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Ni W, Yu Y, Gao X, Han Y, Zhang W, Zhang Z, Xiao W, Hu Q, Zhang Y, Huang H, Li F, Chen M, Han J. Multilocus Distance-Regulated Sensor Array for Recognition of Polyphenols via Machine Learning and Indicator Displacement Assay. Anal Chem 2024; 96:301-308. [PMID: 38102984 DOI: 10.1021/acs.analchem.3c04107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2023]
Abstract
Developing new strategies to construct sensor arrays that can effectively distinguish multiple natural components with similar structures in mixtures is an exceptionally challenging task. Here, we propose a new multilocus distance-modulated indicator displacement assay (IDA) strategy for constructing a sensor array, incorporating machine learning optimization to identify polyphenols. An 8-element array, comprising two fluorophores and their six dynamic covalent complexes (C1-C6) formed by pairing two fluorophores with three distinct distance-regulated quenchers, has been constructed. Polyphenols with diverse spatial arrangements and combinatorial forms compete with the fluorophores by forming pseudocycles with quenchers within the complexes, leading to varying degrees of fluorescence recovery. The array accurately and effectively distinguished four tea polyphenols and 16 tea varieties, thereby demonstrating the broad applicability of the multilocus distance-modulated IDA array in detecting polyhydroxy foods and natural medicines.
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Affiliation(s)
- Weiwei Ni
- State Key Laboratory of Natural Medicines, College of Engineering, China Pharmaceutical University, Nanjing 211109, China
| | - Yang Yu
- School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing 211109, China
| | - Xu Gao
- State Key Laboratory of Natural Medicines, College of Engineering, China Pharmaceutical University, Nanjing 211109, China
| | - Yang Han
- School of Basic Medicine and Clinical Pharmacy, China Pharmaceutical University, Nanjing 211109, China
| | - Wenhui Zhang
- State Key Laboratory of Natural Medicines, College of Engineering, China Pharmaceutical University, Nanjing 211109, China
| | - Zerui Zhang
- State Key Laboratory of Natural Medicines, College of Engineering, China Pharmaceutical University, Nanjing 211109, China
| | - Wenqi Xiao
- State Key Laboratory of Natural Medicines, College of Engineering, China Pharmaceutical University, Nanjing 211109, China
| | - Qin Hu
- Department of Laboratory Medicine, The Second Affiliated Hospital of Chongqing Medical University, Chongqing 400010, China
| | - Yanliang Zhang
- Nanjing Research Center for Infectious Diseases of Integrated Traditional Chinese and Western Medicine, Nanjing Hospital of Chinese Medicine Affiliated to Nanjing University of Chinese Medicine, Nanjing 211109, China
| | - Hui Huang
- State Key Laboratory of Natural Medicines, College of Engineering, China Pharmaceutical University, Nanjing 211109, China
| | - Fei Li
- State Key Laboratory of Natural Medicines, College of Engineering, China Pharmaceutical University, Nanjing 211109, China
| | - Mingqi Chen
- State Key Laboratory of Natural Medicines, College of Engineering, China Pharmaceutical University, Nanjing 211109, China
| | - Jinsong Han
- State Key Laboratory of Natural Medicines, College of Engineering, China Pharmaceutical University, Nanjing 211109, China
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Zhang Q, Xia Y, Song W, Chen C, Wang HY. Rapid characterization of isotopic purity of deuterium-labeled organic compounds and monitoring of hydrogen-deuterium exchange reaction using electrospray ionization-high-resolution mass spectrometry. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2023; 37 Suppl 1:e9453. [PMID: 36479749 DOI: 10.1002/rcm.9453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2022] [Revised: 11/26/2022] [Accepted: 11/30/2022] [Indexed: 06/17/2023]
Abstract
RATIONALE Deuterium-labeled organic compounds, reagents, and drugs are widely used in many scientific research fields. Isotopic purity as the feature parameter of deuterated compounds is of great importance. In this article, we used electrospray ionization with high-resolution mass spectrometry (ESI-HRMS) to study isotopic purity of deuterium-labeled organic compounds based on assigning and distinguishing the corresponding H/D (hydrogen-deuterium) isotopolog ions of deuterated compounds. METHODS We systematically considered the specific requirements of accuracy and resolution of ESI-HRMS when measuring isotopic purity and demonstrated some actual cases using ESI-HRMS and ultraperformance liquid chromatography (UPLC)-HRMS. Meanwhile, ESI-HRMS/MS of deuterated compounds was performed to obtain more information on deuterium-labeled position characterization. RESULTS Two isotopic purity calculation methods based on the relative abundance in ESI-HRMS and UPLC-HRMS of H/D isotopolog ions (D0 -Dn ) were compared, which gave consistent isotopic purity values and were in good agreement with the certified isotopic purity values. We further studied and monitored the H/D exchange reaction of ethyl 3-(4-bromophenyl)-3-oxopropanoate (EBPO) by evaluating the dynamic isotopic purity changes in EBPO-D2 in the H/D exchange reaction in situ. CONCLUSION The isotopic purity characterization methods using ESI-HRMS discussed in this article have some outstanding advantages: rapid, highly sensitive, very low sample consumption (even below nanogram level), and deuterated solvent-free. Thus, this low-impact analytical method requires less time and is cost effective and might have good application potential for in-situ isotopic purity analysis and for monitoring the H/D exchange reactions.
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Affiliation(s)
- Qian Zhang
- School of Materials and Chemistry, University of Shanghai for Science and Technology, Shanghai, People's Republic of China
- Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, People's Republic of China
| | - Yaoyu Xia
- School of Materials and Chemistry, University of Shanghai for Science and Technology, Shanghai, People's Republic of China
- Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, People's Republic of China
| | - Wei Song
- Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, People's Republic of China
| | - Chunguang Chen
- School of Materials and Chemistry, University of Shanghai for Science and Technology, Shanghai, People's Republic of China
| | - Hao-Yang Wang
- Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, People's Republic of China
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Simultaneously Verifying the Original Region of Green and Roasted Coffee Beans by Stable Isotopes and Elements Combined with Random Forest. J FOOD QUALITY 2022. [DOI: 10.1155/2022/1308645] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Simultaneously verifying the original region of green and roasted coffee beans is very important for protecting legal interests of the stakeholder according to the chemical analyzing method. 131 green coffee bean samples are collected from six different original regions and pretreated with three degrees (green, middle, and dark roasted); five stable isotope ratios (δ13C, δ14N, δ18O, δ2H, and δ32S) and twelve elemental contents (Al, Cr, Ni, Zn, Ba, Cu, Na, Mn, Fe, Ca, K, and Mg) of green, middle, and dark roasted coffee bean samples (131×3) were analyzed. Fractionation of stable isotopes and variation of elemental contents were evaluated, only isotope hydrogen (2H) significantly fractionated, and elemental concentrations increased with a certain rate during the roasting process. One-way analysis of variance (ANOVA) was used to compare the stable isotope ratios and elemental concentrations of all coffee bean samples from six different original regions. Random forest (RF) was employed to build a discriminating model for simultaneously verifying the original regions of green and roasted coffee bean samples; this model provided 100% accuracy. Inclusion of this mathematical model for simultaneously verifying the original region of green and roasted coffee beans had powerful distinguishing capability and which will not be influenced by fractionation of hydrogen (2H) and variation of element contents during the roasted process.
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Lu Z, Hai C, Yan S, Xu L, Lu D, Sou Y, Chen H, Yang X, Fu H, Yang J. Chemistry Combining Elemental Profile, Stable Isotopic Ratios, and Chemometrics for Fine Classification of a Chinese Herb Licorice ( Glycyrrhiza uralensis Fisch.) from 37 Producing Area. JOURNAL OF ANALYTICAL METHODS IN CHEMISTRY 2022; 2022:8906305. [PMID: 36032189 PMCID: PMC9410990 DOI: 10.1155/2022/8906305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/09/2022] [Accepted: 06/30/2022] [Indexed: 06/15/2023]
Abstract
A method based on elemental fingerprint, stable isotopic analysis and combined with chemometrics was proposed to trace the geographical origins of Licorice (Glycyrrhiza uralensis Fisch) from 37 producing areas. For elemental fingerprint, the levels of 15 elements, including Ca, Cu, Mg, Pb, Zn, Sr, Mn, Se, Cd, Fe, Na, Al, Cr, Co, and K, were analyzed by inductively coupled plasma atomic emission spectrometry (ICP-AES). Three stable isotopes, including δ 13C, δ 15N, and δ 18O, were measured using an isotope-ratio mass spectrometer (IRMS). For fine classification, three multiclass strategies, including the traditional one-versus-rest (OVR) and one-versus-one (OVO) strategies and a new ensemble strategy (ES), were combined with two binary classifiers, partial least squares discriminant analysis (PLSDA) and least squares support vector machines (LS-SVM). As a result, ES-PLSDA and ES-LS-SVM achieved 0.929 and 0.921 classification accuracy of GUF samples from the 37 origins. The results show that element fingerprint and stable isotope combined with chemometrics is an effective method for GUF traceability and provides a new idea for the geographical traceability of Chinese herbal medicine.
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Affiliation(s)
- Zhongying Lu
- Department of Food Engineering, Guizhou Vocational College of Foodstuff Engineering, Guiyang 551400, China
| | - Chengying Hai
- The Modernization Engineering Technology Research Center of Ethnic Minority Medicine of Hubei Province, College of Pharmacy, South-Central Minzu University, Wuhan 430074, China
| | - Simin Yan
- Shanghai Institute of Quality Inspection and Technical Research, Shanghai 201114, China
| | - Lu Xu
- College of Material and Chemical Engineering, Tongren University, Tongren 554300, Guizhou, China
| | - Daowang Lu
- College of Material and Chemical Engineering, Tongren University, Tongren 554300, Guizhou, China
| | - Yixin Sou
- The Modernization Engineering Technology Research Center of Ethnic Minority Medicine of Hubei Province, College of Pharmacy, South-Central Minzu University, Wuhan 430074, China
| | - Hengye Chen
- The Modernization Engineering Technology Research Center of Ethnic Minority Medicine of Hubei Province, College of Pharmacy, South-Central Minzu University, Wuhan 430074, China
| | - Xiaolong Yang
- The Modernization Engineering Technology Research Center of Ethnic Minority Medicine of Hubei Province, College of Pharmacy, South-Central Minzu University, Wuhan 430074, China
| | - Haiyan Fu
- The Modernization Engineering Technology Research Center of Ethnic Minority Medicine of Hubei Province, College of Pharmacy, South-Central Minzu University, Wuhan 430074, China
| | - Jian Yang
- State Key Laboratory Breeding Base of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijng 100700, China
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Multi-Mineral Element Profiles in Genuine and “Bathing” Cultured Chinese Mitten Crabs (Eriocheir sinensis) in Yangcheng Lake, China. FISHES 2022. [DOI: 10.3390/fishes7010011] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
The authentication of high-quality fishery products originating from specific geographical regions is urgently needed worldwide. Chinese mitten crabs (Eriocheir sinensis), originating from Yangcheng Lake, are prime counterfeiting targets for the same reasons. Foreign crabs that are cultured briefly in the lake, known as “bathed” crabs, are illegally marketed as natives, negatively impacting the product quality. To establish a method for distinguishing “bathed” and genuine crabs, in this paper we conduct a comparative investigation by an Agilent 7500ce ICP-MS on multi-mineral element profiling of the third pereiopod from genuine and one month deliberately “bathing” cultured crabs. The profiles of 11 elements were significantly different between the genuine and foreign crabs before and after bathing. The discriminant analysis reached 100% accuracy to separate the genuine and “bathed” crabs into different groups. Bathing culture was unable to converge element profiles between the genuine and foreign crabs. The biogeochemical profiles can be effective for distinguishing “bathed” crabs.
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Global situation of reference materials to assure coffee, cocoa, and tea quality and safety. Trends Analyt Chem 2021. [DOI: 10.1016/j.trac.2021.116381] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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Xu S, Zhao C, Deng X, Zhang R, Qu L, Wang M, Ren S, Wu H, Yue Z, Niu B. Determining the geographical origin of milk by multivariate analysis based on stable isotope ratios, elements and fatty acids. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2021; 13:2537-2548. [PMID: 34013914 DOI: 10.1039/d1ay00339a] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
To construct a reliable discrimination model for determining milk geographical origin, stable isotope ratios including δ13C, δ15N and δ18O, 51 elements and 35 fatty acids (FAs) in milk samples from Australia, New Zealand and Austria were detected and analyzed. It is found that all of the stable isotope ratios in the milk samples of Australia are the highest, followed by those of the samples from New Zealand and Austria. In addition, 14 elements and 8 FAs show different contents in the samples of different countries at the significance level of P < 0.05. Based on these results, a multivariate model with good robustness and predictive ability for authenticating milk origin (R2X = 0.693, Q2 = 0.854) was successfully constructed. Element contents and stable isotope ratios are more reliable variables for milk origin discrimination and Rb, δ18O, Tl, Ba, Mo, Sr, δ15N, Cs, As, Eu, C20:4n6, Sc, C13:0, K, Ca and C16:1n7 are the critical markers in the multivariate model for verifying milk origin.
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Affiliation(s)
- Siyan Xu
- School of Life Sciences, Shanghai University, Shanghai 200444, China
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