1
|
Hillis SL, Chakraborty DP, Orton CG. ROC or FROC? It depends on the research question. Med Phys 2017; 44:1603-1606. [PMID: 28168710 DOI: 10.1002/mp.12151] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2017] [Accepted: 02/02/2017] [Indexed: 11/07/2022] Open
Affiliation(s)
- Stephen L Hillis
- Departments of Radiology and Biostatistics, The University of Iowa, Iowa City, Iowa, 52242-1077, USA
| | - Dev P Chakraborty
- ExpertCAD Analytics, LLC, 2103 Noble Court, Murrysville, Pennsylvania, 15668, USA
| | | |
Collapse
|
2
|
Chakraborty DP, Zhai X. On the meaning of the weighted alternative free-response operating characteristic figure of merit. Med Phys 2017; 43:2548. [PMID: 27147365 DOI: 10.1118/1.4947125] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023] Open
Abstract
PURPOSE The free-response receiver operating characteristic (FROC) method is being increasingly used to evaluate observer performance in search tasks. Data analysis requires definition of a figure of merit (FOM) quantifying performance. While a number of FOMs have been proposed, the recommended one, namely, the weighted alternative FROC (wAFROC) FOM, is not well understood. The aim of this work is to clarify the meaning of this FOM by relating it to the empirical area under a proposed wAFROC curve. METHODS The weighted wAFROC FOM is defined in terms of a quasi-Wilcoxon statistic that involves weights, coding the clinical importance, assigned to each lesion. A new wAFROC curve is proposed, the y-axis of which incorporates the weights, giving more credit for marking clinically important lesions, while the x-axis is identical to that of the AFROC curve. An expression is derived relating the area under the empirical wAFROC curve to the wAFROC FOM. Examples are presented with small numbers of cases showing how AFROC and wAFROC curves are affected by correct and incorrect decisions and how the corresponding FOMs credit or penalize these decisions. The wAFROC, AFROC, and inferred ROC FOMs were applied to three clinical data sets involving multiple reader FROC interpretations in different modalities. RESULTS It is shown analytically that the area under the empirical wAFROC curve equals the wAFROC FOM. This theorem is the FROC analog of a well-known theorem developed in 1975 for ROC analysis, which gave meaning to a Wilcoxon statistic based ROC FOM. A similar equivalence applies between the area under the empirical AFROC curve and the AFROC FOM. The examples show explicitly that the wAFROC FOM gives equal importance to all diseased cases, regardless of the number of lesions, a desirable statistical property not shared by the AFROC FOM. Applications to the clinical data sets show that the wAFROC FOM yields results comparable to that using the AFROC FOM. CONCLUSIONS The equivalence theorem gives meaning to the weighted AFROC FOM, namely, it is identical to the empirical area under weighted AFROC curve.
Collapse
Affiliation(s)
- Dev P Chakraborty
- Department of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania 15668
| | - Xuetong Zhai
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15668
| |
Collapse
|
3
|
A brief history of free-response receiver operating characteristic paradigm data analysis. Acad Radiol 2013; 20:915-9. [PMID: 23583665 DOI: 10.1016/j.acra.2013.03.001] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2013] [Revised: 03/01/2013] [Accepted: 03/07/2013] [Indexed: 11/23/2022]
Abstract
In the receiver operating characteristic paradigm the observer assigns a single rating to each image and the location of the perceived abnormality, if any, is ignored. In the free-response receiver operating characteristic paradigm the observer is free to mark and rate as many suspicious regions as are considered clinically reportable. Credit for a correct localization is given only if a mark is sufficiently close to an actual lesion; otherwise, the observer's mark is scored as a location-level false positive. Until fairly recently there existed no accepted method for analyzing the resulting relatively unstructured data containing random numbers of mark-rating pairs per image. This report reviews the history of work in this field, which has now spanned more than five decades. It introduces terminology used to describe the paradigm, proposed measures of performance (figures of merit), ways of visualizing the data (operating characteristics), and software for analyzing free-response receiver operating characteristic studies.
Collapse
|
4
|
Zanca F, Hillis SL, Claus F, Van Ongeval C, Celis V, Provoost V, Yoon HJ, Bosmans H. Correlation of free-response and receiver-operating-characteristic area-under-the-curve estimates: results from independently conducted FROC∕ROC studies in mammography. Med Phys 2012; 39:5917-29. [PMID: 23039631 DOI: 10.1118/1.4747262] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023] Open
Abstract
PURPOSE From independently conducted free-response receiver operating characteristic (FROC) and receiver operating characteristic (ROC) experiments, to study fixed-reader associations between three estimators: the area under the alternative FROC (AFROC) curve computed from FROC data, the area under the ROC curve computed from FROC highest rating data, and the area under the ROC curve computed from confidence-of-disease ratings. METHODS Two hundred mammograms, 100 of which were abnormal, were processed by two image-processing algorithms and interpreted by four radiologists under the FROC paradigm. From the FROC data, inferred-ROC data were derived, using the highest rating assumption. Eighteen months afterwards, the images were interpreted by the same radiologists under the conventional ROC paradigm; conventional-ROC data (in contrast to inferred-ROC data) were obtained. FROC and ROC (inferred, conventional) data were analyzed using the nonparametric area-under-the-curve (AUC), (AFROC and ROC curve, respectively). Pearson correlation was used to quantify the degree of association between the modality-specific AUC indices and standard errors were computed using the bootstrap-after-bootstrap method. The magnitude of the correlations was assessed by comparison with computed Obuchowski-Rockette fixed reader correlations. RESULTS Average Pearson correlations (with 95% confidence intervals in square brackets) were: Corr(FROC, inferred ROC) = 0.76[0.64, 0.84] > Corr(inferred ROC, conventional ROC) = 0.40[0.18, 0.58] > Corr (FROC, conventional ROC) = 0.32[0.16, 0.46]. CONCLUSIONS Correlation between FROC and inferred-ROC data AUC estimates was high. Correlation between inferred- and conventional-ROC AUC was similar to the correlation between two modalities for a single reader using one estimation method, suggesting that the highest rating assumption might be questionable.
Collapse
Affiliation(s)
- Federica Zanca
- Department of Radiology, University Hospitals Leuven, Leuven, Belgium. @ac.be
| | | | | | | | | | | | | | | |
Collapse
|
5
|
Chakraborty DP, Yoon HJ, Mello-Thoms C. Application of threshold-bias independent analysis to eye-tracking and FROC data. Acad Radiol 2012; 19:1474-83. [PMID: 23040503 PMCID: PMC3489965 DOI: 10.1016/j.acra.2012.09.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2012] [Revised: 09/08/2012] [Accepted: 09/08/2012] [Indexed: 10/27/2022]
Abstract
RATIONALE AND OBJECTIVES Studies of medical image interpretation have focused on either assessing radiologists' performance using, for example, the receiver operating characteristic (ROC) paradigm, or assessing the interpretive process by analyzing their eye-tracking (ET) data. Analysis of ET data has not benefited from threshold-bias independent figures of merit (FOMs) analogous to the area under the receiver operating characteristic (ROC) curve. The aim was to demonstrate the feasibility of such FOMs and to measure the agreement between FOMs derived from free-response ROC (FROC) and ET data. METHODS Eight expert breast radiologists interpreted a case set of 120 two-view mammograms while eye-position data and FROC data were continuously collected during the interpretation interval. Regions that attract prolonged (>800 ms) visual attention were considered to be virtual marks, and ratings based on the dwell and approach-rate (inverse of time-to-hit) were assigned to them. The virtual ratings were used to define threshold-bias independent FOMs in a manner analogous to the area under the trapezoidal alternative FROC (AFROC) curve (0 = worst, 1 = best). Agreement at the case level (0.5 = chance, 1 = perfect) was measured using the jackknife and 95% confidence intervals (CI) for the FOMs and agreement were estimated using the bootstrap. RESULTS The AFROC mark-ratings' FOM was largest at 0.734 (CI 0.65-0.81) followed by the dwell at 0.460 (0.34-0.59) and then by the approach-rate FOM 0.336 (0.25-0.46). The differences between the FROC mark-ratings' FOM and the perceptual FOMs were significant (P < .05). All pairwise agreements were significantly better then chance: ratings vs. dwell 0.707 (0.63-0.88), dwell vs. approach-rate 0.703 (0.60-0.79) and rating vs. approach-rate 0.606 (0.53-0.68). The ratings vs. approach-rate agreement was significantly smaller than the dwell vs. approach-rate agreement (P = .008). CONCLUSIONS Leveraging current methods developed for analyzing observer performance data could complement current ways of analyzing ET data and lead to new insights.
Collapse
Affiliation(s)
- Dev P. Chakraborty
- Department of Radiology, University of Pittsburgh, Presbyterian South Tower, Room 4771, 200 Lothrop Street, Pittsburgh, PA 15213, 412-605-1553 (p), 412-605-1554 (f), 412-605-1553 (phone), 412-605-1554 (fax)
| | - Hong-Jun Yoon
- Department of Radiology, University of Pittsburgh, Presbyterian South Tower, Room 4771, 200 Lothrop Street, Pittsburgh, PA 15213, 412-605-1553 (p), 412-605-1554 (f), 412-605-1553 (phone), 412-605-1554 (fax)
| | - Claudia Mello-Thoms
- University of Pittsburgh School of Medicine, Department of Biomedical Informatics and Department of Radiology, The Offices at Baum, 5th floor, Room 516, 5607 Baum Blvd, Pittsburgh, PA 15206-3701, Phone: (412) 648–9314
| |
Collapse
|
6
|
Abstract
A common task in medical imaging is assessing whether a new imaging system, or a variant of an existing one, is an improvement over an existing imaging technology. Imaging systems are generally quite complex, consisting of several components-for example, image acquisition hardware, image processing and display hardware and software, and image interpretation by radiologists- each of which can affect performance. Although it may appear odd to include the radiologist as a "component" of the imaging chain, because the radiologist's decision determines subsequent patient care, the effect of the human interpretation has to be included. Physical measurements such as modulation transfer function, signal-to-noise ratio, are useful for characterizing the nonhuman parts of the imaging chain under idealized and often unrealistic conditions, such as uniform background phantoms and target objects with sharp edges. Measuring the performance of the entire imaging chain, including the radiologist, and using real clinical images requires different methods that fall under the rubric of observer performance methods or "ROC" analysis, that involve collecting rating data on images. The purpose of this work is to review recent developments in this field, particularly with respect to the free-response method, where location information is also collected.
Collapse
Affiliation(s)
- Dev P Chakraborty
- Department of Radiology, University of Pittsburgh, Pittsburgh, PA 15213, USA.
| |
Collapse
|
7
|
Popescu LM. Nonparametric signal detectability evaluation using an exponential transformation of the FROC curve. Med Phys 2011; 38:5690-702. [PMID: 21992384 DOI: 10.1118/1.3633938] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE To develop an efficient nonparametric method for evaluation the detectability of signals at unknown locations in images, as a mean for image quality assessment. METHODS We use the free-response methodology that allows the image observer to mark and score all locations found as suspicious in an image, summarizing these results in a free-response operating characteristic (FROC) curve. However, unlike the relative (or receiver) operating characteristic (ROC), or the localization ROC (LROC), the FROC curve has an undefined, theoretically infinite, right side limit. Therefore area under the FROC curves cannot be directly used as an overall performance index, as the area under the curve is for ROC or LROC. We circumvent this drawback by using a transformation of the abscissa that leads to a finite integration range. By applying an exponential transformation we derive a nonparametric estimator for such a metric, and we study its properties by deriving analytical expressions for the mean and standard deviation in conditions of scores independence. RESULTS A comparative study with other related nonparametric estimators for ROC, LROC, and alternative FROC (AFROC) method is presented. CONCLUSIONS The new nonparametric estimator has sensitivity and scalability properties that make it particularly advantageous for signal detectability evaluation in phantom experiments using model observers.
Collapse
Affiliation(s)
- Lucretiu M Popescu
- Food and Drug Administration Center for Devices and Radiological Health, Silver Spring, MD 20993, USA.
| |
Collapse
|
8
|
Chakraborty DP. Recent developments in imaging system assessment methodology, FROC analysis and the search model. NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH. SECTION A, ACCELERATORS, SPECTROMETERS, DETECTORS AND ASSOCIATED EQUIPMENT 2011; 648 Supplement 1:S297-S301. [PMID: 21804679 PMCID: PMC3144765 DOI: 10.1016/j.nima.2010.11.042] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
A frequent problem in imaging is assessing whether a new imaging system is an improvement over an existing standard. Observer performance methods, in particular the receiver operating characteristic (ROC) paradigm, are widely used in this context. In ROC analysis lesion location information is not used and consequently scoring ambiguities can arise in tasks, such as nodule detection, involving finding localized lesions. This paper reviews progress in the free-response ROC (FROC) paradigm in which the observer marks and rates suspicious regions and the location information is used to determine whether lesions were correctly localized. Reviewed are FROC data analysis, a search-model for simulating FROC data, predictions of the model and a method for estimating the parameters. The search model parameters are physically meaningful quantities that can guide system optimization.
Collapse
|
9
|
Andriole KP, Wolfe JM, Khorasani R, Treves ST, Getty DJ, Jacobson FL, Steigner ML, Pan JJ, Sitek A, Seltzer SE. Optimizing analysis, visualization, and navigation of large image data sets: one 5000-section CT scan can ruin your whole day. Radiology 2011; 259:346-62. [PMID: 21502391 DOI: 10.1148/radiol.11091276] [Citation(s) in RCA: 69] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
UNLABELLED The technology revolution in image acquisition, instrumentation, and methods has resulted in vast data sets that far outstrip the human observers' ability to view, digest, and interpret modern medical images by using traditional methods. This may require a paradigm shift in the radiologic interpretation process. As human observers, radiologists must search for, detect, and interpret targets. Potential interventions should be based on an understanding of human perceptual and attentional abilities and limitations. New technologies and tools already in use in other fields can be adapted to the health care environment to improve medical image analysis, visualization, and navigation through large data sets. This historical psychophysical and technical review touches on a broad range of disciplines but focuses mainly on the analysis, visualization, and navigation of image data performed during the interpretive process. Advanced postprocessing, including three-dimensional image display, multimodality image fusion, quantitative measures, and incorporation of innovative human-machine interfaces, will likely be the future. Successful new paradigms will integrate image and nonimage data, incorporate workflow considerations, and be informed by evidence-based practices. This overview is meant to heighten the awareness of the complexities and limitations of how radiologists interact with images, particularly the large image sets generated today. Also addressed is how human-machine interface and informatics technologies could combine to transform the interpretation process in the future to achieve safer and better quality care for patients and a more efficient and effective work environment for radiologists. SUPPLEMENTAL MATERIAL http://radiology.rsna.org/lookup/suppl/doi:10.1148/radiol.11091276/-/DC1.
Collapse
Affiliation(s)
- Katherine P Andriole
- Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Brigham Circle, 1620 Tremont St, Boston, MA 02120-1613, USA
| | | | | | | | | | | | | | | | | | | |
Collapse
|
10
|
Zarb F, Rainford L, McEntee MF. Image quality assessment tools for optimization of CT images. Radiography (Lond) 2010. [DOI: 10.1016/j.radi.2009.10.002] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
|
11
|
Abstract
The purpose of this paper is to summarise recent progress in free-response receiver operating characteristic (FROC) methodology. These are: (1) jackknife alternative FROC analysis including recent extensions and alternative methods; (2) the search-model simulator that enables validation and objective comparison of different methods of analysing the data; (3) case-based analysis that has the potential of greater clinical relevance than conventional free-response analysis; (4) a method for collectively analysing the multiple lesion types in an image (e.g. microcalcifications, masses and architectural distortions); (5) a method for sample-size estimation for FROC studies; and (6) a method for determining an objective proximity criterion, namely how close must a mark be to a true lesion in order to credit the observer for a true localisation. FROC analysis is being increasingly used to evaluate the imaging systems and understanding of recent progress should help researchers conduct better FROC studies.
Collapse
Affiliation(s)
- D P Chakraborty
- Department of Radiology, University of Pittsburgh, Pittsburgh, PA, USA.
| |
Collapse
|
12
|
Chakraborty DP. Clinical relevance of the ROC and free-response paradigms for comparing imaging system efficacies. RADIATION PROTECTION DOSIMETRY 2010; 139:37-41. [PMID: 20139268 PMCID: PMC2868120 DOI: 10.1093/rpd/ncq017] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Observer performance studies are widely used to assess medical imaging systems. Unlike technical/engineering measurements observer performance include the entire imaging chain and the radiologist. However, the widely used receiver operating characteristic (ROC) method ignores lesion localisation information. The free-response ROC (FROC) method uses the location information to appropriately reward or penalise correct or incorrect localisations, respectively. This paper describes a method for improving the clinical relevance of FROC studies. The method consists of assigning appropriate risk values to the different lesions that may be present on a single image. A high-risk lesion is one that is critical to detect and act upon, and is assigned a higher risk value than a low-risk lesion, one that is relatively innocuous. Instead of simply counting the number of lesions that are detected, as is done in conventional FROC analysis, a risk-weighted count is used. This has the advantage of rewarding detections of high-risk lesions commensurately more than detections of lower risk lesions. Simulations were used to demonstrate that the new method, termed case-based analysis, results in a higher figure of merit for an expert who detects more high-risk lesions than a naive observer who detects more low-risk lesions, even though both detect the same total number of lesions. Conventional free-response analysis is unable to distinguish between the two types of observers. This paper also comments on the issue of clinical relevance of ROC analysis vs. FROC for tasks that involve lesion localisation.
Collapse
|
13
|
Obuchowski NA, Mazzone PJ, Dachman AH. Bias, underestimation of risk, and loss of statistical power in patient-level analyses of lesion detection. Eur Radiol 2009; 20:584-94. [PMID: 19763582 DOI: 10.1007/s00330-009-1590-4] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2009] [Revised: 07/15/2009] [Accepted: 07/27/2009] [Indexed: 11/28/2022]
Abstract
PURPOSE Sensitivity and the false positive rate are usually defined with the patient as the unit of observation, i.e., the diagnostic test detects or does not detect disease in a patient. For tests designed to find and diagnose lesions, e.g., lung nodules, the usual definitions of sensitivity and specificity may be misleading. In this paper we describe and compare five measures of accuracy of lesion detection. METHODS The five levels of evaluation considered were patient level without localization, patient level with localization, region of interest (ROI) level without localization, ROI level with localization, and lesion level. RESULTS We found that estimators of sensitivity that do not require the reader to correctly locate the lesion overstate sensitivity. Patient-level estimators of sensitivity can be misleading when there is more than one lesion per patient and they reduce study power. Patient-level estimators of the false positive rate can conceal important differences between techniques. Referring clinicians rely on a test's reported accuracy to both choose the appropriate test and plan management for their patients. If reported sensitivity is overstated, the clinician could choose the test for disease screening, and have false confidence that a negative test represents the true absence of lesions. Similarly, the lower false positive rate associated with patient-level estimators can mislead clinicians about the diagnostic value of the test and consequently that a positive finding is real. CONCLUSION We present clear recommendations for studies assessing and comparing the accuracy of tests tasked with the detection and interpretation of lesions...
Collapse
Affiliation(s)
- Nancy A Obuchowski
- Department of Quantitative Health Sciences/JJN3 and the Imaging Institute, Cleveland Clinic Foundation, 9500 Euclid Ave, Cleveland, OH 44195, USA.
| | | | | |
Collapse
|
14
|
Popescu LM. Model for the detection of signals in images with multiple suspicious locations. Med Phys 2009; 35:5565-74. [PMID: 19175114 DOI: 10.1118/1.3002413] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
A signal detection model is presented that combines a signal model and a noise model providing mathematical descriptions of the frequency of appearance of the signals, and of the signal-like features naturally occurring in the background. We derive expressions for the likelihood functions for the whole ensemble of observed suspicious locations, in various possible combinations of signals and false signal candidates. As a result, this formalism is able to describe several new types of detection tests using likelihood ratio statistics. We have a global image abnormality test and an individual signal detection test. The model also provides an alternative mechanism in which is selected the combination of signal and noise features candidates that has the maximum likelihood. These tests can be analyzed with a variety of operating characteristic curves (ROC, LROC, FROC, etc.). In the mathematical formalism of the model, all the details characterizing the suspicious features are reduced to a single scalar function, which we name the signal specificity function, representing the frequency that a signal takes a certain value relative to the frequency of having a false signal with the same value in an image of given size. The signal specificity function ranks the degree of suspiciousness of the features found, and can be used to unify into a single score all the suspicious feature characteristics, and then apply the usual decision conventions as in the Swensson's detection model [Med. Phys. 23, 1709-1725 (1996)]. We present several examples in which these tests are compared. We also show how the signal specificity function can be used to model various degrees of accuracy of the observer's knowledge about image noise and signal statistical properties. Aspects concerning modeling of the human observer are also discussed.
Collapse
Affiliation(s)
- Lucreţiu M Popescu
- Department of Radiology, University of Pennsylvania, Philadelphia, Pennsylvania 19104-6021, USA.
| |
Collapse
|
15
|
Chakraborty DP. Validation and statistical power comparison of methods for analyzing free-response observer performance studies. Acad Radiol 2008; 15:1554-66. [PMID: 19000872 DOI: 10.1016/j.acra.2008.07.018] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2008] [Revised: 07/16/2008] [Accepted: 07/17/2008] [Indexed: 11/26/2022]
Abstract
RATIONALE AND OBJECTIVES The aim of this work was to validate and compare the statistical powers of proposed methods for analyzing free-response data using a search-model-based simulator. MATERIALS AND METHODS A free-response data simulator is described that can model a single reader interpreting the same cases in two modalities, or two computer-aided detection (CAD) algorithms, or two human observers, interpreting the same cases in one modality. A variance components model, analogous to the Roe and Metz receiver-operating characteristic (ROC) data simulator, is described; it models intracase and intermodality correlations in free-response studies. Two generic observers were simulated: a quasi-human observer and a quasi-CAD algorithm. Null hypothesis (NH) validity and statistical powers of ROC, jackknife alternative free-response operating characteristic (JAFROC), a variant of JAFROC termed JAFROC-1, initial detection and candidate analysis (IDCA), and a nonparametric (NP) approach were investigated. RESULTS All methods had valid NH behavior over a wide range of simulator parameters. For equal numbers of normal and abnormal cases, for the human observer, the statistical power ranking of the methods was JAFROC-1 > JAFROC > (IDCA approximately NP) > ROC. For the CAD algorithm, the ranking was (NP approximately IDCA) > (JAFROC-1 approximately JAFROC) > ROC. In either case, the statistical power of the highest ranked method exceeded that of the lowest ranked method by about a factor of two. Dependence of statistical power on simulator parameters followed expected trends. For data sets with more abnormal cases than normal cases, JAFROC-1 power significantly exceeded JAFROC power. CONCLUSION Based on this work, the recommendation is to use JAFROC-1 for human observers (including human observers with CAD assist) and the NP method for evaluating CAD algorithms.
Collapse
|
16
|
Performance assessments of diagnostic systems under the FROC paradigm: experimental, analytical, and results interpretation issues. Acad Radiol 2008; 15:1312-5. [PMID: 18790403 DOI: 10.1016/j.acra.2008.05.006] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2008] [Revised: 05/22/2008] [Accepted: 04/29/2008] [Indexed: 11/22/2022]
Abstract
As use of free response receiver-operating characteristic (FROC) curves gains more acceptance for quantitatively assessing the performance of diagnostic systems, it is important that the experimentalist understands the possible role of this approach as one of the experimental design paradigms that are available to him or her among all other approaches as well as some of the issues associated with FROC type studies. In a number of experimental scenarios, the FROC paradigm and associated analytical tools have theoretical and practical advantages over both the binary and the ROC approaches to performance assessments of diagnostic systems, but it also has some limitations related to experimental design, data analyses, clinical relevance, and complexity in the interpretation of the results. These issues are rarely discussed and are the focus of this work.
Collapse
|
17
|
Song T, Bandos AI, Rockette HE, Gur D. On comparing methods for discriminating between actually negative and actually positive subjects with FROC type data. Med Phys 2008; 35:1547-58. [PMID: 18491549 DOI: 10.1118/1.2890410] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
The task of searching and detecting multiple abnormalities depicted on an image, or a series of images, is a common problem in different areas such as military target detection or diagnostic medical imaging. A free response receiver operating characteristic (FROC) approach for assessing performance in many of these scenarios entails marking the locations of suspected abnormalities and indicating a level of suspicion at each of the marked locations. One of the important characteristics of a system being evaluated under the FROC paradigm is its performance in the conventional ROC domain, namely classifying a subject (or a unit of interest) as "negative" or "positive" in regard to the presence of the abnormality (or any of the abnormalities) of interest. With FROC data we can compare subjects by specifying a function of multiple scores within a subject. This approach allows formulating subject-based ROC type indices that can be estimated using existing ROC concepts. In this article we focus on indices that reflect the ability of the system to discriminate between actually negative and actually positive subjects. We consider a previously proposed index that is based on the comparison of the highest scores on subjects and two new indices that are based on potentially more stable comparison functions, namely comparison of average scores and stochastic dominance. Based on these indices we develop nonparametric procedures for comparing subject-based discriminative ability of diagnostic systems being evaluated under the FROC paradigm. We also investigate the properties of the statistical procedures in a simulation study.
Collapse
Affiliation(s)
- Tao Song
- Department of Biostatistics, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, USA
| | | | | | | |
Collapse
|
18
|
Chakraborty DP, Yoon HJ. Operating characteristics predicted by models for diagnostic tasks involving lesion localization. Med Phys 2008; 35:435-45. [PMID: 18383663 DOI: 10.1118/1.2820902] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
In 1996 Swensson published an observer model that predicted receiver operating characteristic (ROC), localization ROC (LROC), free-response ROC (FROC) and alternative FROC (AFROC) curves, thereby achieving "unification" of different observer performance paradigms. More recently a model termed initial detection and candidate analysis (IDCA) has been proposed for fitting computer aided detection (CAD) generated FROC data, and recently a search model for human observer FROC data has been proposed. The purpose of this study was to derive IDCA and the search model based expressions for operating characteristics, and to compare the predictions to the Swensson model. For three out of four mammography CAD data sets all models yielded good fits in the high-confidence region, i.e., near the lower end of the plots. The search model and IDCA tended to better fit the data in the low-confidence region, i.e., near the upper end of the plots, particularly for FROC curves for which the Swensson model predictions departed markedly from the data. For one data set none of the models yielded satisfactory fits. A unique characteristic of search model and IDCA predicted operating characteristics is that the operating point is not allowed to move continuously to the lowest confidence limit of the corresponding Swensson model curves. This prediction is actually observed in the CAD raw data and it is the primary reason for the poor FROC fits of the Swensson model in the low-confidence region.
Collapse
Affiliation(s)
- D P Chakraborty
- Department of Radiology, University of Pittsburgh, 3520 Forbes Avenue, Parkvale Building, Room 109, Pittsburgh, Pennsylvania 15261, USA.
| | | |
Collapse
|
19
|
Abstract
Computer-aided detection (CAD) has been attracting extensive research interest during the last two decades. It is recognized that the full potential of CAD can only be realized by improving the performance and robustness of CAD algorithms and this requires good evaluation methodology that would permit CAD designers to optimize their algorithms. Free-response receiver operating characteristic (FROC) curves are widely used to assess CAD performance, however, evaluation rarely proceeds beyond determination of lesion localization fraction (sensitivity) at an arbitrarily selected value of nonlesion localizations (false marks) per image. This work describes a FROC curve fitting procedure that uses a recent model of visual search that serves as a framework for the free-response task. A maximum likelihood procedure for estimating the parameters of the model from free-response data and fitting CAD generated FROC curves was implemented. Procedures were implemented to estimate two figures of merit and associated statistics such as 95% confidence intervals and goodness of fit. One of the figures of merit does not require the arbitrary specification of an operating point at which to evaluate CAD performance. For comparison a related method termed initial detection and candidate analysis was also implemented that is applicable when all suspicious regions are reported. The two methods were tested on seven mammography CAD data sets and both yielded good to excellent fits. The search model approach has the advantage that it can potentially be applied to radiologist generated free-response data where not all suspicious regions are reported, only the ones that are deemed sufficiently suspicious to warrant clinical follow-up. This work represents the first practical application of the search model to an important evaluation problem in diagnostic radiology. Software based on this work is expected to benefit CAD developers working in diverse areas of medical imaging.
Collapse
Affiliation(s)
- Hong Jun Yoon
- Department of Radiology, University of Pittsburgh, Pittsburgh, PA 15261
| | - Bin Zheng
- Department of Radiology, University of Pittsburgh, Pittsburgh, PA 15261
| | - Berkman Sahiner
- Department of Radiology, University of Michigan, Ann Arbor, MI 48109
| | | |
Collapse
|
20
|
Wagner RF, Metz CE, Campbell G. Assessment of medical imaging systems and computer aids: a tutorial review. Acad Radiol 2007; 14:723-48. [PMID: 17502262 DOI: 10.1016/j.acra.2007.03.001] [Citation(s) in RCA: 99] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2007] [Revised: 03/05/2007] [Accepted: 03/06/2007] [Indexed: 11/22/2022]
Abstract
This article reviews the central issues that arise in the assessment of diagnostic imaging and computer-assist modalities. The paradigm of the receiver operating characteristic (ROC) curve--the dependence of the true-positive fraction versus the false-positive fraction as a function of the level of aggressiveness of the reader/radiologist toward a positive call--is essential to this field because diagnostic imaging systems are used in multiple settings, including controlled laboratory studies in which the prevalence of disease is different from that encountered in a study in the field. The basic equation of statistical decision theory is used to display how readers can vary their level of aggressiveness according to this diagnostic context. Most studies of diagnostic modalities in the last 15 years have demonstrated not only a range of levels of reader aggressiveness, but also a range of level of reader performance. These characteristics require a multivariate approach to ROC analysis that accounts for both the variation of case difficulty and the variation of reader skill in a study. The resulting paradigm is called the multiple-reader, multiple-case ROC paradigm. Highlights of historic as well as contemporary work in this field are reviewed. Many practical issues related to study design and resulting statistical power are included, together with recent developments and availability of analytical software.
Collapse
Affiliation(s)
- Robert F Wagner
- Office of Science and Engineering Laboratories, Center for Devices & Radiological Health, Food and Drug Administration, Rockville, MD 20850, USA.
| | | | | |
Collapse
|
21
|
Abstract
When a person or an algorithm searches for targets throughout an image, there are no discrete trials, and the probability of a false alarm cannot be computed. Instead, what is observable is the rate of production of false alarms (per image, say), and data analysis uses the free-response version of signal detection theory. A previously-proposed model implies a power relationship for the free-response operating characteristic. The present letter introduces an extra parameter. The relationship between the logarithms of probability of correct detection and rate of false alarm production is no longer forced to be linear.
Collapse
|
22
|
Chakraborty D, Yoon HJ, Mello-Thoms C. Spatial localization accuracy of radiologists in free-response studies: Inferring perceptual FROC curves from mark-rating data. Acad Radiol 2007; 14:4-18. [PMID: 17178361 PMCID: PMC1829298 DOI: 10.1016/j.acra.2006.10.015] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2006] [Revised: 10/24/2006] [Accepted: 10/26/2006] [Indexed: 11/25/2022]
Abstract
RATIONALE AND OBJECTIVES Free-response data consist of a set of mark-ratings pairs. Before analysis, the data are classified or "scored" into lesion and non-lesion localizations. The scoring is done by choosing an acceptance-radius and classifying marks within the acceptance-radius of lesion centers as lesion localizations, and all other marks are classified as non-lesion localizations. The scored data are plotted as a free-response receiver operating characteristic (FROC) curve, essentially a plot of appropriately normalized numbers of lesion localizations vs. non-lesion localizations. Scored FROC curves are frequently used to compare imaging systems and computer-aided detection (CAD) algorithms. However, the choice of acceptance-radius is arbitrary. This makes it difficult to compare curves from different studies and to estimate true performance. MATERIALS AND METHODS To resolve this issue the concept of two types of marks is introduced: perceptual hits and perceptual misses. A perceptual hit is a mark made in response to the observer seeing the lesion. A perceptual miss is a mark made in response to the observer seeing a (lesion-like) non-lesion. A method of estimating the most probable numbers of perceptual hits and misses is described. This allows one to plot a perceptual FROC operating point and by extension a perceptual FROC curve. Unlike a scored FROC operating point, a perceptual point is independent of the choice of acceptance-radius. The method does not allow one to identify individual marks as perceptual hits or misses-only the most probable numbers. It is based on a three-parameter statistical model of the spatial distributions of perceptual hits and misses relative to lesion centers. RESULTS The method has been applied to an observer dataset in which mammographers and residents with different levels of experience were asked to locate lesions in mammograms. The perceptual operating points suggest superior performance for the mammographers and equivalent performance for residents in the first and second mammography rotations. These results and the model validation are preliminary as they are based on a small dataset. CONCLUSION The significance of this study is showing that it is possible to probabilistically determine if a mark resulted from seeing a lesion or a non-lesion. Using the method developed in this study one could perform acceptance-radius independent estimation of observer performance.
Collapse
Affiliation(s)
- Dev Chakraborty
- Department of Radiology, University of Pittsburgh, 3520 5th Avenue, Suite 300, Pittsburgh, PA 15261, USA.
| | | | | |
Collapse
|
23
|
Popescu LM, Lewitt RM. Small nodule detectability evaluation using a generalized scan-statistic model. Phys Med Biol 2006; 51:6225-44. [PMID: 17110782 DOI: 10.1088/0031-9155/51/23/020] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
In this paper is investigated the use of the scan statistic for evaluating the detectability of small nodules in medical images. The scan-statistic method is often used in applications in which random fields must be searched for abnormal local features. Several results of the detection with localization theory are reviewed and a generalization is presented using the noise nodule distribution obtained by scanning arbitrary areas. One benefit of the noise nodule model is that it enables determination of the scan-statistic distribution by using only a few image samples in a way suitable both for simulation and experimental setups. Also, based on the noise nodule model, the case of multiple targets per image is addressed and an image abnormality test using the likelihood ratio and an alternative test using multiple decision thresholds are derived. The results obtained reveal that in the case of low contrast nodules or multiple nodules the usual test strategy based on a single decision threshold underperforms compared with the alternative tests. That is a consequence of the fact that not only the contrast or the size, but also the number of suspicious nodules is a clue indicating the image abnormality. In the case of the likelihood ratio test, the multiple clues are unified in a single decision variable. Other tests that process multiple clues differently do not necessarily produce a unique ROC curve, as shown in examples using a test involving two decision thresholds. We present examples with two-dimensional time-of-flight (TOF) and non-TOF PET image sets analysed using the scan statistic for different search areas, as well as the fixed position observer.
Collapse
Affiliation(s)
- Lucreţiu M Popescu
- Department of Radiology, University of Pennsylvania, 423 Guardian Drive, 4th floor Blockley Hall, Philadelphia, PA 19104-6021, USA.
| | | |
Collapse
|
24
|
Chakraborty DP. A search model and figure of merit for observer data acquired according to the free-response paradigm. Phys Med Biol 2006; 51:3449-62. [PMID: 16825742 PMCID: PMC2230665 DOI: 10.1088/0031-9155/51/14/012] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Search is a basic activity that is performed routinely in many different tasks. In the context of medical imaging it involves locating lesions in images under conditions of uncertainty regarding the number and locations of lesions that may be present. A search model is presented that applies to situations, as in the free-response paradigm, where on each image the number of normal regions that could be mistaken for lesions is unknown, and the number of observer generated localizations of suspicious regions (marks) is unpredictable. The search model is based on a two-stage model that has been proposed in the literature, according to which, at the first stage (the preattentive stage) the observer uses mainly peripheral vision to identify likely lesion candidates, and at the second stage the observer decides (i.e., cognitively evaluates) whether or not to report the candidates. The search model regards the unpredictable numbers of lesion and non-lesion localizations as random variables and models them via appropriate statistical distributions. The model has three parameters quantifying the lesion signal-to-noise ratio, the observer's expertise at rejecting non-lesion locations, and the observer's expertise at finding lesions. A figure-of-merit quantifying the observer's search performance is described. The search model bears a close resemblance to the initial detection and candidate analysis (IDCA) model that has been recently proposed for analysing computer aided detection (CAD) algorithms. The ability to analytically model and quantify the search process would enable more powerful assessment and optimization of performance in these activities, which could be highly significant.
Collapse
Affiliation(s)
- D P Chakraborty
- Department of Radiology, University of Pittsburgh, 3520 5th Avenue, Suite 300, Pittsburgh, PA 15261, USA.
| |
Collapse
|