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Shang K, Xiao L, Zhang X, Zang L, Zhao D, Wang C, Wang X, Zhou T, Zhu C, Zhu X. Tomato chlorosis virus p22 interacts with NbBAG5 to inhibit autophagy and regulate virus infection. MOLECULAR PLANT PATHOLOGY 2023; 24:425-435. [PMID: 36828802 PMCID: PMC10098061 DOI: 10.1111/mpp.13311] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Revised: 01/28/2023] [Accepted: 01/31/2023] [Indexed: 05/03/2023]
Abstract
Tomato chlorosis virus (ToCV) is a member of the genus Crinivirus in the family Closteroviridae. It has a wide host range and wide distribution, causing serious harm to the vegetable industry. The autophagy pathway plays an important role in plant resistance to virus infection. Viruses and plant hosts coevolve in defence and antidefence processes around autophagy. In this study, the interaction between ToCV p22 and Nicotiana benthamiana B-cell lymphoma2-associated athanogenes5 Nicotiana benthamiana (NbBAG5) was examined. Through overexpression and down-regulation of NbBAG5, results showed that NbBAG5 could negatively regulate ToCV infection. NbBAG5 was found to be localized in mitochondria and can change the original localization of ToCV p22, which is colocalized in mitochondria. NbBAG5 inhibited the expression of mitophagy-related genes and the number of autophagosomes, thereby regulating viral infection by affecting mitophagy. In summary, this study demonstrated that ToCV p22 affects autophagy by interacting with NbBAG5, established the association between viral infection, BAG proteins family, and the autophagy pathway, and explained the molecular mechanism by which ToCV p22 interacts with NbBAG5 to inhibit autophagy to regulate viral infection.
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Affiliation(s)
- Kaijie Shang
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
- State Key Laboratory of Crop BiologyCollege of Life Sciences, Shandong Agricultural UniversityTaiʼanChina
| | - Li Xiao
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
| | - Xianping Zhang
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
| | - Lianyi Zang
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
| | - Dan Zhao
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
| | - Chenchen Wang
- State Key Laboratory of Crop BiologyCollege of Life Sciences, Shandong Agricultural UniversityTaiʼanChina
| | - Xipan Wang
- State Key Laboratory of Crop BiologyCollege of Life Sciences, Shandong Agricultural UniversityTaiʼanChina
| | - Tao Zhou
- State Key Laboratory for Agro‐Biotechnology, and Ministry of Agriculture and Rural Affairs, Key Laboratory for Pest Monitoring and Green Management, Department of Plant PathologyChina Agricultural UniversityBeijingChina
| | - Changxiang Zhu
- State Key Laboratory of Crop BiologyCollege of Life Sciences, Shandong Agricultural UniversityTaiʼanChina
| | - Xiaoping Zhu
- College of Plant ProtectionShandong Agricultural UniversityTaiʼanChina
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2
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Jiang H, Liu X, Xiao P, Wang Y, Xie Q, Wu X, Ding H. Functional insights of plant bcl-2-associated ahanogene (BAG) proteins: Multi-taskers in diverse cellular signal transduction pathways. FRONTIERS IN PLANT SCIENCE 2023; 14:1136873. [PMID: 37056491 PMCID: PMC10086319 DOI: 10.3389/fpls.2023.1136873] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Accepted: 03/06/2023] [Indexed: 06/19/2023]
Abstract
Bcl-2-associated athanogene (BAG) gene family is a highly conserved molecular chaperone cofactor in evolution from yeast to humans and plants playing important roles in a variety of signal pathways. Plant BAG proteins have special structures, especially those containing CaM-binding IQ motifs which are unique to plants. While early studies focused more on the structure and physiological function of plant BAGs, recent studies have revealed many novel functional mechanisms involved in multiple cellular processes. How to achieve signal specificity has become an interesting topic of plant BAG research. In this review, we have provided a historic view of plant BAG research and summarized recent advances in the establishment of BAG as essential components in normal plant growth, environmental stress response, and plant immunity. Based on the relationship between BAG proteins and their newly interacting proteins, this review highlights the functional mechanisms of various cellular signals mediated by plant BAGs. Future work needs to focus on the post-translational modification of BAG proteins, and on understanding how specificity is achieved among BAG signaling pathways.
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Affiliation(s)
- Hailong Jiang
- College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, China
| | - Xiaoya Liu
- College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, China
| | - Peixiang Xiao
- College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, China
| | - Yan Wang
- College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, China
| | - Qihui Xie
- College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, China
| | - Xiaoxia Wu
- College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, China
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China, Yangzhou, China
| | - Haidong Ding
- College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, China
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China, Yangzhou, China
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3
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Dash A, Ghag SB. Genome-wide in silico characterization and stress induced expression analysis of BcL-2 associated athanogene (BAG) family in Musa spp. Sci Rep 2022; 12:625. [PMID: 35022483 PMCID: PMC8755836 DOI: 10.1038/s41598-021-04707-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Accepted: 12/21/2021] [Indexed: 11/23/2022] Open
Abstract
Programmed cell death (PCD) is a genetically controlled process for the selective removal of damaged cells. Though understanding about plant PCD has improved over years, the mechanisms are yet to be fully deciphered. Among the several molecular players of PCD in plants, B cell lymphoma 2 (Bcl-2)-associated athanogene (BAG) family of co-chaperones are evolutionary conserved and regulate cell death, growth and development. In this study, we performed a genome-wide in silico analysis of the MusaBAG gene family in a globally important fruit crop banana. Thirteen MusaBAG genes were identified, out of which MusaBAG1, 7 and 8 genes were found to have multiple copies. MusaBAG genes were distributed on seven out of 11 chromosomes in banana. Except for one paralog of MusaBAG8 all the other 12 proteins have characteristic BAG domain. MusaBAG1, 2 and 4 have an additional ubiquitin-like domain whereas MusaBAG5-8 have a calmodulin binding motif. Most of the MusaBAG proteins were predicted to be localized in the nucleus and mitochondria or chloroplast. The in silico cis-regulatory element analysis suggested regulation associated with photoperiodic control, abiotic and biotic stress. The phylogenetic analysis revealed 2 major clusters. Digital gene expression analysis and quantitative real-time RT-PCR depicted the differential expression pattern of MusaBAG genes under abiotic and biotic stress conditions. Further studies are warranted to uncover the role of each of these proteins in growth, PCD and stress responses so as to explore them as candidate genes for engineering transgenic banana plants with improved agronomic traits.
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Affiliation(s)
- Ashutosh Dash
- School of Biological Sciences, UM-DAE Centre for Excellence in Basic Sciences, University of Mumbai Campus, Kalina, Santacruz (East), Mumbai, 400 098, India
| | - Siddhesh B Ghag
- School of Biological Sciences, UM-DAE Centre for Excellence in Basic Sciences, University of Mumbai Campus, Kalina, Santacruz (East), Mumbai, 400 098, India.
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Wan Abdullah WMAN, Saidi NB, Yusof MT, Wee CY, Loh HS, Ong-Abdullah J, Lai KS. Vacuolar Processing Enzymes Modulating Susceptibility Response to Fusarium oxysporum f. sp. cubense Tropical Race 4 Infections in Banana. FRONTIERS IN PLANT SCIENCE 2022; 12:769855. [PMID: 35095950 PMCID: PMC8790485 DOI: 10.3389/fpls.2021.769855] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 12/13/2021] [Indexed: 06/14/2023]
Abstract
Fusarium oxysporum f. sp. cubense tropical race 4 (FocTR4) is a destructive necrotrophic fungal pathogen afflicting global banana production. Infection process involves the activation of programmed cell death (PCD). In this study, seven Musa acuminata vacuolar processing enzyme (MaVPE1-MaVPE7) genes associated with PCD were successfully identified. Phylogenetic analysis and tissue-specific expression categorized these MaVPEs into the seed and vegetative types. FocTR4 infection induced the majority of MaVPE expressions in the susceptible cultivar "Berangan" as compared to the resistant cultivar "Jari Buaya." Consistently, upon FocTR4 infection, high caspase-1 activity was detected in the susceptible cultivar, while low level of caspase-1 activity was recorded in the resistant cultivar. Furthermore, inhibition of MaVPE activities via caspase-1 inhibitor in the susceptible cultivar reduced tonoplast rupture, decreased lesion formation, and enhanced stress tolerance against FocTR4 infection. Additionally, the Arabidopsis VPE-null mutant exhibited higher tolerance to FocTR4 infection, indicated by reduced sporulation rate, low levels of H2O2 content, and high levels of cell viability. Comparative proteomic profiling analysis revealed increase in the abundance of cysteine proteinase in the inoculated susceptible cultivar, as opposed to cysteine proteinase inhibitors in the resistant cultivar. In conclusion, the increase in vacuolar processing enzyme (VPE)-mediated PCD played a crucial role in modulating susceptibility response during compatible interaction, which facilitated FocTR4 colonization in the host.
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Affiliation(s)
| | - Noor Baity Saidi
- Department of Cell and Molecular Biology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Malaysia
| | - Mohd Termizi Yusof
- Department of Microbiology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Malaysia
| | - Chien-Yeong Wee
- Biotechnology and Nanotechnology Research Centre, Malaysian Agricultural Research and Development Institute, Serdang, Malaysia
| | - Hwei-San Loh
- Faculty of Science, School of Biosciences, The University of Nottingham Malaysia Campus, Semenyih, Malaysia
- Biotechnology Research Centre, The University of Nottingham Malaysia Campus, Semenyih, Malaysia
| | - Janna Ong-Abdullah
- Department of Cell and Molecular Biology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, Serdang, Malaysia
| | - Kok-Song Lai
- Health Sciences Division, Abu Dhabi Women’s College, Higher Colleges of Technology, Abu Dhabi, United Arab Emirates
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The Divergent Roles of the Rice bcl-2 Associated Athanogene (BAG) Genes in Plant Development and Environmental Responses. PLANTS 2021; 10:plants10102169. [PMID: 34685978 PMCID: PMC8538510 DOI: 10.3390/plants10102169] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Revised: 09/22/2021] [Accepted: 09/24/2021] [Indexed: 01/01/2023]
Abstract
Bcl-2-associated athanogene (BAG), a group of proteins evolutionarily conserved and functioned as co-chaperones in plants and animals, is involved in various cell activities and diverse physiological processes. However, the biological functions of this gene family in rice are largely unknown. In this study, we identified a total of six BAG members in rice. These genes were classified into two groups, OsBAG1, -2, -3, and -4 are in group I with a conserved ubiquitin-like structure and OsBAG5 and -6 are in group Ⅱ with a calmodulin-binding domain, in addition to a common BAG domain. The BAG genes exhibited diverse expression patterns, with OsBAG4 showing the highest expression level, followed by OsBAG1 and OsBAG3, and OsBAG6 preferentially expressed in the panicle, endosperm, and calli. The co-expression analysis and the hierarchical cluster analysis indicated that the OsBAG1 and OsBAG3 were co-expressed with primary cell wall-biosynthesizing genes, OsBAG4 was co-expressed with phytohormone and transcriptional factors, and OsBAG6 was co-expressed with disease and shock-associated genes. β-glucuronidase (GUS) staining further indicated that OsBAG3 is mainly involved in primary young tissues under both primary and secondary growth. In addition, the expression of the BAG genes under brown planthopper (BPH) feeding, N, P, and K deficiency, heat, drought and plant hormones treatments was investigated. Our results clearly showed that OsBAGs are multifunctional molecules as inferred by their protein structures, subcellular localizations, and expression profiles. BAGs in group I are mainly involved in plant development, whereas BAGs in group II are reactive in gene regulations and stress responses. Our results provide a solid basis for the further elucidation of the biological functions of plant BAG genes.
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He M, Wang Y, Jahan MS, Liu W, Raziq A, Sun J, Shu S, Guo S. Characterization of SlBAG Genes from Solanum lycopersicum and Its Function in Response to Dark-Induced Leaf Senescence. PLANTS 2021; 10:plants10050947. [PMID: 34068645 PMCID: PMC8151600 DOI: 10.3390/plants10050947] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/19/2021] [Revised: 04/29/2021] [Accepted: 05/06/2021] [Indexed: 12/03/2022]
Abstract
The Bcl-2-associated athanogene (BAG) family is a group of evolutionarily conserved cochaperones involved in diverse cellular functions. Here, ten putative SlBAG genes were identified in tomato. SlBAG2 and SlBAG5b have the same gene structure and conserved domains, along with highly similar identity to their homologs in Arabidopsis thaliana, Oryza sativa, and Triticum aestivum. The qPCR data showed that BAG2 and BAG5b were highly expressed in stems and flowers. Moreover, both genes were differentially expressed under diverse abiotic stimuli, including cold stress, heat stress, salt treatment, and UV irradiation, and treatments with phytohormones, namely, ABA, SA, MeJA, and ETH. Subcellular localization showed that SlBAG2 and SlBAG5b were located in the cell membrane and nucleus. To elucidate the functions in leaf senescence of BAG2 and BAG5b, the full-length CDSs of BAG2 and BAG5b were cloned, and transgenic tomatoes were developed. Compared with WT plants, those overexpressing BAG2 and BAG5b had significantly increased chlorophyll contents, chlorophyll fluorescence parameters and photosynthetic rates but obviously decreased ROS levels, chlorophyll degradation and leaf senescence related gene expression under dark stress. Conclusively, overexpression SlBAG2 and SlBAG5b could improve the tolerance of tomato leaves to dark stress and delay leaf senescence.
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Affiliation(s)
- Mingming He
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China; (M.H.); (Y.W.); (M.S.J.); (W.L.); (A.R.); (J.S.); (S.S.)
| | - Yu Wang
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China; (M.H.); (Y.W.); (M.S.J.); (W.L.); (A.R.); (J.S.); (S.S.)
- Suqian Academy of Protected Horticulture, Nanjing Agricultural University, Suqian 223800, China
| | - Mohammad Shah Jahan
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China; (M.H.); (Y.W.); (M.S.J.); (W.L.); (A.R.); (J.S.); (S.S.)
- Department of Horticulture, Sher-e-Bangla Agricultural University, Dhaka 1207, Bangladesh
| | - Weikang Liu
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China; (M.H.); (Y.W.); (M.S.J.); (W.L.); (A.R.); (J.S.); (S.S.)
| | - Abdul Raziq
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China; (M.H.); (Y.W.); (M.S.J.); (W.L.); (A.R.); (J.S.); (S.S.)
| | - Jin Sun
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China; (M.H.); (Y.W.); (M.S.J.); (W.L.); (A.R.); (J.S.); (S.S.)
- Suqian Academy of Protected Horticulture, Nanjing Agricultural University, Suqian 223800, China
| | - Sheng Shu
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China; (M.H.); (Y.W.); (M.S.J.); (W.L.); (A.R.); (J.S.); (S.S.)
- Suqian Academy of Protected Horticulture, Nanjing Agricultural University, Suqian 223800, China
| | - Shirong Guo
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China; (M.H.); (Y.W.); (M.S.J.); (W.L.); (A.R.); (J.S.); (S.S.)
- Suqian Academy of Protected Horticulture, Nanjing Agricultural University, Suqian 223800, China
- Correspondence:
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Rocha ADJ, Soares JMDS, Nascimento FDS, Santos AS, Amorim VBDO, Ferreira CF, Haddad F, dos Santos-Serejo JA, Amorim EP. Improvements in the Resistance of the Banana Species to Fusarium Wilt: A Systematic Review of Methods and Perspectives. J Fungi (Basel) 2021; 7:249. [PMID: 33806239 PMCID: PMC8066237 DOI: 10.3390/jof7040249] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2021] [Revised: 03/11/2021] [Accepted: 03/22/2021] [Indexed: 11/16/2022] Open
Abstract
The fungus Fusarium oxysporum f. sp. cubense (FOC), tropical race 4 (TR4), causes Fusarium wilt of banana, a pandemic that has threatened the cultivation and export trade of this fruit. This article presents the first systematic review of studies conducted in the last 10 years on the resistance of Musa spp. to Fusarium wilt. We evaluated articles deposited in different academic databases, using a standardized search string and predefined inclusion and exclusion criteria. We note that the information on the sequencing of the Musa sp. genome is certainly a source for obtaining resistant cultivars, mainly by evaluating the banana transcriptome data after infection with FOC. We also showed that there are sources of resistance to FOC race 1 (R1) and FOC TR4 in banana germplasms and that these data are the basis for obtaining resistant cultivars, although the published data are still scarce. In contrast, the transgenics approach has been adopted frequently. We propose harmonizing methods and protocols to facilitate the comparison of information obtained in different research centers and efforts based on global cooperation to cope with the disease. Thus, we offer here a contribution that may facilitate and direct research towards the production of banana resistant to FOC.
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Affiliation(s)
- Anelita de Jesus Rocha
- Department of Biological Sciences, State University of Feira de Santana, Feira de Santana 44036-900, Bahia, Brazil; (A.d.J.R.); (J.M.d.S.S.); (F.d.S.N.)
| | - Julianna Matos da Silva Soares
- Department of Biological Sciences, State University of Feira de Santana, Feira de Santana 44036-900, Bahia, Brazil; (A.d.J.R.); (J.M.d.S.S.); (F.d.S.N.)
| | - Fernanda dos Santos Nascimento
- Department of Biological Sciences, State University of Feira de Santana, Feira de Santana 44036-900, Bahia, Brazil; (A.d.J.R.); (J.M.d.S.S.); (F.d.S.N.)
| | | | | | - Claudia Fortes Ferreira
- Embrapa Cassava and Fruit, Cruz das Almas 44380-000, Bahia, Brazil; (V.B.d.O.A.); (C.F.F.); (F.H.); (J.A.d.S.-S.)
| | - Fernando Haddad
- Embrapa Cassava and Fruit, Cruz das Almas 44380-000, Bahia, Brazil; (V.B.d.O.A.); (C.F.F.); (F.H.); (J.A.d.S.-S.)
| | | | - Edson Perito Amorim
- Embrapa Cassava and Fruit, Cruz das Almas 44380-000, Bahia, Brazil; (V.B.d.O.A.); (C.F.F.); (F.H.); (J.A.d.S.-S.)
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Gurdaswani V, Ghag SB, Ganapathi TR. FocSge1 in Fusarium oxysporum f. sp. cubense race 1 is essential for full virulence. BMC Microbiol 2020; 20:255. [PMID: 32795268 PMCID: PMC7427899 DOI: 10.1186/s12866-020-01936-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2020] [Accepted: 08/04/2020] [Indexed: 12/11/2022] Open
Abstract
Background Fusarium wilt disease of banana is one of the most devastating diseases and was responsible for destroying banana plantations in the late nineteenth century. Fusarium oxysporum f. sp. cubense is the causative agent. Presently, both race 1 and 4 strains of Foc are creating havoc in the major banana-growing regions of the world. There is an urgent need to devise strategies to control this disease; that is possible only after a thorough understanding of the molecular basis of this disease. Results There are a few regulators of Foc pathogenicity which are triggered during this infection, among which Sge1 (Six Gene Expression 1) regulates the expression of effector genes. The protein sequence is conserved in both race 1 and 4 strains of Foc indicating that this gene is vital for pathogenesis. The deletion mutant, FocSge1 displayed poor conidial count, loss of hydrophobicity, reduced pigmentation, decrease in fusaric acid production and pathogenicity as compared to the wild-type and genetically complemented strain. Furthermore, the C-terminal domain of FocSge1 protein is crucial for its activity as deletion of this region results in a knockout-like phenotype. Conclusion These results indicated that FocSge1 plays a critical role in normal growth and pathogenicity with the C-terminal domain being crucial for its activity.
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Affiliation(s)
- Vartika Gurdaswani
- School of Biological Sciences, UM-DAE Centre for Excellence in Basic Sciences, University of Mumbai campus, Kalina, Santacruz (E), Mumbai, 400 098, India
| | - Siddhesh B Ghag
- School of Biological Sciences, UM-DAE Centre for Excellence in Basic Sciences, University of Mumbai campus, Kalina, Santacruz (E), Mumbai, 400 098, India.
| | - Thumballi R Ganapathi
- Plant Cell Culture Technology Section, Nuclear Agriculture & Biotechnology Division, Bhabha Atomic Research Centre, Trombay, Mumbai, 400 085, India
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Sunisha C, Sowmya HD, Usharani TR, Umesha M, Gopalkrishna HR, Sriram S. Induction of Ced9 mediated anti-apoptosis in commercial banana cultivar Rasthali for stable resistance against Fusarium wilt. 3 Biotech 2020; 10:371. [PMID: 32832331 DOI: 10.1007/s13205-020-02357-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Accepted: 07/24/2020] [Indexed: 11/30/2022] Open
Abstract
Anti-apoptotic gene Ced-9 enhanced resistance against Fusarium oxysporum f. sp. cubense (Foc) in the susceptible banana cultivar Rasthali by arresting tissue necrosis. The embryogenic cell suspension of banana cultivar Rasthali was stably transformed with Ced-9 gene and transformed lines were regenerated independently. The putative transgenic lines were analyzed with PCR using gene primers and further subjected to Southern blot to estimate copy number. The root-challenge bioassay with Foc showed 17-51% Vascular Discoloration Index in independent transformants compared to untransformed banana cv Rasthali (98% VDI). Four transgenic events showed a higher level of resistance over a period of 6 months. Overcoming tissue necrosis is the most ideal method to avoid Fusarium multiplication and spread in banana. Oxidative stress-induced cell necrosis is prevented by the activation of antiapoptotic pathways by Ced-9 and is proving to be an effective method to control this dreaded disease. This is the first report from India on the generation of transgenic banana cultivar Rasthali expressing antiapoptotic Ced-9 gene for resistance to Fusarium wilt.
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Affiliation(s)
- C Sunisha
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089 India
- Department of Biotechnology and Biochemistry, Centre for Postgraduate Studies, Jain University, Bangalore, India
| | - H D Sowmya
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089 India
| | - T R Usharani
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089 India
| | - M Umesha
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089 India
| | - H R Gopalkrishna
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089 India
| | - S Sriram
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089 India
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10
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Mohamed MA, Abd-Elsalam KA. Nanoparticles and gene silencing for suppression of mycotoxins. NANOMYCOTOXICOLOGY 2020:423-448. [DOI: 10.1016/b978-0-12-817998-7.00018-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
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11
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Sunisha C, Sowmya HD, Usharani TR, Umesha M, Gopalkrishna HR, Saxena A. Deployment of Stacked Antimicrobial Genes in Banana for Stable Tolerance Against Fusarium oxysporum f.sp. cubense Through Genetic Transformation. Mol Biotechnol 2019; 62:8-17. [PMID: 31667713 DOI: 10.1007/s12033-019-00219-w] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Enhanced tolerance to wilt disease (Fusarium oxysporum f.sp. cubense) was achieved in banana variety Rasthali (AAB) by the transformation of embryogenic cells with two antimicrobial genes viz., Ace-AMP1 and pflp using Agrobacterium mediated transformation. The transgene copy numbers in stable transformants were confirmed by Southern analysis. The expression of stacked genes in the transgenic lines was validated by RT-PCR as well as Northern analysis. Bioassay using Foc race 1 in pot culture experiments demonstrated enhanced tolerance after 180 days of planting. Two independent transformants showed 10-20% Vascular Discoloration Index compared to untransformed banana cv. Rasthali (96%). The stacked lines revealed higher activity of Super Oxide Dismutase and Peroxidase compared to untransformed control which depicted higher tolerance to oxidative stress caused by Foc infection.
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Affiliation(s)
- C Sunisha
- Department of Biotechnology and Biochemistry, Centre for Post-Graduate Studies, Jain University, Bangalore, India
| | - H D Sowmya
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089, India
| | - T R Usharani
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089, India.
| | - M Umesha
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089, India
| | - H R Gopalkrishna
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089, India
| | - Arvindkumar Saxena
- Division of Biotechnology, ICAR-Indian Institute of Horticultural Research, Hessaraghatta, Bangalore, 560 089, India
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12
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Transcriptomic analysis of resistant and susceptible banana corms in response to infection by Fusarium oxysporum f. sp. cubense tropical race 4. Sci Rep 2019; 9:8199. [PMID: 31160634 PMCID: PMC6546912 DOI: 10.1038/s41598-019-44637-x] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2018] [Accepted: 05/17/2019] [Indexed: 01/01/2023] Open
Abstract
Fusarium wilt disease, caused by Fusarium oxysporum f. sp. cubense, especially by tropical race 4 (Foc TR4), is threatening the global banana industry. Musa acuminata Pahang, a wild diploid banana that displays strong resistance to Foc TR4, holds great potential to understand the underlying resistance mechanisms. Microscopic examination reports that, in a wounding inoculation system, the Foc TR4 infection processes in roots of Pahang (resistant) and a triploid cultivar Brazilian (susceptible) were similar by 7 days post inoculation (dpi), but significant differences were observed in corms of both genotypes at 14 dpi. We compare transcriptomic responses in the corms of Pahang and Brazilian, and show that Pahang exhibited constitutive defense responses before Foc TR4 infection and inducible defense responses prior to Brazilian at the initial Foc TR4 infection stage. Most key enzymatic genes in the phenylalanine metabolism pathway were up-regulated in Brazilian, suggesting that lignin and phytotoxin may be triggered during later stages of Foc TR4 infection. This study unravels a few potential resistance candidate genes whose expression patterns were assessed by RT-qPCR assay and improves our understanding the defense mechanisms of Pahang response to Foc TR4.
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RNAi-mediated protection against banana diseases and pests. 3 Biotech 2019; 9:112. [PMID: 30863696 DOI: 10.1007/s13205-019-1650-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2018] [Accepted: 02/23/2019] [Indexed: 12/14/2022] Open
Abstract
Pests and pathogens restrict the production potential of many crop plants. The losses incurred due to pests and diseases are huge threatening food security. Management strategies include use of chemical pesticides which can be detrimental to human health and environment and other physical and biological methods which have serious limitations. An alternative would be to utilize the advanced technology such as RNA interference (RNAi) to engineer disease resistance in crop plants. The phenomenon of RNAi is very well studied in organisms across genera and found to be conserved. Taking advantage of this, dsRNAs have been delivered into pests and pathogens and showed significant growth inhibition. Banana is susceptible to various groups of pathogens which results in poor yield. The proof-of-principle studies using RNAi technology have already been demonstrated in banana to develop resistance to two important groups of pathogens. Transgenic banana plants expressing small interfering RNA targeting BBTV and Fusarium pathogen have shown high level of resistance. In this review, we summarize and discuss the studies utilizing RNAi as a strategy to develop resistance to major banana diseases and encourage further research in exploiting RNAi-based resistance in other crop plants.
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Dale J, James A, Paul JY, Khanna H, Smith M, Peraza-Echeverria S, Garcia-Bastidas F, Kema G, Waterhouse P, Mengersen K, Harding R. Transgenic Cavendish bananas with resistance to Fusarium wilt tropical race 4. Nat Commun 2017; 8:1496. [PMID: 29133817 PMCID: PMC5684404 DOI: 10.1038/s41467-017-01670-6] [Citation(s) in RCA: 85] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2017] [Accepted: 10/05/2017] [Indexed: 01/26/2023] Open
Abstract
Banana (Musa spp.) is a staple food for more than 400 million people. Over 40% of world production and virtually all the export trade is based on Cavendish banana. However, Cavendish banana is under threat from a virulent fungus, Fusarium oxysporum f. sp. cubense tropical race 4 (TR4) for which no acceptable resistant replacement has been identified. Here we report the identification of transgenic Cavendish with resistance to TR4. In our 3-year field trial, two lines of transgenic Cavendish, one transformed with RGA2, a gene isolated from a TR4-resistant diploid banana, and the other with a nematode-derived gene, Ced9, remain disease free. Transgene expression in the RGA2 lines is strongly correlated with resistance. Endogenous RGA2 homologs are also present in Cavendish but are expressed tenfold lower than that in our most resistant transgenic line. The expression of these homologs can potentially be elevated through gene editing, to provide non-transgenic resistance.
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Affiliation(s)
- James Dale
- Centre for Tropical Crops and Biocommodities, Queensland University of Technology, Brisbane, 4001, Queensland, Australia.
| | - Anthony James
- Centre for Tropical Crops and Biocommodities, Queensland University of Technology, Brisbane, 4001, Queensland, Australia
| | - Jean-Yves Paul
- Centre for Tropical Crops and Biocommodities, Queensland University of Technology, Brisbane, 4001, Queensland, Australia
| | - Harjeet Khanna
- Centre for Tropical Crops and Biocommodities, Queensland University of Technology, Brisbane, 4001, Queensland, Australia
- Sugar Research Australia, Indooroopilly, 4068, Queensland, Australia
| | - Mark Smith
- Darwin Banana Farming Company, Lambells Lagoon, 0822, Northern Territory, Australia
| | - Santy Peraza-Echeverria
- Centre for Tropical Crops and Biocommodities, Queensland University of Technology, Brisbane, 4001, Queensland, Australia
- Unidad de Biotecnologia Centro de Investigacion Cientifica de Yucatan, Merida, 97205, Yucatan, Mexico
| | - Fernando Garcia-Bastidas
- Wageningen University and Research Centre, Plant Research International, Wageningen, 6700, The Netherlands
| | - Gert Kema
- Wageningen University and Research Centre, Plant Research International, Wageningen, 6700, The Netherlands
| | - Peter Waterhouse
- Centre for Tropical Crops and Biocommodities, Queensland University of Technology, Brisbane, 4001, Queensland, Australia
| | - Kerrie Mengersen
- Science and Engineering Faculty, Queensland University of Technology, Brisbane, 4001, Queensland, Australia
| | - Robert Harding
- Centre for Tropical Crops and Biocommodities, Queensland University of Technology, Brisbane, 4001, Queensland, Australia
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You Q, Zhai K, Yang D, Yang W, Wu J, Liu J, Pan W, Wang J, Zhu X, Jian Y, Liu J, Zhang Y, Deng Y, Li Q, Lou Y, Xie Q, He Z. An E3 Ubiquitin Ligase-BAG Protein Module Controls Plant Innate Immunity and Broad-Spectrum Disease Resistance. Cell Host Microbe 2017; 20:758-769. [PMID: 27978435 DOI: 10.1016/j.chom.2016.10.023] [Citation(s) in RCA: 87] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2016] [Revised: 09/29/2016] [Accepted: 10/31/2016] [Indexed: 10/20/2022]
Abstract
Programmed cell death (PCD) and immunity in plants are tightly controlled to promote antimicrobial defense while preventing autoimmunity. However, the mechanisms contributing to this immune homeostasis are poorly understood. Here, we isolated a rice mutant ebr1 (enhanced blight and blast resistance 1) that shows enhanced broad-spectrum bacterial and fungal disease resistance, but displays spontaneous PCD, autoimmunity, and stunted growth. EBR1 encodes an E3 ubiquitin ligase that interacts with OsBAG4, which belongs to the BAG (Bcl-2-associated athanogene) family that functions in cell death, growth arrest, and immune responses in mammals. EBR1 directly targets OsBAG4 for ubiquitination-mediated degradation. Elevated levels of OsBAG4 in rice are necessary and sufficient to trigger PCD and enhanced disease resistance to pathogenic infection, most likely by activating pathogen-associated molecular patterns-triggered immunity (PTI). Together, our study suggests that an E3-BAG module orchestrates innate immune homeostasis and coordinates the trade-off between defense and growth in plants.
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Affiliation(s)
- Quanyuan You
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China; University of the Chinese Academy of Sciences, Beijing 100049, China
| | - Keran Zhai
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China; University of the Chinese Academy of Sciences, Beijing 100049, China
| | - Donglei Yang
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China; State Key Laboratory for Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China
| | - Weibing Yang
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China
| | - Jingni Wu
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China
| | - Junzhong Liu
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China; University of the Chinese Academy of Sciences, Beijing 100049, China
| | - Wenbo Pan
- Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
| | - Jianjun Wang
- Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China
| | - Xudong Zhu
- China National Rice Research Institute, Hangzhou 310006, China
| | - Yikun Jian
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310029, China
| | - Jiyun Liu
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China
| | - Yingying Zhang
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China
| | - Yiwen Deng
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China
| | - Qun Li
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China
| | - Yonggen Lou
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310029, China
| | - Qi Xie
- Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
| | - Zuhua He
- National Key Laboratory of Plant Molecular Genetics and National Center of Plant Gene Research, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China; Collaborative Innovation Center of Genetics and Development, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai 200032, China.
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16
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A Rapid Method with UPLC for the Determination of Fusaric Acid in Fusarium Strains and Commercial Food and Feed Products. Indian J Microbiol 2016; 57:68-74. [PMID: 28148981 DOI: 10.1007/s12088-016-0617-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2016] [Accepted: 08/16/2016] [Indexed: 10/21/2022] Open
Abstract
A rapid, sensitive and validated method for the determination of fusaric acid (FA) in several Fusarium strains and different commercial food and feed products is reported based on ultra-performance liquid chromatography. This method requires only crude sample by a simple extraction with methanol, and requires a very short time of 8 min for completion. Separation of FA was performed at injection volume of 1 μl with a 20:80 (v/v) water/acetonitrile mobile phase containing 0.1 % formic acid at a flow rate of 0.05 ml/min and detected with UV at 220 nm. Nice linearity and good correlation coefficient (R2 > 0.99) were obtained in the concentration range of 1-200 μg/ml. Validation was demonstrated using blank samples spiked at three different concentrations with standard solution, and the method yielded more than 98.2 % recovery efficiencies and below 2.56 % R.S.D. when applied in the analysis of FA produced by Fusarium verticillioides and a set of transgenic strains of this fungus. Satisfactory recoveries in the range of 79.1-105.8 % and R.S.D lower than 10 % were also obtained for the tested commercial food and feed products. The concentration FA detection in the transgenic strains ranged from 9.65 to 135 μg/kg (0.29-4.05 μg per gram of biomass). However, FA was not detected in most of the commercial products with the exception of niblet, oatmeal, red kidney bean and soybean, for which the concentrations of FA ranged from 2.5 to 18 μg/kg (below the permitted maximum). These results show that the proposed method has a great potential application to analyze FA from different sources rapidly.
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Ordonez N, Seidl MF, Waalwijk C, Drenth A, Kilian A, Thomma BPHJ, Ploetz RC, Kema GHJ. Worse Comes to Worst: Bananas and Panama Disease--When Plant and Pathogen Clones Meet. PLoS Pathog 2015; 11:e1005197. [PMID: 26584184 PMCID: PMC4652896 DOI: 10.1371/journal.ppat.1005197] [Citation(s) in RCA: 94] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/04/2022] Open
Affiliation(s)
- Nadia Ordonez
- Wageningen University and Research Center, Wageningen, The Netherlands
| | - Michael F. Seidl
- Wageningen University and Research Center, Wageningen, The Netherlands
| | - Cees Waalwijk
- Wageningen University and Research Center, Wageningen, The Netherlands
| | - André Drenth
- Centre for Plant Science, The University of Queensland, Brisbane, Australia
| | - Andrzej Kilian
- Diversity Arrays Technology, University of Canberra, Bruce, Canberra, Australia
| | | | - Randy C. Ploetz
- University of Florida, IFAS, Department of Plant Pathology, Tropical Research & Education Center, Homestead, Florida, United States of America
| | - Gert H. J. Kema
- Wageningen University and Research Center, Wageningen, The Netherlands
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18
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Ghag SB, Shekhawat UKS, Ganapathi TR. Small RNA Profiling of Two Important Cultivars of Banana and Overexpression of miRNA156 in Transgenic Banana Plants. PLoS One 2015; 10:e0127179. [PMID: 25962076 PMCID: PMC4427177 DOI: 10.1371/journal.pone.0127179] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2015] [Accepted: 04/13/2015] [Indexed: 11/17/2022] Open
Abstract
Micro RNAs (miRNAs) are a class of non-coding, short RNAs having important roles in regulation of gene expression. Although plant miRNAs have been studied in detail in some model plants, less is known about these miRNAs in important fruit plants like banana. miRNAs have pivotal roles in plant growth and development, and in responses to diverse biotic and abiotic stress stimuli. Here, we have analyzed the small RNA expression profiles of two different economically significant banana cultivars by using high-throughput sequencing technology. We identified a total of 170 and 244 miRNAs in the two libraries respectively derived from cv. Grand Naine and cv. Rasthali leaves. In addition, several cultivar specific microRNAs along with their putative target transcripts were also detected in our studies. To validate our findings regarding the small RNA profiles, we also undertook overexpression of a common microRNA, MusamiRNA156 in transgenic banana plants. The transgenic plants overexpressing the stem-loop sequence derived from MusamiRNA156 gene were stunted in their growth together with peculiar changes in leaf anatomy. These results provide a foundation for further investigations into important physiological and metabolic pathways operational in banana in general and cultivar specific traits in particular.
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Affiliation(s)
- Siddhesh B Ghag
- Plant Cell Culture Technology section, Nuclear Agriculture & Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, Maharashtra, India
| | - Upendra K S Shekhawat
- Plant Cell Culture Technology section, Nuclear Agriculture & Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, Maharashtra, India
| | - Thumballi R Ganapathi
- Plant Cell Culture Technology section, Nuclear Agriculture & Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, Maharashtra, India
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