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Yanes-Rodríguez R, Prosmiti R. Analysing the stability of He-filled hydrates: how many He atoms fit in the sII crystal? Phys Chem Chem Phys 2024; 26:2519-2528. [PMID: 38170811 DOI: 10.1039/d3cp05410a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2024]
Abstract
Clathrate hydrates have the ability to encapsulate atoms and molecules within their cavities, and thus they could be potentially large storage capacity materials. The present work studies the multiple cage occupancy effects in the recently discovered He@sII crystal. On the basis of previous theoretical and experimental findings, the stability of He(1/1)@sII, He(1/4)@sII and He(2/4)@sII crystals was analysed in terms of structural, mechanical and energetic properties. For this purpose, first-principles DFT/DFT-D computations were performed by using both semi-local and non-local functionals, not only to elucidate which configuration is the most energetically favoured, but also to scrutinize the relevance of the long-range dispersion interactions in these kinds of compounds. We have encountered that dispersion interactions play a fundamental role in describing the underlying interactions, and different tendencies were observed depending on the choice of the functional. We found that PW86PBE-XDM shows the best performance, while the non-local functionals tested here were not able to correctly account for them. The present results reveal that the most stable configuration is the one presenting singly occupied D cages and tetrahedrally occupied H cages (He(1/4)@sII) in line with the experimental observation.
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Affiliation(s)
| | - Rita Prosmiti
- Institute of Fundamental Physics (IFF-CSIC), CSIC, Serrano 123, 28006 Madrid, Spain.
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Schmidt M, Millar J, Roy PN. Path integral simulations of confined parahydrogen molecules within clathrate hydrates: Merging low temperature dynamics with the zero-temperature limit. J Chem Phys 2022; 156:014303. [PMID: 34998330 DOI: 10.1063/5.0076386] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Clathrate hydrates, or cages comprised solely of water molecules, have long been investigated as a clean storage facility for hydrogen molecules. A breakthrough occurred when hydrogen molecules were experimentally placed within a structure-II clathrate hydrate, which sparked much interest to determine their feasibility for energy storage [Mao et al., Science 297, 2247-2249 (2002)]. We use Path Integral Molecular Dynamics (PIMD) and Langevin equation Path Integral Ground State (LePIGS) for finite temperature and zero-temperature studies, respectively, to determine parahydrogen occupancy properties in the small dodecahedral (512) and large hexakaidecahedral (51264) sized cages that comprise the structure-II unit cell. We look at energetic and structural properties of small clusters of hydrogen, treated as point-like particles, confined within each of the different sized clathrates, and treated as rigid, to determine energetic and structural properties in the zero-temperature limit. Our predicted hydrogen occupancy within these two cage sizes is consistent with previous literature values. We then calculate the energies as a function of temperature and merge the low temperature results calculated using finite temperature PIMD with the zero-temperature results using LePIGS, demonstrating that the two methods are compatible.
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Affiliation(s)
- Matthew Schmidt
- Department of Chemistry, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
| | - Jayme Millar
- Department of Chemistry, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
| | - Pierre-Nicholas Roy
- Department of Chemistry, University of Waterloo, Waterloo, Ontario N2L 3G1, Canada
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Felker PM, Lauvergnat D, Scribano Y, Benoit DM, Bačić Z. Intramolecular stretching vibrational states and frequency shifts of (H2)2 confined inside the large cage of clathrate hydrate from an eight-dimensional quantum treatment using small basis sets. J Chem Phys 2019; 151:124311. [DOI: 10.1063/1.5124051] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Peter M. Felker
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569, USA
| | - David Lauvergnat
- Laboratoire de Chimie Physique, UMR-CNRS 8000, Université de Paris-Sud, Orsay F-91405, France
| | - Yohann Scribano
- Laboratoire Univers et Particule de Montpellier, Université de Montpellier, UMR-CNRS 5299, 34095 Montpellier Cedex, France
| | - David M. Benoit
- Department of Physics and Mathematics, E. A. Milne Centre for Astrophysics and G. W. Gray Centre for Advanced Materials, The University of Hull, Cottingham Road, Kingston upon Hull HU6 7RX, United Kingdom
| | - Zlatko Bačić
- Department of Chemistry, New York University, New York, New York 10003, USA
- NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China
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Lauvergnat D, Felker P, Scribano Y, Benoit DM, Bačić Z. H2, HD, and D2in the small cage of structure II clathrate hydrate: Vibrational frequency shifts from fully coupled quantum six-dimensional calculations of the vibration-translation-rotation eigenstates. J Chem Phys 2019; 150:154303. [DOI: 10.1063/1.5090573] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- David Lauvergnat
- Laboratoire de Chimie Physique, UMR-CNRS 8000, Université de Paris-Sud, Orsay F-91405, France
| | - Peter Felker
- Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569, USA
| | - Yohann Scribano
- Laboratoire Univers et Particules de Montpellier, Université de Montpellier, UMR-CNRS 5299, 34095 Montpellier Cedex, France
| | - David M. Benoit
- Department of Physics and Mathematics, E.A. Milne Centre for Astrophysics and G. W. Gray Centre for Advanced Materials, The University of Hull, Cottingham Road, Kingston upon Hull HU6 7RX, United Kingdom
| | - Zlatko Bačić
- Department of Chemistry, New York University, New York, New York 10003, USA
- NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai, 200062, China
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Qu C, Bowman JM. Assessing the Importance of the H 2-H 2O-H 2O Three-Body Interaction on the Vibrational Frequency Shift of H 2 in the sII Clathrate Hydrate and Comparison with Experiment. J Phys Chem A 2019; 123:329-335. [PMID: 30525619 DOI: 10.1021/acs.jpca.8b11675] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The vibrational frequency shift of H2 in the 512 cage of the sII clathrate hydrate with and without surrounding water molecules is reported at 0 K, using diffusion Monte Carlo calculations for the ground and first excited vibrational states of H2. Approximate 1d calculations of the frequency shift are also reported with the H2 at the equilibrium position in the clathrate hydrate. These calculations make use of full-dimensional potential energy surfaces for the H2-H2O 2-body and H2-H2O-H2O 3-body interactions. The inclusion of the 3-body interaction is shown to make roughly a 33% contribution to the frequency shift and to bring the calculated value of -40 ± 4 cm-1 to within just 3 cm-1 of the experimental value at 20 K. This level of agreement with experiment may be somewhat fortuitous; however, the importance of the 3-body interaction is firmly established by these calculations. The frequency shift reported here with 2-body interactions does not agree with a previously reported calculation using just 2-body interactions from a different ab initio potential energy surface and with a different method to obtain the frequency shift. A similar 1d calculation of the frequency shift using that potential is reported and agrees to within roughly 10% of the one previously reported. Therefore, this suggests that the difference between the present calculations and the previous one using just 2-body interactions is mainly due to differences in the potential energy surfaces.
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Affiliation(s)
- Chen Qu
- Cherry L. Emerson Center for Scientifc Computations and Department of Chemistry , Emory University , Atlanta , Georgia 30322 , United States
| | - Joel M Bowman
- Cherry L. Emerson Center for Scientifc Computations and Department of Chemistry , Emory University , Atlanta , Georgia 30322 , United States
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Powers A, Scribano Y, Lauvergnat D, Mebe E, Benoit DM, Bačić Z. The effect of the condensed-phase environment on the vibrational frequency shift of a hydrogen molecule inside clathrate hydrates. J Chem Phys 2018; 148:144304. [DOI: 10.1063/1.5024884] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Anna Powers
- Department of Chemistry, New York University, New York, New York 10003, USA
| | - Yohann Scribano
- Laboratoire Univers et Particules de Montpellier, Université de Montpellier, LUPM-UMR CNRS 5299, 34095 Montpellier Cedex, France
| | - David Lauvergnat
- Laboratoire de Chimie Physique UMR CNRS 8000-Université de Paris-Sud, Orsay F-91405, France
| | - Elsy Mebe
- Laboratoire de Chimie Physique UMR CNRS 8000-Université de Paris-Sud, Orsay F-91405, France
| | - David M. Benoit
- E.A. Milne Centre for Astrophysics & G.W. Gray Centre for Advanced Materials, Chemistry, The University of Hull, Cottingham Road, Kingston upon Hull HU6 7RX, United Kingdom
| | - Zlatko Bačić
- Department of Chemistry, New York University, New York, New York 10003, USA
- NYU-ECNU Center for Computational Chemistry at NYU Shanghai, 3663 Zhongshan Road North, Shanghai 200062, China
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Benoit DM, Lauvergnat D, Scribano Y. Does cage quantum delocalisation influence the translation–rotational bound states of molecular hydrogen in clathrate hydrate? Faraday Discuss 2018; 212:533-546. [DOI: 10.1039/c8fd00087e] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this study, we examine the effect of a flexible description of the clathrate hydrate framework on the translation–rotation (TR) eigenstates of guest molecules such as molecular hydrogen.
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Affiliation(s)
- David M. Benoit
- E.A. Milne Centre for Astrophysics
- G.W. Gray Centre for Advanced Materials, Chemistry
- The University of Hull
- UK
| | - David Lauvergnat
- Laboratoire de Chimie Physique
- CNRS
- Univ. Paris-Sud
- Université Paris-Saclay
- Orsay
| | - Yohann Scribano
- Laboratoire Univers et Particules de Montpellier
- UMR-CNRS 5299
- Université de Montpellier
- 34095 Montpellier Cedex
- France
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Zhao W, Wang L, Bai J, Francisco JS, Zeng XC. Spontaneous formation of one-dimensional hydrogen gas hydrate in carbon nanotubes. J Am Chem Soc 2014; 136:10661-8. [PMID: 24885238 DOI: 10.1021/ja5041539] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We present molecular dynamics simulation evidence of spontaneous formation of quasi-one-dimensional (Q1D) hydrogen gas hydrates within single-walled carbon nanotubes (SW-CNTs) of nanometer-sized diameter (1-1.3 nm) near ambient temperature. Contrary to conventional 3D gas hydrates in which the guest molecules are typically contained in individual and isolated cages in the host lattice, the guest H2 molecules in the Q1D gas hydrates are contained within a 1D nanochannel in which the H2 molecules form a molecule wire. In particular, we show that in the (15,0) zigzag SW-CNT, the hexagonal H2 hydrate tends to form, with one H2 molecule per hexagonal prism, while in the (16,0) zigzag SW-CNT, the heptagonal H2 hydrate tends to form, with one H2 molecule per heptagonal prism. In contrast, in the (17,0) zigzag SW-CNT, the octagonal H2 hydrate can form, with either one H2 or two H2 molecules per pentagonal prism (single or double occupancy). Interestingly, in the hexagonal or heptagonal ice nanotube, the H2 wire is solid-like as the axial diffusion constant is very low (<5 × 10(-10) cm(2)/s), whereas in the octagonal ice nanotube, the H2 wire is liquid-like as its axial diffusion constant is comparable to 10(-5) cm(2)/s.
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Affiliation(s)
- Wenhui Zhao
- Department of Materials Science and Engineering, University of Science and Technology of China , Hefei, Anhui 230026, China
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