in normal long-chain carboxylic acid crystals using IR absorption spectra. J Mol Struct 2005. [DOI: 10.1016/j.molstruc.2005.01.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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6
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Puchkovska G, Danchuk V, Makarenko S, Kravchuk A, Kotelnikova E, Filatov S. Resonance dynamical intermolecular interaction in the crystals of pure and binary mixture n-paraffins. J Mol Struct 2004. [DOI: 10.1016/j.molstruc.2004.02.010] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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7
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Fuhrmann D, Graham AP. Spectroscopy of the conformational disorder in molecular films: Tetracosane and squalane on Pt(111). J Chem Phys 2004; 120:2439-44. [PMID: 15268384 DOI: 10.1063/1.1632892] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The spectroscopic investigation of the molecular vibrations of adsorbed branched and unbranched alkane molecules using helium atom scattering (HAS) provides evidence for the thermal formation of gauche defects in tetracosane (C24H50) monolayers above 200 K. HAS results for the vibration of tetracosane molecules perpendicular to the Pt(111) surface reveal a strong frequency decrease and peak broadening above the transition temperature which can be related to a reduction of the force holding the molecules to the surface. This reduction of the force is interpreted as being due to the thermal formation of gauche defects within the tetracosane molecules.
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Affiliation(s)
- D Fuhrmann
- Department of Physics and Astronomy, University of Columbia-Missouri, Columbia, Missouri 65201, USA.
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Tutoveanu G, Kitchin SJ, Harris KD, Müller J. Molecular motion in solid ammonia trimethylalane. J SOLID STATE CHEM 2003. [DOI: 10.1016/s0022-4596(03)00355-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Puchkovska G, Makarenko S, Danchuk V, Kravchuk A, Baran J, Kotelnikova E, Filatov S. Dynamics of molecules and phase transitions in the crystals of pure and binary mixtures of n-paraffins. J Mol Struct 2002. [DOI: 10.1016/s0022-2860(02)00237-5] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Buchanan GW, McManus G, Jarrell HC. Solid state molecular motion in sucrose octapalmitate as studied by deuterium NMR spectroscopy. Chem Phys Lipids 2000; 104:23-34. [PMID: 10660209 DOI: 10.1016/s0009-3084(99)00114-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Sucrose octapalmitate-d11, d24 and d248 have been synthesized. Using 2H NMR T1 and analyses of the temperature dependence of the lineshapes, a detailed description of the solid state molecular motional modes is presented. Activation energies for methyl and methylene group rotation in the fatty acyl chains have been determined. The sucrose moiety is found to be static on the solid state deuterium NMR timescale.
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Affiliation(s)
- G W Buchanan
- Department of Chemistry, Ottawa-Carleton Chemistry Institute, Carleton University, Ont., Canada.
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Yamakawa H, Matsukawa S, Kurosu H, Kuroki S, Ando I. Diffusional behavior of n alkanes in the rotator phase as studied by pulse field-gradient spin-echo 1H NMR method. J Chem Phys 1999. [DOI: 10.1063/1.480003] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Yamakawa H, Matsukawa S, Kurosu H, Kuroki S, Ando I. A study of the dynamics of n-alkane in the rotator phase by using the pulse-field-gradient spin-echo 1H NMR method. Chem Phys Lett 1998. [DOI: 10.1016/s0009-2614(97)01394-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
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13
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Arteca GA. Dynamic Molecular Shape Analysis of Configurational Transitions Associated with Melting and Premelting of n-Alkane Chains. J Phys Chem B 1997. [DOI: 10.1021/jp9621538] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Gustavo A. Arteca
- Département de Chimie et Biochimie, Laurentian University, Ramsey Lake Road, Sudbury, Ontario, Canada P3E 2C6
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Stewart MJ, Jarrett WL, Mathias LJ, Alamo RG, Mandelkern L. Thermally Induced Molecular Motion and Premelting in the Solid State of n-Hexatriacontane. Macromolecules 1996. [DOI: 10.1021/ma950107k] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Zeuner U, Dippel T, Noack F, Müller K, Mayer C, Heaton N, Kothe G. Proton spin‐lattice relaxation dispersion of liquid crystal polymers: Characterization of local and collective motions. J Chem Phys 1992. [DOI: 10.1063/1.462960] [Citation(s) in RCA: 28] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Ueda T, Takeda S, Nakamura N, Chihara H. Molecular Motion and Phase Changes in Long Chain Solid Normal Alkanes as Studied by1H and13C NMR. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1991. [DOI: 10.1246/bcsj.64.1299] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Royaud I, Hendra P, Maddams W, Passingham C, Willis H. Structural changes in even-numbered crystalline paraffins at temperatures below their melting point. J Mol Struct 1990. [DOI: 10.1016/0022-2860(90)80204-w] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Yamamoto T. Monte Carlo simulation of the crystal structure of the rotator phase of n‐paraffins. II. Effects of rotation and translation of the rigid molecules. J Chem Phys 1988. [DOI: 10.1063/1.455079] [Citation(s) in RCA: 54] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Rommel E, Mischker K, Osswald G, Schweikert K, Noack F. A powerful NMR field-cycling device using GTOs and MOSFETs for relaxation dispersion and zero-field studies. ACTA ACUST UNITED AC 1986. [DOI: 10.1016/0022-2364(86)90004-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Meier P, Ohmes E, Kothe G. Multipulse dynamic nuclear magnetic resonance of phospholipid membranes. J Chem Phys 1986. [DOI: 10.1063/1.450931] [Citation(s) in RCA: 87] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Yamamoto T. Monte Carlo simulation of the crystal structure of the rotator phase of n‐paraffins. J Chem Phys 1985. [DOI: 10.1063/1.448891] [Citation(s) in RCA: 29] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Maroncelli M, Strauss HL, Snyder RG. The distribution of conformational disorder in the high‐temperature phases of the crystalline n‐alkanes. J Chem Phys 1985. [DOI: 10.1063/1.448280] [Citation(s) in RCA: 172] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Fukada SI, Ikeda R, Nakamura D. 1H NMR and Differential Scanning Calorimetry Studies on Molecular Motions and Phase Transitions in Butylammonium Bromide. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1984. [DOI: 10.1246/bcsj.57.2802] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Forsman H, Andersson P. Thermal conductivity at high pressure of solid odd‐numbered n‐alkanes ranging from C9H20 to C19H40. J Chem Phys 1984. [DOI: 10.1063/1.447029] [Citation(s) in RCA: 30] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Taylor MG, Kelusky EC, Smith ICP, Casal HL, Cameron DG. A 2H NMR study of the solid‐phase behavior of nonadecane. J Chem Phys 1983. [DOI: 10.1063/1.445379] [Citation(s) in RCA: 37] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Imashiro F, Takegoshi K, Okazawa S, Furukawa J, Terao T, Saika A, Kawamori A. NMR study of molecular motions in perisubstituted naphthalenes. J Chem Phys 1983. [DOI: 10.1063/1.444893] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Doucet J, Denicolo I, Craievich A, Collet A. Evidence of a phase transition in the rotator phase of the odd‐numbered paraffins C23H48 and C25H52. J Chem Phys 1981. [DOI: 10.1063/1.441904] [Citation(s) in RCA: 119] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Doucet J, Denicolo I, Craievich A. X‐ray study of the ‘‘rotator’’ phase of the odd‐numbered paraffins C17H36, C19H40, and C21H44. J Chem Phys 1981. [DOI: 10.1063/1.442185] [Citation(s) in RCA: 185] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Kessaissia Z, Papirer E, Donnet JB. Molecular transitions of alkyl chains grafted onto silicas, observed by gas chromatography. J Colloid Interface Sci 1981. [DOI: 10.1016/0021-9797(81)90067-9] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Höptner W, Von Schütz JU, Wolf HC. Proton spin-relaxation study of the polymerization of diacetylene in a single crystal. ACTA ACUST UNITED AC 1980. [DOI: 10.1002/pol.1980.180180307] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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